Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0177480 | XP_003591991.3 | 96.095 | 1178 | 44 | 2 | 1 | 1177 | 1 | 1177 | 0.0 | 2201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0177480 | sp|B7SY83|PS1_ARATH | 34.252 | 508 | 234 | 18 | 699 | 1163 | 990 | 1440 | 3.87e-54 | 211 |
| Msa0177480 | sp|B7SY83|PS1_ARATH | 46.774 | 124 | 54 | 2 | 19 | 130 | 20 | 143 | 6.60e-27 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0177480 | A0A396JVH4 | 96.095 | 1178 | 44 | 2 | 1 | 1177 | 1 | 1177 | 0.0 | 2201 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046370 | Msa0177480 | 0.819361 | 1.209079e-52 | -8.615850e-47 |
| Msa0177480 | Msa0789820 | 0.841221 | 5.419756e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0177480 | MtrunA17_Chr1g0200411 | 96.095 | 1178 | 44 | 2 | 1 | 1177 | 1 | 1177 | 0.0 | 2201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0177480 | AT1G34355.2 | 34.252 | 508 | 234 | 18 | 699 | 1163 | 985 | 1435 | 3.62e-55 | 211 |
| Msa0177480 | AT1G34355.2 | 46.774 | 124 | 54 | 2 | 19 | 130 | 20 | 143 | 6.20e-28 | 123 |
| Msa0177480 | AT1G34355.1 | 34.252 | 508 | 234 | 18 | 699 | 1163 | 990 | 1440 | 3.93e-55 | 211 |
| Msa0177480 | AT1G34355.1 | 46.774 | 124 | 54 | 2 | 19 | 130 | 20 | 143 | 6.71e-28 | 123 |
| Msa0177480 | AT1G34355.3 | 34.252 | 508 | 234 | 18 | 699 | 1163 | 831 | 1281 | 6.50e-55 | 210 |
| Msa0177480 | AT1G34355.3 | 46.774 | 124 | 54 | 2 | 19 | 130 | 20 | 143 | 6.80e-28 | 123 |
Find 228 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAAAACTAAGACTTAT+TGG | 0.182346 | 1_4:-64477353 | None:intergenic |
| TCTTTCAGCTGAATAGATTA+TGG | 0.201337 | 1_4:-64475756 | None:intergenic |
| AGTATTGATTTGTTGAAAAT+TGG | 0.204598 | 1_4:-64474619 | None:intergenic |
| AATATTGATTAGTTGAAAAT+TGG | 0.212674 | 1_4:-64474859 | None:intergenic |
| AATATTGATTAGTTGAAAAT+TGG | 0.212674 | 1_4:-64475099 | None:intergenic |
| AAAGCAATGCATTGAAAATA+TGG | 0.230349 | 1_4:+64474419 | Msa0177480:CDS |
| GAAGATGAAAATGATTCTTT+TGG | 0.236793 | 1_4:+64473829 | Msa0177480:CDS |
| CTACAGAACATTGGTTCTTT+AGG | 0.237507 | 1_4:+64473763 | Msa0177480:intron |
| CGATGATGTGGATGCATTAA+AGG | 0.244501 | 1_4:+64473217 | Msa0177480:CDS |
| ATCCATTCTAGTGCTTCTTT+TGG | 0.250107 | 1_4:-64476037 | None:intergenic |
| AGGGATTGTTGTTGTTGATT+AGG | 0.255051 | 1_4:-64472733 | None:intergenic |
| ATTAGTTGAAAATTGGTTAC+AGG | 0.255411 | 1_4:-64474852 | None:intergenic |
| ATTAGTTGAAAATTGGTTAC+AGG | 0.255411 | 1_4:-64475092 | None:intergenic |
| GTTTGATGAGATTCAGAATA+AGG | 0.265930 | 1_4:-64474243 | None:intergenic |
| CACTTCTTCTCTTCTGAATA+AGG | 0.267074 | 1_4:+64476424 | Msa0177480:CDS |
| AGAAGATTGTTGGTGCAATT+TGG | 0.275522 | 1_4:-64474073 | None:intergenic |
| TTCTTGAAAACAGTTAATAC+TGG | 0.278511 | 1_4:-64472760 | None:intergenic |
| GATTCTAATTTGTGTTCTTT+TGG | 0.279328 | 1_4:-64474489 | None:intergenic |
| GAATCATCCTTCGGGGAAAA+AGG | 0.279531 | 1_4:+64474120 | Msa0177480:CDS |
| GGGATTGTTGTTGTTGATTA+GGG | 0.281399 | 1_4:-64472732 | None:intergenic |
| AAACAGTTAATACTGGGATT+AGG | 0.288143 | 1_4:-64472753 | None:intergenic |
| TTCAGAGGCTGCTTTGGCCT+TGG | 0.290659 | 1_4:+64476666 | Msa0177480:CDS |
| TCAGCTGCAAAATCCATTCT+TGG | 0.291872 | 1_4:+64476199 | Msa0177480:CDS |
| ATTCTTCTACACAGCTTTCA+TGG | 0.306045 | 1_4:-64475391 | None:intergenic |
| TTCCATTCATGTGCTTCTCT+TGG | 0.308587 | 1_4:-64475917 | None:intergenic |
| CCTTGGACTGCTTCCGCAAC+TGG | 0.314000 | 1_4:-64474048 | None:intergenic |
| TTGCTACTGTTGATTCGTTA+TGG | 0.314122 | 1_4:+64474892 | Msa0177480:CDS |
| AACAGTTAATACTGGGATTA+GGG | 0.315056 | 1_4:-64472752 | None:intergenic |
| CCCTTTGTGACTTCGGAGTC+TGG | 0.316232 | 1_4:-64475808 | None:intergenic |
| TCTCTTCTCGATTTATCTTC+TGG | 0.319617 | 1_4:+64472955 | Msa0177480:CDS |
| CAATCTCTTGTTGCTGTGGC+TGG | 0.327577 | 1_4:+64475350 | Msa0177480:CDS |
| AGAAATGTTCACTCCAAATA+AGG | 0.327813 | 1_4:+64475616 | Msa0177480:CDS |
| CCTGCATCTTCTGAAGAAAA+TGG | 0.329906 | 1_4:+64474444 | Msa0177480:CDS |
| TTTGTCAGTCATAAGAGAAT+TGG | 0.333373 | 1_4:+64476606 | Msa0177480:intron |
| CTTTCAGCTGAATAGATTAT+GGG | 0.341493 | 1_4:-64475755 | None:intergenic |
| TGCTGCTGCTGATTCGTTAT+CGG | 0.346358 | 1_4:+64474653 | Msa0177480:CDS |
| CATCACAAGGTTTGATATTG+AGG | 0.347229 | 1_4:-64474719 | None:intergenic |
| AAGAGGACAATGTTGCAATT+TGG | 0.351936 | 1_4:-64472871 | None:intergenic |
| TTAAAATAAGTTGGAGGAGT+TGG | 0.352861 | 1_4:-64476772 | None:intergenic |
| AACTAGTGAAGATGTGTTTC+CGG | 0.354802 | 1_4:-64475057 | None:intergenic |
| CCTTCAAATTCAGATTCTTT+AGG | 0.355603 | 1_4:-64474165 | None:intergenic |
| AGAGGACAATGTTGCAATTT+GGG | 0.357729 | 1_4:-64472870 | None:intergenic |
| TTACAATCACTAATCAGTTC+TGG | 0.360096 | 1_4:+64476130 | Msa0177480:CDS |
| AAGGATTTCAGAGGCTGCTT+TGG | 0.362386 | 1_4:+64476660 | Msa0177480:CDS |
| CATGTGCTTCTCTTGGAGTC+AGG | 0.365094 | 1_4:-64475910 | None:intergenic |
| GGAAGCATGAAGCAACAAAT+TGG | 0.371153 | 1_4:+64476628 | Msa0177480:CDS |
| TCTTGAGTGTCGCAATACTA+TGG | 0.371876 | 1_4:+64476075 | Msa0177480:CDS |
| TGCTACTGTTGATTCGTTAT+GGG | 0.380103 | 1_4:+64474893 | Msa0177480:CDS |
| AGTGACTCAGGAAACTGATA+TGG | 0.380702 | 1_4:+64475295 | Msa0177480:CDS |
| TGTTATTGTTGTTGTTGTTA+AGG | 0.386601 | 1_4:-64472810 | None:intergenic |
| TGAAATATGTCCACAATTGC+TGG | 0.387136 | 1_4:-64476236 | None:intergenic |
| GATGAAATAGTTGAAGATAT+TGG | 0.388156 | 1_4:+64474396 | Msa0177480:CDS |
| TTGATCCTGAATCATCCTTC+GGG | 0.392446 | 1_4:+64474112 | Msa0177480:CDS |
| ATTCATCCTCCATTGAGCTT+TGG | 0.400341 | 1_4:-64476735 | None:intergenic |
| AGAACTGATTAGTGATTGTA+AGG | 0.403376 | 1_4:-64476128 | None:intergenic |
| AAGTCAGAGAAAATATTCTT+TGG | 0.407767 | 1_4:-64475584 | None:intergenic |
| ATTTGTAATGAGTAATTTGA+AGG | 0.408606 | 1_4:+64475535 | Msa0177480:CDS |
| CGTTTAATCATTCCACAATC+AGG | 0.409207 | 1_4:+64476491 | Msa0177480:CDS |
| GTTGGTGCAATTTGGAGCCT+TGG | 0.409350 | 1_4:-64474065 | None:intergenic |
| TCATCAACTGATTGCGTGTA+AGG | 0.412265 | 1_4:-64473919 | None:intergenic |
| CCTAAAGAATCTGAATTTGA+AGG | 0.417105 | 1_4:+64474165 | Msa0177480:CDS |
| TCTCCCGGCATCTCCACTTC+GGG | 0.422287 | 1_4:-64473973 | None:intergenic |
| ATTGATCCTGAATCATCCTT+CGG | 0.423616 | 1_4:+64474111 | Msa0177480:CDS |
| TCTTCAGCTTCTTCTTCCAA+TGG | 0.426132 | 1_4:+64472684 | Msa0177480:exon |
| TTGTCAGTCATAAGAGAATT+GGG | 0.427807 | 1_4:+64476607 | Msa0177480:intron |
| CACATAAACCTCTCAGAGAA+AGG | 0.429699 | 1_4:-64477185 | None:intergenic |
| ACATCTTCATTAAAATAAGT+TGG | 0.431226 | 1_4:-64476781 | None:intergenic |
| GCTCAATGGAGGATGAATTC+AGG | 0.436316 | 1_4:+64476740 | Msa0177480:CDS |
| ACGAAAGAGGAGCTGGGACT+TGG | 0.438267 | 1_4:+64476394 | Msa0177480:CDS |
| CATTCTCTGAAGAAAATGAT+AGG | 0.440116 | 1_4:+64474511 | Msa0177480:CDS |
| AGGCTGCTTTGGCCTTGGAA+TGG | 0.440472 | 1_4:+64476671 | Msa0177480:CDS |
| CATCACAAGGTTTGACATAG+AGG | 0.445355 | 1_4:-64474959 | None:intergenic |
| CATCACAAGGTTTGACATAG+AGG | 0.445355 | 1_4:-64475199 | None:intergenic |
| TCTTTCAGCTGAATAGATGA+TGG | 0.445871 | 1_4:-64475858 | None:intergenic |
| TCTTTCAGCTGAATAGATGA+TGG | 0.445871 | 1_4:-64475978 | None:intergenic |
| GAAAATAAAACATTGGATGC+AGG | 0.447963 | 1_4:-64477423 | None:intergenic |
| TTCGTTATGGGATGAAGAAA+AGG | 0.449256 | 1_4:+64474905 | Msa0177480:CDS |
| TAAGGCTGCGAGTGCACCTC+AGG | 0.449836 | 1_4:+64475463 | Msa0177480:CDS |
| TTCGTTATCAAATGAAGAAA+AGG | 0.451064 | 1_4:+64475145 | Msa0177480:CDS |
| TAAATGTGACGTGGAGTTCA+AGG | 0.451089 | 1_4:+64474692 | Msa0177480:CDS |
| TTATGTGCCCTTTGTGACTT+CGG | 0.452664 | 1_4:-64475815 | None:intergenic |
| CCACAGCAACAAGAGATTGC+AGG | 0.457985 | 1_4:-64475346 | None:intergenic |
| TTAGAATATATTGTAACTAC+TGG | 0.459459 | 1_4:+64474192 | Msa0177480:CDS |
| CTCTCCCGGCATCTCCACTT+CGG | 0.463114 | 1_4:-64473974 | None:intergenic |
| TGTGATATCTTACAGATGGC+TGG | 0.463668 | 1_4:-64476270 | None:intergenic |
| GAGAAAATATTCTTTGGCAT+TGG | 0.463918 | 1_4:-64475578 | None:intergenic |
| AGAAACTTCCTCGTCAGTAT+TGG | 0.464485 | 1_4:-64474265 | None:intergenic |
| TGAATGTGATGAGGAGTTCA+AGG | 0.469592 | 1_4:+64474932 | Msa0177480:CDS |
| TGAATGTGATGAGGAGTTCA+AGG | 0.469592 | 1_4:+64475172 | Msa0177480:CDS |
| CAAATGTTTCATCATTAGAC+TGG | 0.470421 | 1_4:-64473807 | None:intergenic |
| GTGCAGAACGAAAGAGGAGC+TGG | 0.472569 | 1_4:+64476387 | Msa0177480:CDS |
| AAGGTGATAGCTTTCAGCTT+GGG | 0.474183 | 1_4:+64473153 | Msa0177480:CDS |
| CTCCAAAAGAAGCACTAGAA+TGG | 0.474494 | 1_4:+64476035 | Msa0177480:CDS |
| TGCTGTTTGCCATCCAAGGC+GGG | 0.480383 | 1_4:+64477275 | Msa0177480:CDS |
| ACAAATTTAGTGTCAACATC+AGG | 0.480928 | 1_4:-64475518 | None:intergenic |
| ATTATGTGCCCTTTGTGACT+TGG | 0.481957 | 1_4:-64475714 | None:intergenic |
| GTGCACCTCAGGATCGAACT+TGG | 0.484676 | 1_4:+64475474 | Msa0177480:CDS |
| TTCGTTATCGGATGAAGAAA+AGG | 0.484888 | 1_4:+64474665 | Msa0177480:CDS |
| CTCCAAGAGAAGCACATGAA+TGG | 0.486333 | 1_4:+64475915 | Msa0177480:CDS |
| GAAGATGTGTTTCCGGATGA+AGG | 0.490548 | 1_4:-64475050 | None:intergenic |
| AGAGAAACAGAGCGAGAAGA+AGG | 0.496421 | 1_4:-64472937 | None:intergenic |
| CTTTCTCTGAGAGGTTTATG+TGG | 0.496638 | 1_4:+64477186 | Msa0177480:CDS |
| ACAAAGATCACATAATTTGA+AGG | 0.496885 | 1_4:+64475943 | Msa0177480:CDS |
| ATTAAGTGACTTTGTCTGAA+AGG | 0.501365 | 1_4:-64474787 | None:intergenic |
| TGATGAAGAAGGCAGCTCAC+TGG | 0.504742 | 1_4:+64474977 | Msa0177480:CDS |
| GACTAATGCTAGGGTGAAAG+AGG | 0.506692 | 1_4:-64472888 | None:intergenic |
| TCAGCTTGGGAGTTCAAGTA+GGG | 0.506969 | 1_4:+64473166 | Msa0177480:CDS |
| TTGTCCCGAAGTGGAGATGC+CGG | 0.507085 | 1_4:+64473969 | Msa0177480:CDS |
| TGGTGTGAGCGTTGATTTGA+AGG | 0.510059 | 1_4:+64473130 | Msa0177480:CDS |
| AAGCAATGCATTGAAAATAT+GGG | 0.516136 | 1_4:+64474420 | Msa0177480:CDS |
| GTGATATCTTACAGATGGCT+GGG | 0.516276 | 1_4:-64476269 | None:intergenic |
| GGCTTTGGCCTACAGAACAT+TGG | 0.516629 | 1_4:+64473754 | Msa0177480:intron |
| TGCGAGTGAAAGGTGTTTGT+GGG | 0.517986 | 1_4:-64475650 | None:intergenic |
| CTTTAGGTTGTGATGATGAA+AGG | 0.518310 | 1_4:+64473779 | Msa0177480:CDS |
| GAGTCACTTAATCCTTCATC+CGG | 0.518372 | 1_4:+64475038 | Msa0177480:CDS |
| GAAGCACTAGAATGGATGTC+AGG | 0.520229 | 1_4:+64476043 | Msa0177480:CDS |
| GTCAAACCTTGTGATGAAGA+AGG | 0.520624 | 1_4:+64475206 | Msa0177480:CDS |
| GTATTAGTGCAGAACGAAAG+AGG | 0.522828 | 1_4:+64476381 | Msa0177480:CDS |
| TCACAAGCAACAGTATTCAC+TGG | 0.525982 | 1_4:+64474374 | Msa0177480:CDS |
| TATAGAAGAAAAGATAATGT+TGG | 0.526463 | 1_4:+64476823 | Msa0177480:CDS |
| TATATTGAAGAGCACAATCA+AGG | 0.526917 | 1_4:-64476804 | None:intergenic |
| CTGCGAGTGAAAGGTGTTTG+TGG | 0.527257 | 1_4:-64475651 | None:intergenic |
| ACTTAATCCTTCAGTGACTC+AGG | 0.531278 | 1_4:+64475283 | Msa0177480:CDS |
| TCTGACAGTGACACCAAGAA+TGG | 0.531789 | 1_4:-64476212 | None:intergenic |
| TCTGAATAAGGAGTCAAGAA+AGG | 0.534111 | 1_4:+64476436 | Msa0177480:CDS |
| GAGTAATTCGAATCTGAAGA+TGG | 0.535071 | 1_4:-64472915 | None:intergenic |
| AAGGCTTTGCAGCTTCTACA+AGG | 0.535155 | 1_4:+64476455 | Msa0177480:CDS |
| CAAAACAAATTAGTCTCTCC+CGG | 0.535363 | 1_4:-64473988 | None:intergenic |
| TCTTGAAAACAGTTAATACT+GGG | 0.538609 | 1_4:-64472759 | None:intergenic |
| AAGCAGCTTCAAACCCGCCT+TGG | 0.540005 | 1_4:-64477288 | None:intergenic |
| TTCAGCTTGGGAGTTCAAGT+AGG | 0.540418 | 1_4:+64473165 | Msa0177480:CDS |
| AGCTTCAAACCCGCCTTGGA+TGG | 0.540632 | 1_4:-64477284 | None:intergenic |
| CCTGCAATCTCTTGTTGCTG+TGG | 0.541394 | 1_4:+64475346 | Msa0177480:CDS |
| TTTCTCTGAGAGGTTTATGT+GGG | 0.541565 | 1_4:+64477187 | Msa0177480:CDS |
| AAAATAAAACATTGGATGCA+GGG | 0.542325 | 1_4:-64477422 | None:intergenic |
| TCTCATAAACTGCGAGTGAA+AGG | 0.542445 | 1_4:-64475660 | None:intergenic |
| ATCAAACCTTGTGATGAAGA+AGG | 0.542929 | 1_4:+64474726 | Msa0177480:CDS |
| TCGCAGTTTATGAGAAAGAA+AGG | 0.543292 | 1_4:+64475668 | Msa0177480:CDS |
| TAAAAGTTCCAAGTCACAAA+GGG | 0.544034 | 1_4:+64475706 | Msa0177480:CDS |
| AGATGGAAACGACTAATGCT+AGG | 0.544635 | 1_4:-64472898 | None:intergenic |
| GTCAAACCTTGTGATGAAGA+AGG | 0.544666 | 1_4:+64474966 | Msa0177480:CDS |
| GATTCATATCCAAAGCTCAA+TGG | 0.546480 | 1_4:+64476726 | Msa0177480:CDS |
| CAGGGATGTTAAAACTTGAA+AGG | 0.547311 | 1_4:-64477404 | None:intergenic |
| GAATGGATTGAAGAATGCAT+AGG | 0.549446 | 1_4:+64476688 | Msa0177480:CDS |
| TCTGTGGATTCACTATCTGA+TGG | 0.551969 | 1_4:+64474285 | Msa0177480:CDS |
| CTCTTCCAAGTTCGATCCTG+AGG | 0.552493 | 1_4:-64475479 | None:intergenic |
| CTTTCAGCTGAATAGATGAT+GGG | 0.553266 | 1_4:-64475857 | None:intergenic |
| CTTTCAGCTGAATAGATGAT+GGG | 0.553266 | 1_4:-64475977 | None:intergenic |
| CCCTTAAAACCACATCATCT+CGG | 0.553361 | 1_4:-64477244 | None:intergenic |
| ATATTGCTGTTTGCCATCCA+AGG | 0.553553 | 1_4:+64477271 | Msa0177480:CDS |
| TCATTATTAGTACCTGATTG+TGG | 0.553792 | 1_4:-64476503 | None:intergenic |
| TTATTGAATGTGCTAATGTA+AGG | 0.554262 | 1_4:-64477470 | None:intergenic |
| ACAAAGGGCACATAATTTGA+AGG | 0.555737 | 1_4:+64475721 | Msa0177480:CDS |
| ACAAAGGGCACATAATTTGA+AGG | 0.555737 | 1_4:+64475823 | Msa0177480:CDS |
| CAACTTGAAAATCAAATCCA+TGG | 0.556119 | 1_4:+64476873 | Msa0177480:CDS |
| CACAGCAACAAGAGATTGCA+GGG | 0.558568 | 1_4:-64475345 | None:intergenic |
| AATGGATTGAAGAATGCATA+GGG | 0.559809 | 1_4:+64476689 | Msa0177480:CDS |
| AGTTGACATCATCACTAAGA+AGG | 0.560103 | 1_4:-64476855 | None:intergenic |
| TGTCCCGAAGTGGAGATGCC+GGG | 0.561554 | 1_4:+64473970 | Msa0177480:CDS |
| GAGCTGCCTTCTTCATCACA+AGG | 0.561745 | 1_4:-64474972 | None:intergenic |
| GTGGTACAGTGCATGGAACA+TGG | 0.562023 | 1_4:+64473084 | Msa0177480:intron |
| GAAACGACAATTGAAGCCAT+TGG | 0.562412 | 1_4:-64472700 | None:intergenic |
| GTAATGAAATACCTTTGCCA+TGG | 0.562764 | 1_4:-64476890 | None:intergenic |
| GAAGGTGATAGCTTTCAGCT+TGG | 0.564939 | 1_4:+64473152 | Msa0177480:CDS |
| GCTCTCCTCGAGGACTGACT+TGG | 0.566083 | 1_4:+64477216 | Msa0177480:CDS |
| GCATTCTTCAATCCATTCCA+AGG | 0.566592 | 1_4:-64476683 | None:intergenic |
| ATTAAGTGACTCTGTCTGAA+AGG | 0.568185 | 1_4:-64475027 | None:intergenic |
| ATTAAGTGACTCTGTCTGAA+AGG | 0.568185 | 1_4:-64475267 | None:intergenic |
| CCAGACTCCGAAGTCACAAA+GGG | 0.569092 | 1_4:+64475808 | Msa0177480:CDS |
| ACATAAACCTCTCAGAGAAA+GGG | 0.573006 | 1_4:-64477184 | None:intergenic |
| ATAAACTGAAAATAAAACAT+TGG | 0.574826 | 1_4:-64477430 | None:intergenic |
| GAAAATCAAATCCATGGCAA+AGG | 0.575168 | 1_4:+64476879 | Msa0177480:CDS |
| ACTGTCAGATCCAGCAATTG+TGG | 0.576445 | 1_4:+64476226 | Msa0177480:CDS |
| ATAGTATTGCGACACTCAAG+AGG | 0.576921 | 1_4:-64476073 | None:intergenic |
| TCTTCATTAAAATAAGTTGG+AGG | 0.578590 | 1_4:-64476778 | None:intergenic |
| TTGACAAAATATCACTACCA+AGG | 0.583571 | 1_4:-64475433 | None:intergenic |
| TGACAAAATATCACTACCAA+GGG | 0.584442 | 1_4:-64475432 | None:intergenic |
| AGGTTGTGATGATGAAAGGA+AGG | 0.584831 | 1_4:+64473783 | Msa0177480:CDS |
| AGCAAGAGTCTTTAATTCTG+AGG | 0.587680 | 1_4:+64474215 | Msa0177480:CDS |
| ACTGAGACATCATGTTGTAA+TGG | 0.588049 | 1_4:+64473853 | Msa0177480:CDS |
| TCAGTTTCCTGAGTCACTGA+AGG | 0.588129 | 1_4:-64475290 | None:intergenic |
| TACTGACGAGGAAGTTTCTG+TGG | 0.588152 | 1_4:+64474269 | Msa0177480:CDS |
| GTGAGCGTTGATTTGAAGGA+AGG | 0.589475 | 1_4:+64473134 | Msa0177480:CDS |
| GGAATTAAGAAAGAAGAGAG+TGG | 0.590192 | 1_4:+64476096 | Msa0177480:CDS |
| TAGTGAACCCTTTCTCTGAG+AGG | 0.591206 | 1_4:+64477177 | Msa0177480:CDS |
| AAACATATGTATTCCAGTTG+CGG | 0.592569 | 1_4:+64474035 | Msa0177480:CDS |
| GTAGAGGGAAGCTTAACCCT+TGG | 0.597107 | 1_4:+64475416 | Msa0177480:CDS |
| TGTATCTCAATTCGATGATG+TGG | 0.598431 | 1_4:+64473205 | Msa0177480:CDS |
| TTGGTCTTGCCGAGATGATG+TGG | 0.598782 | 1_4:+64477235 | Msa0177480:CDS |
| GGGTGAAGCTTGTCCCGAAG+TGG | 0.599537 | 1_4:+64473960 | Msa0177480:CDS |
| AAAGGAAAATGAATGTGATG+AGG | 0.600290 | 1_4:+64474923 | Msa0177480:CDS |
| AAAGGAAAATGAATGTGATG+AGG | 0.600290 | 1_4:+64475163 | Msa0177480:CDS |
| GAGTTACCTTCTTCATCACA+AGG | 0.605119 | 1_4:-64474732 | None:intergenic |
| GAGTTACCTTCTTCATCACA+AGG | 0.605119 | 1_4:-64475212 | None:intergenic |
| CTGTGTAGAAGAATCAGTAG+AGG | 0.605621 | 1_4:+64475400 | Msa0177480:CDS |
| TAAGGATGATGATGTTCTTG+AGG | 0.607825 | 1_4:-64472792 | None:intergenic |
| TGAAGCTGATAACATGCAGA+TGG | 0.610016 | 1_4:+64473939 | Msa0177480:CDS |
| TAAGAAAGAAGAGAGTGGAA+CGG | 0.612306 | 1_4:+64476101 | Msa0177480:CDS |
| CCAGTTGCGGAAGCAGTCCA+AGG | 0.613914 | 1_4:+64474048 | Msa0177480:CDS |
| TGTGTAGAAGAATCAGTAGA+GGG | 0.614528 | 1_4:+64475401 | Msa0177480:CDS |
| GTAAAAGTTCCAAGTCACAA+AGG | 0.617712 | 1_4:+64475705 | Msa0177480:CDS |
| ACCAGACTCCGAAGTCACAA+AGG | 0.621726 | 1_4:+64475807 | Msa0177480:CDS |
| GATGATCAAATCCTCCTCGT+TGG | 0.621778 | 1_4:+64472841 | Msa0177480:CDS |
| TGCAGAACGAAAGAGGAGCT+GGG | 0.623266 | 1_4:+64476388 | Msa0177480:CDS |
| GATGGAAACGACTAATGCTA+GGG | 0.623975 | 1_4:-64472897 | None:intergenic |
| TGATGAAGAAGGTAACTCAC+TGG | 0.624546 | 1_4:+64474737 | Msa0177480:CDS |
| AGCTTCTACAAGGTCTCAAG+AGG | 0.631225 | 1_4:+64476465 | Msa0177480:CDS |
| CAATCACTAATCAGTTCTGG+AGG | 0.638402 | 1_4:+64476133 | Msa0177480:CDS |
| AATGCATAGGGAAGACAAAG+TGG | 0.644872 | 1_4:+64476701 | Msa0177480:CDS |
| TTGCTGTTTGCCATCCAAGG+CGG | 0.648855 | 1_4:+64477274 | Msa0177480:CDS |
| TGGTACAGTGCATGGAACAT+GGG | 0.649916 | 1_4:+64473085 | Msa0177480:intron |
| TCATATCCAAAGCTCAATGG+AGG | 0.659133 | 1_4:+64476729 | Msa0177480:CDS |
| GAACTGATTAGTGATTGTAA+GGG | 0.660725 | 1_4:-64476127 | None:intergenic |
| TGTGGTAGAAAGCTTGAGCA+TGG | 0.667485 | 1_4:+64473110 | Msa0177480:CDS |
| TCAACTGATTGCGTGTAAGG+TGG | 0.672318 | 1_4:-64473916 | None:intergenic |
| GCATAGGGAAGACAAAGTGG+TGG | 0.672552 | 1_4:+64476704 | Msa0177480:CDS |
| GTGCATGGAACATGGGTGTG+TGG | 0.679303 | 1_4:+64473092 | Msa0177480:intron |
| GAAGCTGATAACATGCAGAT+GGG | 0.679916 | 1_4:+64473940 | Msa0177480:CDS |
| TTGGGTGTCGACCAACGAGG+AGG | 0.683925 | 1_4:-64472852 | None:intergenic |
| ATTGCACCAACAATCTTCTG+CGG | 0.685341 | 1_4:+64474077 | Msa0177480:CDS |
| AAAGGAAAATAAATGTGACG+TGG | 0.686635 | 1_4:+64474683 | Msa0177480:CDS |
| AATGGTGAAAATAAACTCTG+TGG | 0.690486 | 1_4:+64473871 | Msa0177480:CDS |
| TGATCCTGAATCATCCTTCG+GGG | 0.698263 | 1_4:+64474113 | Msa0177480:CDS |
| GCGAGTGAAAGGTGTTTGTG+GGG | 0.700346 | 1_4:-64475649 | None:intergenic |
| CAAGACCAAGTCAGTCCTCG+AGG | 0.702653 | 1_4:-64477221 | None:intergenic |
| TCATCAAACCAATACTGACG+AGG | 0.704129 | 1_4:+64474257 | Msa0177480:CDS |
| TGGGCTAACAGCTCTCCTCG+AGG | 0.715866 | 1_4:+64477206 | Msa0177480:CDS |
| AATTTGGGTGTCGACCAACG+AGG | 0.791626 | 1_4:-64472855 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAATAGTTTAGTTTTTA+AGG | + | chr1_4:64473589-64473608 | Msa0177480:intron | 10.0% |
| !! | AAAGAAAAAAAAAGAGAAAA+AGG | - | chr1_4:64472996-64473015 | None:intergenic | 15.0% |
| !! | AAAAGAAAGAATATTCAAAA+AGG | - | chr1_4:64473019-64473038 | None:intergenic | 15.0% |
| !!! | TTTCATTTGTTATTCTTTTT+TGG | + | chr1_4:64473037-64473056 | Msa0177480:intron | 15.0% |
| !!! | AATATTGATTAGTTGAAAAT+TGG | - | chr1_4:64474862-64474881 | None:intergenic | 15.0% |
| !!! | AATATTGATTAGTTGAAAAT+TGG | - | chr1_4:64474862-64474881 | None:intergenic | 15.0% |
| !! | ATAAACTGAAAATAAAACAT+TGG | - | chr1_4:64477433-64477452 | None:intergenic | 15.0% |
| !!! | TTTTACTCTTTTTTCAATTC+TGG | + | chr1_4:64473427-64473446 | Msa0177480:intron | 20.0% |
| !!! | TTTACTCTTTTTTCAATTCT+GGG | + | chr1_4:64473428-64473447 | Msa0177480:intron | 20.0% |
| !!! | TTTTTTTTTGACCAAATCTT+TGG | + | chr1_4:64473707-64473726 | Msa0177480:intron | 20.0% |
| !! | AAAAACAAAAACCAAAGATT+TGG | - | chr1_4:64473721-64473740 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCTCTTTATCTTT+TGG | + | chr1_4:64473733-64473752 | Msa0177480:intron | 20.0% |
| !! | TTAGAATATATTGTAACTAC+TGG | + | chr1_4:64474192-64474211 | Msa0177480:CDS | 20.0% |
| !!! | AGTATTGATTTGTTGAAAAT+TGG | - | chr1_4:64474622-64474641 | None:intergenic | 20.0% |
| !! | ATTTGTAATGAGTAATTTGA+AGG | + | chr1_4:64475535-64475554 | Msa0177480:CDS | 20.0% |
| !! | AGCAATAAGCATATATAAAA+AGG | - | chr1_4:64476339-64476358 | None:intergenic | 20.0% |
| !!! | AACAAATTGGAATTTTTAGA+AGG | + | chr1_4:64476641-64476660 | Msa0177480:CDS | 20.0% |
| !! | ACATCTTCATTAAAATAAGT+TGG | - | chr1_4:64476784-64476803 | None:intergenic | 20.0% |
| !! | TATAGAAGAAAAGATAATGT+TGG | + | chr1_4:64476823-64476842 | Msa0177480:CDS | 20.0% |
| !! | AAATGAAAACTAAGACTTAT+TGG | - | chr1_4:64477356-64477375 | None:intergenic | 20.0% |
| ! | TCTTGAAAACAGTTAATACT+GGG | - | chr1_4:64472762-64472781 | None:intergenic | 25.0% |
| ! | TTCTTGAAAACAGTTAATAC+TGG | - | chr1_4:64472763-64472782 | None:intergenic | 25.0% |
| !! | TGTTATTGTTGTTGTTGTTA+AGG | - | chr1_4:64472813-64472832 | None:intergenic | 25.0% |
| !!! | ATTCTTTTTTGGAATCTTGA+TGG | + | chr1_4:64473048-64473067 | Msa0177480:intron | 25.0% |
| !!! | TTCTTTTTTGGAATCTTGAT+GGG | + | chr1_4:64473049-64473068 | Msa0177480:intron | 25.0% |
| !! | TTTTCAATTCTGGGTTTAAT+TGG | + | chr1_4:64473437-64473456 | Msa0177480:intron | 25.0% |
| !!! | TGTCCATTTTTATTCAATTC+TGG | + | chr1_4:64473517-64473536 | Msa0177480:intron | 25.0% |
| !!! | GTCCATTTTTATTCAATTCT+GGG | + | chr1_4:64473518-64473537 | Msa0177480:intron | 25.0% |
| ! | AACCCAGAATTGAATAAAAA+TGG | - | chr1_4:64473523-64473542 | None:intergenic | 25.0% |
| !! | TAGAATTTTGTGAGTTACAT+AGG | + | chr1_4:64473547-64473566 | Msa0177480:intron | 25.0% |
| !!! | TATTGTTGTTTACAAGTTTG+AGG | + | chr1_4:64473612-64473631 | Msa0177480:intron | 25.0% |
| ! | ACAATGTTTGATGTTATCTT+TGG | + | chr1_4:64473682-64473701 | Msa0177480:intron | 25.0% |
| !! | GAAGATGAAAATGATTCTTT+TGG | + | chr1_4:64473829-64473848 | Msa0177480:CDS | 25.0% |
| !!! | TAATTTGTTTTGCACATTGA+GGG | + | chr1_4:64473999-64474018 | Msa0177480:CDS | 25.0% |
| ! | GATGAAATAGTTGAAGATAT+TGG | + | chr1_4:64474396-64474415 | Msa0177480:CDS | 25.0% |
| ! | AAAGCAATGCATTGAAAATA+TGG | + | chr1_4:64474419-64474438 | Msa0177480:CDS | 25.0% |
| ! | AAGCAATGCATTGAAAATAT+GGG | + | chr1_4:64474420-64474439 | Msa0177480:CDS | 25.0% |
| !!! | GATTCTAATTTGTGTTCTTT+TGG | - | chr1_4:64474492-64474511 | None:intergenic | 25.0% |
| !! | AACTAGTGAATATGTGTTTT+CGG | - | chr1_4:64474820-64474839 | None:intergenic | 25.0% |
| ! | ATTAGTTGAAAATTGGTTAC+AGG | - | chr1_4:64474855-64474874 | None:intergenic | 25.0% |
| ! | ATTAGTTGAAAATTGGTTAC+AGG | - | chr1_4:64474855-64474874 | None:intergenic | 25.0% |
| ! | TTCGTTATCAAATGAAGAAA+AGG | + | chr1_4:64475145-64475164 | Msa0177480:CDS | 25.0% |
| !! | TATTTTGTCAAGAAGAGATA+AGG | + | chr1_4:64475445-64475464 | Msa0177480:CDS | 25.0% |
| ! | AAGTCAGAGAAAATATTCTT+TGG | - | chr1_4:64475587-64475606 | None:intergenic | 25.0% |
| !! | AAAGAATATTTTCTCTGACT+TGG | + | chr1_4:64475586-64475605 | Msa0177480:CDS | 25.0% |
| ! | ACAAAGATCACATAATTTGA+AGG | + | chr1_4:64475943-64475962 | Msa0177480:CDS | 25.0% |
| ! | TATTTGTGATATCTTACAGA+TGG | - | chr1_4:64476277-64476296 | None:intergenic | 25.0% |
| !!! | AATGTTGATGCTTTTGAAAT+TGG | + | chr1_4:64476565-64476584 | Msa0177480:intron | 25.0% |
| !!! | AATTTTTAGAAGGATTTCAG+AGG | + | chr1_4:64476651-64476670 | Msa0177480:CDS | 25.0% |
| !! | TCTTCATTAAAATAAGTTGG+AGG | - | chr1_4:64476781-64476800 | None:intergenic | 25.0% |
| !!! | TTTTTTTAAAAACTGCTGCA+GGG | + | chr1_4:64477116-64477135 | Msa0177480:intron | 25.0% |
| ! | AAAATAAAACATTGGATGCA+GGG | - | chr1_4:64477425-64477444 | None:intergenic | 25.0% |
| AACAGTTAATACTGGGATTA+GGG | - | chr1_4:64472755-64472774 | None:intergenic | 30.0% | |
| AAACAGTTAATACTGGGATT+AGG | - | chr1_4:64472756-64472775 | None:intergenic | 30.0% | |
| ! | TGGAATTTTGTTAGTTGCTT+AGG | + | chr1_4:64473362-64473381 | Msa0177480:intron | 30.0% |
| ! | GGAATTTTGTTAGTTGCTTA+GGG | + | chr1_4:64473363-64473382 | Msa0177480:intron | 30.0% |
| TTGTGTGAATTGTGATAGTT+AGG | + | chr1_4:64473462-64473481 | Msa0177480:intron | 30.0% | |
| TGTGTGAATTGTGATAGTTA+GGG | + | chr1_4:64473463-64473482 | Msa0177480:intron | 30.0% | |
| !!! | TTCTCTTTATCTTTTGGCTT+TGG | + | chr1_4:64473739-64473758 | Msa0177480:intron | 30.0% |
| CAAATGTTTCATCATTAGAC+TGG | - | chr1_4:64473810-64473829 | None:intergenic | 30.0% | |
| AATGGTGAAAATAAACTCTG+TGG | + | chr1_4:64473871-64473890 | Msa0177480:CDS | 30.0% | |
| !!! | CTAATTTGTTTTGCACATTG+AGG | + | chr1_4:64473998-64474017 | Msa0177480:CDS | 30.0% |
| AAACATATGTATTCCAGTTG+CGG | + | chr1_4:64474035-64474054 | Msa0177480:CDS | 30.0% | |
| CCTTCAAATTCAGATTCTTT+AGG | - | chr1_4:64474168-64474187 | None:intergenic | 30.0% | |
| CCTAAAGAATCTGAATTTGA+AGG | + | chr1_4:64474165-64474184 | Msa0177480:CDS | 30.0% | |
| GTTTGATGAGATTCAGAATA+AGG | - | chr1_4:64474246-64474265 | None:intergenic | 30.0% | |
| ! | CATTCTCTGAAGAAAATGAT+AGG | + | chr1_4:64474511-64474530 | Msa0177480:CDS | 30.0% |
| !!! | TGACGATATTTTAACTAGTG+TGG | + | chr1_4:64474536-64474555 | Msa0177480:CDS | 30.0% |
| AAAGGAAAATAAATGTGACG+TGG | + | chr1_4:64474683-64474702 | Msa0177480:CDS | 30.0% | |
| ATTAAGTGACTTTGTCTGAA+AGG | - | chr1_4:64474790-64474809 | None:intergenic | 30.0% | |
| AAAGGAAAATGAATGTGATG+AGG | + | chr1_4:64474923-64474942 | Msa0177480:CDS | 30.0% | |
| AAAGGAAAATGAATGTGATG+AGG | + | chr1_4:64474923-64474942 | Msa0177480:CDS | 30.0% | |
| TGACAAAATATCACTACCAA+GGG | - | chr1_4:64475435-64475454 | None:intergenic | 30.0% | |
| TTGACAAAATATCACTACCA+AGG | - | chr1_4:64475436-64475455 | None:intergenic | 30.0% | |
| ACAAATTTAGTGTCAACATC+AGG | - | chr1_4:64475521-64475540 | None:intergenic | 30.0% | |
| GAGAAAATATTCTTTGGCAT+TGG | - | chr1_4:64475581-64475600 | None:intergenic | 30.0% | |
| AGAAATGTTCACTCCAAATA+AGG | + | chr1_4:64475616-64475635 | Msa0177480:CDS | 30.0% | |
| TAAAAGTTCCAAGTCACAAA+GGG | + | chr1_4:64475706-64475725 | Msa0177480:CDS | 30.0% | |
| CTTTCAGCTGAATAGATTAT+GGG | - | chr1_4:64475758-64475777 | None:intergenic | 30.0% | |
| TCTTTCAGCTGAATAGATTA+TGG | - | chr1_4:64475759-64475778 | None:intergenic | 30.0% | |
| GAACTGATTAGTGATTGTAA+GGG | - | chr1_4:64476130-64476149 | None:intergenic | 30.0% | |
| AGAACTGATTAGTGATTGTA+AGG | - | chr1_4:64476131-64476150 | None:intergenic | 30.0% | |
| TTACAATCACTAATCAGTTC+TGG | + | chr1_4:64476130-64476149 | Msa0177480:CDS | 30.0% | |
| GAAAAAGGACTAGAAGAAAA+AGG | - | chr1_4:64476181-64476200 | None:intergenic | 30.0% | |
| TCATTATTAGTACCTGATTG+TGG | - | chr1_4:64476506-64476525 | None:intergenic | 30.0% | |
| TTTGTCAGTCATAAGAGAAT+TGG | + | chr1_4:64476606-64476625 | Msa0177480:intron | 30.0% | |
| TTGTCAGTCATAAGAGAATT+GGG | + | chr1_4:64476607-64476626 | Msa0177480:intron | 30.0% | |
| !! | AATGGATTGAAGAATGCATA+GGG | + | chr1_4:64476689-64476708 | Msa0177480:CDS | 30.0% |
| ! | TTAAAATAAGTTGGAGGAGT+TGG | - | chr1_4:64476775-64476794 | None:intergenic | 30.0% |
| ! | TATATTGAAGAGCACAATCA+AGG | - | chr1_4:64476807-64476826 | None:intergenic | 30.0% |
| CAACTTGAAAATCAAATCCA+TGG | + | chr1_4:64476873-64476892 | Msa0177480:CDS | 30.0% | |
| GATAATTATTTCCCATGAGA+GGG | - | chr1_4:64476915-64476934 | None:intergenic | 30.0% | |
| AGATAATTATTTCCCATGAG+AGG | - | chr1_4:64476916-64476935 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTAAAAACTGCTGC+AGG | + | chr1_4:64477115-64477134 | Msa0177480:intron | 30.0% |
| !!! | TTTTTTAAAAACTGCTGCAG+GGG | + | chr1_4:64477117-64477136 | Msa0177480:intron | 30.0% |
| GAAAATAAAACATTGGATGC+AGG | - | chr1_4:64477426-64477445 | None:intergenic | 30.0% | |
| ! | GGGATTGTTGTTGTTGATTA+GGG | - | chr1_4:64472735-64472754 | None:intergenic | 35.0% |
| ! | AGGGATTGTTGTTGTTGATT+AGG | - | chr1_4:64472736-64472755 | None:intergenic | 35.0% |
| ! | TAAGGATGATGATGTTCTTG+AGG | - | chr1_4:64472795-64472814 | None:intergenic | 35.0% |
| AGAGGACAATGTTGCAATTT+GGG | - | chr1_4:64472873-64472892 | None:intergenic | 35.0% | |
| AAGAGGACAATGTTGCAATT+TGG | - | chr1_4:64472874-64472893 | None:intergenic | 35.0% | |
| GAGTAATTCGAATCTGAAGA+TGG | - | chr1_4:64472918-64472937 | None:intergenic | 35.0% | |
| TCTCTTCTCGATTTATCTTC+TGG | + | chr1_4:64472955-64472974 | Msa0177480:CDS | 35.0% | |
| !!! | TGATGGGTTTTTATTGTGTG+TGG | + | chr1_4:64473065-64473084 | Msa0177480:intron | 35.0% |
| TGTATCTCAATTCGATGATG+TGG | + | chr1_4:64473205-64473224 | Msa0177480:CDS | 35.0% | |
| CTTGTTCAGTTGTGTTCAAT+TGG | + | chr1_4:64473342-64473361 | Msa0177480:intron | 35.0% | |
| ! | TGTTGTTTACAAGTTTGAGG+AGG | + | chr1_4:64473615-64473634 | Msa0177480:intron | 35.0% |
| CTAAAGAACCAATGTTCTGT+AGG | - | chr1_4:64473765-64473784 | None:intergenic | 35.0% | |
| !! | CTACAGAACATTGGTTCTTT+AGG | + | chr1_4:64473763-64473782 | Msa0177480:intron | 35.0% |
| !! | CTTTAGGTTGTGATGATGAA+AGG | + | chr1_4:64473779-64473798 | Msa0177480:CDS | 35.0% |
| ACTGAGACATCATGTTGTAA+TGG | + | chr1_4:64473853-64473872 | Msa0177480:CDS | 35.0% | |
| ! | CAAAACAAATTAGTCTCTCC+CGG | - | chr1_4:64473991-64474010 | None:intergenic | 35.0% |
| AGAAGATTGTTGGTGCAATT+TGG | - | chr1_4:64474076-64474095 | None:intergenic | 35.0% | |
| ATTGATCCTGAATCATCCTT+CGG | + | chr1_4:64474111-64474130 | Msa0177480:CDS | 35.0% | |
| AGCAAGAGTCTTTAATTCTG+AGG | + | chr1_4:64474215-64474234 | Msa0177480:CDS | 35.0% | |
| CTATCTGATGGAGAAAAAGA+AGG | + | chr1_4:64474297-64474316 | Msa0177480:CDS | 35.0% | |
| TTCGTTATCGGATGAAGAAA+AGG | + | chr1_4:64474665-64474684 | Msa0177480:CDS | 35.0% | |
| CATCACAAGGTTTGATATTG+AGG | - | chr1_4:64474722-64474741 | None:intergenic | 35.0% | |
| ATCAAACCTTGTGATGAAGA+AGG | + | chr1_4:64474726-64474745 | Msa0177480:CDS | 35.0% | |
| ! | GAATATGTGTTTTCGGATAC+AGG | - | chr1_4:64474813-64474832 | None:intergenic | 35.0% |
| !! | TTGCTACTGTTGATTCGTTA+TGG | + | chr1_4:64474892-64474911 | Msa0177480:CDS | 35.0% |
| !! | TGCTACTGTTGATTCGTTAT+GGG | + | chr1_4:64474893-64474912 | Msa0177480:CDS | 35.0% |
| TTCGTTATGGGATGAAGAAA+AGG | + | chr1_4:64474905-64474924 | Msa0177480:CDS | 35.0% | |
| ATTAAGTGACTCTGTCTGAA+AGG | - | chr1_4:64475030-64475049 | None:intergenic | 35.0% | |
| AACTAGTGAAGATGTGTTTC+CGG | - | chr1_4:64475060-64475079 | None:intergenic | 35.0% | |
| ATTAAGTGACTCTGTCTGAA+AGG | - | chr1_4:64475030-64475049 | None:intergenic | 35.0% | |
| ATTCTTCTACACAGCTTTCA+TGG | - | chr1_4:64475394-64475413 | None:intergenic | 35.0% | |
| TGTGTAGAAGAATCAGTAGA+GGG | + | chr1_4:64475401-64475420 | Msa0177480:CDS | 35.0% | |
| TCGCAGTTTATGAGAAAGAA+AGG | + | chr1_4:64475668-64475687 | Msa0177480:CDS | 35.0% | |
| GTAAAAGTTCCAAGTCACAA+AGG | + | chr1_4:64475705-64475724 | Msa0177480:CDS | 35.0% | |
| ! | ACAAAGGGCACATAATTTGA+AGG | + | chr1_4:64475721-64475740 | Msa0177480:CDS | 35.0% |
| ! | ACAAAGGGCACATAATTTGA+AGG | + | chr1_4:64475721-64475740 | Msa0177480:CDS | 35.0% |
| CTTTCAGCTGAATAGATGAT+GGG | - | chr1_4:64475860-64475879 | None:intergenic | 35.0% | |
| TCTTTCAGCTGAATAGATGA+TGG | - | chr1_4:64475861-64475880 | None:intergenic | 35.0% | |
| CTTTCAGCTGAATAGATGAT+GGG | - | chr1_4:64475860-64475879 | None:intergenic | 35.0% | |
| TCTTTCAGCTGAATAGATGA+TGG | - | chr1_4:64475861-64475880 | None:intergenic | 35.0% | |
| ! | ATCCATTCTAGTGCTTCTTT+TGG | - | chr1_4:64476040-64476059 | None:intergenic | 35.0% |
| GGAATTAAGAAAGAAGAGAG+TGG | + | chr1_4:64476096-64476115 | Msa0177480:CDS | 35.0% | |
| TAAGAAAGAAGAGAGTGGAA+CGG | + | chr1_4:64476101-64476120 | Msa0177480:CDS | 35.0% | |
| ! | ATGGATTTTGCAGCTGAAAA+AGG | - | chr1_4:64476196-64476215 | None:intergenic | 35.0% |
| TGAAATATGTCCACAATTGC+TGG | - | chr1_4:64476239-64476258 | None:intergenic | 35.0% | |
| CACTTCTTCTCTTCTGAATA+AGG | + | chr1_4:64476424-64476443 | Msa0177480:CDS | 35.0% | |
| TCTGAATAAGGAGTCAAGAA+AGG | + | chr1_4:64476436-64476455 | Msa0177480:CDS | 35.0% | |
| CGTTTAATCATTCCACAATC+AGG | + | chr1_4:64476491-64476510 | Msa0177480:CDS | 35.0% | |
| !! | GAATGGATTGAAGAATGCAT+AGG | + | chr1_4:64476688-64476707 | Msa0177480:CDS | 35.0% |
| GATTCATATCCAAAGCTCAA+TGG | + | chr1_4:64476726-64476745 | Msa0177480:CDS | 35.0% | |
| AGTTGACATCATCACTAAGA+AGG | - | chr1_4:64476858-64476877 | None:intergenic | 35.0% | |
| GAAAATCAAATCCATGGCAA+AGG | + | chr1_4:64476879-64476898 | Msa0177480:CDS | 35.0% | |
| GTAATGAAATACCTTTGCCA+TGG | - | chr1_4:64476893-64476912 | None:intergenic | 35.0% | |
| GTATTTCATTACCCTCTCAT+GGG | + | chr1_4:64476901-64476920 | Msa0177480:intron | 35.0% | |
| CGGTCAAAATAAAATGCAGT+CGG | + | chr1_4:64476982-64477001 | Msa0177480:intron | 35.0% | |
| ACATAAACCTCTCAGAGAAA+GGG | - | chr1_4:64477187-64477206 | None:intergenic | 35.0% | |
| ! | TTTCTCTGAGAGGTTTATGT+GGG | + | chr1_4:64477187-64477206 | Msa0177480:CDS | 35.0% |
| CAGGGATGTTAAAACTTGAA+AGG | - | chr1_4:64477407-64477426 | None:intergenic | 35.0% | |
| TCTTCAGCTTCTTCTTCCAA+TGG | + | chr1_4:64472684-64472703 | Msa0177480:exon | 40.0% | |
| GAAACGACAATTGAAGCCAT+TGG | - | chr1_4:64472703-64472722 | None:intergenic | 40.0% | |
| GATGGAAACGACTAATGCTA+GGG | - | chr1_4:64472900-64472919 | None:intergenic | 40.0% | |
| AGATGGAAACGACTAATGCT+AGG | - | chr1_4:64472901-64472920 | None:intergenic | 40.0% | |
| AAGGTGATAGCTTTCAGCTT+GGG | + | chr1_4:64473153-64473172 | Msa0177480:CDS | 40.0% | |
| CGATGATGTGGATGCATTAA+AGG | + | chr1_4:64473217-64473236 | Msa0177480:CDS | 40.0% | |
| TACAAGTTTGAGGAGGAAAG+TGG | + | chr1_4:64473622-64473641 | Msa0177480:intron | 40.0% | |
| ! | AGGTTGTGATGATGAAAGGA+AGG | + | chr1_4:64473783-64473802 | Msa0177480:CDS | 40.0% |
| TCATCAACTGATTGCGTGTA+AGG | - | chr1_4:64473922-64473941 | None:intergenic | 40.0% | |
| TGAAGCTGATAACATGCAGA+TGG | + | chr1_4:64473939-64473958 | Msa0177480:CDS | 40.0% | |
| GAAGCTGATAACATGCAGAT+GGG | + | chr1_4:64473940-64473959 | Msa0177480:CDS | 40.0% | |
| ATTGCACCAACAATCTTCTG+CGG | + | chr1_4:64474077-64474096 | Msa0177480:CDS | 40.0% | |
| TTGATCCTGAATCATCCTTC+GGG | + | chr1_4:64474112-64474131 | Msa0177480:CDS | 40.0% | |
| TCATCAAACCAATACTGACG+AGG | + | chr1_4:64474257-64474276 | Msa0177480:CDS | 40.0% | |
| AGAAACTTCCTCGTCAGTAT+TGG | - | chr1_4:64474268-64474287 | None:intergenic | 40.0% | |
| TCTGTGGATTCACTATCTGA+TGG | + | chr1_4:64474285-64474304 | Msa0177480:CDS | 40.0% | |
| GGAGAAAAAGAAGGTAGTTG+CGG | + | chr1_4:64474306-64474325 | Msa0177480:CDS | 40.0% | |
| TCACAAGCAACAGTATTCAC+TGG | + | chr1_4:64474374-64474393 | Msa0177480:CDS | 40.0% | |
| ! | CCATTTTCTTCAGAAGATGC+AGG | - | chr1_4:64474447-64474466 | None:intergenic | 40.0% |
| ! | CCTGCATCTTCTGAAGAAAA+TGG | + | chr1_4:64474444-64474463 | Msa0177480:CDS | 40.0% |
| TAAATGTGACGTGGAGTTCA+AGG | + | chr1_4:64474692-64474711 | Msa0177480:CDS | 40.0% | |
| GAGTTACCTTCTTCATCACA+AGG | - | chr1_4:64474735-64474754 | None:intergenic | 40.0% | |
| TGATGAAGAAGGTAACTCAC+TGG | + | chr1_4:64474737-64474756 | Msa0177480:CDS | 40.0% | |
| TGAATGTGATGAGGAGTTCA+AGG | + | chr1_4:64474932-64474951 | Msa0177480:CDS | 40.0% | |
| CATCACAAGGTTTGACATAG+AGG | - | chr1_4:64474962-64474981 | None:intergenic | 40.0% | |
| GTCAAACCTTGTGATGAAGA+AGG | + | chr1_4:64474966-64474985 | Msa0177480:CDS | 40.0% | |
| GAGTCACTTAATCCTTCATC+CGG | + | chr1_4:64475038-64475057 | Msa0177480:CDS | 40.0% | |
| TGAATGTGATGAGGAGTTCA+AGG | + | chr1_4:64474932-64474951 | Msa0177480:CDS | 40.0% | |
| CATCACAAGGTTTGACATAG+AGG | - | chr1_4:64474962-64474981 | None:intergenic | 40.0% | |
| GTCAAACCTTGTGATGAAGA+AGG | + | chr1_4:64474966-64474985 | Msa0177480:CDS | 40.0% | |
| GAGTTACCTTCTTCATCACA+AGG | - | chr1_4:64474735-64474754 | None:intergenic | 40.0% | |
| ACTTAATCCTTCAGTGACTC+AGG | + | chr1_4:64475283-64475302 | Msa0177480:CDS | 40.0% | |
| AGTGACTCAGGAAACTGATA+TGG | + | chr1_4:64475295-64475314 | Msa0177480:CDS | 40.0% | |
| CTGTGTAGAAGAATCAGTAG+AGG | + | chr1_4:64475400-64475419 | Msa0177480:CDS | 40.0% | |
| ! | GGGCTTGAGTTTTCCTTATT+TGG | - | chr1_4:64475632-64475651 | None:intergenic | 40.0% |
| TCTCATAAACTGCGAGTGAA+AGG | - | chr1_4:64475663-64475682 | None:intergenic | 40.0% | |
| ATTATGTGCCCTTTGTGACT+TGG | - | chr1_4:64475717-64475736 | None:intergenic | 40.0% | |
| TTATGTGCCCTTTGTGACTT+CGG | - | chr1_4:64475716-64475735 | None:intergenic | 40.0% | |
| TTCCATTCATGTGCTTCTCT+TGG | - | chr1_4:64475920-64475939 | None:intergenic | 40.0% | |
| !! | CTCCAAAAGAAGCACTAGAA+TGG | + | chr1_4:64476035-64476054 | Msa0177480:CDS | 40.0% |
| ATAGTATTGCGACACTCAAG+AGG | - | chr1_4:64476076-64476095 | None:intergenic | 40.0% | |
| ! | TCTTGAGTGTCGCAATACTA+TGG | + | chr1_4:64476075-64476094 | Msa0177480:CDS | 40.0% |
| ! | CAATCACTAATCAGTTCTGG+AGG | + | chr1_4:64476133-64476152 | Msa0177480:CDS | 40.0% |
| TCAGCTGCAAAATCCATTCT+TGG | + | chr1_4:64476199-64476218 | Msa0177480:CDS | 40.0% | |
| GTGATATCTTACAGATGGCT+GGG | - | chr1_4:64476272-64476291 | None:intergenic | 40.0% | |
| TGTGATATCTTACAGATGGC+TGG | - | chr1_4:64476273-64476292 | None:intergenic | 40.0% | |
| GTATTAGTGCAGAACGAAAG+AGG | + | chr1_4:64476381-64476400 | Msa0177480:CDS | 40.0% | |
| ! | GGAAGCATGAAGCAACAAAT+TGG | + | chr1_4:64476628-64476647 | Msa0177480:CDS | 40.0% |
| GCATTCTTCAATCCATTCCA+AGG | - | chr1_4:64476686-64476705 | None:intergenic | 40.0% | |
| AATGCATAGGGAAGACAAAG+TGG | + | chr1_4:64476701-64476720 | Msa0177480:CDS | 40.0% | |
| TCATATCCAAAGCTCAATGG+AGG | + | chr1_4:64476729-64476748 | Msa0177480:CDS | 40.0% | |
| ATTCATCCTCCATTGAGCTT+TGG | - | chr1_4:64476738-64476757 | None:intergenic | 40.0% | |
| GGTATTTCATTACCCTCTCA+TGG | + | chr1_4:64476900-64476919 | Msa0177480:intron | 40.0% | |
| TCTCAATCCATAGCAAACCT+CGG | + | chr1_4:64476942-64476961 | Msa0177480:intron | 40.0% | |
| TGGCTGTTGGATTAATCTAG+CGG | - | chr1_4:64477029-64477048 | None:intergenic | 40.0% | |
| ATTAATCCAACAGCCAAAGC+TGG | + | chr1_4:64477033-64477052 | Msa0177480:intron | 40.0% | |
| TTAATCCAACAGCCAAAGCT+GGG | + | chr1_4:64477034-64477053 | Msa0177480:intron | 40.0% | |
| GGGTTGCAAAGAATCAAAGT+TGG | + | chr1_4:64477059-64477078 | Msa0177480:intron | 40.0% | |
| CACATAAACCTCTCAGAGAA+AGG | - | chr1_4:64477188-64477207 | None:intergenic | 40.0% | |
| ! | CTTTCTCTGAGAGGTTTATG+TGG | + | chr1_4:64477186-64477205 | Msa0177480:CDS | 40.0% |
| CCCTTAAAACCACATCATCT+CGG | - | chr1_4:64477247-64477266 | None:intergenic | 40.0% | |
| !!! | CCGAGATGATGTGGTTTTAA+GGG | + | chr1_4:64477244-64477263 | Msa0177480:CDS | 40.0% |
| !! | ATATTGCTGTTTGCCATCCA+AGG | + | chr1_4:64477271-64477290 | Msa0177480:CDS | 40.0% |
| GATGATCAAATCCTCCTCGT+TGG | + | chr1_4:64472841-64472860 | Msa0177480:CDS | 45.0% | |
| GACTAATGCTAGGGTGAAAG+AGG | - | chr1_4:64472891-64472910 | None:intergenic | 45.0% | |
| AGAGAAACAGAGCGAGAAGA+AGG | - | chr1_4:64472940-64472959 | None:intergenic | 45.0% | |
| ATTGTGTGTGGTACAGTGCA+TGG | + | chr1_4:64473077-64473096 | Msa0177480:intron | 45.0% | |
| TGGTACAGTGCATGGAACAT+GGG | + | chr1_4:64473085-64473104 | Msa0177480:intron | 45.0% | |
| TGTGGTAGAAAGCTTGAGCA+TGG | + | chr1_4:64473110-64473129 | Msa0177480:CDS | 45.0% | |
| !! | TGGTGTGAGCGTTGATTTGA+AGG | + | chr1_4:64473130-64473149 | Msa0177480:CDS | 45.0% |
| !! | GTGAGCGTTGATTTGAAGGA+AGG | + | chr1_4:64473134-64473153 | Msa0177480:CDS | 45.0% |
| GAAGGTGATAGCTTTCAGCT+TGG | + | chr1_4:64473152-64473171 | Msa0177480:CDS | 45.0% | |
| TTCAGCTTGGGAGTTCAAGT+AGG | + | chr1_4:64473165-64473184 | Msa0177480:CDS | 45.0% | |
| TCAGCTTGGGAGTTCAAGTA+GGG | + | chr1_4:64473166-64473185 | Msa0177480:CDS | 45.0% | |
| GTTTGAGGAGGAAAGTGGTT+TGG | + | chr1_4:64473627-64473646 | Msa0177480:intron | 45.0% | |
| TCAACTGATTGCGTGTAAGG+TGG | - | chr1_4:64473919-64473938 | None:intergenic | 45.0% | |
| ! | GCTTTTCCGCAGAAGATTGT+TGG | - | chr1_4:64474086-64474105 | None:intergenic | 45.0% |
| TGATCCTGAATCATCCTTCG+GGG | + | chr1_4:64474113-64474132 | Msa0177480:CDS | 45.0% | |
| ! | TTTTCCCCGAAGGATGATTC+AGG | - | chr1_4:64474120-64474139 | None:intergenic | 45.0% |
| GAATCATCCTTCGGGGAAAA+AGG | + | chr1_4:64474120-64474139 | Msa0177480:CDS | 45.0% | |
| TACTGACGAGGAAGTTTCTG+TGG | + | chr1_4:64474269-64474288 | Msa0177480:CDS | 45.0% | |
| !! | TGCTGCTGCTGATTCGTTAT+CGG | + | chr1_4:64474653-64474672 | Msa0177480:CDS | 45.0% |
| GAAGATGTGTTTCCGGATGA+AGG | - | chr1_4:64475053-64475072 | None:intergenic | 45.0% | |
| TCAGTTTCCTGAGTCACTGA+AGG | - | chr1_4:64475293-64475312 | None:intergenic | 45.0% | |
| CACAGCAACAAGAGATTGCA+GGG | - | chr1_4:64475348-64475367 | None:intergenic | 45.0% | |
| !! | TGCGAGTGAAAGGTGTTTGT+GGG | - | chr1_4:64475653-64475672 | None:intergenic | 45.0% |
| ! | CTCCAAGAGAAGCACATGAA+TGG | + | chr1_4:64475915-64475934 | Msa0177480:CDS | 45.0% |
| !!! | CTAGTGCTTCTTTTGGAGTC+AGG | - | chr1_4:64476033-64476052 | None:intergenic | 45.0% |
| ! | GAAGCACTAGAATGGATGTC+AGG | + | chr1_4:64476043-64476062 | Msa0177480:CDS | 45.0% |
| TCTGACAGTGACACCAAGAA+TGG | - | chr1_4:64476215-64476234 | None:intergenic | 45.0% | |
| ACTGTCAGATCCAGCAATTG+TGG | + | chr1_4:64476226-64476245 | Msa0177480:CDS | 45.0% | |
| AAGGCTTTGCAGCTTCTACA+AGG | + | chr1_4:64476455-64476474 | Msa0177480:CDS | 45.0% | |
| AGCTTCTACAAGGTCTCAAG+AGG | + | chr1_4:64476465-64476484 | Msa0177480:CDS | 45.0% | |
| AAGGATTTCAGAGGCTGCTT+TGG | + | chr1_4:64476660-64476679 | Msa0177480:CDS | 45.0% | |
| GCTCAATGGAGGATGAATTC+AGG | + | chr1_4:64476740-64476759 | Msa0177480:CDS | 45.0% | |
| !! | GAGGTTTGCTATGGATTGAG+AGG | - | chr1_4:64476943-64476962 | None:intergenic | 45.0% |
| CTAGATTAATCCAAACGCCG+AGG | - | chr1_4:64476962-64476981 | None:intergenic | 45.0% | |
| CGGCGTTTGGATTAATCTAG+CGG | + | chr1_4:64476962-64476981 | Msa0177480:intron | 45.0% | |
| GGCCGCTAATAAAATGCAGT+CGG | + | chr1_4:64477003-64477022 | Msa0177480:intron | 45.0% | |
| ! | GGCCGACTGCATTTTATTAG+CGG | - | chr1_4:64477008-64477027 | None:intergenic | 45.0% |
| TAGTGAACCCTTTCTCTGAG+AGG | + | chr1_4:64477177-64477196 | Msa0177480:CDS | 45.0% | |
| !! | GCCGAGATGATGTGGTTTTA+AGG | + | chr1_4:64477243-64477262 | Msa0177480:CDS | 45.0% |
| !! | ATATAAAATTGAAATAAAAA+TGG | - | chr1_4:64473245-64473264 | None:intergenic | 5.0% |
| !! | AATTTGGGTGTCGACCAACG+AGG | - | chr1_4:64472858-64472877 | None:intergenic | 50.0% |
| GTGGTACAGTGCATGGAACA+TGG | + | chr1_4:64473084-64473103 | Msa0177480:intron | 50.0% | |
| ! | GGCTTTGGCCTACAGAACAT+TGG | + | chr1_4:64473754-64473773 | Msa0177480:intron | 50.0% |
| ! | GTTGGTGCAATTTGGAGCCT+TGG | - | chr1_4:64474068-64474087 | None:intergenic | 50.0% |
| GAGCTGCCTTCTTCATCACA+AGG | - | chr1_4:64474975-64474994 | None:intergenic | 50.0% | |
| TGATGAAGAAGGCAGCTCAC+TGG | + | chr1_4:64474977-64474996 | Msa0177480:CDS | 50.0% | |
| CCACAGCAACAAGAGATTGC+AGG | - | chr1_4:64475349-64475368 | None:intergenic | 50.0% | |
| CCTGCAATCTCTTGTTGCTG+TGG | + | chr1_4:64475346-64475365 | Msa0177480:CDS | 50.0% | |
| CAATCTCTTGTTGCTGTGGC+TGG | + | chr1_4:64475350-64475369 | Msa0177480:CDS | 50.0% | |
| GTAGAGGGAAGCTTAACCCT+TGG | + | chr1_4:64475416-64475435 | Msa0177480:CDS | 50.0% | |
| CTCTTCCAAGTTCGATCCTG+AGG | - | chr1_4:64475482-64475501 | None:intergenic | 50.0% | |
| !! | GCGAGTGAAAGGTGTTTGTG+GGG | - | chr1_4:64475652-64475671 | None:intergenic | 50.0% |
| !! | CTGCGAGTGAAAGGTGTTTG+TGG | - | chr1_4:64475654-64475673 | None:intergenic | 50.0% |
| ACCAGACTCCGAAGTCACAA+AGG | + | chr1_4:64475807-64475826 | Msa0177480:CDS | 50.0% | |
| CCAGACTCCGAAGTCACAAA+GGG | + | chr1_4:64475808-64475827 | Msa0177480:CDS | 50.0% | |
| CATGTGCTTCTCTTGGAGTC+AGG | - | chr1_4:64475913-64475932 | None:intergenic | 50.0% | |
| TGCAGAACGAAAGAGGAGCT+GGG | + | chr1_4:64476388-64476407 | Msa0177480:CDS | 50.0% | |
| GCATAGGGAAGACAAAGTGG+TGG | + | chr1_4:64476704-64476723 | Msa0177480:CDS | 50.0% | |
| !! | TTGGTCTTGCCGAGATGATG+TGG | + | chr1_4:64477235-64477254 | Msa0177480:CDS | 50.0% |
| !! | TTGCTGTTTGCCATCCAAGG+CGG | + | chr1_4:64477274-64477293 | Msa0177480:CDS | 50.0% |
| GTGCATGGAACATGGGTGTG+TGG | + | chr1_4:64473092-64473111 | Msa0177480:intron | 55.0% | |
| TTGTCCCGAAGTGGAGATGC+CGG | + | chr1_4:64473969-64473988 | Msa0177480:CDS | 55.0% | |
| TCCTTCGGGGAAAAAGGCGA+CGG | + | chr1_4:64474126-64474145 | Msa0177480:CDS | 55.0% | |
| GTGCACCTCAGGATCGAACT+TGG | + | chr1_4:64475474-64475493 | Msa0177480:CDS | 55.0% | |
| CCCTTTGTGACTTCGGAGTC+TGG | - | chr1_4:64475811-64475830 | None:intergenic | 55.0% | |
| GTGCAGAACGAAAGAGGAGC+TGG | + | chr1_4:64476387-64476406 | Msa0177480:CDS | 55.0% | |
| ACGAAAGAGGAGCTGGGACT+TGG | + | chr1_4:64476394-64476413 | Msa0177480:CDS | 55.0% | |
| ! | TTCAGAGGCTGCTTTGGCCT+TGG | + | chr1_4:64476666-64476685 | Msa0177480:CDS | 55.0% |
| !! | AGGCTGCTTTGGCCTTGGAA+TGG | + | chr1_4:64476671-64476690 | Msa0177480:CDS | 55.0% |
| !! | CCAAACGCCGAGGTTTGCTA+TGG | - | chr1_4:64476952-64476971 | None:intergenic | 55.0% |
| CCATAGCAAACCTCGGCGTT+TGG | + | chr1_4:64476949-64476968 | Msa0177480:intron | 55.0% | |
| ATCCAACAGCCAAAGCTGGG+AGG | + | chr1_4:64477037-64477056 | Msa0177480:intron | 55.0% | |
| TCCAACAGCCAAAGCTGGGA+GGG | + | chr1_4:64477038-64477057 | Msa0177480:intron | 55.0% | |
| TTTGCAACCCCTCCCAGCTT+TGG | - | chr1_4:64477049-64477068 | None:intergenic | 55.0% | |
| CAAGACCAAGTCAGTCCTCG+AGG | - | chr1_4:64477224-64477243 | None:intergenic | 55.0% | |
| ! | TGCTGTTTGCCATCCAAGGC+GGG | + | chr1_4:64477275-64477294 | Msa0177480:CDS | 55.0% |
| AGCTTCAAACCCGCCTTGGA+TGG | - | chr1_4:64477287-64477306 | None:intergenic | 55.0% | |
| AAGCAGCTTCAAACCCGCCT+TGG | - | chr1_4:64477291-64477310 | None:intergenic | 55.0% | |
| !! | TTGGGTGTCGACCAACGAGG+AGG | - | chr1_4:64472855-64472874 | None:intergenic | 60.0% |
| GGGTGAAGCTTGTCCCGAAG+TGG | + | chr1_4:64473960-64473979 | Msa0177480:CDS | 60.0% | |
| TGTCCCGAAGTGGAGATGCC+GGG | + | chr1_4:64473970-64473989 | Msa0177480:CDS | 60.0% | |
| TCTCCCGGCATCTCCACTTC+GGG | - | chr1_4:64473976-64473995 | None:intergenic | 60.0% | |
| CTCTCCCGGCATCTCCACTT+CGG | - | chr1_4:64473977-64473996 | None:intergenic | 60.0% | |
| CCTTGGACTGCTTCCGCAAC+TGG | - | chr1_4:64474051-64474070 | None:intergenic | 60.0% | |
| CCAGTTGCGGAAGCAGTCCA+AGG | + | chr1_4:64474048-64474067 | Msa0177480:CDS | 60.0% | |
| ! | ACCGTCGCCTTTTTCCCCGA+AGG | - | chr1_4:64474130-64474149 | None:intergenic | 60.0% |
| ! | GGAAAAAGGCGACGGTGCTG+TGG | + | chr1_4:64474134-64474153 | Msa0177480:CDS | 60.0% |
| TAAGGCTGCGAGTGCACCTC+AGG | + | chr1_4:64475463-64475482 | Msa0177480:CDS | 60.0% | |
| CCAACAGCCAAAGCTGGGAG+GGG | + | chr1_4:64477039-64477058 | Msa0177480:intron | 60.0% | |
| TGGGCTAACAGCTCTCCTCG+AGG | + | chr1_4:64477206-64477225 | Msa0177480:CDS | 60.0% | |
| GCTCTCCTCGAGGACTGACT+TGG | + | chr1_4:64477216-64477235 | Msa0177480:CDS | 60.0% | |
| ! | CCCCTCCCAGCTTTGGCTGT+TGG | - | chr1_4:64477042-64477061 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 64472646 | 64477490 | 64472646 | ID=Msa0177480;Name=Msa0177480 |
| chr1_4 | mRNA | 64472646 | 64477490 | 64472646 | ID=Msa0177480-mRNA-1;Parent=Msa0177480;Name=Msa0177480-mRNA-1;_AED=0.00;_eAED=0.00;_QI=57|1|0.83|1|1|1|6|171|1177 |
| chr1_4 | exon | 64472646 | 64472976 | 64472646 | ID=Msa0177480-mRNA-1:exon:20928;Parent=Msa0177480-mRNA-1 |
| chr1_4 | exon | 64473093 | 64473238 | 64473093 | ID=Msa0177480-mRNA-1:exon:20929;Parent=Msa0177480-mRNA-1 |
| chr1_4 | exon | 64473769 | 64476279 | 64473769 | ID=Msa0177480-mRNA-1:exon:20930;Parent=Msa0177480-mRNA-1 |
| chr1_4 | exon | 64476380 | 64476512 | 64476380 | ID=Msa0177480-mRNA-1:exon:20931;Parent=Msa0177480-mRNA-1 |
| chr1_4 | exon | 64476614 | 64476900 | 64476614 | ID=Msa0177480-mRNA-1:exon:20932;Parent=Msa0177480-mRNA-1 |
| chr1_4 | exon | 64477137 | 64477490 | 64477137 | ID=Msa0177480-mRNA-1:exon:20933;Parent=Msa0177480-mRNA-1 |
| chr1_4 | five_prime_UTR | 64472646 | 64472702 | 64472646 | ID=Msa0177480-mRNA-1:five_prime_utr;Parent=Msa0177480-mRNA-1 |
| chr1_4 | CDS | 64472703 | 64472976 | 64472703 | ID=Msa0177480-mRNA-1:cds;Parent=Msa0177480-mRNA-1 |
| chr1_4 | CDS | 64473093 | 64473238 | 64473093 | ID=Msa0177480-mRNA-1:cds;Parent=Msa0177480-mRNA-1 |
| chr1_4 | CDS | 64473769 | 64476279 | 64473769 | ID=Msa0177480-mRNA-1:cds;Parent=Msa0177480-mRNA-1 |
| chr1_4 | CDS | 64476380 | 64476512 | 64476380 | ID=Msa0177480-mRNA-1:cds;Parent=Msa0177480-mRNA-1 |
| chr1_4 | CDS | 64476614 | 64476900 | 64476614 | ID=Msa0177480-mRNA-1:cds;Parent=Msa0177480-mRNA-1 |
| chr1_4 | CDS | 64477137 | 64477319 | 64477137 | ID=Msa0177480-mRNA-1:cds;Parent=Msa0177480-mRNA-1 |
| chr1_4 | three_prime_UTR | 64477320 | 64477490 | 64477320 | ID=Msa0177480-mRNA-1:three_prime_utr;Parent=Msa0177480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
