AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0131200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0131200 MtrunA17_Chr1g0199851 97.568 658 16 0 213 870 20 677 0.0 1337
Msa0131200 MtrunA17_Chr1g0199841 86.592 179 21 1 1 176 1 179 9.82e-110 334
Msa0131200 MtrunA17_Chr3g0113261 30.266 413 214 11 492 854 192 580 9.75e-44 168
Msa0131200 MtrunA17_Chr3g0107391 30.266 413 214 12 492 854 191 579 2.81e-43 166
Msa0131200 MtrunA17_Chr3g0116881 30.966 352 205 8 532 854 214 556 3.29e-41 160
Msa0131200 MtrunA17_Chr1g0211991 30.733 423 227 11 490 866 156 558 2.24e-40 157
Msa0131200 MtrunA17_Chr1g0162011 31.250 256 106 10 80 328 71 263 1.76e-22 98.2
Msa0131200 MtrunA17_Chr4g0039031 27.083 192 135 5 669 859 360 547 5.72e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0131200 AT2G28880.1 59.190 914 326 8 1 869 1 912 0.0 1057
Msa0131200 AT2G29690.1 30.976 410 239 10 492 866 198 598 2.31e-45 173
Msa0131200 AT3G55870.1 30.446 404 230 11 490 854 74 465 1.01e-40 157
Msa0131200 AT5G05730.1 29.833 419 232 12 480 854 173 573 3.35e-40 157
Msa0131200 AT3G55870.3 30.446 404 230 11 490 854 173 564 5.02e-40 157
Msa0131200 AT5G05730.2 29.148 446 229 14 480 854 173 602 8.32e-39 154
Msa0131200 AT2G29690.2 29.747 316 196 10 492 790 198 504 2.36e-29 123
Msa0131200 AT3G55870.2 29.245 318 193 10 490 787 173 478 2.25e-25 111
Msa0131200 AT5G57890.1 31.225 253 110 9 80 328 73 265 1.11e-22 99.4
Msa0131200 AT1G25220.1 31.225 253 110 9 80 328 76 268 1.11e-22 99.4
Msa0131200 AT1G24909.1 30.830 253 111 9 80 328 22 214 6.78e-22 95.5
Msa0131200 AT1G25083.1 30.830 253 111 9 80 328 22 214 6.78e-22 95.5
Msa0131200 AT1G25155.1 30.830 253 111 9 80 328 22 214 6.78e-22 95.5
Msa0131200 AT1G25220.2 30.189 265 110 10 80 328 76 281 1.75e-20 93.2
Msa0131200 AT1G24807.1 29.811 265 111 10 80 328 22 227 8.25e-20 90.1
Msa0131200 AT1G74710.2 29.167 192 129 5 669 858 363 549 3.18e-13 73.9
Msa0131200 AT1G74710.1 28.922 204 137 6 669 870 363 560 4.47e-13 73.6
Msa0131200 AT1G18870.1 28.272 191 132 5 669 858 358 544 4.94e-13 73.2
Msa0131200 AT1G18870.2 28.272 191 132 5 669 858 308 494 6.22e-13 72.8

Find 274 sgRNAs with CRISPR-Local

Find 698 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATCGGTTTCCTTATC+TGG 0.083920 1_3:-61929892 None:intergenic
TATTCAATTCCTTGTGAAAT+TGG 0.124478 1_3:+61931300 Msa0131200:three_prime_UTR
AAATGATGATGTTTATTTAT+TGG 0.138927 1_3:+61929631 Msa0131200:CDS
AATAGGACACTTCCATTTAT+TGG 0.140688 1_3:+61926256 Msa0131200:CDS
ATCTCTTCGTATTCGTCTTC+TGG 0.192553 1_3:-61930792 None:intergenic
TGGCCATCTCACTTATTTCT+TGG 0.212055 1_3:+61931430 Msa0131200:three_prime_UTR
GAGAGATTACAGATGATTAT+TGG 0.221662 1_3:+61926617 Msa0131200:CDS
TCATCTCTTCTATATTTAAC+AGG 0.250399 1_3:-61931548 None:intergenic
CACTTATTTCTTGGGTTTAG+AGG 0.255140 1_3:+61931439 Msa0131200:three_prime_UTR
TTGCTATACCACCATTCTTT+TGG 0.255917 1_3:-61931056 None:intergenic
TGTACAACAAAAGAAATATC+TGG 0.260679 1_3:-61931644 None:intergenic
ATGCAGGGATATTCCTATTC+TGG 0.268177 1_3:+61923728 Msa0131200:CDS
GCTAGAAGCTAAGCCCATTA+AGG 0.273961 1_3:+61930057 Msa0131200:CDS
TTCTGTCAAAACAATATTCT+TGG 0.274266 1_3:+61927971 Msa0131200:CDS
TAGAAATGCAGGGGTTCTTA+TGG 0.283438 1_3:+61926399 Msa0131200:CDS
ACGAGCTATAGTACCCTTAA+TGG 0.290221 1_3:-61930071 None:intergenic
CATGTGCTTGGCAGTAATTT+TGG 0.296569 1_3:+61931197 Msa0131200:three_prime_UTR
ATTTATTGGATCCGAGGTTT+TGG 0.298084 1_3:+61926270 Msa0131200:CDS
CTATTTGAAGTCCATGCTAT+TGG 0.298195 1_3:-61926238 None:intergenic
GGCCATCTCACTTATTTCTT+GGG 0.306339 1_3:+61931431 Msa0131200:three_prime_UTR
ATTCAATTCCTTGTGAAATT+GGG 0.309485 1_3:+61931301 Msa0131200:three_prime_UTR
AAAGAAGTTAACGAGAGATT+TGG 0.311002 1_3:-61921530 None:intergenic
GACACTTCTTAACATCTCTA+AGG 0.313097 1_3:-61929823 None:intergenic
GAACTTCCGTTTCCTGCTTC+AGG 0.314406 1_3:-61926352 None:intergenic
TAGGAAATGCTCATATTTCA+TGG 0.316278 1_3:+61931869 Msa0131200:three_prime_UTR
ATACCTTCTGGTAGAAATTC+TGG 0.316634 1_3:+61924936 Msa0131200:CDS
TGATTCTCACCTATATCTTC+TGG 0.321594 1_3:-61922649 None:intergenic
AAAACCTCGGATCCAATAAA+TGG 0.325149 1_3:-61926268 None:intergenic
ATAGCAAAGATAAATTGTTT+TGG 0.326109 1_3:+61931072 Msa0131200:three_prime_UTR
CAGAATCTTCCAGTGATAAA+TGG 0.331158 1_3:-61927944 None:intergenic
TGCACGATATTCTGCTTTAG+TGG 0.331296 1_3:-61931926 None:intergenic
AGTATATTCTGTCAGTTGTT+TGG 0.333061 1_3:+61927342 Msa0131200:CDS
CTTTGCATTCCTTCTGTAAA+GGG 0.338991 1_3:-61931030 None:intergenic
TCTCTTCGTATTCGTCTTCT+GGG 0.362497 1_3:-61930791 None:intergenic
GAGAAGCTTCTGAGCTTAAC+TGG 0.362909 1_3:+61929704 Msa0131200:CDS
ACAATGGGTTCTCATCTTCC+TGG 0.363667 1_3:+61930973 Msa0131200:three_prime_UTR
CAATAGCATGGACTTCAAAT+AGG 0.365417 1_3:+61926239 Msa0131200:CDS
AGTTCAAGCCTTGTTGACTA+TGG 0.367257 1_3:+61926370 Msa0131200:CDS
ACAAAACTTTGAAGTTGAAA+TGG 0.368700 1_3:+61927277 Msa0131200:CDS
ACAAATTACAATGAAATTGT+TGG 0.377422 1_3:-61931274 None:intergenic
AACCCTTGCCAAGGAGGGTC+TGG 0.379775 1_3:-61921914 None:intergenic
TGTCTGACCATGGGCCAAAA+AGG 0.384744 1_3:-61930893 None:intergenic
TGGTAGAAATTCTGGTTTCA+AGG 0.385639 1_3:+61924944 Msa0131200:CDS
AGGAAGCTGAAAACACCTTT+TGG 0.386030 1_3:+61927367 Msa0131200:CDS
ATTGAGGTATTAAATTCTCT+TGG 0.386994 1_3:+61929908 Msa0131200:CDS
CTCAATCGGTTTCCTTATCT+GGG 0.387674 1_3:-61929891 None:intergenic
GCTATTGGAATGAGCACTTC+AGG 0.390822 1_3:-61926223 None:intergenic
TTCAAGTATTTCACAATGGT+TGG 0.390964 1_3:+61929670 Msa0131200:CDS
CCCTGAGAGGTTCCTGCAGT+TGG 0.400432 1_3:+61930021 Msa0131200:CDS
TAATCTATCACAGTGTTTGC+TGG 0.401931 1_3:-61930834 None:intergenic
TGTGTCAAAGCTGCATTTCC+TGG 0.402597 1_3:+61930564 Msa0131200:CDS
AGAGAATTTAATACCTCAAT+CGG 0.403042 1_3:-61929905 None:intergenic
TGGCAGGTTGCAACACTCTC+TGG 0.403170 1_3:-61926568 None:intergenic
ATGATTATTGGCTGAGATGT+AGG 0.404436 1_3:+61926629 Msa0131200:CDS
TTTGGAAGCAGTTAACGTTC+AGG 0.409857 1_3:+61927700 Msa0131200:CDS
CATTTGTGAGTCCAACAAAC+TGG 0.411698 1_3:-61931520 None:intergenic
TTCAAATATTGCGTGAATGC+AGG 0.416800 1_3:+61923712 Msa0131200:CDS
TTTACCTACATTTAAGAGAA+AGG 0.420459 1_3:+61929933 Msa0131200:CDS
CAAGACTTGGTCCAGTTTGT+TGG 0.421904 1_3:+61931509 Msa0131200:three_prime_UTR
CCCGTGGTTTGATAGGCATT+GGG 0.423040 1_3:+61924675 Msa0131200:intron
CCGACATGCCCAGAAGATAT+AGG 0.423801 1_3:+61922640 Msa0131200:CDS
CTAGAAGCTAAGCCCATTAA+GGG 0.423824 1_3:+61930058 Msa0131200:CDS
CTAAATGGTCATGCGTCAAT+TGG 0.424836 1_3:-61921999 None:intergenic
AATTGCCCCTCCAGCTCCTA+TGG 0.425604 1_3:-61930754 None:intergenic
TTTCCTGGTGGTTCGATGAC+AGG 0.425849 1_3:+61930579 Msa0131200:CDS
AGTTCCATTGATCTCAACTT+TGG 0.425932 1_3:-61930606 None:intergenic
TCCAACTGCAGGAACCTCTC+AGG 0.428773 1_3:-61930022 None:intergenic
TGGTTCTGTGAGGATGGATT+TGG 0.430243 1_3:+61929724 Msa0131200:CDS
ATGAAATATGAGCATTTCCT+AGG 0.433695 1_3:-61931867 None:intergenic
TTCACATACAAAATTACAAT+GGG 0.435801 1_3:+61930958 Msa0131200:three_prime_UTR
GAAAATATAAAATGATTAGT+AGG 0.439931 1_3:-61930938 None:intergenic
CCTTTGCATTCCTTCTGTAA+AGG 0.440381 1_3:-61931031 None:intergenic
GACCAAGGTCATTTCTTAGA+AGG 0.440815 1_3:-61930419 None:intergenic
CCTATTCTGGGTGTTTGCCT+CGG 0.440882 1_3:+61923741 Msa0131200:CDS
TGTCCAGACCCTCCTTGGCA+AGG 0.442463 1_3:+61921911 Msa0131200:CDS
GGTAATGAAATGAAGGATCT+TGG 0.443498 1_3:-61921452 None:intergenic
TGCAGGGATATTCCTATTCT+GGG 0.444432 1_3:+61923729 Msa0131200:CDS
TACCTCAGACGCCCGTGAAC+TGG 0.444477 1_3:-61924735 None:intergenic
AGGAAATATGATCACTTGGC+TGG 0.445435 1_3:+61927300 Msa0131200:CDS
CACAAATAGATACGTTAATA+CGG 0.445771 1_3:-61931378 None:intergenic
TTAGAAGGTCAACAATCATC+AGG 0.447823 1_3:-61930404 None:intergenic
GATTCCTTTCTCTTAAATGT+AGG 0.447911 1_3:-61929937 None:intergenic
AGTATATAGCGATGCCGATT+GGG 0.448301 1_3:+61931796 Msa0131200:three_prime_UTR
CTTGGTCGTGTATGTGATCC+TGG 0.449044 1_3:+61930435 Msa0131200:CDS
GACACAAGAAAATCTACTAC+TGG 0.449695 1_3:+61931832 Msa0131200:three_prime_UTR
TATAGTGATGGGAGTTCAAA+AGG 0.451018 1_3:+61927915 Msa0131200:intron
AGAATTGCCTCTACAGAAGC+AGG 0.451458 1_3:+61922050 Msa0131200:CDS
CGAGCTATAGTACCCTTAAT+GGG 0.451531 1_3:-61930070 None:intergenic
GATTCTCACCTATATCTTCT+GGG 0.451656 1_3:-61922648 None:intergenic
CAAATACACAGATCTTCCTT+TGG 0.452881 1_3:-61929989 None:intergenic
AAAATGATTAGTAGGACAAA+AGG 0.454064 1_3:-61930930 None:intergenic
GTCCAGACCCTCCTTGGCAA+GGG 0.458237 1_3:+61921912 Msa0131200:CDS
GGCATCTACTCAGGCTGCAT+TGG 0.460246 1_3:+61930657 Msa0131200:CDS
AGCGGGTGGTAGTGAAGAAC+TGG 0.460982 1_3:-61921409 None:intergenic
GAATATTTGACTTCCGTGGC+AGG 0.463423 1_3:-61926584 None:intergenic
CAGGACCTATCTATTATTAA+CGG 0.464286 1_3:+61922129 Msa0131200:CDS
TGACACCACATTCAACTTTG+AGG 0.465437 1_3:-61929532 None:intergenic
AGAAATGCAGGGGTTCTTAT+GGG 0.469281 1_3:+61926400 Msa0131200:CDS
TGTTGACGTGCCGCATCTCA+TGG 0.470293 1_3:+61930461 Msa0131200:CDS
TGCGGCACGTCAACAGATCC+AGG 0.484263 1_3:-61930453 None:intergenic
TATTTATTTATGCATGTGCT+TGG 0.484763 1_3:+61931185 Msa0131200:three_prime_UTR
CTTAACTGGTTCTGTGAGGA+TGG 0.485235 1_3:+61929718 Msa0131200:CDS
AAATTCAGCCAAGCCGCATA+AGG 0.485476 1_3:-61929965 None:intergenic
AAGTATATAGCGATGCCGAT+TGG 0.491106 1_3:+61931795 Msa0131200:three_prime_UTR
TTCATTGTACTGTTGAAAGA+TGG 0.491796 1_3:-61931703 None:intergenic
AGCCAAGCCGCATAAGGTGC+TGG 0.493373 1_3:-61929959 None:intergenic
TCAAATTGAAATTACAGCTC+AGG 0.495889 1_3:+61930122 Msa0131200:CDS
CCGAGGCAAACACCCAGAAT+AGG 0.495918 1_3:-61923741 None:intergenic
GTGTGCTTACAAGCTTGATT+TGG 0.495951 1_3:+61931145 Msa0131200:three_prime_UTR
CACTTGGCTGGGCAAGTTGG+TGG 0.497533 1_3:+61927312 Msa0131200:CDS
CTGTGTCACGAGAAATATCT+TGG 0.499662 1_3:+61931410 Msa0131200:three_prime_UTR
CGCACCAAAGTTGAGATCAA+TGG 0.499946 1_3:+61930602 Msa0131200:CDS
GCTTCAGTCATAACATATCC+AGG 0.500944 1_3:-61930991 None:intergenic
TCAATCATATCGTTATGATA+AGG 0.501529 1_3:+61928783 Msa0131200:CDS
CATTCTACAAGGCCACACTA+TGG 0.502130 1_3:+61926430 Msa0131200:CDS
TTCAATTCCTTGTGAAATTG+GGG 0.505766 1_3:+61931302 Msa0131200:three_prime_UTR
TCTGGGCATGTCGGAGAACC+AGG 0.506097 1_3:-61922631 None:intergenic
GGGTGTTTGCCTCGGACACC+AGG 0.507562 1_3:+61923749 Msa0131200:CDS
ATTCTGTCAGTTGTTTGGAC+AGG 0.509319 1_3:+61927347 Msa0131200:CDS
TCTCACTCAATATCGCAAAC+TGG 0.510459 1_3:+61931589 Msa0131200:three_prime_UTR
CATGTCGGAGAACCAGGTCC+AGG 0.511217 1_3:-61922625 None:intergenic
AGAGGTTCCTGCAGTTGGAT+AGG 0.511649 1_3:+61930026 Msa0131200:CDS
ATCCAGCACCTTATGCGGCT+TGG 0.512005 1_3:+61929957 Msa0131200:CDS
GTTAAATATAGAAGAGATGA+AGG 0.516715 1_3:+61931551 Msa0131200:three_prime_UTR
CATCTCTTCTATATTTAACA+GGG 0.517124 1_3:-61931547 None:intergenic
TATCCGCCGTGAAAATCAAA+TGG 0.517625 1_3:-61928823 None:intergenic
ACTGGATGGTGTATGTTCCT+AGG 0.521450 1_3:+61931850 Msa0131200:three_prime_UTR
TATGGACAAACTAGAAATGC+AGG 0.525839 1_3:+61926388 Msa0131200:CDS
TGGTGATTCAAAATGATGAT+TGG 0.526558 1_3:+61922539 Msa0131200:CDS
GGTGAAGCTTCCATAGGAGC+TGG 0.526688 1_3:+61930744 Msa0131200:CDS
GCGGATATGTTGGTTACATC+GGG 0.526889 1_3:+61928839 Msa0131200:CDS
TGGCTTAGATATTCAGAGGA+AGG 0.534560 1_3:-61921510 None:intergenic
TTGTTGTACACACAGTTGGT+AGG 0.535722 1_3:+61931657 Msa0131200:three_prime_UTR
TTGATTGTCTTCTTTCCACA+TGG 0.536982 1_3:+61931336 Msa0131200:three_prime_UTR
AATAGCATGAATGCGCGAAA+GGG 0.537276 1_3:-61921487 None:intergenic
GACATATGAAACGCAAAGAC+AGG 0.538961 1_3:-61921855 None:intergenic
GTCAAAACAATATTCTTGGA+AGG 0.539340 1_3:+61927975 Msa0131200:CDS
GGATAGTTCTTCCACAGAGA+TGG 0.539959 1_3:+61927392 Msa0131200:CDS
GCGAGAGGGTAATGAAATGA+AGG 0.540217 1_3:-61921459 None:intergenic
TCAAATATTGCGTGAATGCA+GGG 0.540876 1_3:+61923713 Msa0131200:CDS
CGTTAATAATAGATAGGTCC+TGG 0.541535 1_3:-61922128 None:intergenic
CTGGACAGCCACAACCCAAT+CGG 0.542424 1_3:-61931810 None:intergenic
AAATCATTGTTGTCTGACCA+TGG 0.543050 1_3:-61930903 None:intergenic
CACTCAATATCGCAAACTGG+TGG 0.543699 1_3:+61931592 Msa0131200:three_prime_UTR
GAGGAAAAGGTGGATCACTT+TGG 0.543864 1_3:+61927682 Msa0131200:CDS
GGAAATATGATCACTTGGCT+GGG 0.544906 1_3:+61927301 Msa0131200:CDS
CGTGAACTGGTTCAGATGCA+TGG 0.546538 1_3:-61924722 None:intergenic
CATGCATCTGAACCAGTTCA+CGG 0.547761 1_3:+61924723 Msa0131200:CDS
AGATGCGAACAAAGATCCAT+TGG 0.548006 1_3:-61921592 None:intergenic
TGATTATTGGCTGAGATGTA+GGG 0.548614 1_3:+61926630 Msa0131200:CDS
CCTATATCTTCTGGGCATGT+CGG 0.548738 1_3:-61922640 None:intergenic
TGTCTAAACTATATTAGAGA+TGG 0.549780 1_3:+61929842 Msa0131200:CDS
TACCACCGTTAATAATAGAT+AGG 0.551799 1_3:-61922134 None:intergenic
AAGTTTGATTGATGAACCAA+TGG 0.552226 1_3:-61931771 None:intergenic
GTACAACAAAAGAAATATCT+GGG 0.552962 1_3:-61931643 None:intergenic
TAGCGATGCCGATTGGGTTG+TGG 0.553014 1_3:+61931802 Msa0131200:three_prime_UTR
GGAAAACGTGCTAATTCTGA+TGG 0.553406 1_3:+61926667 Msa0131200:CDS
GGAAGAACTATCCAACCAAA+AGG 0.553464 1_3:-61927382 None:intergenic
GATCACTTGGCTGGGCAAGT+TGG 0.554891 1_3:+61927309 Msa0131200:CDS
ATGCATCTGAACCAGTTCAC+GGG 0.555574 1_3:+61924724 Msa0131200:CDS
GAGAGTGTTGCAACCTGCCA+CGG 0.555850 1_3:+61926571 Msa0131200:CDS
TGTGCCTCACAACCCAGATA+AGG 0.555986 1_3:+61929879 Msa0131200:CDS
CCAACTGCAGGAACCTCTCA+GGG 0.556382 1_3:-61930021 None:intergenic
AAAACAATATTCTTGGAAGG+AGG 0.557570 1_3:+61927978 Msa0131200:CDS
CAACAGTTGCCCTTTACAGA+AGG 0.558369 1_3:+61931021 Msa0131200:three_prime_UTR
GGCGGATATGTTGGTTACAT+CGG 0.559365 1_3:+61928838 Msa0131200:CDS
GAATAGCATGAATGCGCGAA+AGG 0.560571 1_3:-61921488 None:intergenic
AACCCAAGAAATAAGTGAGA+TGG 0.561136 1_3:-61931433 None:intergenic
CGTTCAGGTTGTCTGATCAG+AGG 0.561324 1_3:+61927715 Msa0131200:CDS
AGGTGGTGGCCATTTATCAC+TGG 0.563009 1_3:+61927935 Msa0131200:CDS
CTGTGAGGATGGATTTGGAA+AGG 0.565191 1_3:+61929729 Msa0131200:CDS
TGTTCTCGAGGCATCTACTC+AGG 0.566022 1_3:+61930648 Msa0131200:CDS
GCAGTGAAGTTGAGCACAAT+GGG 0.566135 1_3:+61924895 Msa0131200:intron
TCGTTCATGGGAGGAAAAGG+TGG 0.567570 1_3:+61927672 Msa0131200:CDS
CCAGATAAGGAAACCGATTG+AGG 0.569130 1_3:+61929892 Msa0131200:CDS
TTTCACATACAAAATTACAA+TGG 0.569237 1_3:+61930957 Msa0131200:three_prime_UTR
ACAAAAGTATATTCAAGACT+TGG 0.570604 1_3:+61931496 Msa0131200:three_prime_UTR
AAACCAGAATTTCTACCAGA+AGG 0.570639 1_3:-61924939 None:intergenic
ATGCAAAGGATCCAAAAGAA+TGG 0.571088 1_3:+61931045 Msa0131200:three_prime_UTR
AACCAGTTCACGGGCGTCTG+AGG 0.571689 1_3:+61924733 Msa0131200:CDS
AAGTGCTCATTCCAATAGCA+TGG 0.571695 1_3:+61926227 Msa0131200:CDS
TCTCTTGAAAGTTGTTCTCG+AGG 0.572344 1_3:+61930636 Msa0131200:CDS
AAGGCCACACTATGGTGTGC+AGG 0.572554 1_3:+61926438 Msa0131200:CDS
TATGATAAGGATGAATATGA+AGG 0.576693 1_3:+61928796 Msa0131200:CDS
AGATCCATTGGCAAATCACG+TGG 0.578652 1_3:-61921580 None:intergenic
AAACTTTGAAGTTGAAATGG+AGG 0.579267 1_3:+61927280 Msa0131200:CDS
GATGTATGTAATCGCCGCGA+TGG 0.582991 1_3:+61921955 Msa0131200:CDS
AGCTTCCATAGGAGCTGGAG+GGG 0.583104 1_3:+61930749 Msa0131200:CDS
GCGCCTGTCATCGAACCACC+AGG 0.583166 1_3:-61930582 None:intergenic
TTTGCTGTTCTTCCCCTGAG+AGG 0.583316 1_3:+61930008 Msa0131200:CDS
TGGCGGTGTAGATTCGAAGC+GGG 0.583842 1_3:-61921426 None:intergenic
AATCATTGTTGTCTGACCAT+GGG 0.587849 1_3:-61930902 None:intergenic
TATCACTCCTATCCAACTGC+AGG 0.588529 1_3:-61930033 None:intergenic
ACAAAACCCTGCTTCTGTAG+AGG 0.589098 1_3:-61922057 None:intergenic
TGAATCATTAGATACCTCCT+TGG 0.590062 1_3:+61931722 Msa0131200:three_prime_UTR
GATTTGGCTTAGATATTCAG+AGG 0.590421 1_3:-61921514 None:intergenic
TCTTGAATATTTGACTTCCG+TGG 0.593391 1_3:-61926588 None:intergenic
GGTGGTTCGATATCATTCGC+TGG 0.593671 1_3:+61926180 Msa0131200:intron
ACTTCCATTTATTGGATCCG+AGG 0.593929 1_3:+61926264 Msa0131200:CDS
TTATCACTGGAAGATTCTGA+AGG 0.594083 1_3:+61927948 Msa0131200:CDS
CAAGAAAATCTACTACTGGA+TGG 0.594774 1_3:+61931836 Msa0131200:three_prime_UTR
CTCCTTGGCACCCCAAAGCG+TGG 0.595100 1_3:+61931737 Msa0131200:three_prime_UTR
AAGAACAGTTGTTATACATG+AGG 0.596678 1_3:+61930722 Msa0131200:CDS
GTTTCCTTATCTGGGTTGTG+AGG 0.596872 1_3:-61929883 None:intergenic
ACTTTCTTTAGCACATGCGC+AGG 0.598971 1_3:+61927197 Msa0131200:intron
TTCAAAATGATGATTGGACG+TGG 0.599788 1_3:+61922545 Msa0131200:CDS
AACCACGCTTTGGGGTGCCA+AGG 0.600322 1_3:-61931739 None:intergenic
TAGTTTGTCCATAGTCAACA+AGG 0.602079 1_3:-61926378 None:intergenic
TAGGCATTGGGTTATGTGCA+TGG 0.603761 1_3:+61924687 Msa0131200:intron
AGCTCGTGGTGCTACTGAGG+AGG 0.604636 1_3:+61930087 Msa0131200:CDS
GATGGGAGTTCAAAAGGTGG+TGG 0.606255 1_3:+61927921 Msa0131200:CDS
CGCGAAAGGGCATTAGCGAG+AGG 0.607101 1_3:-61921474 None:intergenic
GACCTTCTAAGAAATGACCT+TGG 0.607144 1_3:+61930417 Msa0131200:CDS
TCTCCCACGTGATTTGCCAA+TGG 0.607949 1_3:+61921576 Msa0131200:five_prime_UTR
ATGGAGGAAATATGATCACT+TGG 0.608161 1_3:+61927296 Msa0131200:CDS
CATGAGGGTGAAGCTTCCAT+AGG 0.610810 1_3:+61930738 Msa0131200:CDS
CAAATGTCCCCAATTTCACA+AGG 0.611101 1_3:-61931309 None:intergenic
AGTTGCAGATTCAAGATGTG+AGG 0.612054 1_3:-61921618 None:intergenic
AGTGATGGGAGTTCAAAAGG+TGG 0.612943 1_3:+61927918 Msa0131200:intron
GAAATGAAGGATCTTGGTTG+TGG 0.614567 1_3:-61921446 None:intergenic
CAATGGTGAGTACAATTCGT+GGG 0.615391 1_3:+61930511 Msa0131200:CDS
CAAGAAACCCTTGCCAAGGA+GGG 0.615672 1_3:-61921919 None:intergenic
ATCTCTTCTATATTTAACAG+GGG 0.616580 1_3:-61931546 None:intergenic
GCGAAAGGGCATTAGCGAGA+GGG 0.619844 1_3:-61921473 None:intergenic
ACAATGGTGAGTACAATTCG+TGG 0.620395 1_3:+61930510 Msa0131200:CDS
GATAACATCGTATTATCACC+TGG 0.621106 1_3:+61922607 Msa0131200:CDS
AAAGTTCAAGTATTTCACAA+TGG 0.623372 1_3:+61929666 Msa0131200:CDS
TATAGCTCGTGGTGCTACTG+AGG 0.623391 1_3:+61930084 Msa0131200:CDS
ACAAGAAACCCTTGCCAAGG+AGG 0.625497 1_3:-61921920 None:intergenic
GAAGCTTCCATAGGAGCTGG+AGG 0.628682 1_3:+61930747 Msa0131200:CDS
ACTCAATATCGCAAACTGGT+GGG 0.629284 1_3:+61931593 Msa0131200:three_prime_UTR
GTCAAAGCTGCATTTCCTGG+TGG 0.629738 1_3:+61930567 Msa0131200:CDS
GAAACAAGAAACCCTTGCCA+AGG 0.630796 1_3:-61921923 None:intergenic
GAATTGCCTCTACAGAAGCA+GGG 0.631218 1_3:+61922051 Msa0131200:CDS
AGAACAGTTGTTATACATGA+GGG 0.631663 1_3:+61930723 Msa0131200:CDS
AAGGAATCCAGCACCTTATG+CGG 0.632251 1_3:+61929952 Msa0131200:CDS
CACGCTTTGGGGTGCCAAGG+AGG 0.632820 1_3:-61931736 None:intergenic
CGGTGTAGATTCGAAGCGGG+TGG 0.633771 1_3:-61921423 None:intergenic
AGGGAAATACCTGGTGTCCG+AGG 0.634630 1_3:-61923758 None:intergenic
CAAAGGATCCAAAAGAATGG+TGG 0.638306 1_3:+61931048 Msa0131200:three_prime_UTR
AAGCTTCCATAGGAGCTGGA+GGG 0.638739 1_3:+61930748 Msa0131200:CDS
TGGGAGTCAAGCATTCTACA+AGG 0.640874 1_3:+61926419 Msa0131200:CDS
AACACCTGCACACCATAGTG+TGG 0.641639 1_3:-61926442 None:intergenic
ACAATGGTTGGATGATACTG+AGG 0.643513 1_3:+61929682 Msa0131200:CDS
CGCTCGTGTTTCTTCCATCG+CGG 0.643637 1_3:-61921969 None:intergenic
AGTTTGATTGATGAACCAAT+GGG 0.646801 1_3:-61931770 None:intergenic
ATGGACAAACTAGAAATGCA+GGG 0.648256 1_3:+61926389 Msa0131200:CDS
TTTCAGTGAAAAGGATCAGG+CGG 0.648387 1_3:+61930377 Msa0131200:intron
ATCGTATTATCACCTGGACC+TGG 0.649380 1_3:+61922613 Msa0131200:CDS
ATTGAGTGAGATCATCGAGA+AGG 0.650885 1_3:-61931577 None:intergenic
CCTTTACAGAAGGAATGCAA+AGG 0.651964 1_3:+61931031 Msa0131200:three_prime_UTR
ATTGTACTTGTCCAAAACCT+CGG 0.653172 1_3:-61926281 None:intergenic
ATGTAGGGCATCATACAACA+AGG 0.653248 1_3:+61926645 Msa0131200:CDS
TGCAGTGAAGTTGAGCACAA+TGG 0.654882 1_3:+61924894 Msa0131200:intron
ATGAAGGATCTTGGTTGTGG+CGG 0.658564 1_3:-61921443 None:intergenic
GTGGCGGTGTAGATTCGAAG+CGG 0.660015 1_3:-61921427 None:intergenic
TGAGCTTAACTGGTTCTGTG+AGG 0.664892 1_3:+61929714 Msa0131200:CDS
ATATGCAACTGTTCACACAA+TGG 0.665606 1_3:+61930494 Msa0131200:CDS
ATTAAGGGTACTATAGCTCG+TGG 0.669637 1_3:+61930073 Msa0131200:CDS
GATTGTACTTCCATGAGATG+CGG 0.673089 1_3:-61930471 None:intergenic
TCATATAGATACCATCTCTG+TGG 0.674627 1_3:-61927403 None:intergenic
TGCGAAACCAGCCTTATGTG+AGG 0.675505 1_3:-61929777 None:intergenic
GTTGAAAGATGGAAATGTCG+TGG 0.675819 1_3:-61931692 None:intergenic
GACCTATCTATTATTAACGG+TGG 0.686149 1_3:+61922132 Msa0131200:CDS
TTATACATACAATATATACC+AGG 0.694546 1_3:+61922110 Msa0131200:CDS
TGGACAAACTAGAAATGCAG+GGG 0.701563 1_3:+61926390 Msa0131200:CDS
AACACATTGCAGAAACCATG+TGG 0.706418 1_3:-61931351 None:intergenic
TTTAGTACATAATAATACTG+AGG 0.714422 1_3:+61927248 Msa0131200:CDS
CAACTGCAGGAACCTCTCAG+GGG 0.714797 1_3:-61930020 None:intergenic
CAGGATCACATACACGACCA+AGG 0.715599 1_3:-61930434 None:intergenic
TATGACCTCAAAGTTGAATG+TGG 0.722703 1_3:+61929527 Msa0131200:CDS
TGTAGGGCATCATACAACAA+GGG 0.725500 1_3:+61926646 Msa0131200:CDS
TCAAAATGATGATTGGACGT+GGG 0.727524 1_3:+61922546 Msa0131200:CDS
GATCCATTGGCAAATCACGT+GGG 0.738660 1_3:-61921579 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTAAATAATTTATGTATT+TGG + chr1_3:61926795-61926814 Msa0131200:intron 10.0%
!! GATGATAAGTATAATAAATT+CGG - chr1_3:61921709-61921728 None:intergenic 15.0%
!!! TTTTATATGATTCTTCTAAA+TGG - chr1_3:61922017-61922036 None:intergenic 15.0%
!!! ATTTTGGATTAGTTTATTTA+TGG + chr1_3:61922241-61922260 Msa0131200:intron 15.0%
!!! TGTTAAAAAAATAGTTTTTG+AGG - chr1_3:61923186-61923205 None:intergenic 15.0%
!! CTTGTAAGAAATATAAAATT+AGG - chr1_3:61923419-61923438 None:intergenic 15.0%
!! TAAAATCATTTGAAGAAAAA+AGG - chr1_3:61923673-61923692 None:intergenic 15.0%
!! TTTAATACAATTTATGAAGA+TGG + chr1_3:61924033-61924052 Msa0131200:intron 15.0%
!! GTATTATGTTTGTATTTAAA+AGG - chr1_3:61924071-61924090 None:intergenic 15.0%
!! AAACATAAAACTCATTTATA+TGG + chr1_3:61924269-61924288 Msa0131200:intron 15.0%
!! AACATAAAACTCATTTATAT+GGG + chr1_3:61924270-61924289 Msa0131200:intron 15.0%
!! AACAAAAAATTTAAGTCAAA+GGG - chr1_3:61924369-61924388 None:intergenic 15.0%
!! AAACAAAAAATTTAAGTCAA+AGG - chr1_3:61924370-61924389 None:intergenic 15.0%
!! TAATATTAAAAATTGGATTG+TGG - chr1_3:61924509-61924528 None:intergenic 15.0%
!! AGTTAAAACTATAAATGAAA+GGG - chr1_3:61924860-61924879 None:intergenic 15.0%
!! TAGTTAAAACTATAAATGAA+AGG - chr1_3:61924861-61924880 None:intergenic 15.0%
!!! TCGAACATTTTTAAAAAATT+TGG + chr1_3:61925010-61925029 Msa0131200:intron 15.0%
!!! TTTTGTTTGGATAAATTTTA+GGG - chr1_3:61925901-61925920 None:intergenic 15.0%
!!! ATTTTGTTTGGATAAATTTT+AGG - chr1_3:61925902-61925921 None:intergenic 15.0%
!!! ATAATTTATGTATTTGGTTT+AGG + chr1_3:61926801-61926820 Msa0131200:intron 15.0%
!!! GTTTTATTACAAATTTCAAT+TGG + chr1_3:61927128-61927147 Msa0131200:intron 15.0%
!!! ATAAAAAAAGTATCGTAATT+GGG - chr1_3:61928669-61928688 None:intergenic 15.0%
!!! AATAAAAAAAGTATCGTAAT+TGG - chr1_3:61928670-61928689 None:intergenic 15.0%
!!! AAATGATGATGTTTATTTAT+TGG + chr1_3:61929631-61929650 Msa0131200:CDS 15.0%
!!! TATTTGATAATTCAGTAATT+TGG + chr1_3:61930274-61930293 Msa0131200:intron 15.0%
!! GAAAATATAAAATGATTAGT+AGG - chr1_3:61930941-61930960 None:intergenic 15.0%
!! TTATACATACAATATATACC+AGG + chr1_3:61922110-61922129 Msa0131200:CDS 20.0%
!! TTTATTTATGGTCAATCATT+GGG + chr1_3:61922253-61922272 Msa0131200:intron 20.0%
!! AAAACTATAATATTCTGTAC+GGG - chr1_3:61922432-61922451 None:intergenic 20.0%
!! CAAAACTATAATATTCTGTA+CGG - chr1_3:61922433-61922452 None:intergenic 20.0%
!! TTAAACATCAAAATTCACAA+TGG - chr1_3:61922863-61922882 None:intergenic 20.0%
!! TTAACTCTTATGATCAAATT+TGG + chr1_3:61923006-61923025 Msa0131200:intron 20.0%
!! AACAAATAAATCAACACTTT+AGG + chr1_3:61923158-61923177 Msa0131200:intron 20.0%
!! CAAATTCTTCAAAATATATG+AGG - chr1_3:61923576-61923595 None:intergenic 20.0%
!!! ACAATTTTGAATAAAGAAGA+GGG - chr1_3:61923780-61923799 None:intergenic 20.0%
!!! TACAATTTTGAATAAAGAAG+AGG - chr1_3:61923781-61923800 None:intergenic 20.0%
!! TTAAATTGTATTGGGAAAAA+GGG - chr1_3:61923804-61923823 None:intergenic 20.0%
!!! TCTACTTTTTTAGAAGATTA+CGG + chr1_3:61923863-61923882 Msa0131200:intron 20.0%
!! ACACAATTTGCAAAATTAAA+AGG - chr1_3:61923892-61923911 None:intergenic 20.0%
!!! CTTAATAGTTCATTTTTCTT+TGG + chr1_3:61923996-61924015 Msa0131200:intron 20.0%
!!! CTTCCAAATATGTTTTTATT+GGG - chr1_3:61924245-61924264 None:intergenic 20.0%
!! ACATAAAACTCATTTATATG+GGG + chr1_3:61924271-61924290 Msa0131200:intron 20.0%
!!! AATTTTTTGTTTCTTTGAGA+AGG + chr1_3:61924378-61924397 Msa0131200:intron 20.0%
!! ACAAAACTTAAACAATAGTT+AGG - chr1_3:61924622-61924641 None:intergenic 20.0%
!!! TGTACATTTAATTTTTTCCT+TGG + chr1_3:61924641-61924660 Msa0131200:intron 20.0%
!! GTTAAAACTATAAATGAAAG+GGG - chr1_3:61924859-61924878 None:intergenic 20.0%
!! GAACGAAAAAATAATGTATT+AGG - chr1_3:61925579-61925598 None:intergenic 20.0%
!! TAAAATTTGAATTGATCAAG+AGG - chr1_3:61925851-61925870 None:intergenic 20.0%
!!! TACAGAAAAGATATTTTGTT+TGG - chr1_3:61925914-61925933 None:intergenic 20.0%
!! GAAATACATACTATAGTAAA+GGG - chr1_3:61925941-61925960 None:intergenic 20.0%
!! TGAAATACATACTATAGTAA+AGG - chr1_3:61925942-61925961 None:intergenic 20.0%
!! AAATCCGAAAAAATTACATA+TGG + chr1_3:61925981-61926000 Msa0131200:intron 20.0%
!! CAAACAATTATTATGATTAG+TGG - chr1_3:61926148-61926167 None:intergenic 20.0%
!! AAATTATTTGATAAGCACAT+AGG - chr1_3:61926923-61926942 None:intergenic 20.0%
!! ATTTATACCGAAATAATTTG+TGG + chr1_3:61926939-61926958 Msa0131200:intron 20.0%
!!! TTTATACCGAAATAATTTGT+GGG + chr1_3:61926940-61926959 Msa0131200:intron 20.0%
!!! AAACCATTTTCTCATTTATA+AGG - chr1_3:61926995-61927014 None:intergenic 20.0%
!! TTTAGTACATAATAATACTG+AGG + chr1_3:61927248-61927267 Msa0131200:CDS 20.0%
!!! GATACACATATTTTTACATT+TGG + chr1_3:61927525-61927544 Msa0131200:intron 20.0%
!!! TTTTCTTGATTATTTGAACA+AGG + chr1_3:61928001-61928020 Msa0131200:CDS 20.0%
!! ATCTAATTTCTATTGTTACT+TGG + chr1_3:61928316-61928335 Msa0131200:intron 20.0%
!! AAAACATTCAAAGTAATACA+TGG - chr1_3:61928476-61928495 None:intergenic 20.0%
!! ATTCAATGTAAGCATTTATT+TGG - chr1_3:61928881-61928900 None:intergenic 20.0%
!! ACTGAATTATCAAATATACT+TGG - chr1_3:61930270-61930289 None:intergenic 20.0%
!!! ACCATTAATTTTTTCCTTTT+TGG + chr1_3:61930879-61930898 Msa0131200:three_prime_UTR 20.0%
!! TTTCACATACAAAATTACAA+TGG + chr1_3:61930957-61930976 Msa0131200:three_prime_UTR 20.0%
!! TTCACATACAAAATTACAAT+GGG + chr1_3:61930958-61930977 Msa0131200:three_prime_UTR 20.0%
!!! ATAGCAAAGATAAATTGTTT+TGG + chr1_3:61931072-61931091 Msa0131200:three_prime_UTR 20.0%
!!! TAGCAAAGATAAATTGTTTT+GGG + chr1_3:61931073-61931092 Msa0131200:three_prime_UTR 20.0%
!! ACAAATTACAATGAAATTGT+TGG - chr1_3:61931277-61931296 None:intergenic 20.0%
!! ACATTTTTGTATTCACTTGT+AGG - chr1_3:61921880-61921899 None:intergenic 25.0%
! GTTTATTTATGGTCAATCAT+TGG + chr1_3:61922252-61922271 Msa0131200:intron 25.0%
! TTGTTCTACATATAAGAGTT+AGG + chr1_3:61922331-61922350 Msa0131200:intron 25.0%
! TACAAGTAAGAATATCAAGA+TGG + chr1_3:61922355-61922374 Msa0131200:intron 25.0%
!! CGTACAGAATATTATAGTTT+TGG + chr1_3:61922431-61922450 Msa0131200:intron 25.0%
!!! ATTTTTTCTATTGCTTCTTC+AGG - chr1_3:61922716-61922735 None:intergenic 25.0%
! CTTTAAATGGGATAAAAACA+TGG - chr1_3:61922786-61922805 None:intergenic 25.0%
! CAATCTTAAAACAACAACAA+AGG + chr1_3:61923111-61923130 Msa0131200:intron 25.0%
! TCTAGTGATAAAAGTTAATC+AGG - chr1_3:61923292-61923311 None:intergenic 25.0%
! ATACTCTTCAATATTCTCAT+CGG + chr1_3:61923453-61923472 Msa0131200:intron 25.0%
! AGTTATACTTACAATTCATG+TGG - chr1_3:61923527-61923546 None:intergenic 25.0%
!!! TTGTTGTTTAATGAAATGTG+TGG + chr1_3:61923627-61923646 Msa0131200:intron 25.0%
!! CAAATGATTTTATATGCTTC+AGG + chr1_3:61923681-61923700 Msa0131200:intron 25.0%
! GTTAAATTGTATTGGGAAAA+AGG - chr1_3:61923805-61923824 None:intergenic 25.0%
! GAAAGTGGTTAAATTGTATT+GGG - chr1_3:61923812-61923831 None:intergenic 25.0%
! AGAAAGTGGTTAAATTGTAT+TGG - chr1_3:61923813-61923832 None:intergenic 25.0%
! AATACAATTTAACCACTTTC+TGG + chr1_3:61923812-61923831 Msa0131200:intron 25.0%
!!! CATAATACTTTTGTTTGCTT+CGG + chr1_3:61924083-61924102 Msa0131200:intron 25.0%
! TTAAATGCACTGTTGAAAAT+GGG - chr1_3:61924167-61924186 None:intergenic 25.0%
! ATTAAATGCACTGTTGAAAA+TGG - chr1_3:61924168-61924187 None:intergenic 25.0%
! TAAACACTGTTCACAAAAAT+GGG - chr1_3:61924211-61924230 None:intergenic 25.0%
! GAACCCAATAAAAACATATT+TGG + chr1_3:61924239-61924258 Msa0131200:intron 25.0%
!!! CCTTCCAAATATGTTTTTAT+TGG - chr1_3:61924246-61924265 None:intergenic 25.0%
! CCAATAAAAACATATTTGGA+AGG + chr1_3:61924243-61924262 Msa0131200:intron 25.0%
! ATAACTTTACGCATATCTTA+TGG - chr1_3:61924300-61924319 None:intergenic 25.0%
! TTAAAAATTGGATTGTGGAT+AGG - chr1_3:61924504-61924523 None:intergenic 25.0%
!! ATTCATATTTGAGACATACA+AGG + chr1_3:61925073-61925092 Msa0131200:intron 25.0%
! ACTAAGTTGTATGAAAATCT+TGG + chr1_3:61925169-61925188 Msa0131200:intron 25.0%
!! ATTCTGAATTTTCTTTGACT+TGG + chr1_3:61925195-61925214 Msa0131200:intron 25.0%
!!! TTCTGAATTTTCTTTGACTT+GGG + chr1_3:61925196-61925215 Msa0131200:intron 25.0%
!! GGAAAATATTTTCTTAACAG+AGG + chr1_3:61925217-61925236 Msa0131200:intron 25.0%
! TTATTCTTGTGACTCTTTAA+TGG + chr1_3:61925419-61925438 Msa0131200:intron 25.0%
! TATTCTTGTGACTCTTTAAT+GGG + chr1_3:61925420-61925439 Msa0131200:intron 25.0%
!! AGTGTTTCTTATATTTTCCA+AGG + chr1_3:61925662-61925681 Msa0131200:intron 25.0%
!! GTGTTTCTTATATTTTCCAA+GGG + chr1_3:61925663-61925682 Msa0131200:intron 25.0%
!!! AATTTTAGGGTTTCTAGAAA+TGG - chr1_3:61925888-61925907 None:intergenic 25.0%
!! TACATGTTTTACATGAATGA+TGG - chr1_3:61926024-61926043 None:intergenic 25.0%
! ACAATTATTATGATTAGTGG+TGG - chr1_3:61926145-61926164 None:intergenic 25.0%
!!! CAAATTTGTTGACATAAACA+TGG - chr1_3:61926534-61926553 None:intergenic 25.0%
! GTAAATTGTCTCTTGTAAAT+AGG - chr1_3:61926765-61926784 None:intergenic 25.0%
! CATTAACCCACAAATTATTT+CGG - chr1_3:61926949-61926968 None:intergenic 25.0%
! TGACCTTATAAATGAGAAAA+TGG + chr1_3:61926989-61927008 Msa0131200:intron 25.0%
!!! ACAAAACTTTGAAGTTGAAA+TGG + chr1_3:61927277-61927296 Msa0131200:CDS 25.0%
!! GTAAGAGTGTAATAAAAACA+AGG - chr1_3:61927504-61927523 None:intergenic 25.0%
! TTCTGTCAAAACAATATTCT+TGG + chr1_3:61927971-61927990 Msa0131200:CDS 25.0%
! AACTTGATTATGAAGAATGA+GGG - chr1_3:61928161-61928180 None:intergenic 25.0%
! AACTTGATTATGAAGAATGA+GGG - chr1_3:61928161-61928180 None:intergenic 25.0%
! ATAAGGAAAGTCAAAATTTC+TGG + chr1_3:61928574-61928593 Msa0131200:intron 25.0%
! TAAGGAAAGTCAAAATTTCT+GGG + chr1_3:61928575-61928594 Msa0131200:intron 25.0%
!! ATGAATTTTTGTGACATACT+TGG + chr1_3:61928638-61928657 Msa0131200:intron 25.0%
! TCAATCATATCGTTATGATA+AGG + chr1_3:61928783-61928802 Msa0131200:CDS 25.0%
! TATGATAAGGATGAATATGA+AGG + chr1_3:61928796-61928815 Msa0131200:CDS 25.0%
! TTATCAACAAGAACAACAAA+AGG + chr1_3:61928925-61928944 Msa0131200:intron 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG + chr1_3:61929095-61929114 Msa0131200:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG - chr1_3:61929138-61929157 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG + chr1_3:61929137-61929156 Msa0131200:intron 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG + chr1_3:61929095-61929114 Msa0131200:intron 25.0%
! TTTAATCAATCATGTTCACA+AGG - chr1_3:61929138-61929157 None:intergenic 25.0%
! TTGTGAACATGATTGATTAA+AGG + chr1_3:61929137-61929156 Msa0131200:intron 25.0%
!! GGTCTTGTATATAACAAATA+TGG - chr1_3:61929465-61929484 None:intergenic 25.0%
! AAAGTTCAAGTATTTCACAA+TGG + chr1_3:61929666-61929685 Msa0131200:CDS 25.0%
! TGTCTAAACTATATTAGAGA+TGG + chr1_3:61929842-61929861 Msa0131200:CDS 25.0%
! AGAGAATTTAATACCTCAAT+CGG - chr1_3:61929908-61929927 None:intergenic 25.0%
!! ATTGAGGTATTAAATTCTCT+TGG + chr1_3:61929908-61929927 Msa0131200:CDS 25.0%
! TTTACCTACATTTAAGAGAA+AGG + chr1_3:61929933-61929952 Msa0131200:CDS 25.0%
! CATAGAAAAACCTGTTAAAA+TGG - chr1_3:61930186-61930205 None:intergenic 25.0%
! TATGACTTCAGTTTACATAT+TGG + chr1_3:61930202-61930221 Msa0131200:intron 25.0%
!!! GTTTTTCTTTTTCAGTGAAA+AGG + chr1_3:61930368-61930387 Msa0131200:intron 25.0%
! GCCAAAAAGGAAAAAATTAA+TGG - chr1_3:61930883-61930902 None:intergenic 25.0%
! AAAATGATTAGTAGGACAAA+AGG - chr1_3:61930933-61930952 None:intergenic 25.0%
!!! AGCAAAGATAAATTGTTTTG+GGG + chr1_3:61931074-61931093 Msa0131200:three_prime_UTR 25.0%
! TATTTATTTATGCATGTGCT+TGG + chr1_3:61931185-61931204 Msa0131200:three_prime_UTR 25.0%
! TATTCAATTCCTTGTGAAAT+TGG + chr1_3:61931300-61931319 Msa0131200:three_prime_UTR 25.0%
! ATTCAATTCCTTGTGAAATT+GGG + chr1_3:61931301-61931320 Msa0131200:three_prime_UTR 25.0%
! CACAAATAGATACGTTAATA+CGG - chr1_3:61931381-61931400 None:intergenic 25.0%
!! ACAAAAGTATATTCAAGACT+TGG + chr1_3:61931496-61931515 Msa0131200:three_prime_UTR 25.0%
! ATCTCTTCTATATTTAACAG+GGG - chr1_3:61931549-61931568 None:intergenic 25.0%
! CATCTCTTCTATATTTAACA+GGG - chr1_3:61931550-61931569 None:intergenic 25.0%
! TCATCTCTTCTATATTTAAC+AGG - chr1_3:61931551-61931570 None:intergenic 25.0%
! GTTAAATATAGAAGAGATGA+AGG + chr1_3:61931551-61931570 Msa0131200:three_prime_UTR 25.0%
! GTACAACAAAAGAAATATCT+GGG - chr1_3:61931646-61931665 None:intergenic 25.0%
! TGTACAACAAAAGAAATATC+TGG - chr1_3:61931647-61931666 None:intergenic 25.0%
AAAGAAGTTAACGAGAGATT+TGG - chr1_3:61921533-61921552 None:intergenic 30.0%
CAGGACCTATCTATTATTAA+CGG + chr1_3:61922129-61922148 Msa0131200:CDS 30.0%
TACCACCGTTAATAATAGAT+AGG - chr1_3:61922137-61922156 None:intergenic 30.0%
!! TTGAGTTGTAGTATGCATTT+TGG + chr1_3:61922225-61922244 Msa0131200:intron 30.0%
AGTAAGAATATCAAGATGGA+TGG + chr1_3:61922359-61922378 Msa0131200:intron 30.0%
GTAAGAATATCAAGATGGAT+GGG + chr1_3:61922360-61922379 Msa0131200:intron 30.0%
TAAGAATATCAAGATGGATG+GGG + chr1_3:61922361-61922380 Msa0131200:intron 30.0%
!! AGAAGTTGATGTTACTTGTA+AGG + chr1_3:61922462-61922481 Msa0131200:intron 30.0%
!! TTTATGTCCCTTTTAAAAGC+TGG + chr1_3:61922487-61922506 Msa0131200:intron 30.0%
!! AACCAAACCAGCTTTTAAAA+GGG - chr1_3:61922497-61922516 None:intergenic 30.0%
! AAACCAAACCAGCTTTTAAA+AGG - chr1_3:61922498-61922517 None:intergenic 30.0%
TGGTGATTCAAAATGATGAT+TGG + chr1_3:61922539-61922558 Msa0131200:CDS 30.0%
CTTACCATTGTGAAATACTT+TGG + chr1_3:61922883-61922902 Msa0131200:intron 30.0%
!!! GAGATACTTTTTTATTGGCA+TGG - chr1_3:61922963-61922982 None:intergenic 30.0%
!!! CTCTCGAGATACTTTTTTAT+TGG - chr1_3:61922968-61922987 None:intergenic 30.0%
TTGATCATAAGAGTTAACGA+AGG - chr1_3:61923003-61923022 None:intergenic 30.0%
! ATCCAGGTATATGAGATTTT+AGG + chr1_3:61923046-61923065 Msa0131200:intron 30.0%
! TCCAGGTATATGAGATTTTA+GGG + chr1_3:61923047-61923066 Msa0131200:intron 30.0%
GGGGAATATATTTAGATTTC+AGG + chr1_3:61923067-61923086 Msa0131200:intron 30.0%
! TAACAGATTCATTTAGAGTC+AGG + chr1_3:61923201-61923220 Msa0131200:intron 30.0%
TAGGAACAACTGTATTTAGA+GGG - chr1_3:61923400-61923419 None:intergenic 30.0%
TTAGGAACAACTGTATTTAG+AGG - chr1_3:61923401-61923420 None:intergenic 30.0%
! TGAGGTTGTTTCAAAACATA+TGG - chr1_3:61923502-61923521 None:intergenic 30.0%
! TATGAAGATGGAAAAAGTGT+TGG + chr1_3:61924045-61924064 Msa0131200:intron 30.0%
GTAAACACTGTTCACAAAAA+TGG - chr1_3:61924212-61924231 None:intergenic 30.0%
GAAGGTAGTAAACAATATAG+TGG + chr1_3:61924396-61924415 Msa0131200:intron 30.0%
ATAGGTTCATAATCATGATG+AGG - chr1_3:61924486-61924505 None:intergenic 30.0%
GAAAAAATACTAATCACAGC+AGG - chr1_3:61924566-61924585 None:intergenic 30.0%
TATGACATCTGACAATAGTT+AGG - chr1_3:61924588-61924607 None:intergenic 30.0%
ATTGTGCTCAATTTCTTATG+TGG - chr1_3:61925326-61925345 None:intergenic 30.0%
ATTCTTGTGACTCTTTAATG+GGG + chr1_3:61925421-61925440 Msa0131200:intron 30.0%
!!! TTCTTTTTCAACTATTAGCG+AGG + chr1_3:61925596-61925615 Msa0131200:intron 30.0%
! AGATGTTTGTTGAAATTCTG+AGG + chr1_3:61925778-61925797 Msa0131200:intron 30.0%
!!! GGCACCATATGTAATTTTTT+CGG - chr1_3:61925988-61926007 None:intergenic 30.0%
AATTGTTTGCCACAAATTTC+AGG + chr1_3:61926159-61926178 Msa0131200:intron 30.0%
AATAGGACACTTCCATTTAT+TGG + chr1_3:61926256-61926275 Msa0131200:CDS 30.0%
GAGAGATTACAGATGATTAT+TGG + chr1_3:61926617-61926636 Msa0131200:CDS 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + chr1_3:61926864-61926883 Msa0131200:intron 30.0%
!!! TATCTTGTCCTGTCTTTTTT+GGG + chr1_3:61927033-61927052 Msa0131200:intron 30.0%
TTGACCTTATAAACTAGAGT+GGG + chr1_3:61927075-61927094 Msa0131200:intron 30.0%
!! AATTGGCCTTCAACTTAATA+TGG + chr1_3:61927145-61927164 Msa0131200:intron 30.0%
!! GAACTACCATATTAAGTTGA+AGG - chr1_3:61927154-61927173 None:intergenic 30.0%
!! AAACTTTGAAGTTGAAATGG+AGG + chr1_3:61927280-61927299 Msa0131200:CDS 30.0%
AGTATATTCTGTCAGTTGTT+TGG + chr1_3:61927342-61927361 Msa0131200:CDS 30.0%
AGTGTAATAAAAACAAGGTC+CGG - chr1_3:61927499-61927518 None:intergenic 30.0%
! CATAGGATCTCTTCATATTT+TGG + chr1_3:61927574-61927593 Msa0131200:intron 30.0%
TGAGAAGAATATTGAGATGA+TGG - chr1_3:61927628-61927647 None:intergenic 30.0%
!!! TGCAACTGAAATACTTTTTC+AGG - chr1_3:61927818-61927837 None:intergenic 30.0%
! ATCCATTCGTTTTATAGTGA+TGG + chr1_3:61927903-61927922 Msa0131200:intron 30.0%
! TCCATTCGTTTTATAGTGAT+GGG + chr1_3:61927904-61927923 Msa0131200:intron 30.0%
GTCAAAACAATATTCTTGGA+AGG + chr1_3:61927975-61927994 Msa0131200:CDS 30.0%
AAAACAATATTCTTGGAAGG+AGG + chr1_3:61927978-61927997 Msa0131200:CDS 30.0%
ATTAGACTCTATTAGGTGTT+TGG + chr1_3:61928126-61928145 Msa0131200:intron 30.0%
CAACTTGATTATGAAGAATG+AGG - chr1_3:61928162-61928181 None:intergenic 30.0%
AGTTTACACTAGATAGTGTT+TGG + chr1_3:61928182-61928201 Msa0131200:intron 30.0%
CAACTTGATTATGAAGAATG+AGG - chr1_3:61928162-61928181 None:intergenic 30.0%
! ATTTTACTGATCGAAATCAG+AGG - chr1_3:61928452-61928471 None:intergenic 30.0%
TGCAGTTAAGAAACAAAGAA+AGG + chr1_3:61928512-61928531 Msa0131200:intron 30.0%
GCAGTTAAGAAACAAAGAAA+GGG + chr1_3:61928513-61928532 Msa0131200:intron 30.0%
CAGTTAAGAAACAAAGAAAG+GGG + chr1_3:61928514-61928533 Msa0131200:intron 30.0%
!!! TCAGCCTGTATGTATTTTTT+TGG + chr1_3:61928608-61928627 Msa0131200:intron 30.0%
TGCACCAAAAAAATACATAC+AGG - chr1_3:61928615-61928634 None:intergenic 30.0%
AGACAGTAACAAAAAGGAAA+AGG - chr1_3:61928724-61928743 None:intergenic 30.0%
TTAAGGCAACATATTTACGA+GGG - chr1_3:61928747-61928766 None:intergenic 30.0%
ATTAAGGCAACATATTTACG+AGG - chr1_3:61928748-61928767 None:intergenic 30.0%
TCAGATTATGCAAAACTTTC+TGG - chr1_3:61928988-61929007 None:intergenic 30.0%
! AAGTTTTGCATAATCTGACA+AGG + chr1_3:61928990-61929009 Msa0131200:intron 30.0%
! AGTTTTGCATAATCTGACAA+GGG + chr1_3:61928991-61929010 Msa0131200:intron 30.0%
TACATTCCAACTTACTTTGA+GGG - chr1_3:61929093-61929112 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG - chr1_3:61929094-61929113 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG + chr1_3:61929094-61929113 Msa0131200:intron 30.0%
! TGATTGATTAAAGGAGCATA+TGG + chr1_3:61929146-61929165 Msa0131200:intron 30.0%
GAAATCCAGATCATAATTTG+TGG + chr1_3:61929196-61929215 Msa0131200:intron 30.0%
TACATTCCAACTTACTTTGA+GGG - chr1_3:61929093-61929112 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG - chr1_3:61929094-61929113 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG + chr1_3:61929094-61929113 Msa0131200:intron 30.0%
! TGATTGATTAAAGGAGCATA+TGG + chr1_3:61929146-61929165 Msa0131200:intron 30.0%
GAAATCCAGATCATAATTTG+TGG + chr1_3:61929196-61929215 Msa0131200:intron 30.0%
! TATTTGTTAGTTCACTTGAG+AGG - chr1_3:61929486-61929505 None:intergenic 30.0%
! TAATTGATTTCCTATGTTGC+AGG + chr1_3:61929504-61929523 Msa0131200:intron 30.0%
TTCAAGTATTTCACAATGGT+TGG + chr1_3:61929670-61929689 Msa0131200:CDS 30.0%
TTATGTGAGGAAAAAGTTGA+AGG - chr1_3:61929767-61929786 None:intergenic 30.0%
!! TTCAACTTTTTCCTCACATA+AGG + chr1_3:61929766-61929785 Msa0131200:CDS 30.0%
GATTCCTTTCTCTTAAATGT+AGG - chr1_3:61929940-61929959 None:intergenic 30.0%
TCAAATTGAAATTACAGCTC+AGG + chr1_3:61930122-61930141 Msa0131200:CDS 30.0%
AACCTGTTAAAATGGTGATA+GGG - chr1_3:61930178-61930197 None:intergenic 30.0%
AAACCTGTTAAAATGGTGAT+AGG - chr1_3:61930179-61930198 None:intergenic 30.0%
TCATGACAAAAAACATAGCA+AGG - chr1_3:61930237-61930256 None:intergenic 30.0%
AAGAACAGTTGTTATACATG+AGG + chr1_3:61930722-61930741 Msa0131200:CDS 30.0%
AGAACAGTTGTTATACATGA+GGG + chr1_3:61930723-61930742 Msa0131200:CDS 30.0%
TTCAATTCCTTGTGAAATTG+GGG + chr1_3:61931302-61931321 Msa0131200:three_prime_UTR 30.0%
TTCATTGTACTGTTGAAAGA+TGG - chr1_3:61931706-61931725 None:intergenic 30.0%
AAAAAATAAACCACGCTTTG+GGG - chr1_3:61931750-61931769 None:intergenic 30.0%
GAAAAAATAAACCACGCTTT+GGG - chr1_3:61931751-61931770 None:intergenic 30.0%
AGTTTGATTGATGAACCAAT+GGG - chr1_3:61931773-61931792 None:intergenic 30.0%
AAGTTTGATTGATGAACCAA+TGG - chr1_3:61931774-61931793 None:intergenic 30.0%
ATGAAATATGAGCATTTCCT+AGG - chr1_3:61931870-61931889 None:intergenic 30.0%
TAGGAAATGCTCATATTTCA+TGG + chr1_3:61931869-61931888 Msa0131200:three_prime_UTR 30.0%
GGTAATGAAATGAAGGATCT+TGG - chr1_3:61921455-61921474 None:intergenic 35.0%
! GATTTGGCTTAGATATTCAG+AGG - chr1_3:61921517-61921536 None:intergenic 35.0%
!!! GCTATTTTGATGTGTGAAAG+AGG - chr1_3:61921644-61921663 None:intergenic 35.0%
CGTTAATAATAGATAGGTCC+TGG - chr1_3:61922131-61922150 None:intergenic 35.0%
GACCTATCTATTATTAACGG+TGG + chr1_3:61922132-61922151 Msa0131200:CDS 35.0%
TTTACCATCCACGTTCAAAT+TGG - chr1_3:61922192-61922211 None:intergenic 35.0%
ATTTATGGTCAATCATTGGG+TGG + chr1_3:61922256-61922275 Msa0131200:intron 35.0%
AAGAATATCAAGATGGATGG+GGG + chr1_3:61922362-61922381 Msa0131200:intron 35.0%
! TCATCATTTTGAATCACCAC+AGG - chr1_3:61922538-61922557 None:intergenic 35.0%
TTCAAAATGATGATTGGACG+TGG + chr1_3:61922545-61922564 Msa0131200:CDS 35.0%
TCAAAATGATGATTGGACGT+GGG + chr1_3:61922546-61922565 Msa0131200:CDS 35.0%
GATAACATCGTATTATCACC+TGG + chr1_3:61922607-61922626 Msa0131200:CDS 35.0%
GATTCTCACCTATATCTTCT+GGG - chr1_3:61922651-61922670 None:intergenic 35.0%
TGATTCTCACCTATATCTTC+TGG - chr1_3:61922652-61922671 None:intergenic 35.0%
GAAGATATAGGTGAGAATCA+TGG + chr1_3:61922652-61922671 Msa0131200:intron 35.0%
! TAGGTGAGAATCATGGATTT+TGG + chr1_3:61922659-61922678 Msa0131200:intron 35.0%
TGACTCGTAGGTCTTTAAAT+GGG - chr1_3:61922798-61922817 None:intergenic 35.0%
ATGACTCGTAGGTCTTTAAA+TGG - chr1_3:61922799-61922818 None:intergenic 35.0%
CAAATCATACAATGACTCGT+AGG - chr1_3:61922810-61922829 None:intergenic 35.0%
! AGCACCAAAGTATTTCACAA+TGG - chr1_3:61922890-61922909 None:intergenic 35.0%
TGGCTCAAGAAATAGGTTAA+AGG + chr1_3:61922933-61922952 Msa0131200:intron 35.0%
GGCTCAAGAAATAGGTTAAA+GGG + chr1_3:61922934-61922953 Msa0131200:intron 35.0%
! CCAGGTATATGAGATTTTAG+GGG + chr1_3:61923048-61923067 Msa0131200:intron 35.0%
TCGCATGAACAAAACATCTT+AGG + chr1_3:61923331-61923350 Msa0131200:intron 35.0%
AACTGTATTTAGAGGGAAGT+TGG - chr1_3:61923393-61923412 None:intergenic 35.0%
TCATCGGTATCACAATCAAA+GGG + chr1_3:61923469-61923488 Msa0131200:intron 35.0%
CTTACAATTCATGTGGTTTG+AGG - chr1_3:61923520-61923539 None:intergenic 35.0%
!! ACACCTGCATATGTTTTGAA+AGG + chr1_3:61923547-61923566 Msa0131200:intron 35.0%
TGTCCTTTCAAAACATATGC+AGG - chr1_3:61923553-61923572 None:intergenic 35.0%
TTCAAATATTGCGTGAATGC+AGG + chr1_3:61923712-61923731 Msa0131200:CDS 35.0%
TCAAATATTGCGTGAATGCA+GGG + chr1_3:61923713-61923732 Msa0131200:CDS 35.0%
ATAAAGAAGAGGGAAATACC+TGG - chr1_3:61923770-61923789 None:intergenic 35.0%
! TAGAAAGTGCAACACATTGA+AGG - chr1_3:61923847-61923866 None:intergenic 35.0%
!!! AAGTCAAAGGGCATTTTTCT+TGG - chr1_3:61924357-61924376 None:intergenic 35.0%
!! TCAAAGCATTGACATACATC+AGG - chr1_3:61924432-61924451 None:intergenic 35.0%
TCAATGCTTTGATAAGACGA+TGG + chr1_3:61924440-61924459 Msa0131200:intron 35.0%
TAAGACGATGGAGAAAATGT+TGG + chr1_3:61924452-61924471 Msa0131200:intron 35.0%
TATATTCATTCTCCTGAGTG+TGG - chr1_3:61924793-61924812 None:intergenic 35.0%
ATACCTTCTGGTAGAAATTC+TGG + chr1_3:61924936-61924955 Msa0131200:CDS 35.0%
AAACCAGAATTTCTACCAGA+AGG - chr1_3:61924942-61924961 None:intergenic 35.0%
!! TGGTAGAAATTCTGGTTTCA+AGG + chr1_3:61924944-61924963 Msa0131200:CDS 35.0%
!! TAGAAATTCTGGTTTCAAGG+TGG + chr1_3:61924947-61924966 Msa0131200:intron 35.0%
!! AGAAATTCTGGTTTCAAGGT+GGG + chr1_3:61924948-61924967 Msa0131200:intron 35.0%
ATACAAGGAATTCAGATGCT+AGG + chr1_3:61925088-61925107 Msa0131200:intron 35.0%
TACAACTTAGTCCACAATTG+CGG - chr1_3:61925160-61925179 None:intergenic 35.0%
!!! TGGGAAAATCGGATTTTTTG+AGG - chr1_3:61925263-61925282 None:intergenic 35.0%
ATTAGTTGCAGGAAGAATCT+GGG - chr1_3:61925282-61925301 None:intergenic 35.0%
AAGCTATCTTCATTAGTTGC+AGG - chr1_3:61925293-61925312 None:intergenic 35.0%
TGCAACTAATGAAGATAGCT+TGG + chr1_3:61925292-61925311 Msa0131200:intron 35.0%
! GTGTTCGTTTTACAAACAAG+TGG + chr1_3:61925364-61925383 Msa0131200:intron 35.0%
TTACAAACAAGTGGCACATT+TGG + chr1_3:61925373-61925392 Msa0131200:intron 35.0%
TTCTTGTGACTCTTTAATGG+GGG + chr1_3:61925422-61925441 Msa0131200:intron 35.0%
TTTCTTCACCAATATGCAGA+AGG + chr1_3:61925445-61925464 Msa0131200:intron 35.0%
ACTGTAATCCTTCTGCATAT+TGG - chr1_3:61925456-61925475 None:intergenic 35.0%
GAGAAATCCTCCTAAAACAA+AGG - chr1_3:61925528-61925547 None:intergenic 35.0%
TTAGGAGAGAAGAATAATGC+AGG - chr1_3:61925561-61925580 None:intergenic 35.0%
TTCAACTATTAGCGAGGATA+AGG + chr1_3:61925602-61925621 Msa0131200:intron 35.0%
! GAAGACGTTTTTGTTCTAGT+TGG + chr1_3:61925624-61925643 Msa0131200:intron 35.0%
!! ACGTTTTTGTTCTAGTTGGT+GGG + chr1_3:61925628-61925647 Msa0131200:intron 35.0%
GAGTATACCAATACTTTCAG+TGG - chr1_3:61925755-61925774 None:intergenic 35.0%
! GAAAGTTTGATTCGTGTGTT+CGG + chr1_3:61925800-61925819 Msa0131200:intron 35.0%
! CTATTTGAAGTCCATGCTAT+TGG - chr1_3:61926241-61926260 None:intergenic 35.0%
CAATAGCATGGACTTCAAAT+AGG + chr1_3:61926239-61926258 Msa0131200:CDS 35.0%
AAAACCTCGGATCCAATAAA+TGG - chr1_3:61926271-61926290 None:intergenic 35.0%
! ATTTATTGGATCCGAGGTTT+TGG + chr1_3:61926270-61926289 Msa0131200:CDS 35.0%
ATTGTACTTGTCCAAAACCT+CGG - chr1_3:61926284-61926303 None:intergenic 35.0%
CTTCAGGCAAAAATGAATCA+AGG - chr1_3:61926339-61926358 None:intergenic 35.0%
! TAGTTTGTCCATAGTCAACA+AGG - chr1_3:61926381-61926400 None:intergenic 35.0%
TATGGACAAACTAGAAATGC+AGG + chr1_3:61926388-61926407 Msa0131200:CDS 35.0%
ATGGACAAACTAGAAATGCA+GGG + chr1_3:61926389-61926408 Msa0131200:CDS 35.0%
! TCTTGAATATTTGACTTCCG+TGG - chr1_3:61926591-61926610 None:intergenic 35.0%
! ATGATTATTGGCTGAGATGT+AGG + chr1_3:61926629-61926648 Msa0131200:CDS 35.0%
! TGATTATTGGCTGAGATGTA+GGG + chr1_3:61926630-61926649 Msa0131200:CDS 35.0%
! GAAAAATCTTTTACTCCCTC+CGG + chr1_3:61926738-61926757 Msa0131200:intron 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - chr1_3:61926760-61926779 None:intergenic 35.0%
CTTTCTCTTGTAAATAGGAC+CGG + chr1_3:61926869-61926888 Msa0131200:intron 35.0%
!!! GTATCTTGTCCTGTCTTTTT+TGG + chr1_3:61927032-61927051 Msa0131200:intron 35.0%
CTTGACCTTATAAACTAGAG+TGG + chr1_3:61927074-61927093 Msa0131200:intron 35.0%
! AGATCCCACTCTAGTTTATA+AGG - chr1_3:61927082-61927101 None:intergenic 35.0%
CTAAAGAAAGTTTACTGCTC+AGG - chr1_3:61927188-61927207 None:intergenic 35.0%
ATGGAGGAAATATGATCACT+TGG + chr1_3:61927296-61927315 Msa0131200:CDS 35.0%
TCATATAGATACCATCTCTG+TGG - chr1_3:61927406-61927425 None:intergenic 35.0%
GTGTAATAAAAACAAGGTCC+GGG - chr1_3:61927498-61927517 None:intergenic 35.0%
CCTATGTTGATCTATGTTTC+TGG - chr1_3:61927560-61927579 None:intergenic 35.0%
CCAGAAACATAGATCAACAT+AGG + chr1_3:61927557-61927576 Msa0131200:intron 35.0%
AATATTCTTCTCATCCCGAT+AGG + chr1_3:61927635-61927654 Msa0131200:intron 35.0%
ATATTCTTCTCATCCCGATA+GGG + chr1_3:61927636-61927655 Msa0131200:intron 35.0%
CTATTATCAATACCAAAGCG+TGG - chr1_3:61927855-61927874 None:intergenic 35.0%
TCCCATCACTATAAAACGAA+TGG - chr1_3:61927908-61927927 None:intergenic 35.0%
! TATAGTGATGGGAGTTCAAA+AGG + chr1_3:61927915-61927934 Msa0131200:intron 35.0%
CAGAATCTTCCAGTGATAAA+TGG - chr1_3:61927947-61927966 None:intergenic 35.0%
TTATCACTGGAAGATTCTGA+AGG + chr1_3:61927948-61927967 Msa0131200:CDS 35.0%
GGTATATACTGAAGCTATGT+TGG + chr1_3:61928022-61928041 Msa0131200:intron 35.0%
TCTAACAATATGCATGTCCT+GGG - chr1_3:61928091-61928110 None:intergenic 35.0%
! ACGTGCTATTAGACTCTATT+AGG + chr1_3:61928119-61928138 Msa0131200:intron 35.0%
TATGAAGAATGAGGGTAACA+AGG - chr1_3:61928153-61928172 None:intergenic 35.0%
TATGAAGAATGAGGGTAACA+AGG - chr1_3:61928153-61928172 None:intergenic 35.0%
TATAATGCTCTTGCATGAAG+TGG + chr1_3:61928286-61928305 Msa0131200:intron 35.0%
GCAATTCTGTTGGAGAAAAA+GGG - chr1_3:61928350-61928369 None:intergenic 35.0%
AGCAATTCTGTTGGAGAAAA+AGG - chr1_3:61928351-61928370 None:intergenic 35.0%
GGTACAAAAAGCAATTCTGT+TGG - chr1_3:61928360-61928379 None:intergenic 35.0%
!!! TTGCTTTTTGTACCCTAAAC+AGG + chr1_3:61928366-61928385 Msa0131200:intron 35.0%
TGTACCCTAAACAGGAAATA+TGG + chr1_3:61928374-61928393 Msa0131200:intron 35.0%
GCTACCATATTTCCTGTTTA+GGG - chr1_3:61928381-61928400 None:intergenic 35.0%
AGCTACCATATTTCCTGTTT+AGG - chr1_3:61928382-61928401 None:intergenic 35.0%
TTAAGAAACAAAGAAAGGGG+TGG + chr1_3:61928517-61928536 Msa0131200:intron 35.0%
TAAGAAACAAAGAAAGGGGT+GGG + chr1_3:61928518-61928537 Msa0131200:intron 35.0%
ACGATAGATGATAGGTAAAC+AGG + chr1_3:61928543-61928562 Msa0131200:intron 35.0%
GTAAACAGGACAAAGACATA+AGG + chr1_3:61928557-61928576 Msa0131200:intron 35.0%
TGTTGCCTTAATAATGTCAC+AGG + chr1_3:61928756-61928775 Msa0131200:intron 35.0%
AAGCTCCTGTGACATTATTA+AGG - chr1_3:61928764-61928783 None:intergenic 35.0%
!! GGTCTACCATTTGATTTTCA+CGG + chr1_3:61928817-61928836 Msa0131200:CDS 35.0%
!! AGGACAATGAATTTGCTGAT+TGG - chr1_3:61929070-61929089 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG - chr1_3:61929204-61929223 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG - chr1_3:61929204-61929223 None:intergenic 35.0%
TATGACCTCAAAGTTGAATG+TGG + chr1_3:61929527-61929546 Msa0131200:CDS 35.0%
!!! CTGGAGTTTTAGATTTGTGA+TGG - chr1_3:61929565-61929584 None:intergenic 35.0%
GCAAAGAAAAAACATGCATC+TGG - chr1_3:61929584-61929603 None:intergenic 35.0%
GACACTTCTTAACATCTCTA+AGG - chr1_3:61929826-61929845 None:intergenic 35.0%
CAAATACACAGATCTTCCTT+TGG - chr1_3:61929992-61930011 None:intergenic 35.0%
!! TTCCCTATCACCATTTTAAC+AGG + chr1_3:61930173-61930192 Msa0131200:intron 35.0%
AGACTCGTTGAAATCCTATT+TGG + chr1_3:61930306-61930325 Msa0131200:intron 35.0%
!!! CTTTTTCAGTGAAAAGGATC+AGG + chr1_3:61930374-61930393 Msa0131200:intron 35.0%
TTAGAAGGTCAACAATCATC+AGG - chr1_3:61930407-61930426 None:intergenic 35.0%
ATATGCAACTGTTCACACAA+TGG + chr1_3:61930494-61930513 Msa0131200:CDS 35.0%
AGTTCCATTGATCTCAACTT+TGG - chr1_3:61930609-61930628 None:intergenic 35.0%
TAATCTATCACAGTGTTTGC+TGG - chr1_3:61930837-61930856 None:intergenic 35.0%
!!! ATTTTTTCCTTTTTGGCCCA+TGG + chr1_3:61930886-61930905 Msa0131200:three_prime_UTR 35.0%
AATCATTGTTGTCTGACCAT+GGG - chr1_3:61930905-61930924 None:intergenic 35.0%
AAATCATTGTTGTCTGACCA+TGG - chr1_3:61930906-61930925 None:intergenic 35.0%
CTTTGCATTCCTTCTGTAAA+GGG - chr1_3:61931033-61931052 None:intergenic 35.0%
ATGCAAAGGATCCAAAAGAA+TGG + chr1_3:61931045-61931064 Msa0131200:three_prime_UTR 35.0%
! TTGCTATACCACCATTCTTT+TGG - chr1_3:61931059-61931078 None:intergenic 35.0%
!!! AGATAAATTGTTTTGGGGTG+AGG + chr1_3:61931079-61931098 Msa0131200:three_prime_UTR 35.0%
TTGATTGTCTTCTTTCCACA+TGG + chr1_3:61931336-61931355 Msa0131200:three_prime_UTR 35.0%
AACCCAAGAAATAAGTGAGA+TGG - chr1_3:61931436-61931455 None:intergenic 35.0%
! CACTTATTTCTTGGGTTTAG+AGG + chr1_3:61931439-61931458 Msa0131200:three_prime_UTR 35.0%
!! TCTTTTGTTGTACACACAGT+TGG + chr1_3:61931653-61931672 Msa0131200:three_prime_UTR 35.0%
TGAATCATTAGATACCTCCT+TGG + chr1_3:61931722-61931741 Msa0131200:three_prime_UTR 35.0%
GGAAAAAATAAACCACGCTT+TGG - chr1_3:61931752-61931771 None:intergenic 35.0%
!!! CGTGGTTTATTTTTTCCCAT+TGG + chr1_3:61931755-61931774 Msa0131200:three_prime_UTR 35.0%
! GTAGTAGATTTTCTTGTGTC+TGG - chr1_3:61931832-61931851 None:intergenic 35.0%
GACACAAGAAAATCTACTAC+TGG + chr1_3:61931832-61931851 Msa0131200:three_prime_UTR 35.0%
CAAGAAAATCTACTACTGGA+TGG + chr1_3:61931836-61931855 Msa0131200:three_prime_UTR 35.0%
GAAATGAAGGATCTTGGTTG+TGG - chr1_3:61921449-61921468 None:intergenic 40.0%
AATAGCATGAATGCGCGAAA+GGG - chr1_3:61921490-61921509 None:intergenic 40.0%
TGGCTTAGATATTCAGAGGA+AGG - chr1_3:61921513-61921532 None:intergenic 40.0%
AGATGCGAACAAAGATCCAT+TGG - chr1_3:61921595-61921614 None:intergenic 40.0%
AGTTGCAGATTCAAGATGTG+AGG - chr1_3:61921621-61921640 None:intergenic 40.0%
GACATATGAAACGCAAAGAC+AGG - chr1_3:61921858-61921877 None:intergenic 40.0%
CTAAATGGTCATGCGTCAAT+TGG - chr1_3:61922002-61922021 None:intergenic 40.0%
TTCTGTCTCCAATTTGAACG+TGG + chr1_3:61922181-61922200 Msa0131200:intron 40.0%
!! GTCCCTTTTAAAAGCTGGTT+TGG + chr1_3:61922492-61922511 Msa0131200:intron 40.0%
! CATTTTGAATCACCACAGGA+GGG - chr1_3:61922534-61922553 None:intergenic 40.0%
! TCATTTTGAATCACCACAGG+AGG - chr1_3:61922535-61922554 None:intergenic 40.0%
TCTGTAAATGTCCGTTTGAG+TGG + chr1_3:61922751-61922770 Msa0131200:intron 40.0%
GGACTATAGATCCACTCAAA+CGG - chr1_3:61922765-61922784 None:intergenic 40.0%
CATTGTTGATCTACCACATG+TGG + chr1_3:61922837-61922856 Msa0131200:intron 40.0%
AAATTCACAATGGCCACATG+TGG - chr1_3:61922853-61922872 None:intergenic 40.0%
CTTCACATCTGTAGTTATCC+AGG + chr1_3:61923030-61923049 Msa0131200:intron 40.0%
CCCCTAAAATCTCATATACC+TGG - chr1_3:61923051-61923070 None:intergenic 40.0%
AACAAAGGCTTTGCACTAGA+TGG + chr1_3:61923126-61923145 Msa0131200:intron 40.0%
ACAAAGGCTTTGCACTAGAT+GGG + chr1_3:61923127-61923146 Msa0131200:intron 40.0%
! TGCGAGAAGAAGATTAGTCA+AGG - chr1_3:61923316-61923335 None:intergenic 40.0%
CTCATCGGTATCACAATCAA+AGG + chr1_3:61923468-61923487 Msa0131200:intron 40.0%
CATCGGTATCACAATCAAAG+GGG + chr1_3:61923470-61923489 Msa0131200:intron 40.0%
ATCGGTATCACAATCAAAGG+GGG + chr1_3:61923471-61923490 Msa0131200:intron 40.0%
ATGCAGGGATATTCCTATTC+TGG + chr1_3:61923728-61923747 Msa0131200:CDS 40.0%
TGCAGGGATATTCCTATTCT+GGG + chr1_3:61923729-61923748 Msa0131200:CDS 40.0%
GCACTGCATGTCTTGAATTT+CGG + chr1_3:61923940-61923959 Msa0131200:intron 40.0%
ATTGTGTAATTGCCACACTC+AGG + chr1_3:61924778-61924797 Msa0131200:intron 40.0%
!!! AATGGGTGCCAACTTTTTCA+GGG + chr1_3:61924912-61924931 Msa0131200:CDS 40.0%
AAGGTATGCCCTGAAAAAGT+TGG - chr1_3:61924923-61924942 None:intergenic 40.0%
CAGGAAGAATCTGGGAAAAT+CGG - chr1_3:61925274-61925293 None:intergenic 40.0%
CATTAGTTGCAGGAAGAATC+TGG - chr1_3:61925283-61925302 None:intergenic 40.0%
!!! TTCCCTGTCTCCTTTGTTTT+AGG + chr1_3:61925515-61925534 Msa0131200:intron 40.0%
CTCCTAAAACAAAGGAGACA+GGG - chr1_3:61925520-61925539 None:intergenic 40.0%
!! GACGTTTTTGTTCTAGTTGG+TGG + chr1_3:61925627-61925646 Msa0131200:intron 40.0%
TTTCCAAGGGAAAGAGATGT+CGG + chr1_3:61925676-61925695 Msa0131200:intron 40.0%
! TGAAGTGCCACTGAAAGTAT+TGG + chr1_3:61925745-61925764 Msa0131200:intron 40.0%
TTACATGAATGATGGCACTG+CGG - chr1_3:61926016-61926035 None:intergenic 40.0%
TGTTTGCCACAAATTTCAGG+TGG + chr1_3:61926162-61926181 Msa0131200:intron 40.0%
ATCGAACCACCTGAAATTTG+TGG - chr1_3:61926171-61926190 None:intergenic 40.0%
AAGTGCTCATTCCAATAGCA+TGG + chr1_3:61926227-61926246 Msa0131200:CDS 40.0%
ACTTCCATTTATTGGATCCG+AGG + chr1_3:61926264-61926283 Msa0131200:CDS 40.0%
!!! GAGGTTTTGGACAAGTACAA+TGG + chr1_3:61926283-61926302 Msa0131200:CDS 40.0%
!! GATTCATTTTTGCCTGAAGC+AGG + chr1_3:61926340-61926359 Msa0131200:CDS 40.0%
! TTTTTGCCTGAAGCAGGAAA+CGG + chr1_3:61926346-61926365 Msa0131200:CDS 40.0%
!! AGTTCAAGCCTTGTTGACTA+TGG + chr1_3:61926370-61926389 Msa0131200:CDS 40.0%
TGGACAAACTAGAAATGCAG+GGG + chr1_3:61926390-61926409 Msa0131200:CDS 40.0%
TAGAAATGCAGGGGTTCTTA+TGG + chr1_3:61926399-61926418 Msa0131200:CDS 40.0%
AGAAATGCAGGGGTTCTTAT+GGG + chr1_3:61926400-61926419 Msa0131200:CDS 40.0%
! ATGTAGGGCATCATACAACA+AGG + chr1_3:61926645-61926664 Msa0131200:CDS 40.0%
! TGTAGGGCATCATACAACAA+GGG + chr1_3:61926646-61926665 Msa0131200:CDS 40.0%
GGAAAACGTGCTAATTCTGA+TGG + chr1_3:61926667-61926686 Msa0131200:CDS 40.0%
GTGAATTGTAATACTCCCTC+CGG - chr1_3:61926891-61926910 None:intergenic 40.0%
GAACTAGACCCAAAAAAGAC+AGG - chr1_3:61927044-61927063 None:intergenic 40.0%
AGGAAATATGATCACTTGGC+TGG + chr1_3:61927300-61927319 Msa0131200:CDS 40.0%
GGAAATATGATCACTTGGCT+GGG + chr1_3:61927301-61927320 Msa0131200:CDS 40.0%
ATTCTGTCAGTTGTTTGGAC+AGG + chr1_3:61927347-61927366 Msa0131200:CDS 40.0%
! AGGAAGCTGAAAACACCTTT+TGG + chr1_3:61927367-61927386 Msa0131200:CDS 40.0%
! AGCTGAAAACACCTTTTGGT+TGG + chr1_3:61927371-61927390 Msa0131200:CDS 40.0%
GGAAGAACTATCCAACCAAA+AGG - chr1_3:61927385-61927404 None:intergenic 40.0%
ATAAAAACAAGGTCCGGGAA+TGG - chr1_3:61927493-61927512 None:intergenic 40.0%
! TTTTCGTTCATGGGAGGAAA+AGG + chr1_3:61927669-61927688 Msa0131200:CDS 40.0%
TTTGGAAGCAGTTAACGTTC+AGG + chr1_3:61927700-61927719 Msa0131200:CDS 40.0%
AAAGCGTGGAAAGATTAGAC+TGG - chr1_3:61927841-61927860 None:intergenic 40.0%
AGTCTAATCTTTCCACGCTT+TGG + chr1_3:61927840-61927859 Msa0131200:intron 40.0%
TAACAATATGCATGTCCTGG+GGG - chr1_3:61928089-61928108 None:intergenic 40.0%
CTAACAATATGCATGTCCTG+GGG - chr1_3:61928090-61928109 None:intergenic 40.0%
CTCTAACAATATGCATGTCC+TGG - chr1_3:61928092-61928111 None:intergenic 40.0%
CTCGAATCATGTACTAGCAT+AGG - chr1_3:61928264-61928283 None:intergenic 40.0%
ATTCTGTTGGAGAAAAAGGG+CGG - chr1_3:61928347-61928366 None:intergenic 40.0%
GATCGAAATCAGAGGAGAAT+GGG - chr1_3:61928444-61928463 None:intergenic 40.0%
TGATCGAAATCAGAGGAGAA+TGG - chr1_3:61928445-61928464 None:intergenic 40.0%
!! CTACCATTTGATTTTCACGG+CGG + chr1_3:61928820-61928839 Msa0131200:CDS 40.0%
TATCCGCCGTGAAAATCAAA+TGG - chr1_3:61928826-61928845 None:intergenic 40.0%
! ATATGTTGGTTACATCGGGT+AGG + chr1_3:61928843-61928862 Msa0131200:intron 40.0%
!! AACTTTCTGGCTGATGCTTT+AGG - chr1_3:61928975-61928994 None:intergenic 40.0%
!! TGCATCAAGCTTTGAAGACA+TGG - chr1_3:61929025-61929044 None:intergenic 40.0%
! ATTCCAACTTACTTTGAGGG+AGG - chr1_3:61929090-61929109 None:intergenic 40.0%
AAGTTGGAATGTAAAGGGAC+AGG + chr1_3:61929100-61929119 Msa0131200:intron 40.0%
! TTCCAACTTACTTTGAGGGA+GGG - chr1_3:61929089-61929108 None:intergenic 40.0%
! ATTCCAACTTACTTTGAGGG+AGG - chr1_3:61929090-61929109 None:intergenic 40.0%
AAGTTGGAATGTAAAGGGAC+AGG + chr1_3:61929100-61929119 Msa0131200:intron 40.0%
TGACACCACATTCAACTTTG+AGG - chr1_3:61929535-61929554 None:intergenic 40.0%
ACAATGGTTGGATGATACTG+AGG + chr1_3:61929682-61929701 Msa0131200:CDS 40.0%
!! ACTTTTTCCTCACATAAGGC+TGG + chr1_3:61929770-61929789 Msa0131200:CDS 40.0%
! CTCAATCGGTTTCCTTATCT+GGG - chr1_3:61929894-61929913 None:intergenic 40.0%
CTAGAAGCTAAGCCCATTAA+GGG + chr1_3:61930058-61930077 Msa0131200:CDS 40.0%
CGAGCTATAGTACCCTTAAT+GGG - chr1_3:61930073-61930092 None:intergenic 40.0%
ACGAGCTATAGTACCCTTAA+TGG - chr1_3:61930074-61930093 None:intergenic 40.0%
!! ATTAAGGGTACTATAGCTCG+TGG + chr1_3:61930073-61930092 Msa0131200:CDS 40.0%
TTTCAGTGAAAAGGATCAGG+CGG + chr1_3:61930377-61930396 Msa0131200:intron 40.0%
! GACCTTCTAAGAAATGACCT+TGG + chr1_3:61930417-61930436 Msa0131200:CDS 40.0%
GACCAAGGTCATTTCTTAGA+AGG - chr1_3:61930422-61930441 None:intergenic 40.0%
GATTGTACTTCCATGAGATG+CGG - chr1_3:61930474-61930493 None:intergenic 40.0%
ACAATGGTGAGTACAATTCG+TGG + chr1_3:61930510-61930529 Msa0131200:CDS 40.0%
CAATGGTGAGTACAATTCGT+GGG + chr1_3:61930511-61930530 Msa0131200:CDS 40.0%
GTACAATTCGTGGGAAAAAG+AGG + chr1_3:61930520-61930539 Msa0131200:CDS 40.0%
TCTCTTGAAAGTTGTTCTCG+AGG + chr1_3:61930636-61930655 Msa0131200:CDS 40.0%
TCTCTTCGTATTCGTCTTCT+GGG - chr1_3:61930794-61930813 None:intergenic 40.0%
ATCTCTTCGTATTCGTCTTC+TGG - chr1_3:61930795-61930814 None:intergenic 40.0%
GCTTCAGTCATAACATATCC+AGG - chr1_3:61930994-61931013 None:intergenic 40.0%
CCTTTGCATTCCTTCTGTAA+AGG - chr1_3:61931034-61931053 None:intergenic 40.0%
CCTTTACAGAAGGAATGCAA+AGG + chr1_3:61931031-61931050 Msa0131200:three_prime_UTR 40.0%
CAAAGGATCCAAAAGAATGG+TGG + chr1_3:61931048-61931067 Msa0131200:three_prime_UTR 40.0%
GTGTGCTTACAAGCTTGATT+TGG + chr1_3:61931145-61931164 Msa0131200:three_prime_UTR 40.0%
! CATGTGCTTGGCAGTAATTT+TGG + chr1_3:61931197-61931216 Msa0131200:three_prime_UTR 40.0%
CAAATGTCCCCAATTTCACA+AGG - chr1_3:61931312-61931331 None:intergenic 40.0%
AACACATTGCAGAAACCATG+TGG - chr1_3:61931354-61931373 None:intergenic 40.0%
CTGTGTCACGAGAAATATCT+TGG + chr1_3:61931410-61931429 Msa0131200:three_prime_UTR 40.0%
! TGGCCATCTCACTTATTTCT+TGG + chr1_3:61931430-61931449 Msa0131200:three_prime_UTR 40.0%
! GGCCATCTCACTTATTTCTT+GGG + chr1_3:61931431-61931450 Msa0131200:three_prime_UTR 40.0%
CATTTGTGAGTCCAACAAAC+TGG - chr1_3:61931523-61931542 None:intergenic 40.0%
ATTGAGTGAGATCATCGAGA+AGG - chr1_3:61931580-61931599 None:intergenic 40.0%
TCTCACTCAATATCGCAAAC+TGG + chr1_3:61931589-61931608 Msa0131200:three_prime_UTR 40.0%
ACTCAATATCGCAAACTGGT+GGG + chr1_3:61931593-61931612 Msa0131200:three_prime_UTR 40.0%
TTGTTGTACACACAGTTGGT+AGG + chr1_3:61931657-61931676 Msa0131200:three_prime_UTR 40.0%
GTTGAAAGATGGAAATGTCG+TGG - chr1_3:61931695-61931714 None:intergenic 40.0%
AAGTATATAGCGATGCCGAT+TGG + chr1_3:61931795-61931814 Msa0131200:three_prime_UTR 40.0%
! AGTATATAGCGATGCCGATT+GGG + chr1_3:61931796-61931815 Msa0131200:three_prime_UTR 40.0%
ATGAAGGATCTTGGTTGTGG+CGG - chr1_3:61921446-61921465 None:intergenic 45.0%
GCGAGAGGGTAATGAAATGA+AGG - chr1_3:61921462-61921481 None:intergenic 45.0%
GAATAGCATGAATGCGCGAA+AGG - chr1_3:61921491-61921510 None:intergenic 45.0%
GATCCATTGGCAAATCACGT+GGG - chr1_3:61921582-61921601 None:intergenic 45.0%
AGATCCATTGGCAAATCACG+TGG - chr1_3:61921583-61921602 None:intergenic 45.0%
GAAACAAGAAACCCTTGCCA+AGG - chr1_3:61921926-61921945 None:intergenic 45.0%
AGAATTGCCTCTACAGAAGC+AGG + chr1_3:61922050-61922069 Msa0131200:CDS 45.0%
GAATTGCCTCTACAGAAGCA+GGG + chr1_3:61922051-61922070 Msa0131200:CDS 45.0%
ACAAAACCCTGCTTCTGTAG+AGG - chr1_3:61922060-61922079 None:intergenic 45.0%
!! TACAGAAGCAGGGTTTTGTC+AGG + chr1_3:61922061-61922080 Msa0131200:CDS 45.0%
GTCTCCAATTTGAACGTGGA+TGG + chr1_3:61922185-61922204 Msa0131200:intron 45.0%
ATCGTATTATCACCTGGACC+TGG + chr1_3:61922613-61922632 Msa0131200:CDS 45.0%
CCTATATCTTCTGGGCATGT+CGG - chr1_3:61922643-61922662 None:intergenic 45.0%
CAAAGGCTTTGCACTAGATG+GGG + chr1_3:61923128-61923147 Msa0131200:intron 45.0%
! AGGTTTGCTCAACCAGAAAG+TGG - chr1_3:61923827-61923846 None:intergenic 45.0%
ATCTCTTCCCGTGGTTTGAT+AGG + chr1_3:61924668-61924687 Msa0131200:intron 45.0%
ACCCAATGCCTATCAAACCA+CGG - chr1_3:61924679-61924698 None:intergenic 45.0%
!! TAGGCATTGGGTTATGTGCA+TGG + chr1_3:61924687-61924706 Msa0131200:intron 45.0%
CATGCATCTGAACCAGTTCA+CGG + chr1_3:61924723-61924742 Msa0131200:CDS 45.0%
ATGCATCTGAACCAGTTCAC+GGG + chr1_3:61924724-61924743 Msa0131200:CDS 45.0%
TGCAGTGAAGTTGAGCACAA+TGG + chr1_3:61924894-61924913 Msa0131200:intron 45.0%
GCAGTGAAGTTGAGCACAAT+GGG + chr1_3:61924895-61924914 Msa0131200:intron 45.0%
!! CAATGGGTGCCAACTTTTTC+AGG + chr1_3:61924911-61924930 Msa0131200:CDS 45.0%
!!! CTTTTTCAGGGCATACCTTC+TGG + chr1_3:61924924-61924943 Msa0131200:CDS 45.0%
TTGATGTTGCTCCGCAATTG+TGG + chr1_3:61925146-61925165 Msa0131200:intron 45.0%
CCTCCTAAAACAAAGGAGAC+AGG - chr1_3:61925521-61925540 None:intergenic 45.0%
!!! CCTGTCTCCTTTGTTTTAGG+AGG + chr1_3:61925518-61925537 Msa0131200:intron 45.0%
TTCCAAGGGAAAGAGATGTC+GGG + chr1_3:61925677-61925696 Msa0131200:intron 45.0%
GCTATTGGAATGAGCACTTC+AGG - chr1_3:61926226-61926245 None:intergenic 45.0%
TGGGAGTCAAGCATTCTACA+AGG + chr1_3:61926419-61926438 Msa0131200:CDS 45.0%
CATTCTACAAGGCCACACTA+TGG + chr1_3:61926430-61926449 Msa0131200:CDS 45.0%
! GAATATTTGACTTCCGTGGC+AGG - chr1_3:61926587-61926606 None:intergenic 45.0%
CTCTTGTAAATAGGACCGGA+GGG - chr1_3:61926873-61926892 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG - chr1_3:61926872-61926891 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + chr1_3:61926872-61926891 Msa0131200:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG + chr1_3:61926873-61926892 Msa0131200:intron 45.0%
ACTTTCTTTAGCACATGCGC+AGG + chr1_3:61927197-61927216 Msa0131200:intron 45.0%
GGATAGTTCTTCCACAGAGA+TGG + chr1_3:61927392-61927411 Msa0131200:CDS 45.0%
! AAAAGCGTGCTCTTCCCTAT+CGG - chr1_3:61927653-61927672 None:intergenic 45.0%
!! AAGAGCACGCTTTTCGTTCA+TGG + chr1_3:61927659-61927678 Msa0131200:CDS 45.0%
! AGAGCACGCTTTTCGTTCAT+GGG + chr1_3:61927660-61927679 Msa0131200:CDS 45.0%
GAGGAAAAGGTGGATCACTT+TGG + chr1_3:61927682-61927701 Msa0131200:CDS 45.0%
! AGTGATGGGAGTTCAAAAGG+TGG + chr1_3:61927918-61927937 Msa0131200:intron 45.0%
GGTGGGAAACGATAGATGAT+AGG + chr1_3:61928535-61928554 Msa0131200:intron 45.0%
CGAGGGAGACAGTAACAAAA+AGG - chr1_3:61928730-61928749 None:intergenic 45.0%
! GATTTTCACGGCGGATATGT+TGG + chr1_3:61928829-61928848 Msa0131200:CDS 45.0%
! GGCGGATATGTTGGTTACAT+CGG + chr1_3:61928838-61928857 Msa0131200:CDS 45.0%
! GCGGATATGTTGGTTACATC+GGG + chr1_3:61928839-61928858 Msa0131200:CDS 45.0%
TGTCCTCCCTCAAAGTAAGT+TGG + chr1_3:61929084-61929103 Msa0131200:intron 45.0%
TGTTCACAAGGTCTCTTCCA+TGG - chr1_3:61929126-61929145 None:intergenic 45.0%
TTGAGGGAGGGCAATGAATT+TGG - chr1_3:61929271-61929290 None:intergenic 45.0%
TGTTCACAAGGTCTCTTCCA+TGG - chr1_3:61929126-61929145 None:intergenic 45.0%
TGAGGTCATACCTGCAACAT+AGG - chr1_3:61929517-61929536 None:intergenic 45.0%
GAGAAGCTTCTGAGCTTAAC+TGG + chr1_3:61929704-61929723 Msa0131200:CDS 45.0%
!! TGAGCTTAACTGGTTCTGTG+AGG + chr1_3:61929714-61929733 Msa0131200:CDS 45.0%
!! CTTAACTGGTTCTGTGAGGA+TGG + chr1_3:61929718-61929737 Msa0131200:CDS 45.0%
! TGGTTCTGTGAGGATGGATT+TGG + chr1_3:61929724-61929743 Msa0131200:CDS 45.0%
! CTGTGAGGATGGATTTGGAA+AGG + chr1_3:61929729-61929748 Msa0131200:CDS 45.0%
GTTTCCTTATCTGGGTTGTG+AGG - chr1_3:61929886-61929905 None:intergenic 45.0%
! CCTCAATCGGTTTCCTTATC+TGG - chr1_3:61929895-61929914 None:intergenic 45.0%
CCAGATAAGGAAACCGATTG+AGG + chr1_3:61929892-61929911 Msa0131200:CDS 45.0%
AAGGAATCCAGCACCTTATG+CGG + chr1_3:61929952-61929971 Msa0131200:CDS 45.0%
AAATTCAGCCAAGCCGCATA+AGG - chr1_3:61929968-61929987 None:intergenic 45.0%
! GGCTTGGCTGAATTTTCCAA+AGG + chr1_3:61929973-61929992 Msa0131200:CDS 45.0%
TATCACTCCTATCCAACTGC+AGG - chr1_3:61930036-61930055 None:intergenic 45.0%
GCTAGAAGCTAAGCCCATTA+AGG + chr1_3:61930057-61930076 Msa0131200:CDS 45.0%
! CAGCTGCTTTGCATCCAAAT+AGG - chr1_3:61930323-61930342 None:intergenic 45.0%
TGTGTCAAAGCTGCATTTCC+TGG + chr1_3:61930564-61930583 Msa0131200:CDS 45.0%
CGCACCAAAGTTGAGATCAA+TGG + chr1_3:61930602-61930621 Msa0131200:CDS 45.0%
! ACAATGGGTTCTCATCTTCC+TGG + chr1_3:61930973-61930992 Msa0131200:three_prime_UTR 45.0%
CAACAGTTGCCCTTTACAGA+AGG + chr1_3:61931021-61931040 Msa0131200:three_prime_UTR 45.0%
!! GTGAGGTTCGCTTTTCTAAC+AGG + chr1_3:61931096-61931115 Msa0131200:three_prime_UTR 45.0%
!!! TGGCAGTAATTTTGGCTTGC+TGG + chr1_3:61931205-61931224 Msa0131200:three_prime_UTR 45.0%
!!! GGCAGTAATTTTGGCTTGCT+GGG + chr1_3:61931206-61931225 Msa0131200:three_prime_UTR 45.0%
! CAAGACTTGGTCCAGTTTGT+TGG + chr1_3:61931509-61931528 Msa0131200:three_prime_UTR 45.0%
CACTCAATATCGCAAACTGG+TGG + chr1_3:61931592-61931611 Msa0131200:three_prime_UTR 45.0%
ACTGGATGGTGTATGTTCCT+AGG + chr1_3:61931850-61931869 Msa0131200:three_prime_UTR 45.0%
!! AAAAACATAATATTAAAAAT+TGG - chr1_3:61924516-61924535 None:intergenic 5.0%
! TCTCCCACGTGATTTGCCAA+TGG + chr1_3:61921576-61921595 Msa0131200:five_prime_UTR 50.0%
! TCTTTTGTCCAGACCCTCCT+TGG + chr1_3:61921906-61921925 Msa0131200:CDS 50.0%
CAAGAAACCCTTGCCAAGGA+GGG - chr1_3:61921922-61921941 None:intergenic 50.0%
ACAAGAAACCCTTGCCAAGG+AGG - chr1_3:61921923-61921942 None:intergenic 50.0%
GATGTATGTAATCGCCGCGA+TGG + chr1_3:61921955-61921974 Msa0131200:CDS 50.0%
CCGACATGCCCAGAAGATAT+AGG + chr1_3:61922640-61922659 Msa0131200:CDS 50.0%
CCTATTCTGGGTGTTTGCCT+CGG + chr1_3:61923741-61923760 Msa0131200:CDS 50.0%
AGAGCGAGACTGTGTTAGCA+AGG - chr1_3:61923978-61923997 None:intergenic 50.0%
CACGGGAAGAGATTAAGCCA+AGG - chr1_3:61924661-61924680 None:intergenic 50.0%
CTTGGCTTAATCTCTTCCCG+TGG + chr1_3:61924659-61924678 Msa0131200:intron 50.0%
TCCCGTGGTTTGATAGGCAT+TGG + chr1_3:61924674-61924693 Msa0131200:intron 50.0%
CCCAATGCCTATCAAACCAC+GGG - chr1_3:61924678-61924697 None:intergenic 50.0%
CCCGTGGTTTGATAGGCATT+GGG + chr1_3:61924675-61924694 Msa0131200:intron 50.0%
! CGTGAACTGGTTCAGATGCA+TGG - chr1_3:61924725-61924744 None:intergenic 50.0%
!! GGTGGCTTGATAGTGAGGAA+GGG + chr1_3:61925698-61925717 Msa0131200:intron 50.0%
GGAAGGGATGCATCACATAG+TGG + chr1_3:61925714-61925733 Msa0131200:intron 50.0%
AATGATGGCACTGCGGAATC+TGG - chr1_3:61926009-61926028 None:intergenic 50.0%
GGTGGTTCGATATCATTCGC+TGG + chr1_3:61926180-61926199 Msa0131200:intron 50.0%
GAACTTCCGTTTCCTGCTTC+AGG - chr1_3:61926355-61926374 None:intergenic 50.0%
AACACCTGCACACCATAGTG+TGG - chr1_3:61926445-61926464 None:intergenic 50.0%
AAAGCGTGCTCTTCCCTATC+GGG - chr1_3:61927652-61927671 None:intergenic 50.0%
TCGTTCATGGGAGGAAAAGG+TGG + chr1_3:61927672-61927691 Msa0131200:CDS 50.0%
!! CGTTCAGGTTGTCTGATCAG+AGG + chr1_3:61927715-61927734 Msa0131200:CDS 50.0%
GATGGGAGTTCAAAAGGTGG+TGG + chr1_3:61927921-61927940 Msa0131200:CDS 50.0%
! AGGTGGTGGCCATTTATCAC+TGG + chr1_3:61927935-61927954 Msa0131200:CDS 50.0%
! TGTTGGTTACATCGGGTAGG+TGG + chr1_3:61928846-61928865 Msa0131200:intron 50.0%
ATAGCTGCACCAAACTCTGC+TGG + chr1_3:61929044-61929063 Msa0131200:intron 50.0%
GAATGTAAAGGGACAGGCCA+TGG + chr1_3:61929106-61929125 Msa0131200:intron 50.0%
TGGAACCTGTGCAATGCACT+GGG - chr1_3:61929251-61929270 None:intergenic 50.0%
TTGGAACCTGTGCAATGCAC+TGG - chr1_3:61929252-61929271 None:intergenic 50.0%
TGCCCTCCCTCAAAGTAAGT+TGG + chr1_3:61929278-61929297 Msa0131200:intron 50.0%
GAATGTAAAGGGACAGGCCA+TGG + chr1_3:61929106-61929125 Msa0131200:intron 50.0%
AACAGTCCCAGTGCATTGCA+CGG + chr1_3:61929242-61929261 Msa0131200:intron 50.0%
! TGCGAAACCAGCCTTATGTG+AGG - chr1_3:61929780-61929799 None:intergenic 50.0%
TGTGCCTCACAACCCAGATA+AGG + chr1_3:61929879-61929898 Msa0131200:CDS 50.0%
!! TTTGCTGTTCTTCCCCTGAG+AGG + chr1_3:61930008-61930027 Msa0131200:CDS 50.0%
AGAGGTTCCTGCAGTTGGAT+AGG + chr1_3:61930026-61930045 Msa0131200:CDS 50.0%
!! TATAGCTCGTGGTGCTACTG+AGG + chr1_3:61930084-61930103 Msa0131200:CDS 50.0%
CAGGATCACATACACGACCA+AGG - chr1_3:61930437-61930456 None:intergenic 50.0%
CTTGGTCGTGTATGTGATCC+TGG + chr1_3:61930435-61930454 Msa0131200:CDS 50.0%
GTCAAAGCTGCATTTCCTGG+TGG + chr1_3:61930567-61930586 Msa0131200:CDS 50.0%
TTTCCTGGTGGTTCGATGAC+AGG + chr1_3:61930579-61930598 Msa0131200:CDS 50.0%
! TGTTCTCGAGGCATCTACTC+AGG + chr1_3:61930648-61930667 Msa0131200:CDS 50.0%
CATGAGGGTGAAGCTTCCAT+AGG + chr1_3:61930738-61930757 Msa0131200:CDS 50.0%
AAGCTTCCATAGGAGCTGGA+GGG + chr1_3:61930748-61930767 Msa0131200:CDS 50.0%
TGTCTGACCATGGGCCAAAA+AGG - chr1_3:61930896-61930915 None:intergenic 50.0%
!!! GGCTTGCTGGGTTTTGTTTC+TGG + chr1_3:61931218-61931237 Msa0131200:three_prime_UTR 50.0%
TGGCGGTGTAGATTCGAAGC+GGG - chr1_3:61921429-61921448 None:intergenic 55.0%
GTGGCGGTGTAGATTCGAAG+CGG - chr1_3:61921430-61921449 None:intergenic 55.0%
!! GCGAAAGGGCATTAGCGAGA+GGG - chr1_3:61921476-61921495 None:intergenic 55.0%
CGCTCGTGTTTCTTCCATCG+CGG - chr1_3:61921972-61921991 None:intergenic 55.0%
! CATTTTGCCAGTCCCTCCTG+TGG + chr1_3:61922519-61922538 Msa0131200:intron 55.0%
TGAATCACCACAGGAGGGAC+TGG - chr1_3:61922529-61922548 None:intergenic 55.0%
ATACACCTGATAGCAGCGCG+TGG + chr1_3:61922913-61922932 Msa0131200:intron 55.0%
CAGCGCGTGGCTCAAGAAAT+AGG + chr1_3:61922926-61922945 Msa0131200:intron 55.0%
CCGAGGCAAACACCCAGAAT+AGG - chr1_3:61923744-61923763 None:intergenic 55.0%
AGGGAAATACCTGGTGTCCG+AGG - chr1_3:61923761-61923780 None:intergenic 55.0%
CACCCGACATCTCTTTCCCT+TGG - chr1_3:61925682-61925701 None:intergenic 55.0%
CAAGGGAAAGAGATGTCGGG+TGG + chr1_3:61925680-61925699 Msa0131200:intron 55.0%
!! TGTCGGGTGGCTTGATAGTG+AGG + chr1_3:61925693-61925712 Msa0131200:intron 55.0%
!! GGGTGGCTTGATAGTGAGGA+AGG + chr1_3:61925697-61925716 Msa0131200:intron 55.0%
AAGGCCACACTATGGTGTGC+AGG + chr1_3:61926438-61926457 Msa0131200:CDS 55.0%
TGGCAGGTTGCAACACTCTC+TGG - chr1_3:61926571-61926590 None:intergenic 55.0%
!! GAGAGTGTTGCAACCTGCCA+CGG + chr1_3:61926571-61926590 Msa0131200:CDS 55.0%
GATCACTTGGCTGGGCAAGT+TGG + chr1_3:61927309-61927328 Msa0131200:CDS 55.0%
TGTCACCACCAAGCCATTCC+CGG + chr1_3:61927477-61927496 Msa0131200:intron 55.0%
AACAAGGTCCGGGAATGGCT+TGG - chr1_3:61927488-61927507 None:intergenic 55.0%
! GCACGCTTTTCGTTCATGGG+AGG + chr1_3:61927663-61927682 Msa0131200:CDS 55.0%
ACACTTCTTACCTAGCCCCC+AGG + chr1_3:61928071-61928090 Msa0131200:intron 55.0%
ATATGCATGTCCTGGGGGCT+AGG - chr1_3:61928084-61928103 None:intergenic 55.0%
! GCTGATTGGCCAGCAGAGTT+TGG - chr1_3:61929056-61929075 None:intergenic 55.0%
ACAGTCCCAGTGCATTGCAC+AGG + chr1_3:61929243-61929262 Msa0131200:intron 55.0%
ACAGTCCCAGTGCATTGCAC+GGG + chr1_3:61929243-61929262 Msa0131200:intron 55.0%
TGGAACCCGTGCAATGCACT+GGG - chr1_3:61929445-61929464 None:intergenic 55.0%
ATGGAACCCGTGCAATGCAC+TGG - chr1_3:61929446-61929465 None:intergenic 55.0%
ATCCAGCACCTTATGCGGCT+TGG + chr1_3:61929957-61929976 Msa0131200:CDS 55.0%
CAACTGCAGGAACCTCTCAG+GGG - chr1_3:61930023-61930042 None:intergenic 55.0%
CCAACTGCAGGAACCTCTCA+GGG - chr1_3:61930024-61930043 None:intergenic 55.0%
TCCAACTGCAGGAACCTCTC+AGG - chr1_3:61930025-61930044 None:intergenic 55.0%
TGTTGACGTGCCGCATCTCA+TGG + chr1_3:61930461-61930480 Msa0131200:CDS 55.0%
GGCATCTACTCAGGCTGCAT+TGG + chr1_3:61930657-61930676 Msa0131200:CDS 55.0%
GGTGAAGCTTCCATAGGAGC+TGG + chr1_3:61930744-61930763 Msa0131200:CDS 55.0%
GAAGCTTCCATAGGAGCTGG+AGG + chr1_3:61930747-61930766 Msa0131200:CDS 55.0%
AGCTTCCATAGGAGCTGGAG+GGG + chr1_3:61930749-61930768 Msa0131200:CDS 55.0%
AATTGCCCCTCCAGCTCCTA+TGG - chr1_3:61930757-61930776 None:intergenic 55.0%
! TAGCGATGCCGATTGGGTTG+TGG + chr1_3:61931802-61931821 Msa0131200:three_prime_UTR 55.0%
CTGGACAGCCACAACCCAAT+CGG - chr1_3:61931813-61931832 None:intergenic 55.0%
CGGTGTAGATTCGAAGCGGG+TGG - chr1_3:61921426-61921445 None:intergenic 60.0%
!! CGCGAAAGGGCATTAGCGAG+AGG - chr1_3:61921477-61921496 None:intergenic 60.0%
TGTCCAGACCCTCCTTGGCA+AGG + chr1_3:61921911-61921930 Msa0131200:CDS 60.0%
GTCCAGACCCTCCTTGGCAA+GGG + chr1_3:61921912-61921931 Msa0131200:CDS 60.0%
AACCCTTGCCAAGGAGGGTC+TGG - chr1_3:61921917-61921936 None:intergenic 60.0%
CATGTCGGAGAACCAGGTCC+AGG - chr1_3:61922628-61922647 None:intergenic 60.0%
TCTGGGCATGTCGGAGAACC+AGG - chr1_3:61922634-61922653 None:intergenic 60.0%
TTGAGCCACGCGCTGCTATC+AGG - chr1_3:61922921-61922940 None:intergenic 60.0%
AACCAGTTCACGGGCGTCTG+AGG + chr1_3:61924733-61924752 Msa0131200:CDS 60.0%
TACCTCAGACGCCCGTGAAC+TGG - chr1_3:61924738-61924757 None:intergenic 60.0%
! CACTTGGCTGGGCAAGTTGG+TGG + chr1_3:61927312-61927331 Msa0131200:CDS 60.0%
! AAGGTCCGGGAATGGCTTGG+TGG - chr1_3:61927485-61927504 None:intergenic 60.0%
AGCCAAGCCGCATAAGGTGC+TGG - chr1_3:61929962-61929981 None:intergenic 60.0%
CCCTGAGAGGTTCCTGCAGT+TGG + chr1_3:61930021-61930040 Msa0131200:CDS 60.0%
!! AGCTCGTGGTGCTACTGAGG+AGG + chr1_3:61930087-61930106 Msa0131200:CDS 60.0%
TGCGGCACGTCAACAGATCC+AGG - chr1_3:61930456-61930475 None:intergenic 60.0%
!! AACCACGCTTTGGGGTGCCA+AGG - chr1_3:61931742-61931761 None:intergenic 60.0%
GGGTGTTTGCCTCGGACACC+AGG + chr1_3:61923749-61923768 Msa0131200:CDS 65.0%
GCGCCTGTCATCGAACCACC+AGG - chr1_3:61930585-61930604 None:intergenic 65.0%
!! CACGCTTTGGGGTGCCAAGG+AGG - chr1_3:61931739-61931758 None:intergenic 65.0%
CTCCTTGGCACCCCAAAGCG+TGG + chr1_3:61931737-61931756 Msa0131200:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 61921412 61931934 61921412 ID=Msa0131200;Name=Msa0131200
chr1_3 mRNA 61921412 61931934 61921412 ID=Msa0131200-mRNA-1;Parent=Msa0131200;Name=Msa0131200-mRNA-1;_AED=0.11;_eAED=0.11;_QI=281|1|1|1|0.84|0.85|14|1071|870
chr1_3 exon 61921412 61921665 61921412 ID=Msa0131200-mRNA-1:exon:20556;Parent=Msa0131200-mRNA-1
chr1_3 exon 61921823 61922153 61921823 ID=Msa0131200-mRNA-1:exon:20557;Parent=Msa0131200-mRNA-1
chr1_3 exon 61922530 61922661 61922530 ID=Msa0131200-mRNA-1:exon:20558;Parent=Msa0131200-mRNA-1
chr1_3 exon 61923703 61923770 61923703 ID=Msa0131200-mRNA-1:exon:20559;Parent=Msa0131200-mRNA-1
chr1_3 exon 61924690 61924754 61924690 ID=Msa0131200-mRNA-1:exon:20560;Parent=Msa0131200-mRNA-1
chr1_3 exon 61924899 61924965 61924899 ID=Msa0131200-mRNA-1:exon:20561;Parent=Msa0131200-mRNA-1
chr1_3 exon 61926181 61926459 61926181 ID=Msa0131200-mRNA-1:exon:20562;Parent=Msa0131200-mRNA-1
chr1_3 exon 61926562 61926688 61926562 ID=Msa0131200-mRNA-1:exon:20563;Parent=Msa0131200-mRNA-1
chr1_3 exon 61927208 61927413 61927208 ID=Msa0131200-mRNA-1:exon:20564;Parent=Msa0131200-mRNA-1
chr1_3 exon 61927657 61927736 61927657 ID=Msa0131200-mRNA-1:exon:20565;Parent=Msa0131200-mRNA-1
chr1_3 exon 61927920 61928022 61927920 ID=Msa0131200-mRNA-1:exon:20566;Parent=Msa0131200-mRNA-1
chr1_3 exon 61928778 61928860 61928778 ID=Msa0131200-mRNA-1:exon:20567;Parent=Msa0131200-mRNA-1
chr1_3 exon 61929526 61930143 61929526 ID=Msa0131200-mRNA-1:exon:20568;Parent=Msa0131200-mRNA-1
chr1_3 exon 61930383 61931934 61930383 ID=Msa0131200-mRNA-1:exon:20569;Parent=Msa0131200-mRNA-1
chr1_3 five_prime_UTR 61921412 61921665 61921412 ID=Msa0131200-mRNA-1:five_prime_utr;Parent=Msa0131200-mRNA-1
chr1_3 five_prime_UTR 61921823 61921849 61921823 ID=Msa0131200-mRNA-1:five_prime_utr;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61921850 61922153 61921850 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61922530 61922661 61922530 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61923703 61923770 61923703 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61924690 61924754 61924690 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61924899 61924965 61924899 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61926181 61926459 61926181 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61926562 61926688 61926562 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61927208 61927413 61927208 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61927657 61927736 61927657 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61927920 61928022 61927920 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61928778 61928860 61928778 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61929526 61930143 61929526 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 CDS 61930383 61930863 61930383 ID=Msa0131200-mRNA-1:cds;Parent=Msa0131200-mRNA-1
chr1_3 three_prime_UTR 61930864 61931934 61930864 ID=Msa0131200-mRNA-1:three_prime_utr;Parent=Msa0131200-mRNA-1
Gene Sequence

>Msa0131200

ATGAACCTGTCTTTGCGTTTCATATGTCCTACAAGTGAATACAAAAATGTGAATTCTCTTTTGTCCAGACCCTCCTTGGCAAGGGTTTCTTGTTTCATGAAGAGAGATGTATGTAATCGCCGCGATGGAAGAAACACGAGCGTGTATTGCCAATTGACGCATGACCATTTAGAAGAATCATATAAAAGAAAGAAAAAGCTAGAATTGCCTCTACAGAAGCAGGGTTTTGTCAGGACTTTGTTGATTGATAACTATGACAGTTATACATACAATATATACCAGGACCTATCTATTATTAACGGTGTCCCTCCTGTGGTGATTCAAAATGATGATTGGACGTGGGACGAACTTTGCTATTACTTGTACGAAGAAAATGCATTTGATAACATCGTATTATCACCTGGACCTGGTTCTCCGACATGCCCAGAAGATATAGGTATTTGTCTTCAAATATTGCGTGAATGCAGGGATATTCCTATTCTGGGTGTTTGCCTCGGACACCAGGCATTGGGTTATGTGCATGGAGCTCAAGTTGTCCATGCATCTGAACCAGTTCACGGGCGTCTGAGTGAAGTTGAGCACAATGGGTGCCAACTTTTTCAGGGCATACCTTCTGGTAGAAATTCTGGTTTCAAGGTGGTTCGATATCATTCGCTGGTGATAGATTCTGAATCGCTTCCTGAAGTGCTCATTCCAATAGCATGGACTTCAAATAGGACACTTCCATTTATTGGATCCGAGGTTTTGGACAAGTACAATGGTCATGAACTTCAGACTGATCAAAGCATTTTCCTTGATTCATTTTTGCCTGAAGCAGGAAACGGAAGTTCAAGCCTTGTTGACTATGGACAAACTAGAAATGCAGGGGTTCTTATGGGAGTCAAGCATTCTACAAGGCCACACTATGGTGTGCAGTTTCATCCAGAGAGTGTTGCAACCTGCCACGGAAGTCAAATATTCAAGAATTTTAGAGAGATTACAGATGATTATTGGCTGAGATGTAGGGCATCATACAACAAGGGAAAACGTGCTAATTCTGATGCACATGCGCAGGTTTCAAGTGCTAGTAGACTCTACAGACATTTAGTACATAATAATACTGAGGTGAACTACAAAACTTTGAAGTTGAAATGGAGGAAATATGATCACTTGGCTGGGCAAGTTGGTGGAGCAAAAAGTATATTCTGTCAGTTGTTTGGACAGGAAGCTGAAAACACCTTTTGGTTGGATAGTTCTTCCACAGAGATGGGAAGAGCACGCTTTTCGTTCATGGGAGGAAAAGGTGGATCACTTTGGAAGCAGTTAACGTTCAGGTTGTCTGATCAGAGTGATGGGAGTTCAAAAGGTGGTGGCCATTTATCACTGGAAGATTCTGAAGGTTCTGTCAAAACAATATTCTTGGAAGGAGGTTTTCTTGATTATTTGAACAAGGAGCTTCAATCATATCGTTATGATAAGGATGAATATGAAGGTCTACCATTTGATTTTCACGGCGGATATGTTGGTTACATCGGGTATGACCTCAAAGTTGAATGTGGTGTCACATGTAACCATCACAAATCTAAAACTCCAGATGCATGTTTTTTCTTTGCTGATAATCTTGTTGCTATTGATCACAAAAATGATGATGTTTATTTATTGGCTATACATGAAGAAAGTTCAAGTATTTCACAATGGTTGGATGATACTGAGGAGAAGCTTCTGAGCTTAACTGGTTCTGTGAGGATGGATTTGGAAAGGCAGTACTCTCATCCTTCAACTTTTTCCTCACATAAGGCTGGTTTCGCAGCTGAAAAATCTAAAGAGCAGTACCTTAGAGATGTTAAGAAGTGTCTAAACTATATTAGAGATGGAGAGAGCTATGAGTTGTGCCTCACAACCCAGATAAGGAAACCGATTGAGGTATTAAATTCTCTTGGACTTTACCTACATTTAAGAGAAAGGAATCCAGCACCTTATGCGGCTTGGCTGAATTTTCCAAAGGAAGATCTGTGTATTTGCTGTTCTTCCCCTGAGAGGTTCCTGCAGTTGGATAGGAGTGATATGCTAGAAGCTAAGCCCATTAAGGGTACTATAGCTCGTGGTGCTACTGAGGAGGAAGACAAACAACTCAAATTGAAATTACAGCTCAGTGAAAAGGATCAGGCGGAAAACCTGATGATTGTTGACCTTCTAAGAAATGACCTTGGTCGTGTATGTGATCCTGGATCTGTTGACGTGCCGCATCTCATGGAAGTACAATCATATGCAACTGTTCACACAATGGTGAGTACAATTCGTGGGAAAAAGAGGTCAGATATAAGTGCTGTAGACTGTGTCAAAGCTGCATTTCCTGGTGGTTCGATGACAGGCGCACCAAAGTTGAGATCAATGGAACTTCTTGATTCTCTTGAAAGTTGTTCTCGAGGCATCTACTCAGGCTGCATTGGATTTTTCTCATATAATCAAACATTTGATCTAAATATTGTCATAAGAACAGTTGTTATACATGAGGGTGAAGCTTCCATAGGAGCTGGAGGGGCAATTGTTGCTCTGTCAAACCCAGAAGACGAATACGAAGAGATGATCTTGAAAACAAAAGCACCAGCAAACACTGTGATAGATTATGAATAG
Protein sequence

>Msa0131200

MNLSLRFICPTSEYKNVNSLLSRPSLARVSCFMKRDVCNRRDGRNTSVYCQLTHDHLEESYKRKKKLELPLQKQGFVRTLLIDNYDSYTYNIYQDLSIINGVPPVVIQNDDWTWDELCYYLYEENAFDNIVLSPGPGSPTCPEDIGICLQILRECRDIPILGVCLGHQALGYVHGAQVVHASEPVHGRLSEVEHNGCQLFQGIPSGRNSGFKVVRYHSLVIDSESLPEVLIPIAWTSNRTLPFIGSEVLDKYNGHELQTDQSIFLDSFLPEAGNGSSSLVDYGQTRNAGVLMGVKHSTRPHYGVQFHPESVATCHGSQIFKNFREITDDYWLRCRASYNKGKRANSDAHAQVSSASRLYRHLVHNNTEVNYKTLKLKWRKYDHLAGQVGGAKSIFCQLFGQEAENTFWLDSSSTEMGRARFSFMGGKGGSLWKQLTFRLSDQSDGSSKGGGHLSLEDSEGSVKTIFLEGGFLDYLNKELQSYRYDKDEYEGLPFDFHGGYVGYIGYDLKVECGVTCNHHKSKTPDACFFFADNLVAIDHKNDDVYLLAIHEESSSISQWLDDTEEKLLSLTGSVRMDLERQYSHPSTFSSHKAGFAAEKSKEQYLRDVKKCLNYIRDGESYELCLTTQIRKPIEVLNSLGLYLHLRERNPAPYAAWLNFPKEDLCICCSSPERFLQLDRSDMLEAKPIKGTIARGATEEEDKQLKLKLQLSEKDQAENLMIVDLLRNDLGRVCDPGSVDVPHLMEVQSYATVHTMVSTIRGKKRSDISAVDCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIHEGEASIGAGGAIVALSNPEDEYEEMILKTKAPANTVIDYE*