AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0178670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178670 MtrunA17_Chr1g0208381 99.496 397 2 0 1 397 1 397 0.0 822
Msa0178670 MtrunA17_Chr6g0452631 45.985 411 203 2 4 396 23 432 3.46e-133 389
Msa0178670 MtrunA17_Chr4g0010141 50.286 350 173 1 48 397 71 419 3.80e-131 383
Msa0178670 MtrunA17_Chr4g0022501 51.289 349 167 2 48 396 87 432 4.19e-129 378
Msa0178670 MtrunA17_Chr2g0317441 44.235 425 202 5 1 397 7 424 6.20e-119 352
Msa0178670 MtrunA17_Chr1g0169461 47.863 351 177 4 47 396 93 438 4.37e-116 345
Msa0178670 MtrunA17_Chr6g0460801 45.251 358 185 4 46 397 52 404 2.82e-109 327
Msa0178670 MtrunA17_Chr7g0254121 42.579 411 203 6 5 397 4 399 8.24e-107 320
Msa0178670 MtrunA17_Chr4g0063621 45.429 350 156 3 48 396 73 388 5.79e-103 310
Msa0178670 MtrunA17_Chr4g0002191 43.836 365 200 4 35 397 46 407 5.20e-97 295
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178670 AT1G71070.1 70.277 397 116 2 1 397 1 395 0.0 581
Msa0178670 AT5G39990.1 49.735 378 188 2 20 397 72 447 4.68e-130 381
Msa0178670 AT4G27480.2 44.917 423 200 5 2 397 5 421 1.16e-127 374
Msa0178670 AT4G27480.3 44.917 423 200 5 2 397 5 421 1.16e-127 374
Msa0178670 AT4G27480.1 44.917 423 200 5 2 397 5 421 1.16e-127 374
Msa0178670 AT3G15350.2 44.131 426 204 6 1 397 4 424 7.46e-124 365
Msa0178670 AT3G15350.1 44.131 426 204 6 1 397 4 424 7.46e-124 365
Msa0178670 AT1G03520.1 44.226 407 201 4 3 385 32 436 1.71e-123 365
Msa0178670 AT4G03340.1 44.498 418 204 4 4 396 33 447 9.60e-123 363
Msa0178670 AT5G15050.1 45.324 417 204 3 4 397 19 434 1.18e-122 362
Msa0178670 AT1G03520.2 49.558 339 169 1 47 385 11 347 3.32e-122 358
Msa0178670 AT1G53100.1 43.415 410 207 4 4 396 21 422 3.59e-116 345
Msa0178670 AT1G53100.2 43.970 398 198 4 4 384 21 410 1.34e-113 338
Msa0178670 AT4G03340.2 42.584 418 189 5 4 396 33 424 3.52e-111 332
Msa0178670 AT3G24040.1 47.293 351 182 3 47 396 66 414 3.31e-110 330
Msa0178670 AT3G03690.1 48.949 333 160 4 22 346 23 353 9.30e-108 322
Msa0178670 AT2G37585.1 46.286 350 166 3 48 397 57 384 1.60e-104 314
Msa0178670 AT3G03690.2 46.626 163 81 3 28 186 29 189 8.63e-41 144

Find 151 sgRNAs with CRISPR-Local

Find 666 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATTGAGCCGACCCTTTC+TGG 0.089306 1_4:-65986942 Msa0178670:CDS
ACAATTCTGGTGCAAAATTT+TGG 0.121049 1_4:-65993685 Msa0178670:five_prime_UTR
GGCTGATTGGATCACTTATT+TGG 0.148700 1_4:-65993117 Msa0178670:CDS
TTTGAAACTATTTGCGTTAA+TGG 0.174285 1_4:+65993552 None:intergenic
CTTGGGGTGCTGTATTATTT+TGG 0.177742 1_4:-65986228 Msa0178670:three_prime_UTR
GTTCCGGCGATTCGGGCTTT+TGG 0.200421 1_4:-65993161 Msa0178670:CDS
CACTGTTGTGTTCTTAAATT+CGG 0.206760 1_4:+65986811 None:intergenic
TGCTGCTATTATGCTTAAAT+TGG 0.269491 1_4:-65993063 Msa0178670:CDS
GTGACTTACGATACATGATA+TGG 0.304470 1_4:-65986784 Msa0178670:CDS
TTTGGGTTAGATTGGTTGTT+GGG 0.307169 1_4:+65993794 None:intergenic
TATCATAAACAGATGTATTA+AGG 0.314288 1_4:+65986732 None:intergenic
TAGTTCTGTTCCGGCGATTC+GGG 0.329890 1_4:-65993168 Msa0178670:CDS
TACTAAGAATCAAACAATTC+TGG 0.332293 1_4:-65993698 Msa0178670:five_prime_UTR
CCGGATCTTTCGTTTGTTGT+TGG 0.334358 1_4:-65993276 Msa0178670:CDS
AAGTGGGTTTGGTTAAAGTT+TGG 0.336576 1_4:+65993527 None:intergenic
GGTGCTCCGGTCGGAGGAGC+TGG 0.338394 1_4:-65986589 Msa0178670:CDS
CTCCTTGCTAAATATGTTCC+TGG 0.348702 1_4:+65987129 None:intergenic
TTGAAACTATTTGCGTTAAT+GGG 0.349369 1_4:+65993553 None:intergenic
GAGGTTTGTTAAAGAGGTCT+AGG 0.350070 1_4:+65993764 None:intergenic
TTAGTTCTGTTCCGGCGATT+CGG 0.352834 1_4:-65993169 Msa0178670:CDS
ACTTGATTCAAAGGCATCAT+TGG 0.360660 1_4:+65986180 None:intergenic
TAATGGGTCGTTGAAGATCT+TGG 0.369877 1_4:+65993569 None:intergenic
GCTGATTGGATCACTTATTT+GGG 0.376046 1_4:-65993116 Msa0178670:CDS
AATTGGATAGTGGATGGAAT+TGG 0.377417 1_4:-65993046 Msa0178670:CDS
TTACAGAAGAAGATGGAGAT+TGG 0.385821 1_4:+65993821 None:intergenic
GGTGGATCCGTGCTCACAGT+GGG 0.387141 1_4:-65986564 Msa0178670:CDS
TTTCTAGCCTTCTTGATGAC+TGG 0.393670 1_4:-65986487 Msa0178670:CDS
CCACGTAGTGAAATCAGTTA+TGG 0.401503 1_4:-65993480 Msa0178670:exon
AACCGTTATTTGCTTCATCT+TGG 0.403853 1_4:-65993236 Msa0178670:CDS
GAAAGTGAGGTTTGTTAAAG+AGG 0.407851 1_4:+65993758 None:intergenic
GCCAAAAGGAAAAGATTGAT+TGG 0.411773 1_4:+65986022 None:intergenic
AGGAAGAGAGGTTCCATCTT+CGG 0.416614 1_4:+65986752 None:intergenic
TGATGCCGTTAGTTCTGTTC+CGG 0.420966 1_4:-65993177 Msa0178670:CDS
GCACCAGGGGCATGGTGCTC+CGG 0.424727 1_4:-65986602 Msa0178670:CDS
GTTCCTGGATCAACTACAAT+AGG 0.433364 1_4:+65987144 None:intergenic
GGTCGCAACCGAGCTGCACC+AGG 0.434471 1_4:-65986617 Msa0178670:CDS
TACATCTGTTTATGATATGA+TGG 0.435748 1_4:-65986726 Msa0178670:CDS
TTATTTGCTTCATCTTGGTA+TGG 0.441251 1_4:-65993231 Msa0178670:CDS
GCTCCGGTCGGAGGAGCTGG+TGG 0.444083 1_4:-65986586 Msa0178670:CDS
ATGTGGTTGGTAAGGCTGAT+TGG 0.444577 1_4:-65993130 Msa0178670:CDS
TGCTAGGAATGAAGAGAGAC+AGG 0.450149 1_4:-65993207 Msa0178670:CDS
GTGAAGAGTTTGAATGCATC+AGG 0.457700 1_4:+65987069 None:intergenic
CACGTAGTGAAATCAGTTAT+GGG 0.469998 1_4:-65993479 Msa0178670:exon
TTTGCATACTTTATCTCTGG+TGG 0.471087 1_4:-65993314 Msa0178670:CDS
ACCGAGCTGCACCAGGGGCA+TGG 0.472640 1_4:-65986610 Msa0178670:CDS
ATTATGCTTAAATTGGATAG+TGG 0.472769 1_4:-65993056 Msa0178670:CDS
TATTCTTAAGCCAGGTCCTC+AGG 0.473164 1_4:-65986531 Msa0178670:CDS
GATTCTTAGTAATTGAATGT+TGG 0.475652 1_4:+65993710 None:intergenic
ACTGTTGTGTTCTTAAATTC+GGG 0.476266 1_4:+65986812 None:intergenic
AAGCCTATTGTAGTTGATCC+AGG 0.482669 1_4:-65987147 Msa0178670:CDS
AAATAAATGGCAAATTCTAC+TGG 0.482837 1_4:+65986372 None:intergenic
TTTGGGAATGTTGATGTGGT+TGG 0.485305 1_4:-65993143 Msa0178670:CDS
TTTAAGAACACAACAGTGAA+TGG 0.486202 1_4:-65986806 Msa0178670:CDS
CGGTCGGAGGAGCTGGTGGG+TGG 0.486707 1_4:-65986582 Msa0178670:CDS
AGCATTTGCAAGACAGTTCG+AGG 0.489978 1_4:-65986690 Msa0178670:CDS
CAAAAGTTGAGAGTTGGAAT+GGG 0.490180 1_4:-65986275 Msa0178670:three_prime_UTR
AGGTTTGTTAAAGAGGTCTA+GGG 0.490998 1_4:+65993765 None:intergenic
GGAAAAGATTGATTGGAGAA+TGG 0.492471 1_4:+65986029 None:intergenic
CTAAGAATAGAAACCATTGT+AGG 0.492565 1_4:-65986423 Msa0178670:three_prime_UTR
AAATACATTAGTAGCGTTCG+TGG 0.493054 1_4:+65986890 None:intergenic
TTCCCAAAAGCCCGAATCGC+CGG 0.495215 1_4:+65993158 None:intergenic
TGGGTTAGATTGGTTGTTGG+GGG 0.496329 1_4:+65993796 None:intergenic
AAGAAACAAAAGTTGAGAGT+TGG 0.496931 1_4:-65986281 Msa0178670:three_prime_UTR
TTGGGTTAGATTGGTTGTTG+GGG 0.497056 1_4:+65993795 None:intergenic
CGACCGGAGCACCATGCCCC+TGG 0.498967 1_4:+65986599 None:intergenic
TGCTTAAATTGGATAGTGGA+TGG 0.498971 1_4:-65993052 Msa0178670:CDS
TCATGATTGATATTACACTT+TGG 0.499202 1_4:+65986323 None:intergenic
GGGCATGGTGCTCCGGTCGG+AGG 0.500093 1_4:-65986595 Msa0178670:CDS
TATCCTCCCACTTGATTCAA+AGG 0.502341 1_4:+65986171 None:intergenic
TTTCATACTCTTTCCATCCA+AGG 0.504506 1_4:+65987268 None:intergenic
CACCCACCAGCTCCTCCGAC+CGG 0.504628 1_4:+65986583 None:intergenic
TACTTTATCTCTGGTGGACA+TGG 0.505546 1_4:-65993308 Msa0178670:CDS
GAATGTTGATGTGGTTGGTA+AGG 0.506190 1_4:-65993138 Msa0178670:CDS
ACAAAAGTTGAGAGTTGGAA+TGG 0.508077 1_4:-65986276 Msa0178670:three_prime_UTR
TTCATCTTGGTATGGATGCT+AGG 0.515475 1_4:-65993223 Msa0178670:CDS
GAAATTGAGGTCTCTATTCA+CGG 0.518088 1_4:+65987308 None:intergenic
ATGGGACAATCCTCCGAAGA+TGG 0.518158 1_4:-65986765 Msa0178670:CDS
ATTGATCACACTGGTGACCT+TGG 0.518359 1_4:-65987285 Msa0178670:CDS
GAGATAAAGTATGCAAAAGC+AGG 0.520795 1_4:+65993320 None:intergenic
ATCACACTGGTGACCTTGGA+TGG 0.525330 1_4:-65987281 Msa0178670:CDS
GATTGCGCAGCTTCCTACAA+TGG 0.529964 1_4:+65986410 None:intergenic
CAGGGGCATGGTGCTCCGGT+CGG 0.531153 1_4:-65986598 Msa0178670:CDS
CTCATCTGTACGATTCGAGC+AGG 0.531916 1_4:-65986097 Msa0178670:three_prime_UTR
CAGTGTGATCAATGAAATTG+AGG 0.531923 1_4:+65987295 None:intergenic
TGATTCAAAGGCATCATTGG+AGG 0.532887 1_4:+65986183 None:intergenic
CTCCGGTCGGAGGAGCTGGT+GGG 0.534852 1_4:-65986585 Msa0178670:CDS
TTGTCAATCATATCCAGCAC+GGG 0.536748 1_4:+65986659 None:intergenic
TATAACAAACAAGTGCCAAA+AGG 0.540050 1_4:+65986008 None:intergenic
GATGCATTCAAACTCTTCAC+TGG 0.546398 1_4:-65987066 Msa0178670:intron
TACCAAGATGAAGCAAATAA+CGG 0.548707 1_4:+65993234 None:intergenic
GTTGAGAGTTGGAATGGGGA+AGG 0.549437 1_4:-65986270 Msa0178670:three_prime_UTR
ACCATGCCCCTGGTGCAGCT+CGG 0.549540 1_4:+65986609 None:intergenic
TAATATCAATCATGAGAGGT+GGG 0.554273 1_4:-65986315 Msa0178670:three_prime_UTR
TGTTGAACAAGTGATGGAAA+AGG 0.556082 1_4:+65993359 None:intergenic
AATGTTAAGTTATCTCAAGA+AGG 0.558147 1_4:-65986863 Msa0178670:CDS
CGAGGCTAATAACCCCGTGC+TGG 0.558930 1_4:-65986672 Msa0178670:CDS
AAAATGCAGAACTCCAGAAA+GGG 0.561090 1_4:+65986929 None:intergenic
GTGGACATGGTGATAAAGAC+CGG 0.566551 1_4:-65993295 Msa0178670:CDS
AGTGTCTATGATGTGATCAC+TGG 0.566934 1_4:+65986444 None:intergenic
TTTGTCAATCATATCCAGCA+CGG 0.567860 1_4:+65986658 None:intergenic
TGACTTACGATACATGATAT+GGG 0.569521 1_4:-65986783 Msa0178670:CDS
AATGATGCCTTTGAATCAAG+TGG 0.570435 1_4:-65986178 Msa0178670:three_prime_UTR
AAGATGGAGATTGGAGATCA+CGG 0.572549 1_4:+65993830 None:intergenic
AAAGGTAAATTAGGAAAGTG+AGG 0.574143 1_4:+65993745 None:intergenic
ATCCAGGAACATATTTAGCA+AGG 0.575334 1_4:-65987131 Msa0178670:CDS
TGAAGCAAATAACGGTTCCT+CGG 0.576471 1_4:+65993242 None:intergenic
TTTCCATCACTTGTTCAACA+TGG 0.579342 1_4:-65993356 Msa0178670:CDS
GAAAATGCAGAACTCCAGAA+AGG 0.579663 1_4:+65986928 None:intergenic
TGTTGGCTGTTTATCATCCG+AGG 0.580159 1_4:-65993259 Msa0178670:CDS
CCAACAACAAACGAAAGATC+CGG 0.581010 1_4:+65993276 None:intergenic
ACATCACCCCACTGTGAGCA+CGG 0.583640 1_4:+65986557 None:intergenic
GAATGAAGAGAGACAGGGGT+TGG 0.584461 1_4:-65993201 Msa0178670:CDS
TTGAGAGTTGGAATGGGGAA+GGG 0.587800 1_4:-65986269 Msa0178670:three_prime_UTR
GAACCATGTTGAACAAGTGA+TGG 0.589262 1_4:+65993353 None:intergenic
CTCAATTTCATTGATCACAC+TGG 0.590299 1_4:-65987294 Msa0178670:CDS
TCGCAACCGAGCTGCACCAG+GGG 0.595118 1_4:-65986615 Msa0178670:CDS
ATGCCGCTCAGGTTCACCGT+GGG 0.596264 1_4:-65986966 Msa0178670:intron
GATGTCAATATTCTTAAGCC+AGG 0.596661 1_4:-65986539 Msa0178670:CDS
GGGTGGATCCGTGCTCACAG+TGG 0.597115 1_4:-65986565 Msa0178670:CDS
ATAAAGTATGCAAAAGCAGG+AGG 0.597845 1_4:+65993323 None:intergenic
GTAATATCAATCATGAGAGG+TGG 0.603226 1_4:-65986316 Msa0178670:three_prime_UTR
TATCCTCTCATTACACAGGA+TGG 0.606449 1_4:-65992999 Msa0178670:intron
TATGATATGATGGCAGAAAG+TGG 0.609069 1_4:-65986716 Msa0178670:CDS
CAAAATAATACAGCACCCCA+AGG 0.609144 1_4:+65986229 None:intergenic
TTATGAAAGTGAAAAGCAAG+AGG 0.618474 1_4:+65986142 None:intergenic
AAAAGTTGAGAGTTGGAATG+GGG 0.620441 1_4:-65986274 Msa0178670:three_prime_UTR
AAGAGAGGTTCCATCTTCGG+AGG 0.624722 1_4:+65986755 None:intergenic
GTCGCAACCGAGCTGCACCA+GGG 0.627823 1_4:-65986616 Msa0178670:CDS
TGATTATCCTCTCATTACAC+AGG 0.628279 1_4:-65993003 Msa0178670:CDS
ACAGATGTATTAAGGAAGAG+AGG 0.635101 1_4:+65986740 None:intergenic
TGCAGAACTCCAGAAAGGGT+CGG 0.636858 1_4:+65986933 None:intergenic
CATGCCGCTCAGGTTCACCG+TGG 0.638945 1_4:-65986967 Msa0178670:intron
ATGATGCCTTTGAATCAAGT+GGG 0.640825 1_4:-65986177 Msa0178670:three_prime_UTR
ACGTAGCGTAATAGCAACAT+TGG 0.642510 1_4:+65993088 None:intergenic
GTGCGGTCCAGTCATCAAGA+AGG 0.646737 1_4:+65986480 None:intergenic
ATACCATCCTGTGTAATGAG+AGG 0.650846 1_4:+65992996 None:intergenic
AGTGTAATATCAATCATGAG+AGG 0.654897 1_4:-65986319 Msa0178670:three_prime_UTR
GGTCGGCTCAATGTGACCCA+CGG 0.654966 1_4:+65986950 None:intergenic
CTGGCACTGATTCGTCTGTG+CGG 0.656378 1_4:+65986463 None:intergenic
TAAAGTATGCAAAAGCAGGA+GGG 0.657855 1_4:+65993324 None:intergenic
AATATCAATCATGAGAGGTG+GGG 0.659618 1_4:-65986314 Msa0178670:three_prime_UTR
CTCGGTTGCGACCACCACGT+TGG 0.661759 1_4:+65986627 None:intergenic
CATAACTGATTTCACTACGT+GGG 0.665220 1_4:+65993481 None:intergenic
CCATAACTGATTTCACTACG+TGG 0.665557 1_4:+65993480 None:intergenic
GCTAGGAATGAAGAGAGACA+GGG 0.666500 1_4:-65993206 Msa0178670:CDS
AATCGCCGGAACAGAACTAA+CGG 0.673091 1_4:+65993172 None:intergenic
ATGCCTTTGAATCAAGTGGG+AGG 0.683405 1_4:-65986174 Msa0178670:three_prime_UTR
GTGGATCCGTGCTCACAGTG+GGG 0.704097 1_4:-65986563 Msa0178670:CDS
TGTCAATCATATCCAGCACG+GGG 0.714463 1_4:+65986660 None:intergenic
CTAGGAATGAAGAGAGACAG+GGG 0.714775 1_4:-65993205 Msa0178670:CDS
ATTGAGGTCTCTATTCACGG+AGG 0.783848 1_4:+65987311 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTT+TGG - chr1_4:65991468-65991487 Msa0178670:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTTT+GGG - chr1_4:65991469-65991488 Msa0178670:intron 0.0%
!! ACAAAAAAAGTAATATTTCA+AGG + chr1_4:65987578-65987597 None:intergenic 15.0%
!!! GATTTTTTTTCTTTCTAATT+TGG - chr1_4:65987778-65987797 Msa0178670:intron 15.0%
!! AAAACAATAAATTCTTTCAA+TGG + chr1_4:65988198-65988217 None:intergenic 15.0%
!! GTATAATTAGATTAGTATTT+CGG + chr1_4:65988457-65988476 None:intergenic 15.0%
!! ATTTAAAGAGAAAATATAGT+GGG + chr1_4:65988861-65988880 None:intergenic 15.0%
!! AATTTAAAGAGAAAATATAG+TGG + chr1_4:65988862-65988881 None:intergenic 15.0%
!! TTTAAATTGTGAAAACATTA+AGG - chr1_4:65988874-65988893 Msa0178670:intron 15.0%
!! AAATACAAATGATAATTCTA+TGG - chr1_4:65988958-65988977 Msa0178670:intron 15.0%
!! AAATACAAATGATAATTCTA+TGG - chr1_4:65988958-65988977 Msa0178670:intron 15.0%
!! AATAAAAACATAAATAATCC+AGG + chr1_4:65992684-65992703 None:intergenic 15.0%
!!! TGTTTTTCTTTCAAAATAAA+TGG + chr1_4:65993523-65993542 None:intergenic 15.0%
!! AAAACGGTGAATAAAATAAA+AGG + chr1_4:65987349-65987368 None:intergenic 20.0%
!!! ATTTGAAATGCAGTATTAAT+TGG - chr1_4:65987396-65987415 Msa0178670:intron 20.0%
!!! ATTACTTTTTTTGTGATGAA+AGG - chr1_4:65987584-65987603 Msa0178670:intron 20.0%
!! TACTATTATAGTCTAAATCA+TGG + chr1_4:65987840-65987859 None:intergenic 20.0%
!!! TAATAGTATTGAGTTTGTAT+AGG - chr1_4:65987852-65987871 Msa0178670:intron 20.0%
!! TCTTAAAAATATATATTCCG+AGG - chr1_4:65988220-65988239 Msa0178670:intron 20.0%
!! ATGAGATATTCAACTATTTA+AGG + chr1_4:65988337-65988356 None:intergenic 20.0%
!! AATCTTTATTCGACTTTATA+AGG + chr1_4:65988537-65988556 None:intergenic 20.0%
!! TTATCTATAATGTAGATCTT+TGG - chr1_4:65988744-65988763 Msa0178670:intron 20.0%
!! AATGATAATTCTATGGTATT+TGG - chr1_4:65988965-65988984 Msa0178670:intron 20.0%
!! ATGATAATTCTATGGTATTT+GGG - chr1_4:65988966-65988985 Msa0178670:intron 20.0%
!! GAGATTATTGCATAATAATA+AGG - chr1_4:65988988-65989007 Msa0178670:intron 20.0%
!! TATTATAAATAAAGATGCAG+AGG + chr1_4:65989142-65989161 None:intergenic 20.0%
!!! ATTTTTCAATTAGATCAAAC+AGG + chr1_4:65990027-65990046 None:intergenic 20.0%
!!! TCTATGTTTTATGCTATTTT+TGG - chr1_4:65990188-65990207 Msa0178670:intron 20.0%
!!! AAGTTATTTTTTGTTTGGTA+TGG + chr1_4:65990458-65990477 None:intergenic 20.0%
!! ATACCAAACAAAAAATAACT+TGG - chr1_4:65990457-65990476 Msa0178670:intron 20.0%
!! TACCAAACAAAAAATAACTT+GGG - chr1_4:65990458-65990477 Msa0178670:intron 20.0%
!! AATGATAATTCTATGGTATT+TGG - chr1_4:65988965-65988984 Msa0178670:intron 20.0%
!! ATGATAATTCTATGGTATTT+GGG - chr1_4:65988966-65988985 Msa0178670:intron 20.0%
!! GAGATTATTGCATAATAATA+AGG - chr1_4:65988988-65989007 Msa0178670:intron 20.0%
!! TATTATAAATAAAGATGCAG+AGG + chr1_4:65989142-65989161 None:intergenic 20.0%
!! GGAAAAAAATTGTTAGATAT+AGG + chr1_4:65991862-65991881 None:intergenic 20.0%
!!! TGTTTTATAATTTATGTGTG+AGG - chr1_4:65992362-65992381 Msa0178670:intron 20.0%
!! AATAGAAAAAATCATAGTCA+GGG + chr1_4:65992869-65992888 None:intergenic 20.0%
!! AAATAGAAAAAATCATAGTC+AGG + chr1_4:65992870-65992889 None:intergenic 20.0%
!! TATCATAAACAGATGTATTA+AGG + chr1_4:65993150-65993169 None:intergenic 20.0%
!! TTTTTGTGGAAAGGTAAATT+AGG + chr1_4:65986146-65986165 None:intergenic 25.0%
!!! TTGAATGTTGGAATTTTTTG+TGG + chr1_4:65986160-65986179 None:intergenic 25.0%
! GATTCTTAGTAATTGAATGT+TGG + chr1_4:65986172-65986191 None:intergenic 25.0%
! TACTAAGAATCAAACAATTC+TGG - chr1_4:65986181-65986200 Msa0178670:three_prime_UTR 25.0%
!!! AATTTTGGAAATTTCTGATC+TGG - chr1_4:65986209-65986228 Msa0178670:three_prime_UTR 25.0%
!!! ATTTTGGAAATTTCTGATCT+GGG - chr1_4:65986210-65986229 Msa0178670:three_prime_UTR 25.0%
! TTGAAACTATTTGCGTTAAT+GGG + chr1_4:65986329-65986348 None:intergenic 25.0%
!! TTTGAAACTATTTGCGTTAA+TGG + chr1_4:65986330-65986349 None:intergenic 25.0%
!!! AAGTTTAGATTTTGAGAAGT+GGG + chr1_4:65986371-65986390 None:intergenic 25.0%
!!! AAAGTTTAGATTTTGAGAAG+TGG + chr1_4:65986372-65986391 None:intergenic 25.0%
! ATTATGCTTAAATTGGATAG+TGG - chr1_4:65986823-65986842 Msa0178670:CDS 25.0%
! AACATCCACAATCAAATAAA+AGG + chr1_4:65986949-65986968 None:intergenic 25.0%
! AACATCCACAATCAAATAAA+AGG + chr1_4:65986949-65986968 None:intergenic 25.0%
!!! AGTTTTCATCATTTTTCGAT+AGG - chr1_4:65987627-65987646 Msa0178670:intron 25.0%
! AAGTATAAACCTTATACTTC+CGG + chr1_4:65987670-65987689 None:intergenic 25.0%
!! AAAAAAATCAAAGTACCATG+TGG + chr1_4:65987767-65987786 None:intergenic 25.0%
!! TTTCTAATTTGGTCTTTCAA+AGG - chr1_4:65987789-65987808 Msa0178670:intron 25.0%
!! AAAGGAATTTTACAGTTTAC+TGG - chr1_4:65987807-65987826 Msa0178670:intron 25.0%
! AAAGTCAAGAATTAGTTAAG+AGG - chr1_4:65987952-65987971 Msa0178670:intron 25.0%
! AAGTCAAGAATTAGTTAAGA+GGG - chr1_4:65987953-65987972 Msa0178670:intron 25.0%
! CTCATGTAGTTATAATTGTT+AGG - chr1_4:65988352-65988371 Msa0178670:intron 25.0%
! TATCTAACAAAAATCAACAG+AGG + chr1_4:65988921-65988940 None:intergenic 25.0%
!!! TGTTGATTTTTGTTAGATAC+TGG - chr1_4:65988922-65988941 Msa0178670:intron 25.0%
!! ATTTTATAACTTATGCCCTT+AGG - chr1_4:65989251-65989270 Msa0178670:intron 25.0%
! ATGTGAAATACATTAGTTGT+CGG + chr1_4:65989756-65989775 None:intergenic 25.0%
! TAATATTGAGATCTCTTCAA+TGG + chr1_4:65989818-65989837 None:intergenic 25.0%
! ATCTCAATATTAAGAGTAGA+TGG - chr1_4:65989826-65989845 Msa0178670:intron 25.0%
! ATAAAGATGCTATTGATGAA+GGG + chr1_4:65990093-65990112 None:intergenic 25.0%
!! AAACCTTTTCAAACAATCAT+CGG + chr1_4:65990133-65990152 None:intergenic 25.0%
!!! TTTATGCTATTTTTGGAATC+TGG - chr1_4:65990195-65990214 Msa0178670:intron 25.0%
! ACAAAACAATTCTAGTAAGT+GGG + chr1_4:65990256-65990275 None:intergenic 25.0%
! TCAATTTAATGATAGCCATT+GGG + chr1_4:65990391-65990410 None:intergenic 25.0%
! TTCAATTTAATGATAGCCAT+TGG + chr1_4:65990392-65990411 None:intergenic 25.0%
!!! TATTTTTTGTTTGGTATGGA+AGG + chr1_4:65990454-65990473 None:intergenic 25.0%
!! TGGTATCTCTTTTAATCTAA+TGG + chr1_4:65990490-65990509 None:intergenic 25.0%
! ATAAAACTATGAAGAGTCAA+AGG + chr1_4:65991102-65991121 None:intergenic 25.0%
!! ATTTTATAACTTATGCCCTT+AGG - chr1_4:65989251-65989270 Msa0178670:intron 25.0%
! AGAAAGGAAAATAAATGGAA+GGG + chr1_4:65992024-65992043 None:intergenic 25.0%
! AATATAGATACCAAGTTCTA+CGG + chr1_4:65992293-65992312 None:intergenic 25.0%
! AATGTTAAGTTATCTCAAGA+AGG - chr1_4:65993016-65993035 Msa0178670:CDS 25.0%
! TACATCTGTTTATGATATGA+TGG - chr1_4:65993153-65993172 Msa0178670:CDS 25.0%
! AAATAAATGGCAAATTCTAC+TGG + chr1_4:65993510-65993529 None:intergenic 25.0%
! TGAAAGAAAAACACATTCTT+TGG - chr1_4:65993530-65993549 Msa0178670:five_prime_UTR 25.0%
! TCATGATTGATATTACACTT+TGG + chr1_4:65993559-65993578 None:intergenic 25.0%
!!! GGTTTTTTTTTGGGTTAGAT+TGG + chr1_4:65986096-65986115 None:intergenic 30.0%
AAAGGTAAATTAGGAAAGTG+AGG + chr1_4:65986137-65986156 None:intergenic 30.0%
!!! TGTTGGAATTTTTTGTGGAA+AGG + chr1_4:65986155-65986174 None:intergenic 30.0%
! ACAATTCTGGTGCAAAATTT+TGG - chr1_4:65986194-65986213 Msa0178670:three_prime_UTR 30.0%
TTATGGGAGCTGAAAAAAAA+TGG - chr1_4:65986416-65986435 Msa0178670:three_prime_UTR 30.0%
TACCAAGATGAAGCAAATAA+CGG + chr1_4:65986648-65986667 None:intergenic 30.0%
TTATTTGCTTCATCTTGGTA+TGG - chr1_4:65986648-65986667 Msa0178670:CDS 30.0%
TGCTGCTATTATGCTTAAAT+TGG - chr1_4:65986816-65986835 Msa0178670:CDS 30.0%
!! TTGTGCCTTTTATTTGATTG+TGG - chr1_4:65986941-65986960 Msa0178670:CDS 30.0%
!! TTGTGCCTTTTATTTGATTG+TGG - chr1_4:65986941-65986960 Msa0178670:CDS 30.0%
TTTCCTAAATCAATCAAACC+TGG + chr1_4:65987377-65987396 None:intergenic 30.0%
GGGAAATGATTTCTTATCAT+TGG - chr1_4:65987488-65987507 Msa0178670:intron 30.0%
! CATAGATGCCTTTTCTTTTT+AGG - chr1_4:65987551-65987570 Msa0178670:intron 30.0%
TTCAAGGACCTAAAAAGAAA+AGG + chr1_4:65987562-65987581 None:intergenic 30.0%
!!! GGCTTTTTTAATTTGAGATC+CGG - chr1_4:65987648-65987667 Msa0178670:intron 30.0%
GTTATAACCTGAAGACATTT+CGG + chr1_4:65987704-65987723 None:intergenic 30.0%
! ATGTCTTCAGGTTATAACAT+TGG - chr1_4:65987706-65987725 Msa0178670:intron 30.0%
! TTCAGGTTATAACATTGGAT+TGG - chr1_4:65987711-65987730 Msa0178670:intron 30.0%
TAATTCGTTGTCCATACATA+AGG - chr1_4:65987905-65987924 Msa0178670:intron 30.0%
TACCAAACATTCCTTATGTA+TGG + chr1_4:65987919-65987938 None:intergenic 30.0%
TAATTCTTGACTTTACTTCC+TGG + chr1_4:65987946-65987965 None:intergenic 30.0%
AGTCAAGAATTAGTTAAGAG+GGG - chr1_4:65987954-65987973 Msa0178670:intron 30.0%
ATAGAGATAGAGATAGTAGA+AGG - chr1_4:65988045-65988064 Msa0178670:intron 30.0%
TAGAGATAGAGATAGTAGAA+GGG - chr1_4:65988046-65988065 Msa0178670:intron 30.0%
!! AGATAGTAGAAGGGTATTAA+AGG - chr1_4:65988055-65988074 Msa0178670:intron 30.0%
!! GATAGTAGAAGGGTATTAAA+GGG - chr1_4:65988056-65988075 Msa0178670:intron 30.0%
!! ATAGTAGAAGGGTATTAAAG+GGG - chr1_4:65988057-65988076 Msa0178670:intron 30.0%
! TCAGATAAGGCATTTATAGA+AGG - chr1_4:65988097-65988116 Msa0178670:intron 30.0%
! CAGATAAGGCATTTATAGAA+GGG - chr1_4:65988098-65988117 Msa0178670:intron 30.0%
!! ATTTATAGAAGGGTGCTTAT+AGG - chr1_4:65988108-65988127 Msa0178670:intron 30.0%
!! TTTATAGAAGGGTGCTTATA+GGG - chr1_4:65988109-65988128 Msa0178670:intron 30.0%
AGTTTGATGAATCTATACCT+CGG + chr1_4:65988240-65988259 None:intergenic 30.0%
ATTTCGGTTTCTCAATTCAT+AGG + chr1_4:65988441-65988460 None:intergenic 30.0%
TACAAATCTAAGAAGACTGA+AGG - chr1_4:65988474-65988493 Msa0178670:intron 30.0%
ATAAGAAAGTAACTGCAGAA+AGG - chr1_4:65989038-65989057 Msa0178670:intron 30.0%
! ACATTGGGTATTTTGTATGT+GGG + chr1_4:65989109-65989128 None:intergenic 30.0%
AATAAAGATGCAGAGGAAAA+GGG + chr1_4:65989135-65989154 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG + chr1_4:65989136-65989155 None:intergenic 30.0%
TTGTTCATGTTCAATTGCTT+GGG + chr1_4:65989504-65989523 None:intergenic 30.0%
ATTGTTCATGTTCAATTGCT+TGG + chr1_4:65989505-65989524 None:intergenic 30.0%
!! TTTTGGGGAATTCATTTATC+AGG + chr1_4:65989601-65989620 None:intergenic 30.0%
TAATGTATTTCACATGCCAA+GGG - chr1_4:65989761-65989780 Msa0178670:intron 30.0%
!! GCTTTGATTGATGATGTATT+AGG + chr1_4:65989787-65989806 None:intergenic 30.0%
! TAATTCTTTTTATGAGCAGG+AGG + chr1_4:65989882-65989901 None:intergenic 30.0%
AGTTACTAAGTACAACAAAG+TGG + chr1_4:65989932-65989951 None:intergenic 30.0%
GATAAGTTTATCCAAGTGAA+AGG + chr1_4:65989961-65989980 None:intergenic 30.0%
ACTTATCAGCAATCAGATAT+AGG - chr1_4:65989974-65989993 Msa0178670:intron 30.0%
TAAAGATGCTATTGATGAAG+GGG + chr1_4:65990092-65990111 None:intergenic 30.0%
CATAAAGATGCTATTGATGA+AGG + chr1_4:65990094-65990113 None:intergenic 30.0%
AATAGCATCTTTATGACTGA+AGG - chr1_4:65990099-65990118 Msa0178670:intron 30.0%
AACCTCTAAATTACAACCAT+AGG - chr1_4:65990161-65990180 Msa0178670:intron 30.0%
ACCTCTAAATTACAACCATA+GGG - chr1_4:65990162-65990181 Msa0178670:intron 30.0%
ATAAAACATAGACAACCCTA+TGG + chr1_4:65990180-65990199 None:intergenic 30.0%
CACAAAACAATTCTAGTAAG+TGG + chr1_4:65990257-65990276 None:intergenic 30.0%
GATCTAACAATAAACCTAGT+GGG + chr1_4:65990285-65990304 None:intergenic 30.0%
AGAAAAACAGTGGAACAAAT+TGG + chr1_4:65990323-65990342 None:intergenic 30.0%
!! TATGGAAGGTATTAGAAATG+TGG + chr1_4:65990440-65990459 None:intergenic 30.0%
!!! GACCCAAGTTATTTTTTGTT+TGG + chr1_4:65990463-65990482 None:intergenic 30.0%
ATGTGCTGAGTATTAATTGT+TGG - chr1_4:65990678-65990697 Msa0178670:intron 30.0%
TTTCTCTGTGATCCAAATAT+TGG - chr1_4:65991328-65991347 Msa0178670:intron 30.0%
!! AATTCCTACTTTTGATGGAA+AGG + chr1_4:65991399-65991418 None:intergenic 30.0%
!! AGACTAATTCCTACTTTTGA+TGG + chr1_4:65991404-65991423 None:intergenic 30.0%
ATAAGAAAGTAACTGCAGAA+AGG - chr1_4:65989038-65989057 Msa0178670:intron 30.0%
AATAAAGATGCAGAGGAAAA+GGG + chr1_4:65989135-65989154 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG + chr1_4:65989136-65989155 None:intergenic 30.0%
! TATTTTGTGAAATGAGTGAG+TGG + chr1_4:65991957-65991976 None:intergenic 30.0%
AAATAAATGGAAGGGAACAA+AGG + chr1_4:65992016-65992035 None:intergenic 30.0%
GAGAAAGGAAAATAAATGGA+AGG + chr1_4:65992025-65992044 None:intergenic 30.0%
ATTAGGCTGATGAAAATATG+TGG + chr1_4:65992181-65992200 None:intergenic 30.0%
!! TATTTATCTGCTTTGGTTCT+TGG - chr1_4:65992216-65992235 Msa0178670:intron 30.0%
GAAGAGACATGAGATATATA+AGG + chr1_4:65992444-65992463 None:intergenic 30.0%
ACAATCATTAGAAAGGTCTT+AGG + chr1_4:65992501-65992520 None:intergenic 30.0%
TATGAGCACAATCATTAGAA+AGG + chr1_4:65992508-65992527 None:intergenic 30.0%
! TTTTATTCAATTGCACATGC+AGG - chr1_4:65992697-65992716 Msa0178670:intron 30.0%
ACTGTTGTGTTCTTAAATTC+GGG + chr1_4:65993070-65993089 None:intergenic 30.0%
CACTGTTGTGTTCTTAAATT+CGG + chr1_4:65993071-65993090 None:intergenic 30.0%
TTTAAGAACACAACAGTGAA+TGG - chr1_4:65993073-65993092 Msa0178670:CDS 30.0%
TGACTTACGATACATGATAT+GGG - chr1_4:65993096-65993115 Msa0178670:CDS 30.0%
CTAAGAATAGAAACCATTGT+AGG - chr1_4:65993456-65993475 Msa0178670:CDS 30.0%
AGTGTAATATCAATCATGAG+AGG - chr1_4:65993560-65993579 Msa0178670:five_prime_UTR 30.0%
TAATATCAATCATGAGAGGT+GGG - chr1_4:65993564-65993583 Msa0178670:five_prime_UTR 30.0%
AAGAAACAAAAGTTGAGAGT+TGG - chr1_4:65993598-65993617 Msa0178670:five_prime_UTR 30.0%
!! TTTTGGAGGCTTGATATTTA+TGG - chr1_4:65993668-65993687 Msa0178670:five_prime_UTR 30.0%
TTATGAAAGTGAAAAGCAAG+AGG + chr1_4:65993740-65993759 None:intergenic 30.0%
!! GATAGCTAGCTTATTCTTTT+TGG - chr1_4:65993804-65993823 Msa0178670:five_prime_UTR 30.0%
! TCCAATCAATCTTTTCCTTT+TGG - chr1_4:65993856-65993875 Msa0178670:five_prime_UTR 30.0%
TATAACAAACAAGTGCCAAA+AGG + chr1_4:65993874-65993893 None:intergenic 30.0%
TTACAGAAGAAGATGGAGAT+TGG + chr1_4:65986061-65986080 None:intergenic 35.0%
! TTTGGGTTAGATTGGTTGTT+GGG + chr1_4:65986088-65986107 None:intergenic 35.0%
!!! TTTTGGGTTAGATTGGTTGT+TGG + chr1_4:65986089-65986108 None:intergenic 35.0%
!!! GAGGTCTAGGGTTTTTTTTT+GGG + chr1_4:65986105-65986124 None:intergenic 35.0%
!!! AGAGGTCTAGGGTTTTTTTT+TGG + chr1_4:65986106-65986125 None:intergenic 35.0%
!! AGGTTTGTTAAAGAGGTCTA+GGG + chr1_4:65986117-65986136 None:intergenic 35.0%
!! GAAAGTGAGGTTTGTTAAAG+AGG + chr1_4:65986124-65986143 None:intergenic 35.0%
! AAGTGGGTTTGGTTAAAGTT+TGG + chr1_4:65986355-65986374 None:intergenic 35.0%
!! TAGATTTTGAGAAGTGGGTT+TGG + chr1_4:65986366-65986385 None:intergenic 35.0%
! CATAACTGATTTCACTACGT+GGG + chr1_4:65986401-65986420 None:intergenic 35.0%
CACGTAGTGAAATCAGTTAT+GGG - chr1_4:65986400-65986419 Msa0178670:three_prime_UTR 35.0%
! TGTTGAACAAGTGATGGAAA+AGG + chr1_4:65986523-65986542 None:intergenic 35.0%
TTTCCATCACTTGTTCAACA+TGG - chr1_4:65986523-65986542 Msa0178670:CDS 35.0%
TAAAGTATGCAAAAGCAGGA+GGG + chr1_4:65986558-65986577 None:intergenic 35.0%
ATAAAGTATGCAAAAGCAGG+AGG + chr1_4:65986559-65986578 None:intergenic 35.0%
GAGATAAAGTATGCAAAAGC+AGG + chr1_4:65986562-65986581 None:intergenic 35.0%
! GCTTTTGCATACTTTATCTC+TGG - chr1_4:65986562-65986581 Msa0178670:CDS 35.0%
TTTGCATACTTTATCTCTGG+TGG - chr1_4:65986565-65986584 Msa0178670:CDS 35.0%
AACCGTTATTTGCTTCATCT+TGG - chr1_4:65986643-65986662 Msa0178670:CDS 35.0%
GCTGATTGGATCACTTATTT+GGG - chr1_4:65986763-65986782 Msa0178670:CDS 35.0%
!! TGCTTAAATTGGATAGTGGA+TGG - chr1_4:65986827-65986846 Msa0178670:CDS 35.0%
!! AATTGGATAGTGGATGGAAT+TGG - chr1_4:65986833-65986852 Msa0178670:CDS 35.0%
TGATTATCCTCTCATTACAC+AGG - chr1_4:65986876-65986895 Msa0178670:CDS 35.0%
! ACAGGATGGTATGCAAATTT+TGG - chr1_4:65986894-65986913 Msa0178670:CDS 35.0%
!! GTGTTTTAAACTAACGAGCT+TGG - chr1_4:65987019-65987038 Msa0178670:intron 35.0%
TATTGAGATTGTTCTGTGTG+TGG - chr1_4:65987050-65987069 Msa0178670:intron 35.0%
GAAACAAAACTCCTAAACAG+TGG + chr1_4:65987104-65987123 None:intergenic 35.0%
!! GTGTTTTAAACTAACGAGCT+TGG - chr1_4:65987019-65987038 Msa0178670:intron 35.0%
GAAACAAAACTCCTAAACAG+TGG + chr1_4:65987104-65987123 None:intergenic 35.0%
ATCAAACCTGGTCATGAAAA+CGG + chr1_4:65987365-65987384 None:intergenic 35.0%
! TGACCAGGTTTGATTGATTT+AGG - chr1_4:65987371-65987390 Msa0178670:intron 35.0%
TAATGCAGAACATGCAACTT+TGG + chr1_4:65987466-65987485 None:intergenic 35.0%
AGTTGCATGTTCTGCATTAT+AGG - chr1_4:65987467-65987486 Msa0178670:intron 35.0%
GTTGCATGTTCTGCATTATA+GGG - chr1_4:65987468-65987487 Msa0178670:intron 35.0%
! ATTTGAGATCCGGAAGTATA+AGG - chr1_4:65987658-65987677 Msa0178670:intron 35.0%
AATGATACCGAAATGTCTTC+AGG - chr1_4:65987694-65987713 Msa0178670:intron 35.0%
!! TAACATTGGATTGGTTGCAA+CGG - chr1_4:65987720-65987739 Msa0178670:intron 35.0%
TGAGTTTGTATAGGACACTA+AGG - chr1_4:65987861-65987880 Msa0178670:intron 35.0%
GTCCATACATAAGGAATGTT+TGG - chr1_4:65987914-65987933 Msa0178670:intron 35.0%
TTAAGAGGGGTCTATGAAAA+GGG - chr1_4:65987967-65987986 Msa0178670:intron 35.0%
GGTCTATGAAAAGGGTAAAA+AGG - chr1_4:65987975-65987994 Msa0178670:intron 35.0%
! AAAAGGTGTACAGTTGAAAC+AGG - chr1_4:65987992-65988011 Msa0178670:intron 35.0%
! AAAGGTGTACAGTTGAAACA+GGG - chr1_4:65987993-65988012 Msa0178670:intron 35.0%
!! TAGTAGAAGGGTATTAAAGG+GGG - chr1_4:65988058-65988077 Msa0178670:intron 35.0%
!! TTATAGAAGGGTGCTTATAG+GGG - chr1_4:65988110-65988129 Msa0178670:intron 35.0%
AAACTACCTCTATATGCTGA+GGG - chr1_4:65988255-65988274 Msa0178670:intron 35.0%
GAAACTTTCTGTGAAGAGAT+TGG - chr1_4:65988286-65988305 Msa0178670:intron 35.0%
ATGCAATCAGAAGAAACTCT+TGG + chr1_4:65988391-65988410 None:intergenic 35.0%
AATCTAAGAAGACTGAAGGA+TGG - chr1_4:65988478-65988497 Msa0178670:intron 35.0%
!! TTCTAGTTGCAGGGATTTTT+AGG - chr1_4:65988508-65988527 Msa0178670:intron 35.0%
GATTCCAGTGCTAAATTAGT+AGG - chr1_4:65988553-65988572 Msa0178670:intron 35.0%
ACTACCTACTAATTTAGCAC+TGG + chr1_4:65988560-65988579 None:intergenic 35.0%
AGTAGGTAGTCTAACTGATA+TGG - chr1_4:65988570-65988589 Msa0178670:intron 35.0%
AGTTATCGCAAAAGATAGAG+TGG - chr1_4:65988653-65988672 Msa0178670:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG + chr1_4:65989099-65989118 None:intergenic 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG + chr1_4:65989100-65989119 None:intergenic 35.0%
! GACATTGGGTATTTTGTATG+TGG + chr1_4:65989110-65989129 None:intergenic 35.0%
GTTAGATATAGGACTCCTAA+GGG + chr1_4:65989269-65989288 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG + chr1_4:65989270-65989289 None:intergenic 35.0%
TTATGTTATCCTTCACCTTG+AGG + chr1_4:65989321-65989340 None:intergenic 35.0%
! GTCACTCTACTTCAAGTTAT+GGG + chr1_4:65989358-65989377 None:intergenic 35.0%
! TGTCACTCTACTTCAAGTTA+TGG + chr1_4:65989359-65989378 None:intergenic 35.0%
! AGCACAATGAGAAGTTTTTG+GGG + chr1_4:65989616-65989635 None:intergenic 35.0%
! CAGCACAATGAGAAGTTTTT+GGG + chr1_4:65989617-65989636 None:intergenic 35.0%
! ACAGCACAATGAGAAGTTTT+TGG + chr1_4:65989618-65989637 None:intergenic 35.0%
AATTCCACTCCCATTGTAAT+TGG - chr1_4:65989723-65989742 Msa0178670:intron 35.0%
CTAATGTATTTCACATGCCA+AGG - chr1_4:65989760-65989779 Msa0178670:intron 35.0%
TATTGAGATCTCTTCAATGG+TGG + chr1_4:65989815-65989834 None:intergenic 35.0%
! GCGTAATTCTTTTTATGAGC+AGG + chr1_4:65989885-65989904 None:intergenic 35.0%
TTTATCCAAGTGAAAGGTGA+AGG + chr1_4:65989955-65989974 None:intergenic 35.0%
TCACCGATGATTGTTTGAAA+AGG - chr1_4:65990127-65990146 Msa0178670:intron 35.0%
ACCCTATGGTTGTAATTTAG+AGG + chr1_4:65990166-65990185 None:intergenic 35.0%
AGTGGGTGAGAGAAATTAAA+AGG + chr1_4:65990239-65990258 None:intergenic 35.0%
GGATCTAACAATAAACCTAG+TGG + chr1_4:65990286-65990305 None:intergenic 35.0%
! AAATTGGTCAGGTTGTATGT+TGG + chr1_4:65990307-65990326 None:intergenic 35.0%
AGTAGATGATACAAACCAGA+AGG + chr1_4:65990346-65990365 None:intergenic 35.0%
TAGCCATTGGGTTATGAAAA+GGG + chr1_4:65990379-65990398 None:intergenic 35.0%
ATAGCCATTGGGTTATGAAA+AGG + chr1_4:65990380-65990399 None:intergenic 35.0%
AGGAATAGAGTTACTAGGTT+CGG + chr1_4:65990415-65990434 None:intergenic 35.0%
! AAGGTATTAGAAATGTGGAC+AGG + chr1_4:65990435-65990454 None:intergenic 35.0%
GATAACAGGGTCAATTGTTA+AGG + chr1_4:65990514-65990533 None:intergenic 35.0%
AAACTATGAAGAGTCAAAGG+AGG + chr1_4:65991099-65991118 None:intergenic 35.0%
ACGTGGAAGATATTTGAAAG+AGG + chr1_4:65991221-65991240 None:intergenic 35.0%
TTGGATCACAGAGAAAATGA+AGG + chr1_4:65991324-65991343 None:intergenic 35.0%
!! GGTACTTTGAAGCCAATATT+TGG + chr1_4:65991343-65991362 None:intergenic 35.0%
!!! CTTCAAAGTACCGTTTTAAC+TGG - chr1_4:65991351-65991370 Msa0178670:intron 35.0%
ATGGAAAGGAAGATGTCTAT+TGG + chr1_4:65991385-65991404 None:intergenic 35.0%
TCTTCCTTTCCATCAAAAGT+AGG - chr1_4:65991392-65991411 Msa0178670:intron 35.0%
! ATTAGTCTCTCCAACATCAT+TGG - chr1_4:65991416-65991435 Msa0178670:intron 35.0%
GTTAGATATAGGACTCCTAA+GGG + chr1_4:65989269-65989288 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG + chr1_4:65989270-65989289 None:intergenic 35.0%
GGAGGAGAAAGGAAAATAAA+TGG + chr1_4:65992029-65992048 None:intergenic 35.0%
GGCAACATATTTATCTGCTT+TGG - chr1_4:65992209-65992228 Msa0178670:intron 35.0%
AATGCTTTGTGCTTAGTATG+AGG + chr1_4:65992254-65992273 None:intergenic 35.0%
TCATACTAAGCACAAAGCAT+TGG - chr1_4:65992253-65992272 Msa0178670:intron 35.0%
GAAATTGAGGTCTCTATTCA+CGG + chr1_4:65992574-65992593 None:intergenic 35.0%
CAGTGTGATCAATGAAATTG+AGG + chr1_4:65992587-65992606 None:intergenic 35.0%
CTCAATTTCATTGATCACAC+TGG - chr1_4:65992585-65992604 Msa0178670:intron 35.0%
TTTCATACTCTTTCCATCCA+AGG + chr1_4:65992614-65992633 None:intergenic 35.0%
TGAATCATACCTCTACTTTG+TGG - chr1_4:65992642-65992661 Msa0178670:intron 35.0%
ATCCAGGAACATATTTAGCA+AGG - chr1_4:65992748-65992767 Msa0178670:intron 35.0%
AAAATGCAGAACTCCAGAAA+GGG + chr1_4:65992953-65992972 None:intergenic 35.0%
!!! TTTCTGGAGTTCTGCATTTT+CGG - chr1_4:65992953-65992972 Msa0178670:intron 35.0%
AAATACATTAGTAGCGTTCG+TGG + chr1_4:65992992-65993011 None:intergenic 35.0%
GTGACTTACGATACATGATA+TGG - chr1_4:65993095-65993114 Msa0178670:CDS 35.0%
ACAGATGTATTAAGGAAGAG+AGG + chr1_4:65993142-65993161 None:intergenic 35.0%
TATGATATGATGGCAGAAAG+TGG - chr1_4:65993163-65993182 Msa0178670:CDS 35.0%
TTTGTCAATCATATCCAGCA+CGG + chr1_4:65993224-65993243 None:intergenic 35.0%
GACAAAAAAATTCTCCAACG+TGG - chr1_4:65993238-65993257 Msa0178670:CDS 35.0%
AAAAAAATTCTCCAACGTGG+TGG - chr1_4:65993241-65993260 Msa0178670:CDS 35.0%
GATGTCAATATTCTTAAGCC+AGG - chr1_4:65993340-65993359 Msa0178670:CDS 35.0%
GTAATATCAATCATGAGAGG+TGG - chr1_4:65993563-65993582 Msa0178670:five_prime_UTR 35.0%
AATATCAATCATGAGAGGTG+GGG - chr1_4:65993565-65993584 Msa0178670:five_prime_UTR 35.0%
ACAAAAGTTGAGAGTTGGAA+TGG - chr1_4:65993603-65993622 Msa0178670:five_prime_UTR 35.0%
CAAAAGTTGAGAGTTGGAAT+GGG - chr1_4:65993604-65993623 Msa0178670:five_prime_UTR 35.0%
AAAAGTTGAGAGTTGGAATG+GGG - chr1_4:65993605-65993624 Msa0178670:five_prime_UTR 35.0%
!! AAATGCATTTTGATGAGCCT+TGG - chr1_4:65993633-65993652 Msa0178670:five_prime_UTR 35.0%
!! AATGCATTTTGATGAGCCTT+GGG - chr1_4:65993634-65993653 Msa0178670:five_prime_UTR 35.0%
!! ACTTGATTCAAAGGCATCAT+TGG + chr1_4:65993702-65993721 None:intergenic 35.0%
AATGATGCCTTTGAATCAAG+TGG - chr1_4:65993701-65993720 Msa0178670:five_prime_UTR 35.0%
ATGATGCCTTTGAATCAAGT+GGG - chr1_4:65993702-65993721 Msa0178670:five_prime_UTR 35.0%
GGAAAAGATTGATTGGAGAA+TGG + chr1_4:65993853-65993872 None:intergenic 35.0%
GCCAAAAGGAAAAGATTGAT+TGG + chr1_4:65993860-65993879 None:intergenic 35.0%
AAGATGGAGATTGGAGATCA+CGG + chr1_4:65986052-65986071 None:intergenic 40.0%
! TTGGGTTAGATTGGTTGTTG+GGG + chr1_4:65986087-65986106 None:intergenic 40.0%
!! GAGGTTTGTTAAAGAGGTCT+AGG + chr1_4:65986118-65986137 None:intergenic 40.0%
! TAATGGGTCGTTGAAGATCT+TGG + chr1_4:65986313-65986332 None:intergenic 40.0%
! CCATAACTGATTTCACTACG+TGG + chr1_4:65986402-65986421 None:intergenic 40.0%
CCACGTAGTGAAATCAGTTA+TGG - chr1_4:65986399-65986418 Msa0178670:three_prime_UTR 40.0%
GAACCATGTTGAACAAGTGA+TGG + chr1_4:65986529-65986548 None:intergenic 40.0%
! TACTTTATCTCTGGTGGACA+TGG - chr1_4:65986571-65986590 Msa0178670:CDS 40.0%
CCAACAACAAACGAAAGATC+CGG + chr1_4:65986606-65986625 None:intergenic 40.0%
TGAAGCAAATAACGGTTCCT+CGG + chr1_4:65986640-65986659 None:intergenic 40.0%
TTCATCTTGGTATGGATGCT+AGG - chr1_4:65986656-65986675 Msa0178670:CDS 40.0%
TTTGGGAATGTTGATGTGGT+TGG - chr1_4:65986736-65986755 Msa0178670:CDS 40.0%
! GAATGTTGATGTGGTTGGTA+AGG - chr1_4:65986741-65986760 Msa0178670:CDS 40.0%
GGCTGATTGGATCACTTATT+TGG - chr1_4:65986762-65986781 Msa0178670:CDS 40.0%
ACGTAGCGTAATAGCAACAT+TGG + chr1_4:65986794-65986813 None:intergenic 40.0%
TATCCTCTCATTACACAGGA+TGG - chr1_4:65986880-65986899 Msa0178670:CDS 40.0%
ATACCATCCTGTGTAATGAG+AGG + chr1_4:65986886-65986905 None:intergenic 40.0%
GTAATGAGTGTGATGTGAGT+TGG - chr1_4:65986979-65986998 Msa0178670:intron 40.0%
!! TGTGGTGGTTTGGTATTCAT+TGG - chr1_4:65987068-65987087 Msa0178670:CDS 40.0%
! GAATGTTTCTGCCACTGTTT+AGG - chr1_4:65987090-65987109 Msa0178670:CDS 40.0%
GTAATGAGTGTGATGTGAGT+TGG - chr1_4:65986979-65986998 Msa0178670:intron 40.0%
CATTGAGATTGTTCTGTGTG+TGG - chr1_4:65987256-65987275 Msa0178670:intron 40.0%
!! TGTGGTGGTTTGGTATTCAT+TGG - chr1_4:65987068-65987087 Msa0178670:CDS 40.0%
! GAATGTTTCTGCCACTGTTT+AGG - chr1_4:65987090-65987109 Msa0178670:CDS 40.0%
! TATTCACCGTTTTCATGACC+AGG - chr1_4:65987356-65987375 Msa0178670:intron 40.0%
! ATCAAAGTACCATGTGGACA+GGG + chr1_4:65987761-65987780 None:intergenic 40.0%
! AATCAAAGTACCATGTGGAC+AGG + chr1_4:65987762-65987781 None:intergenic 40.0%
! AGGAATGTTTGGTAATAGCC+AGG - chr1_4:65987925-65987944 Msa0178670:intron 40.0%
GTTAAGAGGGGTCTATGAAA+AGG - chr1_4:65987966-65987985 Msa0178670:intron 40.0%
AAGGTGTACAGTTGAAACAG+GGG - chr1_4:65987994-65988013 Msa0178670:intron 40.0%
TTGAAACAGGGGTCACAAAT+AGG - chr1_4:65988005-65988024 Msa0178670:intron 40.0%
TGAAACAGGGGTCACAAATA+GGG - chr1_4:65988006-65988025 Msa0178670:intron 40.0%
!! AGTAGAAGGGTATTAAAGGG+GGG - chr1_4:65988059-65988078 Msa0178670:intron 40.0%
GAGGGTTTCAGTTTCAGATA+AGG - chr1_4:65988084-65988103 Msa0178670:intron 40.0%
CAAACTACCTCTATATGCTG+AGG - chr1_4:65988254-65988273 Msa0178670:intron 40.0%
CTAACTGATATGGTGACTAG+AGG - chr1_4:65988580-65988599 Msa0178670:intron 40.0%
AAAAGATAGAGTGGTGTGAG+TGG - chr1_4:65988662-65988681 Msa0178670:intron 40.0%
AAAGATAGAGTGGTGTGAGT+GGG - chr1_4:65988663-65988682 Msa0178670:intron 40.0%
AAGTTGAGTTCATCATCGCT+GGG - chr1_4:65988713-65988732 Msa0178670:intron 40.0%
TAGCTTCATTCACTGTCATG+AGG + chr1_4:65988779-65988798 None:intergenic 40.0%
GTTTGCTTTCGCATTTGCAA+GGG + chr1_4:65988837-65988856 None:intergenic 40.0%
TGTTTGCTTTCGCATTTGCA+AGG + chr1_4:65988838-65988857 None:intergenic 40.0%
AGGTATATACACTGTCAGCA+AGG + chr1_4:65988901-65988920 None:intergenic 40.0%
! TGGGTATTTTGTATGTGGGT+TGG + chr1_4:65989105-65989124 None:intergenic 40.0%
!! GGGGGAGTATTGTTAGATAT+AGG + chr1_4:65989280-65989299 None:intergenic 40.0%
AGGACAAGGTGAATCTTTAG+GGG + chr1_4:65989301-65989320 None:intergenic 40.0%
GAGGACAAGGTGAATCTTTA+GGG + chr1_4:65989302-65989321 None:intergenic 40.0%
TGAGGACAAGGTGAATCTTT+AGG + chr1_4:65989303-65989322 None:intergenic 40.0%
AAAGATTCACCTTGTCCTCA+AGG - chr1_4:65989303-65989322 Msa0178670:intron 40.0%
GATAACATAAGTGTCCACCA+GGG - chr1_4:65989331-65989350 Msa0178670:intron 40.0%
TCAAGGCTACTCTAGTAGTT+AGG + chr1_4:65989461-65989480 None:intergenic 40.0%
TGTTGCTACAGCACAAAGTA+AGG - chr1_4:65989539-65989558 Msa0178670:intron 40.0%
ATGACTCGATCACTTGCAAT+GGG + chr1_4:65989697-65989716 None:intergenic 40.0%
GGTTGCCAACCAATTACAAT+GGG + chr1_4:65989735-65989754 None:intergenic 40.0%
!! TTGATGATGTATTAGGCCCT+TGG + chr1_4:65989780-65989799 None:intergenic 40.0%
! TTTTATGAGCAGGAGGAACA+TGG + chr1_4:65989875-65989894 None:intergenic 40.0%
TAACTCCTTCACCTTTCACT+TGG - chr1_4:65989947-65989966 Msa0178670:intron 40.0%
GAATTCCATCTCAAGGTCAT+TGG + chr1_4:65990005-65990024 None:intergenic 40.0%
CAAACAGGAATTCCATCTCA+AGG + chr1_4:65990012-65990031 None:intergenic 40.0%
ATTGATGAAGGGGCTCTTAA+AGG + chr1_4:65990082-65990101 None:intergenic 40.0%
GGGTGAGAGAAATTAAAAGG+TGG + chr1_4:65990236-65990255 None:intergenic 40.0%
! AACAATAAACCTAGTGGGTC+AGG + chr1_4:65990280-65990299 None:intergenic 40.0%
AACAGTGGAACAAATTGGTC+AGG + chr1_4:65990318-65990337 None:intergenic 40.0%
!! TTCCACTGTTTTTCTCCTTC+TGG - chr1_4:65990328-65990347 Msa0178670:intron 40.0%
AACCAGAAGGAGAAAAACAG+TGG + chr1_4:65990333-65990352 None:intergenic 40.0%
AGCCATTGGGTTATGAAAAG+GGG + chr1_4:65990378-65990397 None:intergenic 40.0%
TGGACAGGAATAGAGTTACT+AGG + chr1_4:65990420-65990439 None:intergenic 40.0%
ACAGGGTCAATTGTTAAGGT+TGG + chr1_4:65990510-65990529 None:intergenic 40.0%
GTGAGGTCAAAAGGATAACA+GGG + chr1_4:65990527-65990546 None:intergenic 40.0%
TGTGAGGTCAAAAGGATAAC+AGG + chr1_4:65990528-65990547 None:intergenic 40.0%
ATCTGCAGGTCACAATGAAT+CGG + chr1_4:65990961-65990980 None:intergenic 40.0%
TGCATGGTACAAAAATCTGC+AGG + chr1_4:65990975-65990994 None:intergenic 40.0%
TATGAAGAGTCAAAGGAGGT+TGG + chr1_4:65991095-65991114 None:intergenic 40.0%
TCTCATTCAGAACGTACTCA+TGG - chr1_4:65991126-65991145 Msa0178670:intron 40.0%
GAAATTCATCCCAGACCTAT+GGG + chr1_4:65991189-65991208 None:intergenic 40.0%
AGAAATTCATCCCAGACCTA+TGG + chr1_4:65991190-65991209 None:intergenic 40.0%
!! TGGTGGTCTTATTGGAAGAA+TGG + chr1_4:65991257-65991276 None:intergenic 40.0%
CTTCCAATAAGACCACCAAT+TGG - chr1_4:65991259-65991278 Msa0178670:intron 40.0%
!! CTTCCAATTGGTGGTCTTAT+TGG + chr1_4:65991265-65991284 None:intergenic 40.0%
GTTACTCTGTATGCTTTCAG+AGG + chr1_4:65991293-65991312 None:intergenic 40.0%
AGAGAAAATGAAGGTCGACT+GGG + chr1_4:65991315-65991334 None:intergenic 40.0%
GGTGGTTGATCCAGTTAAAA+CGG + chr1_4:65991364-65991383 None:intergenic 40.0%
GAAAGGAAGATGTCTATTGG+TGG + chr1_4:65991382-65991401 None:intergenic 40.0%
CTGATACCAGTGTTAGATAC+TGG - chr1_4:65991504-65991523 Msa0178670:intron 40.0%
TCTGAACCAGTATCTAACAC+TGG + chr1_4:65991513-65991532 None:intergenic 40.0%
GTGGATGTCAGATATTGATG+TGG + chr1_4:65991938-65991957 None:intergenic 40.0%
!! GAGAGAAGAAGGTGTTAGTT+TGG + chr1_4:65991983-65992002 None:intergenic 40.0%
ACACCTTCTTCTCTCTTCTT+TGG - chr1_4:65991988-65992007 Msa0178670:intron 40.0%
ACATAACCTGAACGAATGAG+CGG + chr1_4:65992085-65992104 None:intergenic 40.0%
! TGACACAAACTGTTTGAGGT+TGG - chr1_4:65992155-65992174 Msa0178670:intron 40.0%
TATGTTGCCAGTTCGCAATT+AGG + chr1_4:65992198-65992217 None:intergenic 40.0%
ATACCAAGTTCTACGGTCAT+CGG + chr1_4:65992286-65992305 None:intergenic 40.0%
GAATAAGTGCCACAAAGTAG+AGG + chr1_4:65992654-65992673 None:intergenic 40.0%
CTTTGTGGCACTTATTCAGT+TGG - chr1_4:65992657-65992676 Msa0178670:intron 40.0%
AAGCCTATTGTAGTTGATCC+AGG - chr1_4:65992732-65992751 Msa0178670:intron 40.0%
GTTCCTGGATCAACTACAAT+AGG + chr1_4:65992738-65992757 None:intergenic 40.0%
CTCCTTGCTAAATATGTTCC+TGG + chr1_4:65992753-65992772 None:intergenic 40.0%
GTGAAGAGTTTGAATGCATC+AGG + chr1_4:65992813-65992832 None:intergenic 40.0%
GATGCATTCAAACTCTTCAC+TGG - chr1_4:65992813-65992832 Msa0178670:intron 40.0%
GAAAATGCAGAACTCCAGAA+AGG + chr1_4:65992954-65992973 None:intergenic 40.0%
TTGTCAATCATATCCAGCAC+GGG + chr1_4:65993223-65993242 None:intergenic 40.0%
! TTTCTAGCCTTCTTGATGAC+TGG - chr1_4:65993392-65993411 Msa0178670:CDS 40.0%
AGTGTCTATGATGTGATCAC+TGG + chr1_4:65993438-65993457 None:intergenic 40.0%
!! ATGCATTTTGATGAGCCTTG+GGG - chr1_4:65993635-65993654 Msa0178670:five_prime_UTR 40.0%
CAAAATAATACAGCACCCCA+AGG + chr1_4:65993653-65993672 None:intergenic 40.0%
!!! CTTGGGGTGCTGTATTATTT+TGG - chr1_4:65993651-65993670 Msa0178670:five_prime_UTR 40.0%
!! TGATTCAAAGGCATCATTGG+AGG + chr1_4:65993699-65993718 None:intergenic 40.0%
TATCCTCCCACTTGATTCAA+AGG + chr1_4:65993711-65993730 None:intergenic 40.0%
! TGGGTTAGATTGGTTGTTGG+GGG + chr1_4:65986086-65986105 None:intergenic 45.0%
GTGGACATGGTGATAAAGAC+CGG - chr1_4:65986584-65986603 Msa0178670:CDS 45.0%
!! CCGGATCTTTCGTTTGTTGT+TGG - chr1_4:65986603-65986622 Msa0178670:CDS 45.0%
! TGTTGGCTGTTTATCATCCG+AGG - chr1_4:65986620-65986639 Msa0178670:CDS 45.0%
TGCTAGGAATGAAGAGAGAC+AGG - chr1_4:65986672-65986691 Msa0178670:CDS 45.0%
GCTAGGAATGAAGAGAGACA+GGG - chr1_4:65986673-65986692 Msa0178670:CDS 45.0%
CTAGGAATGAAGAGAGACAG+GGG - chr1_4:65986674-65986693 Msa0178670:CDS 45.0%
!! TGATGCCGTTAGTTCTGTTC+CGG - chr1_4:65986702-65986721 Msa0178670:CDS 45.0%
AATCGCCGGAACAGAACTAA+CGG + chr1_4:65986710-65986729 None:intergenic 45.0%
!! TTAGTTCTGTTCCGGCGATT+CGG - chr1_4:65986710-65986729 Msa0178670:CDS 45.0%
!! GGCTTTTGGGAATGTTGATG+TGG - chr1_4:65986732-65986751 Msa0178670:CDS 45.0%
!! ATGTGGTTGGTAAGGCTGAT+TGG - chr1_4:65986749-65986768 Msa0178670:CDS 45.0%
TGAGATTGTTCTGTGTGTGG+TGG - chr1_4:65987053-65987072 Msa0178670:intron 45.0%
TTGTTCTGTGTGTGGTGGTT+TGG - chr1_4:65987058-65987077 Msa0178670:intron 45.0%
TGAGATTGTTCTGTGTGTGG+TGG - chr1_4:65987053-65987072 Msa0178670:intron 45.0%
TTGTTCTGTGTGTGGTGGTT+TGG - chr1_4:65987058-65987077 Msa0178670:intron 45.0%
TAAAATGAGCCCTGTCCACA+TGG - chr1_4:65987749-65987768 Msa0178670:intron 45.0%
GAAACAGGGGTCACAAATAG+GGG - chr1_4:65988007-65988026 Msa0178670:intron 45.0%
AAACAGGGGTCACAAATAGG+GGG - chr1_4:65988008-65988027 Msa0178670:intron 45.0%
AGCAAAGAGGAACAGGCAAA+GGG + chr1_4:65988167-65988186 None:intergenic 45.0%
TGTAACCAGCAAAGAGGAAC+AGG + chr1_4:65988174-65988193 None:intergenic 45.0%
AATGGCTGTAACCAGCAAAG+AGG + chr1_4:65988180-65988199 None:intergenic 45.0%
!! TGAAGAGATTGGTTCTGAGC+TGG - chr1_4:65988297-65988316 Msa0178670:intron 45.0%
!! GAAGAGATTGGTTCTGAGCT+GGG - chr1_4:65988298-65988317 Msa0178670:intron 45.0%
!! AAGAGATTGGTTCTGAGCTG+GGG - chr1_4:65988299-65988318 Msa0178670:intron 45.0%
AAGAAGACTGAAGGATGGCA+TGG - chr1_4:65988483-65988502 Msa0178670:intron 45.0%
! TGGCATGGTATTCTAGTTGC+AGG - chr1_4:65988498-65988517 Msa0178670:intron 45.0%
! GGCATGGTATTCTAGTTGCA+GGG - chr1_4:65988499-65988518 Msa0178670:intron 45.0%
AAGATAGAGTGGTGTGAGTG+GGG - chr1_4:65988664-65988683 Msa0178670:intron 45.0%
GAAGTTGAGTTCATCATCGC+TGG - chr1_4:65988712-65988731 Msa0178670:intron 45.0%
AGTTGAGTTCATCATCGCTG+GGG - chr1_4:65988714-65988733 Msa0178670:intron 45.0%
CAGTGAATGAAGCTACCAAC+TGG - chr1_4:65988784-65988803 Msa0178670:intron 45.0%
GTTCAATGTGAAGCTCCAGT+TGG + chr1_4:65988802-65988821 None:intergenic 45.0%
CAGAAAGGTAACCAACCTCT+AGG - chr1_4:65989053-65989072 Msa0178670:intron 45.0%
AGAGGAAAAGGGTGGACATT+GGG + chr1_4:65989124-65989143 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+TGG + chr1_4:65989132-65989151 None:intergenic 45.0%
! ACAAGGTGAATCTTTAGGGG+GGG + chr1_4:65989298-65989317 None:intergenic 45.0%
! GACAAGGTGAATCTTTAGGG+GGG + chr1_4:65989299-65989318 None:intergenic 45.0%
GGACAAGGTGAATCTTTAGG+GGG + chr1_4:65989300-65989319 None:intergenic 45.0%
TATCCTTCACCTTGAGGACA+AGG + chr1_4:65989315-65989334 None:intergenic 45.0%
GGATAACATAAGTGTCCACC+AGG - chr1_4:65989330-65989349 Msa0178670:intron 45.0%
! TACTTCAAGTTATGGGACCC+TGG + chr1_4:65989351-65989370 None:intergenic 45.0%
!!! ACGGCTGTTTTTCTAGTGGT+CGG + chr1_4:65989390-65989409 None:intergenic 45.0%
ATTCTCTCATCTCAGCCTTG+AGG + chr1_4:65989415-65989434 None:intergenic 45.0%
CAAGGCTGAGATGAGAGAAT+TGG - chr1_4:65989415-65989434 Msa0178670:intron 45.0%
CTTGCAAGCTACTTGTGTCA+AGG + chr1_4:65989478-65989497 None:intergenic 45.0%
CACAAAGTAAGGCGACAACT+AGG - chr1_4:65989550-65989569 Msa0178670:intron 45.0%
TAAGGCGACAACTAGGACAA+TGG - chr1_4:65989557-65989576 Msa0178670:intron 45.0%
AAAACCGAGTCATTTCCTCC+AGG - chr1_4:65989646-65989665 Msa0178670:intron 45.0%
GATGACTCGATCACTTGCAA+TGG + chr1_4:65989698-65989717 None:intergenic 45.0%
ACAATGGGAGTGGAATTGTG+TGG + chr1_4:65989720-65989739 None:intergenic 45.0%
CCAACCAATTACAATGGGAG+TGG + chr1_4:65989730-65989749 None:intergenic 45.0%
CCACTCCCATTGTAATTGGT+TGG - chr1_4:65989727-65989746 Msa0178670:intron 45.0%
CGGTTGCCAACCAATTACAA+TGG + chr1_4:65989736-65989755 None:intergenic 45.0%
! GATCTCTTCAATGGTGGTGA+TGG + chr1_4:65989809-65989828 None:intergenic 45.0%
GAGGAACATGGAAGTGGAAA+GGG + chr1_4:65989863-65989882 None:intergenic 45.0%
CCATTGGGTTATGAAAAGGG+GGG + chr1_4:65990376-65990395 None:intergenic 45.0%
GCCATTGGGTTATGAAAAGG+GGG + chr1_4:65990377-65990396 None:intergenic 45.0%
GGAAGGATTGTGAGGTCAAA+AGG + chr1_4:65990536-65990555 None:intergenic 45.0%
TTCAGTTGGGAAGGATTGTG+AGG + chr1_4:65990544-65990563 None:intergenic 45.0%
GTTTCAACGTCGCTTCAGTT+GGG + chr1_4:65990557-65990576 None:intergenic 45.0%
GCAACACACTTGCAACTGAA+CGG + chr1_4:65990584-65990603 None:intergenic 45.0%
TGGCATCAACCAACTTGCAA+TGG + chr1_4:65990628-65990647 None:intergenic 45.0%
!! ATTGCAAGTTGGTTGATGCC+AGG - chr1_4:65990627-65990646 Msa0178670:intron 45.0%
CTTCAGATGCAACAAGAGAC+AGG + chr1_4:65990731-65990750 None:intergenic 45.0%
AACCTGTGACAGATCTCCAA+CGG + chr1_4:65990788-65990807 None:intergenic 45.0%
! GTTGGTAAGGAGACAAACTC+TGG + chr1_4:65991077-65991096 None:intergenic 45.0%
!! AGAGTCAAAGGAGGTTGGTA+AGG + chr1_4:65991090-65991109 None:intergenic 45.0%
TCAGAGGAGAAGCTTCCAAT+TGG + chr1_4:65991277-65991296 None:intergenic 45.0%
CAGAGAAAATGAAGGTCGAC+TGG + chr1_4:65991316-65991335 None:intergenic 45.0%
AGAGTGAGAGCCAATGATGT+TGG + chr1_4:65991429-65991448 None:intergenic 45.0%
CAGAAAGGTAACCAACCTCT+AGG - chr1_4:65989053-65989072 Msa0178670:intron 45.0%
!!! TTTTGGGTGTGGGTTGGTTT+GGG + chr1_4:65991681-65991700 None:intergenic 45.0%
!!! ATTTTGGGTGTGGGTTGGTT+TGG + chr1_4:65991682-65991701 None:intergenic 45.0%
!! GCATTGGGTATTTTGGGTGT+GGG + chr1_4:65991691-65991710 None:intergenic 45.0%
AAGATGCAGAGGAAAAGGGT+GGG + chr1_4:65989131-65989150 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+TGG + chr1_4:65989132-65989151 None:intergenic 45.0%
TCAAGACAGAGTTGAGAGCA+GGG + chr1_4:65991884-65991903 None:intergenic 45.0%
ATCAAGACAGAGTTGAGAGC+AGG + chr1_4:65991885-65991904 None:intergenic 45.0%
GAGCCAAAGAAGAGAGAAGA+AGG + chr1_4:65991994-65992013 None:intergenic 45.0%
! GTGAAAGTGATGGAGGAGAA+AGG + chr1_4:65992040-65992059 None:intergenic 45.0%
! AGAGAGTGTGAAAGTGATGG+AGG + chr1_4:65992047-65992066 None:intergenic 45.0%
! GTGAGAGAGTGTGAAAGTGA+TGG + chr1_4:65992050-65992069 None:intergenic 45.0%
TTTGCATCAGAACTGTGCAG+AGG - chr1_4:65992119-65992138 Msa0178670:intron 45.0%
TGGCTGACACAAACTGTTTG+AGG - chr1_4:65992151-65992170 Msa0178670:intron 45.0%
TCATCAGCCTAATTGCGAAC+TGG - chr1_4:65992188-65992207 Msa0178670:intron 45.0%
!! TGCTTTGGTTCTTGGAGTTG+TGG - chr1_4:65992224-65992243 Msa0178670:intron 45.0%
ATTGAGGTCTCTATTCACGG+AGG + chr1_4:65992571-65992590 None:intergenic 45.0%
ATTGATCACACTGGTGACCT+TGG - chr1_4:65992594-65992613 Msa0178670:intron 45.0%
! GTAGAGGTATGATTCAGCAG+TGG + chr1_4:65992638-65992657 None:intergenic 45.0%
! TGGAGTTCTGCATTTTCGGT+TGG - chr1_4:65992957-65992976 Msa0178670:intron 45.0%
! GGAGTTCTGCATTTTCGGTT+GGG - chr1_4:65992958-65992977 Msa0178670:intron 45.0%
AGGAAGAGAGGTTCCATCTT+CGG + chr1_4:65993130-65993149 None:intergenic 45.0%
AGCATTTGCAAGACAGTTCG+AGG - chr1_4:65993189-65993208 Msa0178670:CDS 45.0%
TGTCAATCATATCCAGCACG+GGG + chr1_4:65993222-65993241 None:intergenic 45.0%
TATTCTTAAGCCAGGTCCTC+AGG - chr1_4:65993348-65993367 Msa0178670:CDS 45.0%
TCCTCAGGCTAAAAAGCTTG+AGG - chr1_4:65993363-65993382 Msa0178670:CDS 45.0%
TTGAGAGTTGGAATGGGGAA+GGG - chr1_4:65993610-65993629 Msa0178670:five_prime_UTR 45.0%
!!! GGGGTGCTGTATTATTTTGG+AGG - chr1_4:65993654-65993673 Msa0178670:five_prime_UTR 45.0%
ATGCCTTTGAATCAAGTGGG+AGG - chr1_4:65993705-65993724 Msa0178670:five_prime_UTR 45.0%
GGGGGAGTTACAGAAGAAGA+TGG + chr1_4:65986068-65986087 None:intergenic 50.0%
GAATGAAGAGAGACAGGGGT+TGG - chr1_4:65986678-65986697 Msa0178670:CDS 50.0%
! TAGTTCTGTTCCGGCGATTC+GGG - chr1_4:65986711-65986730 Msa0178670:CDS 50.0%
!! AGAAGGGTATTAAAGGGGGG+TGG - chr1_4:65988062-65988081 Msa0178670:intron 50.0%
!! AGAAGGGTGCTTATAGGGGA+TGG - chr1_4:65988114-65988133 Msa0178670:intron 50.0%
!! GAAGGGTGCTTATAGGGGAT+GGG - chr1_4:65988115-65988134 Msa0178670:intron 50.0%
!! AAGGGTGCTTATAGGGGATG+GGG - chr1_4:65988116-65988135 Msa0178670:intron 50.0%
GCAAAGAGGAACAGGCAAAG+GGG + chr1_4:65988166-65988185 None:intergenic 50.0%
CAGCAAAGAGGAACAGGCAA+AGG + chr1_4:65988168-65988187 None:intergenic 50.0%
CTTTGCCTGTTCCTCTTTGC+TGG - chr1_4:65988166-65988185 Msa0178670:intron 50.0%
CGAGTTCCCTCAGCATATAG+AGG + chr1_4:65988264-65988283 None:intergenic 50.0%
GCGTCACGATTCAAGGGAAA+TGG - chr1_4:65988690-65988709 Msa0178670:intron 50.0%
GCTCTCTAACTCCTAGAGGT+TGG + chr1_4:65989067-65989086 None:intergenic 50.0%
CTAGGCTCTCTAACTCCTAG+AGG + chr1_4:65989071-65989090 None:intergenic 50.0%
CAGAGGAAAAGGGTGGACAT+TGG + chr1_4:65989125-65989144 None:intergenic 50.0%
TCACCTTGTCCTCAAGGTGA+AGG - chr1_4:65989309-65989328 Msa0178670:intron 50.0%
! TTCAAGTTATGGGACCCTGG+TGG + chr1_4:65989348-65989367 None:intergenic 50.0%
!!! GGACACGGCTGTTTTTCTAG+TGG + chr1_4:65989394-65989413 None:intergenic 50.0%
GAAAAACAGCCGTGTCCTCA+AGG - chr1_4:65989397-65989416 Msa0178670:intron 50.0%
TCATCTCAGCCTTGAGGACA+CGG + chr1_4:65989409-65989428 None:intergenic 50.0%
GGATCCTGGAGGAAATGACT+CGG + chr1_4:65989653-65989672 None:intergenic 50.0%
TTCCTCCAGGATCCCATTGA+TGG - chr1_4:65989659-65989678 Msa0178670:intron 50.0%
TCCTCCAGGATCCCATTGAT+GGG - chr1_4:65989660-65989679 Msa0178670:intron 50.0%
! TCACTTGCAATGGGCTTGTC+CGG + chr1_4:65989688-65989707 None:intergenic 50.0%
GGAGGAACATGGAAGTGGAA+AGG + chr1_4:65989864-65989883 None:intergenic 50.0%
CTGCTCCAATGACCTTGAGA+TGG - chr1_4:65989997-65990016 Msa0178670:intron 50.0%
! TGTTTTGTGCCTGACCCACT+AGG - chr1_4:65990268-65990287 Msa0178670:intron 50.0%
TTGGGTTATGAAAAGGGGGG+TGG + chr1_4:65990373-65990392 None:intergenic 50.0%
! CCCCCCTTTTCATAACCCAA+TGG - chr1_4:65990373-65990392 Msa0178670:intron 50.0%
CGTTTCAACGTCGCTTCAGT+TGG + chr1_4:65990558-65990577 None:intergenic 50.0%
CTTTCCCTTCCTCCTTGGAT+CGG - chr1_4:65990703-65990722 Msa0178670:intron 50.0%
TTTCCCTTCCTCCTTGGATC+GGG - chr1_4:65990704-65990723 Msa0178670:intron 50.0%
GCATCTGAAGACGACCAATC+CGG - chr1_4:65990741-65990760 Msa0178670:intron 50.0%
TGACTAGAGTCTAGCGACTC+TGG - chr1_4:65990807-65990826 Msa0178670:intron 50.0%
! GGTGGTGGTGATTGTGATGA+AGG - chr1_4:65990828-65990847 Msa0178670:intron 50.0%
GGTGGTGATTGTGATGAAGG+CGG - chr1_4:65990831-65990850 Msa0178670:intron 50.0%
GATTGTGATGAAGGCGGATC+TGG - chr1_4:65990837-65990856 Msa0178670:intron 50.0%
AACGAGGTGAGAAGGAGAGA+AGG + chr1_4:65990896-65990915 None:intergenic 50.0%
TGAGACACAACGAGGTGAGA+AGG + chr1_4:65990904-65990923 None:intergenic 50.0%
TGCAGGTCACAATGAATCGG+TGG + chr1_4:65990958-65990977 None:intergenic 50.0%
GCATCGAACAACCACTAGAG+CGG + chr1_4:65991034-65991053 None:intergenic 50.0%
! GGATCGCTGCTTAGTTTGAG+CGG + chr1_4:65991056-65991075 None:intergenic 50.0%
GATATGCTCGAGTCTGCAGA+AGG + chr1_4:65991167-65991186 None:intergenic 50.0%
CAGACTCGAGCATATCCCAT+AGG - chr1_4:65991171-65991190 Msa0178670:intron 50.0%
TCGAGCATATCCCATAGGTC+TGG - chr1_4:65991176-65991195 Msa0178670:intron 50.0%
CGAGCATATCCCATAGGTCT+GGG - chr1_4:65991177-65991196 Msa0178670:intron 50.0%
ATGGCAATCAGAATGCGACG+TGG + chr1_4:65991238-65991257 None:intergenic 50.0%
GAGGAGAAGCTTCCAATTGG+TGG + chr1_4:65991274-65991293 None:intergenic 50.0%
GCTCTCTAACTCCTAGAGGT+TGG + chr1_4:65989067-65989086 None:intergenic 50.0%
CTAGGCTCTCTAACTCCTAG+AGG + chr1_4:65989071-65989090 None:intergenic 50.0%
!! TGGGTATTTTGGGTGTGGGT+TGG + chr1_4:65991687-65991706 None:intergenic 50.0%
!! GGCATTGGGTATTTTGGGTG+TGG + chr1_4:65991692-65991711 None:intergenic 50.0%
!!! GGGTGGGCATTGGGTATTTT+GGG + chr1_4:65991697-65991716 None:intergenic 50.0%
!!! AGGGTGGGCATTGGGTATTT+TGG + chr1_4:65991698-65991717 None:intergenic 50.0%
AGAGGAAAAGGGTGGGCATT+GGG + chr1_4:65991706-65991725 None:intergenic 50.0%
CAAGACAGAGTTGAGAGCAG+GGG + chr1_4:65991883-65991902 None:intergenic 50.0%
TCTCCGATGACCGTAGAACT+TGG - chr1_4:65992280-65992299 Msa0178670:intron 50.0%
ATCACACTGGTGACCTTGGA+TGG - chr1_4:65992598-65992617 Msa0178670:intron 50.0%
GGCACTTATTCAGTTGGTCC+TGG - chr1_4:65992663-65992682 Msa0178670:intron 50.0%
! GAATGCTTTTCATGCCGCTC+AGG - chr1_4:65992902-65992921 Msa0178670:intron 50.0%
TGCAGAACTCCAGAAAGGGT+CGG + chr1_4:65992949-65992968 None:intergenic 50.0%
ATGGGACAATCCTCCGAAGA+TGG - chr1_4:65993114-65993133 Msa0178670:CDS 50.0%
AAGAGAGGTTCCATCTTCGG+AGG + chr1_4:65993127-65993146 None:intergenic 50.0%
!! AGCTTTTTAGCCTGAGGACC+TGG + chr1_4:65993361-65993380 None:intergenic 50.0%
!! GCCTCAAGCTTTTTAGCCTG+AGG + chr1_4:65993367-65993386 None:intergenic 50.0%
GATTGCGCAGCTTCCTACAA+TGG + chr1_4:65993472-65993491 None:intergenic 50.0%
GTTGAGAGTTGGAATGGGGA+AGG - chr1_4:65993609-65993628 Msa0178670:five_prime_UTR 50.0%
CTCATCTGTACGATTCGAGC+AGG - chr1_4:65993782-65993801 Msa0178670:five_prime_UTR 50.0%
!! TTCCGGCGATTCGGGCTTTT+GGG - chr1_4:65986719-65986738 Msa0178670:CDS 55.0%
TTCCCAAAAGCCCGAATCGC+CGG + chr1_4:65986724-65986743 None:intergenic 55.0%
! AGGGTATTAAAGGGGGGTGG+AGG - chr1_4:65988065-65988084 Msa0178670:intron 55.0%
GGGTATTAAAGGGGGGTGGA+GGG - chr1_4:65988066-65988085 Msa0178670:intron 55.0%
TGCTTATAGGGGATGGGGCA+GGG - chr1_4:65988121-65988140 Msa0178670:intron 55.0%
GGGTCAGCGTCACGATTCAA+GGG - chr1_4:65988684-65988703 Msa0178670:intron 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG + chr1_4:65989089-65989108 None:intergenic 55.0%
TCCCATCAATGGGATCCTGG+AGG + chr1_4:65989664-65989683 None:intergenic 55.0%
AGGATCCCATTGATGGGAGC+CGG - chr1_4:65989666-65989685 Msa0178670:intron 55.0%
CTTGTCCGGCTCCCATCAAT+GGG + chr1_4:65989674-65989693 None:intergenic 55.0%
GAGCAGGAGGAACATGGAAG+TGG + chr1_4:65989869-65989888 None:intergenic 55.0%
CAACGTCGCTTCAGTTGGGA+AGG + chr1_4:65990553-65990572 None:intergenic 55.0%
! GCAAGTGTGTTGCTCGTCGT+CGG - chr1_4:65990591-65990610 Msa0178670:intron 55.0%
GCGGTCGAACCATTGCAAGT+TGG - chr1_4:65990616-65990635 Msa0178670:intron 55.0%
!! GCAAGTTGGTTGATGCCAGG+CGG - chr1_4:65990630-65990649 Msa0178670:intron 55.0%
ACATACCACCGCCGCTGAAA+TGG + chr1_4:65990662-65990681 None:intergenic 55.0%
TGGCTCTTTCCCTTCCTCCT+TGG - chr1_4:65990698-65990717 Msa0178670:intron 55.0%
TTCCCTTCCTCCTTGGATCG+GGG - chr1_4:65990705-65990724 Msa0178670:intron 55.0%
TCTGAAGACGACCAATCCGG+TGG - chr1_4:65990744-65990763 Msa0178670:intron 55.0%
AGACGACCAATCCGGTGGTT+TGG - chr1_4:65990749-65990768 Msa0178670:intron 55.0%
GACGACCAATCCGGTGGTTT+GGG - chr1_4:65990750-65990769 Msa0178670:intron 55.0%
CTCCGTTGGAGATCTGTCAC+AGG - chr1_4:65990783-65990802 Msa0178670:intron 55.0%
CTAGAGTCTAGCGACTCTGG+TGG - chr1_4:65990810-65990829 Msa0178670:intron 55.0%
GCAGCAACTGAGACACAACG+AGG + chr1_4:65990912-65990931 None:intergenic 55.0%
TCCTGATGTGACCGCTCTAG+TGG - chr1_4:65991020-65991039 Msa0178670:intron 55.0%
ACCACTAGAGCGGTCACATC+AGG + chr1_4:65991024-65991043 None:intergenic 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG + chr1_4:65989089-65989108 None:intergenic 55.0%
CAGAGGAAAAGGGTGGGCAT+TGG + chr1_4:65991707-65991726 None:intergenic 55.0%
!! AGAACTGTGCAGAGGCGTTG+TGG - chr1_4:65992127-65992146 Msa0178670:intron 55.0%
CAGGGATGTGTTGCACGCAT+CGG + chr1_4:65992851-65992870 None:intergenic 55.0%
CACATTGAGCCGACCCTTTC+TGG - chr1_4:65992937-65992956 Msa0178670:intron 55.0%
ACATCACCCCACTGTGAGCA+CGG + chr1_4:65993325-65993344 None:intergenic 55.0%
GTGCGGTCCAGTCATCAAGA+AGG + chr1_4:65993402-65993421 None:intergenic 55.0%
!! CTGGCACTGATTCGTCTGTG+CGG + chr1_4:65993419-65993438 None:intergenic 55.0%
!! GTTCCGGCGATTCGGGCTTT+TGG - chr1_4:65986718-65986737 Msa0178670:CDS 60.0%
GGGGTCACAAATAGGGGGAG+AGG - chr1_4:65988013-65988032 Msa0178670:intron 60.0%
GTGCTTATAGGGGATGGGGC+AGG - chr1_4:65988120-65988139 Msa0178670:intron 60.0%
GAACAGGCAAAGGGGTCCAG+GGG + chr1_4:65988158-65988177 None:intergenic 60.0%
GGAACAGGCAAAGGGGTCCA+GGG + chr1_4:65988159-65988178 None:intergenic 60.0%
AGGAACAGGCAAAGGGGTCC+AGG + chr1_4:65988160-65988179 None:intergenic 60.0%
GGGGTCAGCGTCACGATTCA+AGG - chr1_4:65988683-65988702 Msa0178670:intron 60.0%
GGCTCCCATCAATGGGATCC+TGG + chr1_4:65989667-65989686 None:intergenic 60.0%
GCTTGTCCGGCTCCCATCAA+TGG + chr1_4:65989675-65989694 None:intergenic 60.0%
! GTGTTGCTCGTCGTCGGTAG+CGG - chr1_4:65990597-65990616 Msa0178670:intron 60.0%
! TGGTTGATGCCAGGCGGTTC+CGG - chr1_4:65990636-65990655 Msa0178670:intron 60.0%
AAGAGACAGGCCCCGATCCA+AGG + chr1_4:65990718-65990737 None:intergenic 60.0%
! GACCAATCCGGTGGTTTGGG+TGG - chr1_4:65990753-65990772 Msa0178670:intron 60.0%
! CAATCCGGTGGTTTGGGTGG+CGG - chr1_4:65990756-65990775 Msa0178670:intron 60.0%
AGAACCGCCACCCAAACCAC+CGG + chr1_4:65990763-65990782 None:intergenic 60.0%
GAGTCTAGCGACTCTGGTGG+TGG - chr1_4:65990813-65990832 Msa0178670:intron 60.0%
GAAGGCGGATCTGGTGTCTC+CGG - chr1_4:65990846-65990865 Msa0178670:intron 60.0%
GATCTGGTGTCTCCGGTGGA+GGG - chr1_4:65990853-65990872 Msa0178670:intron 60.0%
TGAACGAATGAGCGGCGCAG+TGG + chr1_4:65992077-65992096 None:intergenic 60.0%
ACTGCGCCGCTCATTCGTTC+AGG - chr1_4:65992076-65992095 Msa0178670:intron 60.0%
ATGCCGCTCAGGTTCACCGT+GGG - chr1_4:65992913-65992932 Msa0178670:intron 60.0%
TGACCCACGGTGAACCTGAG+CGG + chr1_4:65992919-65992938 None:intergenic 60.0%
! GGTCGGCTCAATGTGACCCA+CGG + chr1_4:65992932-65992951 None:intergenic 60.0%
CGAGGCTAATAACCCCGTGC+TGG - chr1_4:65993207-65993226 Msa0178670:CDS 60.0%
GGTGGATCCGTGCTCACAGT+GGG - chr1_4:65993315-65993334 Msa0178670:CDS 60.0%
GTGGATCCGTGCTCACAGTG+GGG - chr1_4:65993316-65993335 Msa0178670:CDS 60.0%
CAGGGCTCAATTGCCTCCCC+TGG - chr1_4:65988139-65988158 Msa0178670:intron 65.0%
CTGAAATGGCCGGAACCGCC+TGG + chr1_4:65990648-65990667 None:intergenic 65.0%
GGCGGTTCCGGCCATTTCAG+CGG - chr1_4:65990648-65990667 Msa0178670:intron 65.0%
GGTTCCGGCCATTTCAGCGG+CGG - chr1_4:65990651-65990670 Msa0178670:intron 65.0%
ACCACCGCCGCTGAAATGGC+CGG + chr1_4:65990658-65990677 None:intergenic 65.0%
GGCCCCGATCCAAGGAGGAA+GGG + chr1_4:65990710-65990729 None:intergenic 65.0%
AGGCCCCGATCCAAGGAGGA+AGG + chr1_4:65990711-65990730 None:intergenic 65.0%
AGACAGGCCCCGATCCAAGG+AGG + chr1_4:65990715-65990734 None:intergenic 65.0%
CGCCACCCAAACCACCGGAT+TGG + chr1_4:65990758-65990777 None:intergenic 65.0%
! TGGGTGGCGGTTCTCTCCGT+TGG - chr1_4:65990769-65990788 Msa0178670:intron 65.0%
GGATCTGGTGTCTCCGGTGG+AGG - chr1_4:65990852-65990871 Msa0178670:intron 65.0%
! CTCCGGTGGAGGGTGCAGAT+CGG - chr1_4:65990863-65990882 Msa0178670:intron 65.0%
! TCCGGTGGAGGGTGCAGATC+GGG - chr1_4:65990864-65990883 Msa0178670:intron 65.0%
TCCCGATCTGCACCCTCCAC+CGG + chr1_4:65990868-65990887 None:intergenic 65.0%
GCTCGAGTCTGCAGAAGGCG+AGG + chr1_4:65991162-65991181 None:intergenic 65.0%
!! CTGTGCAGAGGCGTTGTGGC+TGG - chr1_4:65992131-65992150 Msa0178670:intron 65.0%
CATGCCGCTCAGGTTCACCG+TGG - chr1_4:65992912-65992931 Msa0178670:intron 65.0%
CTCGGTTGCGACCACCACGT+TGG + chr1_4:65993255-65993274 None:intergenic 65.0%
GTCGCAACCGAGCTGCACCA+GGG - chr1_4:65993263-65993282 Msa0178670:CDS 65.0%
TCGCAACCGAGCTGCACCAG+GGG - chr1_4:65993264-65993283 Msa0178670:CDS 65.0%
ACCATGCCCCTGGTGCAGCT+CGG + chr1_4:65993273-65993292 None:intergenic 65.0%
GGGTGGATCCGTGCTCACAG+TGG - chr1_4:65993314-65993333 Msa0178670:CDS 65.0%
CAGGCAAAGGGGTCCAGGGG+AGG + chr1_4:65988155-65988174 None:intergenic 70.0%
TCCGGCCATTTCAGCGGCGG+TGG - chr1_4:65990654-65990673 Msa0178670:intron 70.0%
GGCGGATCTGGTGTCTCCGG+TGG - chr1_4:65990849-65990868 Msa0178670:intron 70.0%
GGTCGCAACCGAGCTGCACC+AGG - chr1_4:65993262-65993281 Msa0178670:CDS 70.0%
ACCGAGCTGCACCAGGGGCA+TGG - chr1_4:65993269-65993288 Msa0178670:CDS 70.0%
! GCACCAGGGGCATGGTGCTC+CGG - chr1_4:65993277-65993296 Msa0178670:CDS 70.0%
! CAGGGGCATGGTGCTCCGGT+CGG - chr1_4:65993281-65993300 Msa0178670:CDS 70.0%
CTCCGGTCGGAGGAGCTGGT+GGG - chr1_4:65993294-65993313 Msa0178670:CDS 70.0%
CACCCACCAGCTCCTCCGAC+CGG + chr1_4:65993299-65993318 None:intergenic 70.0%
! CGACCGGAGCACCATGCCCC+TGG + chr1_4:65993283-65993302 None:intergenic 75.0%
GGGCATGGTGCTCCGGTCGG+AGG - chr1_4:65993284-65993303 Msa0178670:CDS 75.0%
GGTGCTCCGGTCGGAGGAGC+TGG - chr1_4:65993290-65993309 Msa0178670:CDS 75.0%
GCTCCGGTCGGAGGAGCTGG+TGG - chr1_4:65993293-65993312 Msa0178670:CDS 75.0%
CGGTCGGAGGAGCTGGTGGG+TGG - chr1_4:65993297-65993316 Msa0178670:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 65986005 65993896 65986005 ID=Msa0178670;Name=Msa0178670
chr1_4 mRNA 65986005 65993896 65986005 ID=Msa0178670-mRNA-1;Parent=Msa0178670;Name=Msa0178670-mRNA-1;_AED=0.04;_eAED=0.04;_QI=413|1|1|1|1|1|4|455|397
chr1_4 exon 65986005 65986977 65986005 ID=Msa0178670-mRNA-1:exon:21549;Parent=Msa0178670-mRNA-1
chr1_4 exon 65987067 65987182 65987067 ID=Msa0178670-mRNA-1:exon:21548;Parent=Msa0178670-mRNA-1
chr1_4 exon 65987276 65987351 65987276 ID=Msa0178670-mRNA-1:exon:21547;Parent=Msa0178670-mRNA-1
chr1_4 exon 65993000 65993896 65993000 ID=Msa0178670-mRNA-1:exon:21546;Parent=Msa0178670-mRNA-1
chr1_4 five_prime_UTR 65993484 65993896 65993484 ID=Msa0178670-mRNA-1:five_prime_utr;Parent=Msa0178670-mRNA-1
chr1_4 CDS 65993000 65993483 65993000 ID=Msa0178670-mRNA-1:cds;Parent=Msa0178670-mRNA-1
chr1_4 CDS 65987276 65987351 65987276 ID=Msa0178670-mRNA-1:cds;Parent=Msa0178670-mRNA-1
chr1_4 CDS 65987067 65987182 65987067 ID=Msa0178670-mRNA-1:cds;Parent=Msa0178670-mRNA-1
chr1_4 CDS 65986460 65986977 65986460 ID=Msa0178670-mRNA-1:cds;Parent=Msa0178670-mRNA-1
chr1_4 three_prime_UTR 65986005 65986459 65986005 ID=Msa0178670-mRNA-1:three_prime_utr;Parent=Msa0178670-mRNA-1
Gene Sequence

>Msa0178670

ATGGGAGCTGAAAAAAAATGGCTTTTCACGCTATTCAGTGCAGCAGTTTTATCTCTAATGCTTTTGTTAATGTCTTCTTTTTCAACTTTCAGTTCTCAAAAGCCTTTTCCATCACTTGTTCAACATGGTTCTCATTACCCTCCTGCTTTTGCATACTTTATCTCTGGTGGACATGGTGATAAAGACCGGATCTTTCGTTTGTTGTTGGCTGTTTATCATCCGAGGAACCGTTATTTGCTTCATCTTGGTATGGATGCTAGGAATGAAGAGAGACAGGGGTTGGCTGATGCCGTTAGTTCTGTTCCGGCGATTCGGGCTTTTGGGAATGTTGATGTGGTTGGTAAGGCTGATTGGATCACTTATTTGGGTTCTTCCAATGTTGCTATTACGCTACGTGCTGCTGCTATTATGCTTAAATTGGATAGTGGATGGAATTGGTTTATCACTTTGAGTGCTCGTGATTATCCTCTCATTACACAGGATGATCTATCACATGTTTTCTCCTCCGTGAATAGAGACCTCAATTTCATTGATCACACTGGTGACCTTGGATGGAAAGAGAGTGACAGATTCAAGCCTATTGTAGTTGATCCAGGAACATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCTACAGAGAAGAGAGCAACACCTGATGCATTCAAACTCTTCACTGGTTCACCGTGGGTCACATTGAGCCGACCCTTTCTGGAGTTCTGCATTTTCGGTTGGGATAATTTACCACGAACGCTACTAATGTATTTTACAAATGTTAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAATGCACCCGAATTTAAGAACACAACAGTGAATGGTGACTTACGATACATGATATGGGACAATCCTCCGAAGATGGAACCTCTCTTCCTTAATACATCTGTTTATGATATGATGGCAGAAAGTGGAGCAGCATTTGCAAGACAGTTCGAGGCTAATAACCCCGTGCTGGATATGATTGACAAAAAAATTCTCCAACGTGGTGGTCGCAACCGAGCTGCACCAGGGGCATGGTGCTCCGGTCGGAGGAGCTGGTGGGTGGATCCGTGCTCACAGTGGGGTGATGTCAATATTCTTAAGCCAGGTCCTCAGGCTAAAAAGCTTGAGGCATCTGTTTCTAGCCTTCTTGATGACTGGACCGCACAGACGAATCAGTGCCAGTGA

Protein sequence

>Msa0178670

MGAEKKWLFTLFSAAVLSLMLLLMSSFSTFSSQKPFPSLVQHGSHYPPAFAYFISGGHGDKDRIFRLLLAVYHPRNRYLLHLGMDARNEERQGLADAVSSVPAIRAFGNVDVVGKADWITYLGSSNVAITLRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSVNRDLNFIDHTGDLGWKESDRFKPIVVDPGTYLARRSQIFQATEKRATPDAFKLFTGSPWVTLSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPLFLNTSVYDMMAESGAAFARQFEANNPVLDMIDKKILQRGGRNRAAPGAWCSGRRSWWVDPCSQWGDVNILKPGPQAKKLEASVSSLLDDWTAQTNQCQ*