AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0178620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178620 MtrunA17_Chr1g0208381 99.496 397 2 0 1 397 1 397 0.0 822
Msa0178620 MtrunA17_Chr6g0452631 45.985 411 203 2 4 396 23 432 3.46e-133 389
Msa0178620 MtrunA17_Chr4g0010141 50.286 350 173 1 48 397 71 419 3.80e-131 383
Msa0178620 MtrunA17_Chr4g0022501 51.289 349 167 2 48 396 87 432 4.19e-129 378
Msa0178620 MtrunA17_Chr2g0317441 44.235 425 202 5 1 397 7 424 6.20e-119 352
Msa0178620 MtrunA17_Chr1g0169461 47.863 351 177 4 47 396 93 438 4.37e-116 345
Msa0178620 MtrunA17_Chr6g0460801 45.251 358 185 4 46 397 52 404 2.82e-109 327
Msa0178620 MtrunA17_Chr7g0254121 42.579 411 203 6 5 397 4 399 8.24e-107 320
Msa0178620 MtrunA17_Chr4g0063621 45.429 350 156 3 48 396 73 388 5.79e-103 310
Msa0178620 MtrunA17_Chr4g0002191 43.836 365 200 4 35 397 46 407 5.20e-97 295
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178620 AT1G71070.1 70.277 397 116 2 1 397 1 395 0.0 581
Msa0178620 AT5G39990.1 49.735 378 188 2 20 397 72 447 4.68e-130 381
Msa0178620 AT4G27480.2 44.917 423 200 5 2 397 5 421 1.16e-127 374
Msa0178620 AT4G27480.3 44.917 423 200 5 2 397 5 421 1.16e-127 374
Msa0178620 AT4G27480.1 44.917 423 200 5 2 397 5 421 1.16e-127 374
Msa0178620 AT3G15350.2 44.131 426 204 6 1 397 4 424 7.46e-124 365
Msa0178620 AT3G15350.1 44.131 426 204 6 1 397 4 424 7.46e-124 365
Msa0178620 AT1G03520.1 44.226 407 201 4 3 385 32 436 1.71e-123 365
Msa0178620 AT4G03340.1 44.498 418 204 4 4 396 33 447 9.60e-123 363
Msa0178620 AT5G15050.1 45.324 417 204 3 4 397 19 434 1.18e-122 362
Msa0178620 AT1G03520.2 49.558 339 169 1 47 385 11 347 3.32e-122 358
Msa0178620 AT1G53100.1 43.415 410 207 4 4 396 21 422 3.59e-116 345
Msa0178620 AT1G53100.2 43.970 398 198 4 4 384 21 410 1.34e-113 338
Msa0178620 AT4G03340.2 42.584 418 189 5 4 396 33 424 3.52e-111 332
Msa0178620 AT3G24040.1 47.293 351 182 3 47 396 66 414 3.31e-110 330
Msa0178620 AT3G03690.1 48.949 333 160 4 22 346 23 353 9.30e-108 322
Msa0178620 AT2G37585.1 46.286 350 166 3 48 397 57 384 1.60e-104 314
Msa0178620 AT3G03690.2 46.626 163 81 3 28 186 29 189 8.63e-41 144

Find 151 sgRNAs with CRISPR-Local

Find 666 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATTGAGCCGACCCTTTC+TGG 0.089306 1_4:-65954546 Msa0178620:CDS
ACAATTCTGGTGCAAAATTT+TGG 0.121049 1_4:-65961288 Msa0178620:five_prime_UTR
GGCTGATTGGATCACTTATT+TGG 0.148700 1_4:-65960720 Msa0178620:CDS
TTTGAAACTATTTGCGTTAA+TGG 0.174285 1_4:+65961155 None:intergenic
CTTGGGGTGCTGTATTATTT+TGG 0.177742 1_4:-65953832 Msa0178620:three_prime_UTR
GTTCCGGCGATTCGGGCTTT+TGG 0.200421 1_4:-65960764 Msa0178620:CDS
CACTGTTGTGTTCTTAAATT+CGG 0.206760 1_4:+65954415 None:intergenic
TGCTGCTATTATGCTTAAAT+TGG 0.269491 1_4:-65960666 Msa0178620:CDS
GTGACTTACGATACATGATA+TGG 0.304470 1_4:-65954388 Msa0178620:CDS
TTTGGGTTAGATTGGTTGTT+GGG 0.307169 1_4:+65961397 None:intergenic
TATCATAAACAGATGTATTA+AGG 0.314288 1_4:+65954336 None:intergenic
TAGTTCTGTTCCGGCGATTC+GGG 0.329890 1_4:-65960771 Msa0178620:CDS
TACTAAGAATCAAACAATTC+TGG 0.332293 1_4:-65961301 Msa0178620:five_prime_UTR
CCGGATCTTTCGTTTGTTGT+TGG 0.334358 1_4:-65960879 Msa0178620:CDS
AAGTGGGTTTGGTTAAAGTT+TGG 0.336576 1_4:+65961130 None:intergenic
GGTGCTCCGGTCGGAGGAGC+TGG 0.338394 1_4:-65954193 Msa0178620:CDS
CTCCTTGCTAAATATGTTCC+TGG 0.348702 1_4:+65954733 None:intergenic
TTGAAACTATTTGCGTTAAT+GGG 0.349369 1_4:+65961156 None:intergenic
GAGGTTTGTTAAAGAGGTCT+AGG 0.350070 1_4:+65961367 None:intergenic
TTAGTTCTGTTCCGGCGATT+CGG 0.352834 1_4:-65960772 Msa0178620:CDS
ACTTGATTCAAAGGCATCAT+TGG 0.360660 1_4:+65953784 None:intergenic
TAATGGGTCGTTGAAGATCT+TGG 0.369877 1_4:+65961172 None:intergenic
GCTGATTGGATCACTTATTT+GGG 0.376046 1_4:-65960719 Msa0178620:CDS
AATTGGATAGTGGATGGAAT+TGG 0.377417 1_4:-65960649 Msa0178620:CDS
TTACAGAAGAAGATGGAGAT+TGG 0.385821 1_4:+65961424 None:intergenic
GGTGGATCCGTGCTCACAGT+GGG 0.387141 1_4:-65954168 Msa0178620:CDS
TTTCTAGCCTTCTTGATGAC+TGG 0.393670 1_4:-65954091 Msa0178620:CDS
CCACGTAGTGAAATCAGTTA+TGG 0.401503 1_4:-65961083 Msa0178620:exon
AACCGTTATTTGCTTCATCT+TGG 0.403853 1_4:-65960839 Msa0178620:CDS
GAAAGTGAGGTTTGTTAAAG+AGG 0.407851 1_4:+65961361 None:intergenic
GCCAAAAGGAAAAGATTGAT+TGG 0.411773 1_4:+65953626 None:intergenic
AGGAAGAGAGGTTCCATCTT+CGG 0.416614 1_4:+65954356 None:intergenic
TGATGCCGTTAGTTCTGTTC+CGG 0.420966 1_4:-65960780 Msa0178620:CDS
GCACCAGGGGCATGGTGCTC+CGG 0.424727 1_4:-65954206 Msa0178620:CDS
GTTCCTGGATCAACTACAAT+AGG 0.433364 1_4:+65954748 None:intergenic
GGTCGCAACCGAGCTGCACC+AGG 0.434471 1_4:-65954221 Msa0178620:CDS
TACATCTGTTTATGATATGA+TGG 0.435748 1_4:-65954330 Msa0178620:CDS
TTATTTGCTTCATCTTGGTA+TGG 0.441251 1_4:-65960834 Msa0178620:CDS
GCTCCGGTCGGAGGAGCTGG+TGG 0.444083 1_4:-65954190 Msa0178620:CDS
ATGTGGTTGGTAAGGCTGAT+TGG 0.444577 1_4:-65960733 Msa0178620:CDS
TGCTAGGAATGAAGAGAGAC+AGG 0.450149 1_4:-65960810 Msa0178620:CDS
GTGAAGAGTTTGAATGCATC+AGG 0.457700 1_4:+65954673 None:intergenic
CACGTAGTGAAATCAGTTAT+GGG 0.469998 1_4:-65961082 Msa0178620:exon
TTTGCATACTTTATCTCTGG+TGG 0.471087 1_4:-65960917 Msa0178620:CDS
ACCGAGCTGCACCAGGGGCA+TGG 0.472640 1_4:-65954214 Msa0178620:CDS
ATTATGCTTAAATTGGATAG+TGG 0.472769 1_4:-65960659 Msa0178620:CDS
TATTCTTAAGCCAGGTCCTC+AGG 0.473164 1_4:-65954135 Msa0178620:CDS
GATTCTTAGTAATTGAATGT+TGG 0.475652 1_4:+65961313 None:intergenic
ACTGTTGTGTTCTTAAATTC+GGG 0.476266 1_4:+65954416 None:intergenic
AAGCCTATTGTAGTTGATCC+AGG 0.482669 1_4:-65954751 Msa0178620:CDS
AAATAAATGGCAAATTCTAC+TGG 0.482837 1_4:+65953976 None:intergenic
TTTGGGAATGTTGATGTGGT+TGG 0.485305 1_4:-65960746 Msa0178620:CDS
TTTAAGAACACAACAGTGAA+TGG 0.486202 1_4:-65954410 Msa0178620:CDS
CGGTCGGAGGAGCTGGTGGG+TGG 0.486707 1_4:-65954186 Msa0178620:CDS
AGCATTTGCAAGACAGTTCG+AGG 0.489978 1_4:-65954294 Msa0178620:CDS
CAAAAGTTGAGAGTTGGAAT+GGG 0.490180 1_4:-65953879 Msa0178620:three_prime_UTR
AGGTTTGTTAAAGAGGTCTA+GGG 0.490998 1_4:+65961368 None:intergenic
GGAAAAGATTGATTGGAGAA+TGG 0.492471 1_4:+65953633 None:intergenic
CTAAGAATAGAAACCATTGT+AGG 0.492565 1_4:-65954027 Msa0178620:three_prime_UTR
AAATACATTAGTAGCGTTCG+TGG 0.493054 1_4:+65954494 None:intergenic
TTCCCAAAAGCCCGAATCGC+CGG 0.495215 1_4:+65960761 None:intergenic
TGGGTTAGATTGGTTGTTGG+GGG 0.496329 1_4:+65961399 None:intergenic
AAGAAACAAAAGTTGAGAGT+TGG 0.496931 1_4:-65953885 Msa0178620:three_prime_UTR
TTGGGTTAGATTGGTTGTTG+GGG 0.497056 1_4:+65961398 None:intergenic
CGACCGGAGCACCATGCCCC+TGG 0.498967 1_4:+65954203 None:intergenic
TGCTTAAATTGGATAGTGGA+TGG 0.498971 1_4:-65960655 Msa0178620:CDS
TCATGATTGATATTACACTT+TGG 0.499202 1_4:+65953927 None:intergenic
GGGCATGGTGCTCCGGTCGG+AGG 0.500093 1_4:-65954199 Msa0178620:CDS
TATCCTCCCACTTGATTCAA+AGG 0.502341 1_4:+65953775 None:intergenic
TTTCATACTCTTTCCATCCA+AGG 0.504506 1_4:+65954872 None:intergenic
CACCCACCAGCTCCTCCGAC+CGG 0.504628 1_4:+65954187 None:intergenic
TACTTTATCTCTGGTGGACA+TGG 0.505546 1_4:-65960911 Msa0178620:CDS
GAATGTTGATGTGGTTGGTA+AGG 0.506190 1_4:-65960741 Msa0178620:CDS
ACAAAAGTTGAGAGTTGGAA+TGG 0.508077 1_4:-65953880 Msa0178620:three_prime_UTR
TTCATCTTGGTATGGATGCT+AGG 0.515475 1_4:-65960826 Msa0178620:CDS
GAAATTGAGGTCTCTATTCA+CGG 0.518088 1_4:+65954912 None:intergenic
ATGGGACAATCCTCCGAAGA+TGG 0.518158 1_4:-65954369 Msa0178620:CDS
ATTGATCACACTGGTGACCT+TGG 0.518359 1_4:-65954889 Msa0178620:CDS
GAGATAAAGTATGCAAAAGC+AGG 0.520795 1_4:+65960923 None:intergenic
ATCACACTGGTGACCTTGGA+TGG 0.525330 1_4:-65954885 Msa0178620:CDS
GATTGCGCAGCTTCCTACAA+TGG 0.529964 1_4:+65954014 None:intergenic
CAGGGGCATGGTGCTCCGGT+CGG 0.531153 1_4:-65954202 Msa0178620:CDS
CTCATCTGTACGATTCGAGC+AGG 0.531916 1_4:-65953701 Msa0178620:three_prime_UTR
CAGTGTGATCAATGAAATTG+AGG 0.531923 1_4:+65954899 None:intergenic
TGATTCAAAGGCATCATTGG+AGG 0.532887 1_4:+65953787 None:intergenic
CTCCGGTCGGAGGAGCTGGT+GGG 0.534852 1_4:-65954189 Msa0178620:CDS
TTGTCAATCATATCCAGCAC+GGG 0.536748 1_4:+65954263 None:intergenic
TATAACAAACAAGTGCCAAA+AGG 0.540050 1_4:+65953612 None:intergenic
GATGCATTCAAACTCTTCAC+TGG 0.546398 1_4:-65954670 Msa0178620:intron
TACCAAGATGAAGCAAATAA+CGG 0.548707 1_4:+65960837 None:intergenic
GTTGAGAGTTGGAATGGGGA+AGG 0.549437 1_4:-65953874 Msa0178620:three_prime_UTR
ACCATGCCCCTGGTGCAGCT+CGG 0.549540 1_4:+65954213 None:intergenic
TAATATCAATCATGAGAGGT+GGG 0.554273 1_4:-65953919 Msa0178620:three_prime_UTR
TGTTGAACAAGTGATGGAAA+AGG 0.556082 1_4:+65960962 None:intergenic
AATGTTAAGTTATCTCAAGA+AGG 0.558147 1_4:-65954467 Msa0178620:CDS
CGAGGCTAATAACCCCGTGC+TGG 0.558930 1_4:-65954276 Msa0178620:CDS
AAAATGCAGAACTCCAGAAA+GGG 0.561090 1_4:+65954533 None:intergenic
GTGGACATGGTGATAAAGAC+CGG 0.566551 1_4:-65960898 Msa0178620:CDS
AGTGTCTATGATGTGATCAC+TGG 0.566934 1_4:+65954048 None:intergenic
TTTGTCAATCATATCCAGCA+CGG 0.567860 1_4:+65954262 None:intergenic
TGACTTACGATACATGATAT+GGG 0.569521 1_4:-65954387 Msa0178620:CDS
AATGATGCCTTTGAATCAAG+TGG 0.570435 1_4:-65953782 Msa0178620:three_prime_UTR
AAGATGGAGATTGGAGATCA+CGG 0.572549 1_4:+65961433 None:intergenic
AAAGGTAAATTAGGAAAGTG+AGG 0.574143 1_4:+65961348 None:intergenic
ATCCAGGAACATATTTAGCA+AGG 0.575334 1_4:-65954735 Msa0178620:CDS
TGAAGCAAATAACGGTTCCT+CGG 0.576471 1_4:+65960845 None:intergenic
TTTCCATCACTTGTTCAACA+TGG 0.579342 1_4:-65960959 Msa0178620:CDS
GAAAATGCAGAACTCCAGAA+AGG 0.579663 1_4:+65954532 None:intergenic
TGTTGGCTGTTTATCATCCG+AGG 0.580159 1_4:-65960862 Msa0178620:CDS
CCAACAACAAACGAAAGATC+CGG 0.581010 1_4:+65960879 None:intergenic
ACATCACCCCACTGTGAGCA+CGG 0.583640 1_4:+65954161 None:intergenic
GAATGAAGAGAGACAGGGGT+TGG 0.584461 1_4:-65960804 Msa0178620:CDS
TTGAGAGTTGGAATGGGGAA+GGG 0.587800 1_4:-65953873 Msa0178620:three_prime_UTR
GAACCATGTTGAACAAGTGA+TGG 0.589262 1_4:+65960956 None:intergenic
CTCAATTTCATTGATCACAC+TGG 0.590299 1_4:-65954898 Msa0178620:CDS
TCGCAACCGAGCTGCACCAG+GGG 0.595118 1_4:-65954219 Msa0178620:CDS
ATGCCGCTCAGGTTCACCGT+GGG 0.596264 1_4:-65954570 Msa0178620:intron
GATGTCAATATTCTTAAGCC+AGG 0.596661 1_4:-65954143 Msa0178620:CDS
GGGTGGATCCGTGCTCACAG+TGG 0.597115 1_4:-65954169 Msa0178620:CDS
ATAAAGTATGCAAAAGCAGG+AGG 0.597845 1_4:+65960926 None:intergenic
GTAATATCAATCATGAGAGG+TGG 0.603226 1_4:-65953920 Msa0178620:three_prime_UTR
TATCCTCTCATTACACAGGA+TGG 0.606449 1_4:-65960602 Msa0178620:intron
TATGATATGATGGCAGAAAG+TGG 0.609069 1_4:-65954320 Msa0178620:CDS
CAAAATAATACAGCACCCCA+AGG 0.609144 1_4:+65953833 None:intergenic
TTATGAAAGTGAAAAGCAAG+AGG 0.618474 1_4:+65953746 None:intergenic
AAAAGTTGAGAGTTGGAATG+GGG 0.620441 1_4:-65953878 Msa0178620:three_prime_UTR
AAGAGAGGTTCCATCTTCGG+AGG 0.624722 1_4:+65954359 None:intergenic
GTCGCAACCGAGCTGCACCA+GGG 0.627823 1_4:-65954220 Msa0178620:CDS
TGATTATCCTCTCATTACAC+AGG 0.628279 1_4:-65960606 Msa0178620:CDS
ACAGATGTATTAAGGAAGAG+AGG 0.635101 1_4:+65954344 None:intergenic
TGCAGAACTCCAGAAAGGGT+CGG 0.636858 1_4:+65954537 None:intergenic
CATGCCGCTCAGGTTCACCG+TGG 0.638945 1_4:-65954571 Msa0178620:intron
ATGATGCCTTTGAATCAAGT+GGG 0.640825 1_4:-65953781 Msa0178620:three_prime_UTR
ACGTAGCGTAATAGCAACAT+TGG 0.642510 1_4:+65960691 None:intergenic
GTGCGGTCCAGTCATCAAGA+AGG 0.646737 1_4:+65954084 None:intergenic
ATACCATCCTGTGTAATGAG+AGG 0.650846 1_4:+65960599 None:intergenic
AGTGTAATATCAATCATGAG+AGG 0.654897 1_4:-65953923 Msa0178620:three_prime_UTR
GGTCGGCTCAATGTGACCCA+CGG 0.654966 1_4:+65954554 None:intergenic
CTGGCACTGATTCGTCTGTG+CGG 0.656378 1_4:+65954067 None:intergenic
TAAAGTATGCAAAAGCAGGA+GGG 0.657855 1_4:+65960927 None:intergenic
AATATCAATCATGAGAGGTG+GGG 0.659618 1_4:-65953918 Msa0178620:three_prime_UTR
CTCGGTTGCGACCACCACGT+TGG 0.661759 1_4:+65954231 None:intergenic
CATAACTGATTTCACTACGT+GGG 0.665220 1_4:+65961084 None:intergenic
CCATAACTGATTTCACTACG+TGG 0.665557 1_4:+65961083 None:intergenic
GCTAGGAATGAAGAGAGACA+GGG 0.666500 1_4:-65960809 Msa0178620:CDS
AATCGCCGGAACAGAACTAA+CGG 0.673091 1_4:+65960775 None:intergenic
ATGCCTTTGAATCAAGTGGG+AGG 0.683405 1_4:-65953778 Msa0178620:three_prime_UTR
GTGGATCCGTGCTCACAGTG+GGG 0.704097 1_4:-65954167 Msa0178620:CDS
TGTCAATCATATCCAGCACG+GGG 0.714463 1_4:+65954264 None:intergenic
CTAGGAATGAAGAGAGACAG+GGG 0.714775 1_4:-65960808 Msa0178620:CDS
ATTGAGGTCTCTATTCACGG+AGG 0.783848 1_4:+65954915 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTTTTT+TGG - chr1_4:65959071-65959090 Msa0178620:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTTT+GGG - chr1_4:65959072-65959091 Msa0178620:intron 0.0%
!! ACAAAAAAAGTAATATTTCA+AGG + chr1_4:65955182-65955201 None:intergenic 15.0%
!!! GATTTTTTTTCTTTCTAATT+TGG - chr1_4:65955382-65955401 Msa0178620:intron 15.0%
!! AAAACAATAAATTCTTTCAA+TGG + chr1_4:65955802-65955821 None:intergenic 15.0%
!! GTATAATTAGATTAGTATTT+CGG + chr1_4:65956061-65956080 None:intergenic 15.0%
!! ATTTAAAGAGAAAATATAGT+GGG + chr1_4:65956465-65956484 None:intergenic 15.0%
!! AATTTAAAGAGAAAATATAG+TGG + chr1_4:65956466-65956485 None:intergenic 15.0%
!! TTTAAATTGTGAAAACATTA+AGG - chr1_4:65956478-65956497 Msa0178620:intron 15.0%
!! AAATACAAATGATAATTCTA+TGG - chr1_4:65956562-65956581 Msa0178620:intron 15.0%
!! AAATACAAATGATAATTCTA+TGG - chr1_4:65956562-65956581 Msa0178620:intron 15.0%
!! AATAAAAACATAAATAATCC+AGG + chr1_4:65960287-65960306 None:intergenic 15.0%
!!! TGTTTTTCTTTCAAAATAAA+TGG + chr1_4:65961126-65961145 None:intergenic 15.0%
!! AAAACGGTGAATAAAATAAA+AGG + chr1_4:65954953-65954972 None:intergenic 20.0%
!!! ATTTGAAATGCAGTATTAAT+TGG - chr1_4:65955000-65955019 Msa0178620:intron 20.0%
!!! ATTACTTTTTTTGTGATGAA+AGG - chr1_4:65955188-65955207 Msa0178620:intron 20.0%
!! TACTATTATAGTCTAAATCA+TGG + chr1_4:65955444-65955463 None:intergenic 20.0%
!!! TAATAGTATTGAGTTTGTAT+AGG - chr1_4:65955456-65955475 Msa0178620:intron 20.0%
!! TCTTAAAAATATATATTCCG+AGG - chr1_4:65955824-65955843 Msa0178620:intron 20.0%
!! ATGAGATATTCAACTATTTA+AGG + chr1_4:65955941-65955960 None:intergenic 20.0%
!! AATCTTTATTCGACTTTATA+AGG + chr1_4:65956141-65956160 None:intergenic 20.0%
!! TTATCTATAATGTAGATCTT+TGG - chr1_4:65956348-65956367 Msa0178620:intron 20.0%
!! AATGATAATTCTATGGTATT+TGG - chr1_4:65956569-65956588 Msa0178620:intron 20.0%
!! ATGATAATTCTATGGTATTT+GGG - chr1_4:65956570-65956589 Msa0178620:intron 20.0%
!! GAGATTATTGCATAATAATA+AGG - chr1_4:65956592-65956611 Msa0178620:intron 20.0%
!! TATTATAAATAAAGATGCAG+AGG + chr1_4:65956746-65956765 None:intergenic 20.0%
!!! ATTTTTCAATTAGATCAAAC+AGG + chr1_4:65957630-65957649 None:intergenic 20.0%
!!! TCTATGTTTTATGCTATTTT+TGG - chr1_4:65957791-65957810 Msa0178620:intron 20.0%
!!! AAGTTATTTTTTGTTTGGTA+TGG + chr1_4:65958061-65958080 None:intergenic 20.0%
!! ATACCAAACAAAAAATAACT+TGG - chr1_4:65958060-65958079 Msa0178620:intron 20.0%
!! TACCAAACAAAAAATAACTT+GGG - chr1_4:65958061-65958080 Msa0178620:intron 20.0%
!! AATGATAATTCTATGGTATT+TGG - chr1_4:65956569-65956588 Msa0178620:intron 20.0%
!! ATGATAATTCTATGGTATTT+GGG - chr1_4:65956570-65956589 Msa0178620:intron 20.0%
!! GAGATTATTGCATAATAATA+AGG - chr1_4:65956592-65956611 Msa0178620:intron 20.0%
!! TATTATAAATAAAGATGCAG+AGG + chr1_4:65956746-65956765 None:intergenic 20.0%
!! GGAAAAAAATTGTTAGATAT+AGG + chr1_4:65959465-65959484 None:intergenic 20.0%
!!! TGTTTTATAATTTATGTGTG+AGG - chr1_4:65959965-65959984 Msa0178620:intron 20.0%
!! AATAGAAAAAATCATAGTCA+GGG + chr1_4:65960472-65960491 None:intergenic 20.0%
!! AAATAGAAAAAATCATAGTC+AGG + chr1_4:65960473-65960492 None:intergenic 20.0%
!! TATCATAAACAGATGTATTA+AGG + chr1_4:65960753-65960772 None:intergenic 20.0%
!! TTTTTGTGGAAAGGTAAATT+AGG + chr1_4:65953750-65953769 None:intergenic 25.0%
!!! TTGAATGTTGGAATTTTTTG+TGG + chr1_4:65953764-65953783 None:intergenic 25.0%
! GATTCTTAGTAATTGAATGT+TGG + chr1_4:65953776-65953795 None:intergenic 25.0%
! TACTAAGAATCAAACAATTC+TGG - chr1_4:65953785-65953804 Msa0178620:three_prime_UTR 25.0%
!!! AATTTTGGAAATTTCTGATC+TGG - chr1_4:65953813-65953832 Msa0178620:three_prime_UTR 25.0%
!!! ATTTTGGAAATTTCTGATCT+GGG - chr1_4:65953814-65953833 Msa0178620:three_prime_UTR 25.0%
! TTGAAACTATTTGCGTTAAT+GGG + chr1_4:65953933-65953952 None:intergenic 25.0%
!! TTTGAAACTATTTGCGTTAA+TGG + chr1_4:65953934-65953953 None:intergenic 25.0%
!!! AAGTTTAGATTTTGAGAAGT+GGG + chr1_4:65953975-65953994 None:intergenic 25.0%
!!! AAAGTTTAGATTTTGAGAAG+TGG + chr1_4:65953976-65953995 None:intergenic 25.0%
! ATTATGCTTAAATTGGATAG+TGG - chr1_4:65954427-65954446 Msa0178620:CDS 25.0%
! AACATCCACAATCAAATAAA+AGG + chr1_4:65954553-65954572 None:intergenic 25.0%
! AACATCCACAATCAAATAAA+CGG + chr1_4:65954553-65954572 None:intergenic 25.0%
!!! AGTTTTCATCATTTTTCGAT+AGG - chr1_4:65955231-65955250 Msa0178620:intron 25.0%
! AAGTATAAACCTTATACTTC+CGG + chr1_4:65955274-65955293 None:intergenic 25.0%
!! AAAAAAATCAAAGTACCATG+TGG + chr1_4:65955371-65955390 None:intergenic 25.0%
!! TTTCTAATTTGGTCTTTCAA+AGG - chr1_4:65955393-65955412 Msa0178620:intron 25.0%
!! AAAGGAATTTTACAGTTTAC+TGG - chr1_4:65955411-65955430 Msa0178620:intron 25.0%
! AAAGTCAAGAATTAGTTAAG+AGG - chr1_4:65955556-65955575 Msa0178620:intron 25.0%
! AAGTCAAGAATTAGTTAAGA+GGG - chr1_4:65955557-65955576 Msa0178620:intron 25.0%
! CTCATGTAGTTATAATTGTT+AGG - chr1_4:65955956-65955975 Msa0178620:intron 25.0%
! TATCTAACAAAAATCAACAG+AGG + chr1_4:65956525-65956544 None:intergenic 25.0%
!!! TGTTGATTTTTGTTAGATAC+TGG - chr1_4:65956526-65956545 Msa0178620:intron 25.0%
!! ATTTTATAACTTATGCCCTT+AGG - chr1_4:65956855-65956874 Msa0178620:intron 25.0%
! ATGTGAAATACATTAGTTGT+CGG + chr1_4:65957359-65957378 None:intergenic 25.0%
! TAATATTGAGATCTCTTCAA+TGG + chr1_4:65957421-65957440 None:intergenic 25.0%
! ATCTCAATATTAAGAGTAGA+TGG - chr1_4:65957429-65957448 Msa0178620:intron 25.0%
! ATAAAGATGCTATTGATGAA+GGG + chr1_4:65957696-65957715 None:intergenic 25.0%
!! AAACCTTTTCAAACAATCAT+CGG + chr1_4:65957736-65957755 None:intergenic 25.0%
!!! TTTATGCTATTTTTGGAATC+TGG - chr1_4:65957798-65957817 Msa0178620:intron 25.0%
! ACAAAACAATTCTAGTAAGT+GGG + chr1_4:65957859-65957878 None:intergenic 25.0%
! TCAATTTAATGATAGCCATT+GGG + chr1_4:65957994-65958013 None:intergenic 25.0%
! TTCAATTTAATGATAGCCAT+TGG + chr1_4:65957995-65958014 None:intergenic 25.0%
!!! TATTTTTTGTTTGGTATGGA+AGG + chr1_4:65958057-65958076 None:intergenic 25.0%
!! TGGTATCTCTTTTAATCTAA+TGG + chr1_4:65958093-65958112 None:intergenic 25.0%
! ATAAAACTATGAAGAGTCAA+AGG + chr1_4:65958705-65958724 None:intergenic 25.0%
!! ATTTTATAACTTATGCCCTT+AGG - chr1_4:65956855-65956874 Msa0178620:intron 25.0%
! AGAAAGGAAAATAAATGGAA+GGG + chr1_4:65959627-65959646 None:intergenic 25.0%
! AATATAGATACCAAGTTCTA+CGG + chr1_4:65959896-65959915 None:intergenic 25.0%
! AATGTTAAGTTATCTCAAGA+AGG - chr1_4:65960619-65960638 Msa0178620:CDS 25.0%
! TACATCTGTTTATGATATGA+TGG - chr1_4:65960756-65960775 Msa0178620:CDS 25.0%
! AAATAAATGGCAAATTCTAC+TGG + chr1_4:65961113-65961132 None:intergenic 25.0%
! TGAAAGAAAAACACATTCTT+TGG - chr1_4:65961133-65961152 Msa0178620:five_prime_UTR 25.0%
! TCATGATTGATATTACACTT+TGG + chr1_4:65961162-65961181 None:intergenic 25.0%
!!! GGTTTTTTTTTGGGTTAGAT+TGG + chr1_4:65953700-65953719 None:intergenic 30.0%
AAAGGTAAATTAGGAAAGTG+AGG + chr1_4:65953741-65953760 None:intergenic 30.0%
!!! TGTTGGAATTTTTTGTGGAA+AGG + chr1_4:65953759-65953778 None:intergenic 30.0%
! ACAATTCTGGTGCAAAATTT+TGG - chr1_4:65953798-65953817 Msa0178620:three_prime_UTR 30.0%
TTATGGGAGCTGAAAAAAAA+TGG - chr1_4:65954020-65954039 Msa0178620:three_prime_UTR 30.0%
TACCAAGATGAAGCAAATAA+CGG + chr1_4:65954252-65954271 None:intergenic 30.0%
TTATTTGCTTCATCTTGGTA+TGG - chr1_4:65954252-65954271 Msa0178620:CDS 30.0%
TGCTGCTATTATGCTTAAAT+TGG - chr1_4:65954420-65954439 Msa0178620:CDS 30.0%
!! TTGTGCCTTTTATTTGATTG+TGG - chr1_4:65954545-65954564 Msa0178620:CDS 30.0%
TTTCCTAAATCAATCAAACC+TGG + chr1_4:65954981-65955000 None:intergenic 30.0%
GGGAAATGATTTCTTATCAT+TGG - chr1_4:65955092-65955111 Msa0178620:intron 30.0%
! CATAGATGCCTTTTCTTTTT+AGG - chr1_4:65955155-65955174 Msa0178620:intron 30.0%
TTCAAGGACCTAAAAAGAAA+AGG + chr1_4:65955166-65955185 None:intergenic 30.0%
!!! GGCTTTTTTAATTTGAGATC+CGG - chr1_4:65955252-65955271 Msa0178620:intron 30.0%
GTTATAACCTGAAGACATTT+CGG + chr1_4:65955308-65955327 None:intergenic 30.0%
! ATGTCTTCAGGTTATAACAT+TGG - chr1_4:65955310-65955329 Msa0178620:intron 30.0%
! TTCAGGTTATAACATTGGAT+TGG - chr1_4:65955315-65955334 Msa0178620:intron 30.0%
TAATTCGTTGTCCATACATA+AGG - chr1_4:65955509-65955528 Msa0178620:intron 30.0%
TACCAAACATTCCTTATGTA+TGG + chr1_4:65955523-65955542 None:intergenic 30.0%
TAATTCTTGACTTTACTTCC+TGG + chr1_4:65955550-65955569 None:intergenic 30.0%
AGTCAAGAATTAGTTAAGAG+GGG - chr1_4:65955558-65955577 Msa0178620:intron 30.0%
ATAGAGATAGAGATAGTAGA+AGG - chr1_4:65955649-65955668 Msa0178620:intron 30.0%
TAGAGATAGAGATAGTAGAA+GGG - chr1_4:65955650-65955669 Msa0178620:intron 30.0%
!! AGATAGTAGAAGGGTATTAA+AGG - chr1_4:65955659-65955678 Msa0178620:intron 30.0%
!! GATAGTAGAAGGGTATTAAA+GGG - chr1_4:65955660-65955679 Msa0178620:intron 30.0%
!! ATAGTAGAAGGGTATTAAAG+GGG - chr1_4:65955661-65955680 Msa0178620:intron 30.0%
! TCAGATAAGGCATTTATAGA+AGG - chr1_4:65955701-65955720 Msa0178620:intron 30.0%
! CAGATAAGGCATTTATAGAA+GGG - chr1_4:65955702-65955721 Msa0178620:intron 30.0%
!! ATTTATAGAAGGGTGCTTAT+AGG - chr1_4:65955712-65955731 Msa0178620:intron 30.0%
!! TTTATAGAAGGGTGCTTATA+GGG - chr1_4:65955713-65955732 Msa0178620:intron 30.0%
AGTTTGATGAATCTATACCT+CGG + chr1_4:65955844-65955863 None:intergenic 30.0%
ATTTCGGTTTCTCAATTCAT+AGG + chr1_4:65956045-65956064 None:intergenic 30.0%
TACAAATCTAAGAAGACTGA+AGG - chr1_4:65956078-65956097 Msa0178620:intron 30.0%
ATAAGAAAGTAACTGCAGAA+AGG - chr1_4:65956642-65956661 Msa0178620:intron 30.0%
! ACATTGGGTATTTTGTATGT+GGG + chr1_4:65956713-65956732 None:intergenic 30.0%
AATAAAGATGCAGAGGAAAA+GGG + chr1_4:65956739-65956758 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG + chr1_4:65956740-65956759 None:intergenic 30.0%
TTGTTCATGTTCAATTGCTT+GGG + chr1_4:65957108-65957127 None:intergenic 30.0%
ATTGTTCATGTTCAATTGCT+TGG + chr1_4:65957109-65957128 None:intergenic 30.0%
!! TTTTGGGGAATTCATTTATC+AGG + chr1_4:65957205-65957224 None:intergenic 30.0%
TAATGTATTTCACATGCCAA+GGG - chr1_4:65957364-65957383 Msa0178620:intron 30.0%
!! GCTTTGATTGATGATGTATT+AGG + chr1_4:65957390-65957409 None:intergenic 30.0%
! TAATTCTTTTTATGAGCAGG+AGG + chr1_4:65957485-65957504 None:intergenic 30.0%
AGTTACTAAGTACAACAAAG+TGG + chr1_4:65957535-65957554 None:intergenic 30.0%
GATAAGTTTATCCAAGTGAA+AGG + chr1_4:65957564-65957583 None:intergenic 30.0%
ACTTATCAGCAATCAGATAT+AGG - chr1_4:65957577-65957596 Msa0178620:intron 30.0%
TAAAGATGCTATTGATGAAG+GGG + chr1_4:65957695-65957714 None:intergenic 30.0%
CATAAAGATGCTATTGATGA+AGG + chr1_4:65957697-65957716 None:intergenic 30.0%
AATAGCATCTTTATGACTGA+AGG - chr1_4:65957702-65957721 Msa0178620:intron 30.0%
AACCTCTAAATTACAACCAT+AGG - chr1_4:65957764-65957783 Msa0178620:intron 30.0%
ACCTCTAAATTACAACCATA+GGG - chr1_4:65957765-65957784 Msa0178620:intron 30.0%
ATAAAACATAGACAACCCTA+TGG + chr1_4:65957783-65957802 None:intergenic 30.0%
CACAAAACAATTCTAGTAAG+TGG + chr1_4:65957860-65957879 None:intergenic 30.0%
GATCTAACAATAAACCTAGT+GGG + chr1_4:65957888-65957907 None:intergenic 30.0%
AGAAAAACAGTGGAACAAAT+TGG + chr1_4:65957926-65957945 None:intergenic 30.0%
!! TATGGAAGGTATTAGAAATG+TGG + chr1_4:65958043-65958062 None:intergenic 30.0%
!!! GACCCAAGTTATTTTTTGTT+TGG + chr1_4:65958066-65958085 None:intergenic 30.0%
ATGTGCTGAGTATTAATTGT+TGG - chr1_4:65958281-65958300 Msa0178620:intron 30.0%
TTTCTCTGTGATCCAAATAT+TGG - chr1_4:65958931-65958950 Msa0178620:intron 30.0%
!! AATTCCTACTTTTGATGGAA+AGG + chr1_4:65959002-65959021 None:intergenic 30.0%
!! AGACTAATTCCTACTTTTGA+TGG + chr1_4:65959007-65959026 None:intergenic 30.0%
ATAAGAAAGTAACTGCAGAA+AGG - chr1_4:65956642-65956661 Msa0178620:intron 30.0%
AATAAAGATGCAGAGGAAAA+GGG + chr1_4:65956739-65956758 None:intergenic 30.0%
AAATAAAGATGCAGAGGAAA+AGG + chr1_4:65956740-65956759 None:intergenic 30.0%
! TATTTTGTGAAATGAGTGAG+TGG + chr1_4:65959560-65959579 None:intergenic 30.0%
AAATAAATGGAAGGGAACAA+AGG + chr1_4:65959619-65959638 None:intergenic 30.0%
GAGAAAGGAAAATAAATGGA+AGG + chr1_4:65959628-65959647 None:intergenic 30.0%
ATTAGGCTGATGAAAATATG+TGG + chr1_4:65959784-65959803 None:intergenic 30.0%
!! TATTTATCTGCTTTGGTTCT+TGG - chr1_4:65959819-65959838 Msa0178620:intron 30.0%
GAAGAGACATGAGATATATA+AGG + chr1_4:65960047-65960066 None:intergenic 30.0%
ACAATCATTAGAAAGGTCTT+AGG + chr1_4:65960104-65960123 None:intergenic 30.0%
TATGAGCACAATCATTAGAA+AGG + chr1_4:65960111-65960130 None:intergenic 30.0%
! TTTTATTCAATTGCACATGC+AGG - chr1_4:65960300-65960319 Msa0178620:intron 30.0%
ACTGTTGTGTTCTTAAATTC+GGG + chr1_4:65960673-65960692 None:intergenic 30.0%
CACTGTTGTGTTCTTAAATT+CGG + chr1_4:65960674-65960693 None:intergenic 30.0%
TTTAAGAACACAACAGTGAA+TGG - chr1_4:65960676-65960695 Msa0178620:CDS 30.0%
TGACTTACGATACATGATAT+GGG - chr1_4:65960699-65960718 Msa0178620:CDS 30.0%
CTAAGAATAGAAACCATTGT+AGG - chr1_4:65961059-65961078 Msa0178620:CDS 30.0%
AGTGTAATATCAATCATGAG+AGG - chr1_4:65961163-65961182 Msa0178620:five_prime_UTR 30.0%
TAATATCAATCATGAGAGGT+GGG - chr1_4:65961167-65961186 Msa0178620:five_prime_UTR 30.0%
AAGAAACAAAAGTTGAGAGT+TGG - chr1_4:65961201-65961220 Msa0178620:five_prime_UTR 30.0%
!! TTTTGGAGGCTTGATATTTA+TGG - chr1_4:65961271-65961290 Msa0178620:five_prime_UTR 30.0%
TTATGAAAGTGAAAAGCAAG+AGG + chr1_4:65961343-65961362 None:intergenic 30.0%
!! GATAGCTAGCTTATTCTTTT+TGG - chr1_4:65961407-65961426 Msa0178620:five_prime_UTR 30.0%
! TCCAATCAATCTTTTCCTTT+TGG - chr1_4:65961459-65961478 Msa0178620:five_prime_UTR 30.0%
TATAACAAACAAGTGCCAAA+AGG + chr1_4:65961477-65961496 None:intergenic 30.0%
TTACAGAAGAAGATGGAGAT+TGG + chr1_4:65953665-65953684 None:intergenic 35.0%
! TTTGGGTTAGATTGGTTGTT+GGG + chr1_4:65953692-65953711 None:intergenic 35.0%
!!! TTTTGGGTTAGATTGGTTGT+TGG + chr1_4:65953693-65953712 None:intergenic 35.0%
!!! GAGGTCTAGGGTTTTTTTTT+GGG + chr1_4:65953709-65953728 None:intergenic 35.0%
!!! AGAGGTCTAGGGTTTTTTTT+TGG + chr1_4:65953710-65953729 None:intergenic 35.0%
!! AGGTTTGTTAAAGAGGTCTA+GGG + chr1_4:65953721-65953740 None:intergenic 35.0%
!! GAAAGTGAGGTTTGTTAAAG+AGG + chr1_4:65953728-65953747 None:intergenic 35.0%
! AAGTGGGTTTGGTTAAAGTT+TGG + chr1_4:65953959-65953978 None:intergenic 35.0%
!! TAGATTTTGAGAAGTGGGTT+TGG + chr1_4:65953970-65953989 None:intergenic 35.0%
! CATAACTGATTTCACTACGT+GGG + chr1_4:65954005-65954024 None:intergenic 35.0%
CACGTAGTGAAATCAGTTAT+GGG - chr1_4:65954004-65954023 Msa0178620:three_prime_UTR 35.0%
! TGTTGAACAAGTGATGGAAA+AGG + chr1_4:65954127-65954146 None:intergenic 35.0%
TTTCCATCACTTGTTCAACA+TGG - chr1_4:65954127-65954146 Msa0178620:CDS 35.0%
TAAAGTATGCAAAAGCAGGA+GGG + chr1_4:65954162-65954181 None:intergenic 35.0%
ATAAAGTATGCAAAAGCAGG+AGG + chr1_4:65954163-65954182 None:intergenic 35.0%
GAGATAAAGTATGCAAAAGC+AGG + chr1_4:65954166-65954185 None:intergenic 35.0%
! GCTTTTGCATACTTTATCTC+TGG - chr1_4:65954166-65954185 Msa0178620:CDS 35.0%
TTTGCATACTTTATCTCTGG+TGG - chr1_4:65954169-65954188 Msa0178620:CDS 35.0%
AACCGTTATTTGCTTCATCT+TGG - chr1_4:65954247-65954266 Msa0178620:CDS 35.0%
GCTGATTGGATCACTTATTT+GGG - chr1_4:65954367-65954386 Msa0178620:CDS 35.0%
!! TGCTTAAATTGGATAGTGGA+TGG - chr1_4:65954431-65954450 Msa0178620:CDS 35.0%
!! AATTGGATAGTGGATGGAAT+TGG - chr1_4:65954437-65954456 Msa0178620:CDS 35.0%
TGATTATCCTCTCATTACAC+AGG - chr1_4:65954480-65954499 Msa0178620:CDS 35.0%
! ACAGGATGGTATGCAAATTT+TGG - chr1_4:65954498-65954517 Msa0178620:CDS 35.0%
!! GTGTTTTAAACTAACGAGCT+TGG - chr1_4:65954623-65954642 Msa0178620:intron 35.0%
TATTGAGATTGTTCTGTGTG+TGG - chr1_4:65954654-65954673 Msa0178620:intron 35.0%
GAAACAAAACTCCTAAACAG+TGG + chr1_4:65954708-65954727 None:intergenic 35.0%
!! TTGTGCCGTTTATTTGATTG+TGG - chr1_4:65954751-65954770 Msa0178620:CDS 35.0%
!! GTGTTTTAAACTAACGAGCT+TGG - chr1_4:65954623-65954642 Msa0178620:intron 35.0%
GAAACAAAACTCCTAAACAG+TGG + chr1_4:65954708-65954727 None:intergenic 35.0%
ATCAAACCTGGTCATGAAAA+CGG + chr1_4:65954969-65954988 None:intergenic 35.0%
! TGACCAGGTTTGATTGATTT+AGG - chr1_4:65954975-65954994 Msa0178620:intron 35.0%
TAATGCAGAACATGCAACTT+TGG + chr1_4:65955070-65955089 None:intergenic 35.0%
AGTTGCATGTTCTGCATTAT+AGG - chr1_4:65955071-65955090 Msa0178620:intron 35.0%
GTTGCATGTTCTGCATTATA+GGG - chr1_4:65955072-65955091 Msa0178620:intron 35.0%
! ATTTGAGATCCGGAAGTATA+AGG - chr1_4:65955262-65955281 Msa0178620:intron 35.0%
AATGATACCGAAATGTCTTC+AGG - chr1_4:65955298-65955317 Msa0178620:intron 35.0%
!! TAACATTGGATTGGTTGCAA+CGG - chr1_4:65955324-65955343 Msa0178620:intron 35.0%
TGAGTTTGTATAGGACACTA+AGG - chr1_4:65955465-65955484 Msa0178620:intron 35.0%
GTCCATACATAAGGAATGTT+TGG - chr1_4:65955518-65955537 Msa0178620:intron 35.0%
TTAAGAGGGGTCTATGAAAA+GGG - chr1_4:65955571-65955590 Msa0178620:intron 35.0%
GGTCTATGAAAAGGGTAAAA+AGG - chr1_4:65955579-65955598 Msa0178620:intron 35.0%
! AAAAGGTGTACAGTTGAAAC+AGG - chr1_4:65955596-65955615 Msa0178620:intron 35.0%
! AAAGGTGTACAGTTGAAACA+GGG - chr1_4:65955597-65955616 Msa0178620:intron 35.0%
!! TAGTAGAAGGGTATTAAAGG+GGG - chr1_4:65955662-65955681 Msa0178620:intron 35.0%
!! TTATAGAAGGGTGCTTATAG+GGG - chr1_4:65955714-65955733 Msa0178620:intron 35.0%
AAACTACCTCTATATGCTGA+GGG - chr1_4:65955859-65955878 Msa0178620:intron 35.0%
GAAACTTTCTGTGAAGAGAT+TGG - chr1_4:65955890-65955909 Msa0178620:intron 35.0%
ATGCAATCAGAAGAAACTCT+TGG + chr1_4:65955995-65956014 None:intergenic 35.0%
AATCTAAGAAGACTGAAGGA+TGG - chr1_4:65956082-65956101 Msa0178620:intron 35.0%
!! TTCTAGTTGCAGGGATTTTT+AGG - chr1_4:65956112-65956131 Msa0178620:intron 35.0%
GATTCCAGTGCTAAATTAGT+AGG - chr1_4:65956157-65956176 Msa0178620:intron 35.0%
ACTACCTACTAATTTAGCAC+TGG + chr1_4:65956164-65956183 None:intergenic 35.0%
AGTAGGTAGTCTAACTGATA+TGG - chr1_4:65956174-65956193 Msa0178620:intron 35.0%
AGTTATCGCAAAAGATAGAG+TGG - chr1_4:65956257-65956276 Msa0178620:intron 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG + chr1_4:65956703-65956722 None:intergenic 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG + chr1_4:65956704-65956723 None:intergenic 35.0%
! GACATTGGGTATTTTGTATG+TGG + chr1_4:65956714-65956733 None:intergenic 35.0%
GTTAGATATAGGACTCCTAA+GGG + chr1_4:65956873-65956892 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG + chr1_4:65956874-65956893 None:intergenic 35.0%
TTATGTTATCCTTCACCTTG+AGG + chr1_4:65956925-65956944 None:intergenic 35.0%
! GTCACTCTACTTCAAGTTAT+GGG + chr1_4:65956962-65956981 None:intergenic 35.0%
! TGTCACTCTACTTCAAGTTA+TGG + chr1_4:65956963-65956982 None:intergenic 35.0%
! ACAGCACAATGAGAGTTTTT+GGG + chr1_4:65957221-65957240 None:intergenic 35.0%
! TACAGCACAATGAGAGTTTT+TGG + chr1_4:65957222-65957241 None:intergenic 35.0%
AATTCCACTCCCATTGTAAT+TGG - chr1_4:65957326-65957345 Msa0178620:intron 35.0%
CTAATGTATTTCACATGCCA+AGG - chr1_4:65957363-65957382 Msa0178620:intron 35.0%
TATTGAGATCTCTTCAATGG+TGG + chr1_4:65957418-65957437 None:intergenic 35.0%
! GCGTAATTCTTTTTATGAGC+AGG + chr1_4:65957488-65957507 None:intergenic 35.0%
TTTATCCAAGTGAAAGGTGA+AGG + chr1_4:65957558-65957577 None:intergenic 35.0%
TCACCGATGATTGTTTGAAA+AGG - chr1_4:65957730-65957749 Msa0178620:intron 35.0%
ACCCTATGGTTGTAATTTAG+AGG + chr1_4:65957769-65957788 None:intergenic 35.0%
AGTGGGTGAGAGAAATTAAA+AGG + chr1_4:65957842-65957861 None:intergenic 35.0%
GGATCTAACAATAAACCTAG+TGG + chr1_4:65957889-65957908 None:intergenic 35.0%
! AAATTGGTCAGGTTGTATGT+TGG + chr1_4:65957910-65957929 None:intergenic 35.0%
AGTAGATGATACAAACCAGA+AGG + chr1_4:65957949-65957968 None:intergenic 35.0%
TAGCCATTGGGTTATGAAAA+GGG + chr1_4:65957982-65958001 None:intergenic 35.0%
ATAGCCATTGGGTTATGAAA+AGG + chr1_4:65957983-65958002 None:intergenic 35.0%
AGGAATAGAGTTACTAGGTT+CGG + chr1_4:65958018-65958037 None:intergenic 35.0%
! AAGGTATTAGAAATGTGGAC+AGG + chr1_4:65958038-65958057 None:intergenic 35.0%
GATAACAGGGTCAATTGTTA+AGG + chr1_4:65958117-65958136 None:intergenic 35.0%
GTGAGATCAAAAGGATAACA+GGG + chr1_4:65958130-65958149 None:intergenic 35.0%
TGTGAGATCAAAAGGATAAC+AGG + chr1_4:65958131-65958150 None:intergenic 35.0%
AAACTATGAAGAGTCAAAGG+AGG + chr1_4:65958702-65958721 None:intergenic 35.0%
ACGTGGAAGATATTTGAAAG+AGG + chr1_4:65958824-65958843 None:intergenic 35.0%
TTGGATCACAGAGAAAATGA+AGG + chr1_4:65958927-65958946 None:intergenic 35.0%
!! GGTACTTTGAAGCCAATATT+TGG + chr1_4:65958946-65958965 None:intergenic 35.0%
!!! CTTCAAAGTACCGTTTTAAC+TGG - chr1_4:65958954-65958973 Msa0178620:intron 35.0%
ATGGAAAGGAAGATGTCTAT+TGG + chr1_4:65958988-65959007 None:intergenic 35.0%
TCTTCCTTTCCATCAAAAGT+AGG - chr1_4:65958995-65959014 Msa0178620:intron 35.0%
! ATTAGTCTCTCCAACATCAT+TGG - chr1_4:65959019-65959038 Msa0178620:intron 35.0%
CATAGAAGTTCTGCAGATAA+CGG - chr1_4:65956786-65956805 Msa0178620:intron 35.0%
GTTAGATATAGGACTCCTAA+GGG + chr1_4:65956873-65956892 None:intergenic 35.0%
TGTTAGATATAGGACTCCTA+AGG + chr1_4:65956874-65956893 None:intergenic 35.0%
GGAGGAGAAAGGAAAATAAA+TGG + chr1_4:65959632-65959651 None:intergenic 35.0%
GGCAACATATTTATCTGCTT+TGG - chr1_4:65959812-65959831 Msa0178620:intron 35.0%
AATGCTTTGTGCTTAGTATG+AGG + chr1_4:65959857-65959876 None:intergenic 35.0%
TCATACTAAGCACAAAGCAT+TGG - chr1_4:65959856-65959875 Msa0178620:intron 35.0%
GAAATTGAGGTCTCTATTCA+CGG + chr1_4:65960177-65960196 None:intergenic 35.0%
CAGTGTGATCAATGAAATTG+AGG + chr1_4:65960190-65960209 None:intergenic 35.0%
CTCAATTTCATTGATCACAC+TGG - chr1_4:65960188-65960207 Msa0178620:intron 35.0%
TTTCATACTCTTTCCATCCA+AGG + chr1_4:65960217-65960236 None:intergenic 35.0%
TGAATCATACCTCTACTTTG+TGG - chr1_4:65960245-65960264 Msa0178620:intron 35.0%
ATCCAGGAACATATTTAGCA+AGG - chr1_4:65960351-65960370 Msa0178620:intron 35.0%
AAAATGCAGAACTCCAGAAA+GGG + chr1_4:65960556-65960575 None:intergenic 35.0%
!!! TTTCTGGAGTTCTGCATTTT+CGG - chr1_4:65960556-65960575 Msa0178620:intron 35.0%
AAATACATTAGTAGCGTTCG+TGG + chr1_4:65960595-65960614 None:intergenic 35.0%
GTGACTTACGATACATGATA+TGG - chr1_4:65960698-65960717 Msa0178620:CDS 35.0%
ACAGATGTATTAAGGAAGAG+AGG + chr1_4:65960745-65960764 None:intergenic 35.0%
TATGATATGATGGCAGAAAG+TGG - chr1_4:65960766-65960785 Msa0178620:CDS 35.0%
TTTGTCAATCATATCCAGCA+CGG + chr1_4:65960827-65960846 None:intergenic 35.0%
GACAAAAAAATTCTCCAACG+TGG - chr1_4:65960841-65960860 Msa0178620:CDS 35.0%
AAAAAAATTCTCCAACGTGG+TGG - chr1_4:65960844-65960863 Msa0178620:CDS 35.0%
GATGTCAATATTCTTAAGCC+AGG - chr1_4:65960943-65960962 Msa0178620:CDS 35.0%
GTAATATCAATCATGAGAGG+TGG - chr1_4:65961166-65961185 Msa0178620:five_prime_UTR 35.0%
AATATCAATCATGAGAGGTG+GGG - chr1_4:65961168-65961187 Msa0178620:five_prime_UTR 35.0%
ACAAAAGTTGAGAGTTGGAA+TGG - chr1_4:65961206-65961225 Msa0178620:five_prime_UTR 35.0%
CAAAAGTTGAGAGTTGGAAT+GGG - chr1_4:65961207-65961226 Msa0178620:five_prime_UTR 35.0%
AAAAGTTGAGAGTTGGAATG+GGG - chr1_4:65961208-65961227 Msa0178620:five_prime_UTR 35.0%
!! AAATGCATTTTGATGAGCCT+TGG - chr1_4:65961236-65961255 Msa0178620:five_prime_UTR 35.0%
!! AATGCATTTTGATGAGCCTT+GGG - chr1_4:65961237-65961256 Msa0178620:five_prime_UTR 35.0%
!! ACTTGATTCAAAGGCATCAT+TGG + chr1_4:65961305-65961324 None:intergenic 35.0%
AATGATGCCTTTGAATCAAG+TGG - chr1_4:65961304-65961323 Msa0178620:five_prime_UTR 35.0%
ATGATGCCTTTGAATCAAGT+GGG - chr1_4:65961305-65961324 Msa0178620:five_prime_UTR 35.0%
GGAAAAGATTGATTGGAGAA+TGG + chr1_4:65961456-65961475 None:intergenic 35.0%
GCCAAAAGGAAAAGATTGAT+TGG + chr1_4:65961463-65961482 None:intergenic 35.0%
AAGATGGAGATTGGAGATCA+CGG + chr1_4:65953656-65953675 None:intergenic 40.0%
! TTGGGTTAGATTGGTTGTTG+GGG + chr1_4:65953691-65953710 None:intergenic 40.0%
!! GAGGTTTGTTAAAGAGGTCT+AGG + chr1_4:65953722-65953741 None:intergenic 40.0%
! TAATGGGTCGTTGAAGATCT+TGG + chr1_4:65953917-65953936 None:intergenic 40.0%
! CCATAACTGATTTCACTACG+TGG + chr1_4:65954006-65954025 None:intergenic 40.0%
CCACGTAGTGAAATCAGTTA+TGG - chr1_4:65954003-65954022 Msa0178620:three_prime_UTR 40.0%
GAACCATGTTGAACAAGTGA+TGG + chr1_4:65954133-65954152 None:intergenic 40.0%
! TACTTTATCTCTGGTGGACA+TGG - chr1_4:65954175-65954194 Msa0178620:CDS 40.0%
CCAACAACAAACGAAAGATC+CGG + chr1_4:65954210-65954229 None:intergenic 40.0%
TGAAGCAAATAACGGTTCCT+CGG + chr1_4:65954244-65954263 None:intergenic 40.0%
TTCATCTTGGTATGGATGCT+AGG - chr1_4:65954260-65954279 Msa0178620:CDS 40.0%
TTTGGGAATGTTGATGTGGT+TGG - chr1_4:65954340-65954359 Msa0178620:CDS 40.0%
! GAATGTTGATGTGGTTGGTA+AGG - chr1_4:65954345-65954364 Msa0178620:CDS 40.0%
GGCTGATTGGATCACTTATT+TGG - chr1_4:65954366-65954385 Msa0178620:CDS 40.0%
ACGTAGCGTAATAGCAACAT+TGG + chr1_4:65954398-65954417 None:intergenic 40.0%
TATCCTCTCATTACACAGGA+TGG - chr1_4:65954484-65954503 Msa0178620:CDS 40.0%
ATACCATCCTGTGTAATGAG+AGG + chr1_4:65954490-65954509 None:intergenic 40.0%
GTAATGAGTGTGATGTGAGT+TGG - chr1_4:65954583-65954602 Msa0178620:intron 40.0%
!! TGTGGTGGTTTGGTATTCAT+TGG - chr1_4:65954672-65954691 Msa0178620:CDS 40.0%
! GAATGTTTCTGCCACTGTTT+AGG - chr1_4:65954694-65954713 Msa0178620:CDS 40.0%
GTAATGAGTGTGATGTGAGT+TGG - chr1_4:65954583-65954602 Msa0178620:intron 40.0%
CATTGAGATTGTTCTGTGTG+TGG - chr1_4:65954860-65954879 Msa0178620:intron 40.0%
!! TGTGGTGGTTTGGTATTCAT+TGG - chr1_4:65954672-65954691 Msa0178620:CDS 40.0%
! GAATGTTTCTGCCACTGTTT+AGG - chr1_4:65954694-65954713 Msa0178620:CDS 40.0%
! TATTCACCGTTTTCATGACC+AGG - chr1_4:65954960-65954979 Msa0178620:intron 40.0%
! ATCAAAGTACCATGTGGACA+GGG + chr1_4:65955365-65955384 None:intergenic 40.0%
! AATCAAAGTACCATGTGGAC+AGG + chr1_4:65955366-65955385 None:intergenic 40.0%
! AGGAATGTTTGGTAATAGCC+AGG - chr1_4:65955529-65955548 Msa0178620:intron 40.0%
GTTAAGAGGGGTCTATGAAA+AGG - chr1_4:65955570-65955589 Msa0178620:intron 40.0%
AAGGTGTACAGTTGAAACAG+GGG - chr1_4:65955598-65955617 Msa0178620:intron 40.0%
TTGAAACAGGGGTCACAAAT+AGG - chr1_4:65955609-65955628 Msa0178620:intron 40.0%
TGAAACAGGGGTCACAAATA+GGG - chr1_4:65955610-65955629 Msa0178620:intron 40.0%
!! AGTAGAAGGGTATTAAAGGG+GGG - chr1_4:65955663-65955682 Msa0178620:intron 40.0%
GAGGGTTTCAGTTTCAGATA+AGG - chr1_4:65955688-65955707 Msa0178620:intron 40.0%
CAAACTACCTCTATATGCTG+AGG - chr1_4:65955858-65955877 Msa0178620:intron 40.0%
CTAACTGATATGGTGACTAG+AGG - chr1_4:65956184-65956203 Msa0178620:intron 40.0%
AAAAGATAGAGTGGTGTGAG+TGG - chr1_4:65956266-65956285 Msa0178620:intron 40.0%
AAAGATAGAGTGGTGTGAGT+GGG - chr1_4:65956267-65956286 Msa0178620:intron 40.0%
AAGTTGAGTTCATCATCGCT+GGG - chr1_4:65956317-65956336 Msa0178620:intron 40.0%
TAGCTTCATTCACTGTCATG+AGG + chr1_4:65956383-65956402 None:intergenic 40.0%
GTTTGCTTTCGCATTTGCAA+GGG + chr1_4:65956441-65956460 None:intergenic 40.0%
TGTTTGCTTTCGCATTTGCA+AGG + chr1_4:65956442-65956461 None:intergenic 40.0%
AGGTATATACACTGTCAGCA+AGG + chr1_4:65956505-65956524 None:intergenic 40.0%
! TGGGTATTTTGTATGTGGGT+TGG + chr1_4:65956709-65956728 None:intergenic 40.0%
!! GGGGGAGTATTGTTAGATAT+AGG + chr1_4:65956884-65956903 None:intergenic 40.0%
AGGACAAGGTGAATCTTTAG+GGG + chr1_4:65956905-65956924 None:intergenic 40.0%
GAGGACAAGGTGAATCTTTA+GGG + chr1_4:65956906-65956925 None:intergenic 40.0%
TGAGGACAAGGTGAATCTTT+AGG + chr1_4:65956907-65956926 None:intergenic 40.0%
AAAGATTCACCTTGTCCTCA+AGG - chr1_4:65956907-65956926 Msa0178620:intron 40.0%
GATAACATAAGTGTCCACCA+GGG - chr1_4:65956935-65956954 Msa0178620:intron 40.0%
TCAAGGCTACTCTAGTAGTT+AGG + chr1_4:65957065-65957084 None:intergenic 40.0%
TGTTGCTACAGCACAAAGTA+AGG - chr1_4:65957143-65957162 Msa0178620:intron 40.0%
! CAGCACAATGAGAGTTTTTG+GGG + chr1_4:65957220-65957239 None:intergenic 40.0%
ATGACTCGATCACTTGCAAT+GGG + chr1_4:65957300-65957319 None:intergenic 40.0%
GGTTGCCAACCAATTACAAT+GGG + chr1_4:65957338-65957357 None:intergenic 40.0%
!! TTGATGATGTATTAGGCCCT+TGG + chr1_4:65957383-65957402 None:intergenic 40.0%
! TTTTATGAGCAGGAGGAACA+TGG + chr1_4:65957478-65957497 None:intergenic 40.0%
TAACTCCTTCACCTTTCACT+TGG - chr1_4:65957550-65957569 Msa0178620:intron 40.0%
GAATTCCATCTCAAGGTCAT+TGG + chr1_4:65957608-65957627 None:intergenic 40.0%
CAAACAGGAATTCCATCTCA+AGG + chr1_4:65957615-65957634 None:intergenic 40.0%
ATTGATGAAGGGGCTCTTAA+AGG + chr1_4:65957685-65957704 None:intergenic 40.0%
GGGTGAGAGAAATTAAAAGG+TGG + chr1_4:65957839-65957858 None:intergenic 40.0%
! AACAATAAACCTAGTGGGTC+AGG + chr1_4:65957883-65957902 None:intergenic 40.0%
AACAGTGGAACAAATTGGTC+AGG + chr1_4:65957921-65957940 None:intergenic 40.0%
!! TTCCACTGTTTTTCTCCTTC+TGG - chr1_4:65957931-65957950 Msa0178620:intron 40.0%
AACCAGAAGGAGAAAAACAG+TGG + chr1_4:65957936-65957955 None:intergenic 40.0%
AGCCATTGGGTTATGAAAAG+GGG + chr1_4:65957981-65958000 None:intergenic 40.0%
TGGACAGGAATAGAGTTACT+AGG + chr1_4:65958023-65958042 None:intergenic 40.0%
ACAGGGTCAATTGTTAAGGT+TGG + chr1_4:65958113-65958132 None:intergenic 40.0%
GGAAGGATTGTGAGATCAAA+AGG + chr1_4:65958139-65958158 None:intergenic 40.0%
ATCTGCAGGTCACAATGAAT+CGG + chr1_4:65958564-65958583 None:intergenic 40.0%
TGCATGGTACAAAAATCTGC+AGG + chr1_4:65958578-65958597 None:intergenic 40.0%
TATGAAGAGTCAAAGGAGGT+TGG + chr1_4:65958698-65958717 None:intergenic 40.0%
TCTCATTCAGAACGTACTCA+TGG - chr1_4:65958729-65958748 Msa0178620:intron 40.0%
GAAATTCATCCCAGACCTAT+GGG + chr1_4:65958792-65958811 None:intergenic 40.0%
AGAAATTCATCCCAGACCTA+TGG + chr1_4:65958793-65958812 None:intergenic 40.0%
!! TGGTGGTCTTATTGGAAGAA+TGG + chr1_4:65958860-65958879 None:intergenic 40.0%
CTTCCAATAAGACCACCAAT+TGG - chr1_4:65958862-65958881 Msa0178620:intron 40.0%
!! CTTCCAATTGGTGGTCTTAT+TGG + chr1_4:65958868-65958887 None:intergenic 40.0%
GTTACTCTGTATGCTTTCAG+AGG + chr1_4:65958896-65958915 None:intergenic 40.0%
AGAGAAAATGAAGGTCGACT+GGG + chr1_4:65958918-65958937 None:intergenic 40.0%
GGTGGTTGATCCAGTTAAAA+CGG + chr1_4:65958967-65958986 None:intergenic 40.0%
GAAAGGAAGATGTCTATTGG+TGG + chr1_4:65958985-65959004 None:intergenic 40.0%
CTGATACCAGTGTTAGATAC+TGG - chr1_4:65959107-65959126 Msa0178620:intron 40.0%
TCTGAACCAGTATCTAACAC+TGG + chr1_4:65959116-65959135 None:intergenic 40.0%
GTGGATGTCAGATATTGATG+TGG + chr1_4:65959541-65959560 None:intergenic 40.0%
!! GAGAGAAGAAGGTGTTAGTT+TGG + chr1_4:65959586-65959605 None:intergenic 40.0%
ACACCTTCTTCTCTCTTCTT+TGG - chr1_4:65959591-65959610 Msa0178620:intron 40.0%
ACATAACCTGAACGAATGAG+CGG + chr1_4:65959688-65959707 None:intergenic 40.0%
! TGACACAAACTGTTTGAGGT+TGG - chr1_4:65959758-65959777 Msa0178620:intron 40.0%
TATGTTGCCAGTTCGCAATT+AGG + chr1_4:65959801-65959820 None:intergenic 40.0%
ATACCAAGTTCTACGGTCAT+CGG + chr1_4:65959889-65959908 None:intergenic 40.0%
GAATAAGTGCCACAAAGTAG+AGG + chr1_4:65960257-65960276 None:intergenic 40.0%
CTTTGTGGCACTTATTCAGT+TGG - chr1_4:65960260-65960279 Msa0178620:intron 40.0%
AAGCCTATTGTAGTTGATCC+AGG - chr1_4:65960335-65960354 Msa0178620:intron 40.0%
GTTCCTGGATCAACTACAAT+AGG + chr1_4:65960341-65960360 None:intergenic 40.0%
CTCCTTGCTAAATATGTTCC+TGG + chr1_4:65960356-65960375 None:intergenic 40.0%
GTGAAGAGTTTGAATGCATC+AGG + chr1_4:65960416-65960435 None:intergenic 40.0%
GATGCATTCAAACTCTTCAC+TGG - chr1_4:65960416-65960435 Msa0178620:intron 40.0%
GAAAATGCAGAACTCCAGAA+AGG + chr1_4:65960557-65960576 None:intergenic 40.0%
TTGTCAATCATATCCAGCAC+GGG + chr1_4:65960826-65960845 None:intergenic 40.0%
! TTTCTAGCCTTCTTGATGAC+TGG - chr1_4:65960995-65961014 Msa0178620:CDS 40.0%
AGTGTCTATGATGTGATCAC+TGG + chr1_4:65961041-65961060 None:intergenic 40.0%
!! ATGCATTTTGATGAGCCTTG+GGG - chr1_4:65961238-65961257 Msa0178620:five_prime_UTR 40.0%
CAAAATAATACAGCACCCCA+AGG + chr1_4:65961256-65961275 None:intergenic 40.0%
!!! CTTGGGGTGCTGTATTATTT+TGG - chr1_4:65961254-65961273 Msa0178620:five_prime_UTR 40.0%
!! TGATTCAAAGGCATCATTGG+AGG + chr1_4:65961302-65961321 None:intergenic 40.0%
TATCCTCCCACTTGATTCAA+AGG + chr1_4:65961314-65961333 None:intergenic 40.0%
! TGGGTTAGATTGGTTGTTGG+GGG + chr1_4:65953690-65953709 None:intergenic 45.0%
GTGGACATGGTGATAAAGAC+CGG - chr1_4:65954188-65954207 Msa0178620:CDS 45.0%
!! CCGGATCTTTCGTTTGTTGT+TGG - chr1_4:65954207-65954226 Msa0178620:CDS 45.0%
! TGTTGGCTGTTTATCATCCG+AGG - chr1_4:65954224-65954243 Msa0178620:CDS 45.0%
TGCTAGGAATGAAGAGAGAC+AGG - chr1_4:65954276-65954295 Msa0178620:CDS 45.0%
GCTAGGAATGAAGAGAGACA+GGG - chr1_4:65954277-65954296 Msa0178620:CDS 45.0%
CTAGGAATGAAGAGAGACAG+GGG - chr1_4:65954278-65954297 Msa0178620:CDS 45.0%
!! TGATGCCGTTAGTTCTGTTC+CGG - chr1_4:65954306-65954325 Msa0178620:CDS 45.0%
AATCGCCGGAACAGAACTAA+CGG + chr1_4:65954314-65954333 None:intergenic 45.0%
!! TTAGTTCTGTTCCGGCGATT+CGG - chr1_4:65954314-65954333 Msa0178620:CDS 45.0%
!! GGCTTTTGGGAATGTTGATG+TGG - chr1_4:65954336-65954355 Msa0178620:CDS 45.0%
!! ATGTGGTTGGTAAGGCTGAT+TGG - chr1_4:65954353-65954372 Msa0178620:CDS 45.0%
TGAGATTGTTCTGTGTGTGG+TGG - chr1_4:65954657-65954676 Msa0178620:intron 45.0%
TTGTTCTGTGTGTGGTGGTT+TGG - chr1_4:65954662-65954681 Msa0178620:intron 45.0%
TGAGATTGTTCTGTGTGTGG+TGG - chr1_4:65954657-65954676 Msa0178620:intron 45.0%
TTGTTCTGTGTGTGGTGGTT+TGG - chr1_4:65954662-65954681 Msa0178620:intron 45.0%
TAAAATGAGCCCTGTCCACA+TGG - chr1_4:65955353-65955372 Msa0178620:intron 45.0%
GAAACAGGGGTCACAAATAG+GGG - chr1_4:65955611-65955630 Msa0178620:intron 45.0%
AAACAGGGGTCACAAATAGG+GGG - chr1_4:65955612-65955631 Msa0178620:intron 45.0%
AGCAAAGAGGAACAGGCAAA+GGG + chr1_4:65955771-65955790 None:intergenic 45.0%
TGTAACCAGCAAAGAGGAAC+AGG + chr1_4:65955778-65955797 None:intergenic 45.0%
AATGGCTGTAACCAGCAAAG+AGG + chr1_4:65955784-65955803 None:intergenic 45.0%
!! TGAAGAGATTGGTTCTGAGC+TGG - chr1_4:65955901-65955920 Msa0178620:intron 45.0%
!! GAAGAGATTGGTTCTGAGCT+GGG - chr1_4:65955902-65955921 Msa0178620:intron 45.0%
!! AAGAGATTGGTTCTGAGCTG+GGG - chr1_4:65955903-65955922 Msa0178620:intron 45.0%
AAGAAGACTGAAGGATGGCA+TGG - chr1_4:65956087-65956106 Msa0178620:intron 45.0%
! TGGCATGGTATTCTAGTTGC+AGG - chr1_4:65956102-65956121 Msa0178620:intron 45.0%
! GGCATGGTATTCTAGTTGCA+GGG - chr1_4:65956103-65956122 Msa0178620:intron 45.0%
AAGATAGAGTGGTGTGAGTG+GGG - chr1_4:65956268-65956287 Msa0178620:intron 45.0%
GAAGTTGAGTTCATCATCGC+TGG - chr1_4:65956316-65956335 Msa0178620:intron 45.0%
AGTTGAGTTCATCATCGCTG+GGG - chr1_4:65956318-65956337 Msa0178620:intron 45.0%
CAGTGAATGAAGCTACCAAC+TGG - chr1_4:65956388-65956407 Msa0178620:intron 45.0%
GTTCAATGTGAAGCTCCAGT+TGG + chr1_4:65956406-65956425 None:intergenic 45.0%
CAGAAAGGTAACCAACCTCT+AGG - chr1_4:65956657-65956676 Msa0178620:intron 45.0%
AGAGGAAAAGGGTGGACATT+GGG + chr1_4:65956728-65956747 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+TGG + chr1_4:65956736-65956755 None:intergenic 45.0%
! ACAAGGTGAATCTTTAGGGG+GGG + chr1_4:65956902-65956921 None:intergenic 45.0%
! GACAAGGTGAATCTTTAGGG+GGG + chr1_4:65956903-65956922 None:intergenic 45.0%
GGACAAGGTGAATCTTTAGG+GGG + chr1_4:65956904-65956923 None:intergenic 45.0%
TATCCTTCACCTTGAGGACA+AGG + chr1_4:65956919-65956938 None:intergenic 45.0%
GGATAACATAAGTGTCCACC+AGG - chr1_4:65956934-65956953 Msa0178620:intron 45.0%
! TACTTCAAGTTATGGGACCC+TGG + chr1_4:65956955-65956974 None:intergenic 45.0%
!!! ACGGCTGTTTTTCTAGTGGT+CGG + chr1_4:65956994-65957013 None:intergenic 45.0%
ATTCTCTCATCTCAGCCTTG+AGG + chr1_4:65957019-65957038 None:intergenic 45.0%
CAAGGCTGAGATGAGAGAAT+TGG - chr1_4:65957019-65957038 Msa0178620:intron 45.0%
CTTGCAAGCTACTTGTGTCA+AGG + chr1_4:65957082-65957101 None:intergenic 45.0%
CACAAAGTAAGGCGACAACT+AGG - chr1_4:65957154-65957173 Msa0178620:intron 45.0%
TAAGGCGACAACTAGGACAA+TGG - chr1_4:65957161-65957180 Msa0178620:intron 45.0%
AAAACCGAGTCATTTCCTCC+AGG - chr1_4:65957249-65957268 Msa0178620:intron 45.0%
GATGACTCGATCACTTGCAA+TGG + chr1_4:65957301-65957320 None:intergenic 45.0%
ACAATGGGAGTGGAATTGTG+TGG + chr1_4:65957323-65957342 None:intergenic 45.0%
CCAACCAATTACAATGGGAG+TGG + chr1_4:65957333-65957352 None:intergenic 45.0%
CCACTCCCATTGTAATTGGT+TGG - chr1_4:65957330-65957349 Msa0178620:intron 45.0%
CGGTTGCCAACCAATTACAA+TGG + chr1_4:65957339-65957358 None:intergenic 45.0%
! GATCTCTTCAATGGTGGTGA+TGG + chr1_4:65957412-65957431 None:intergenic 45.0%
GAGGAACATGGAAGTGGAAA+GGG + chr1_4:65957466-65957485 None:intergenic 45.0%
CCATTGGGTTATGAAAAGGG+GGG + chr1_4:65957979-65957998 None:intergenic 45.0%
GCCATTGGGTTATGAAAAGG+GGG + chr1_4:65957980-65957999 None:intergenic 45.0%
GTTTCAACGTCGCTTCAGTT+GGG + chr1_4:65958160-65958179 None:intergenic 45.0%
GCAACACACTTGCAACTGAA+CGG + chr1_4:65958187-65958206 None:intergenic 45.0%
TGGCATCAACCAACTTGCAA+TGG + chr1_4:65958231-65958250 None:intergenic 45.0%
!! ATTGCAAGTTGGTTGATGCC+AGG - chr1_4:65958230-65958249 Msa0178620:intron 45.0%
CTTCAGATGCAACAAGAGAC+AGG + chr1_4:65958334-65958353 None:intergenic 45.0%
AACCTGTGACAGATCTCCAA+CGG + chr1_4:65958391-65958410 None:intergenic 45.0%
! GTTGGTAAGGAGACAAACTC+TGG + chr1_4:65958680-65958699 None:intergenic 45.0%
!! AGAGTCAAAGGAGGTTGGTA+AGG + chr1_4:65958693-65958712 None:intergenic 45.0%
TCAGAGGAGAAGCTTCCAAT+TGG + chr1_4:65958880-65958899 None:intergenic 45.0%
CAGAGAAAATGAAGGTCGAC+TGG + chr1_4:65958919-65958938 None:intergenic 45.0%
AGAGTGAGAGCCAATGATGT+TGG + chr1_4:65959032-65959051 None:intergenic 45.0%
CAGAAAGGTAACCAACCTCT+AGG - chr1_4:65956657-65956676 Msa0178620:intron 45.0%
!!! TTTTGGGTGTGGGTTGGTTT+GGG + chr1_4:65959284-65959303 None:intergenic 45.0%
!!! ATTTTGGGTGTGGGTTGGTT+TGG + chr1_4:65959285-65959304 None:intergenic 45.0%
!! GCATTGGGTATTTTGGGTGT+GGG + chr1_4:65959294-65959313 None:intergenic 45.0%
AAGATGCAGAGGAAAAGGGT+GGG + chr1_4:65956735-65956754 None:intergenic 45.0%
AAAGATGCAGAGGAAAAGGG+TGG + chr1_4:65956736-65956755 None:intergenic 45.0%
TCAAGACAGAGTTGAGAGCA+GGG + chr1_4:65959487-65959506 None:intergenic 45.0%
ATCAAGACAGAGTTGAGAGC+AGG + chr1_4:65959488-65959507 None:intergenic 45.0%
GAGCCAAAGAAGAGAGAAGA+AGG + chr1_4:65959597-65959616 None:intergenic 45.0%
! GTGAAAGTGATGGAGGAGAA+AGG + chr1_4:65959643-65959662 None:intergenic 45.0%
! AGAGAGTGTGAAAGTGATGG+AGG + chr1_4:65959650-65959669 None:intergenic 45.0%
! GTGAGAGAGTGTGAAAGTGA+TGG + chr1_4:65959653-65959672 None:intergenic 45.0%
TTTGCATCAGAACTGTGCAG+AGG - chr1_4:65959722-65959741 Msa0178620:intron 45.0%
TGGCTGACACAAACTGTTTG+AGG - chr1_4:65959754-65959773 Msa0178620:intron 45.0%
TCATCAGCCTAATTGCGAAC+TGG - chr1_4:65959791-65959810 Msa0178620:intron 45.0%
!! TGCTTTGGTTCTTGGAGTTG+TGG - chr1_4:65959827-65959846 Msa0178620:intron 45.0%
ATTGAGGTCTCTATTCACGG+AGG + chr1_4:65960174-65960193 None:intergenic 45.0%
ATTGATCACACTGGTGACCT+TGG - chr1_4:65960197-65960216 Msa0178620:intron 45.0%
! GTAGAGGTATGATTCAGCAG+TGG + chr1_4:65960241-65960260 None:intergenic 45.0%
! TGGAGTTCTGCATTTTCGGT+TGG - chr1_4:65960560-65960579 Msa0178620:intron 45.0%
! GGAGTTCTGCATTTTCGGTT+GGG - chr1_4:65960561-65960580 Msa0178620:intron 45.0%
AGGAAGAGAGGTTCCATCTT+CGG + chr1_4:65960733-65960752 None:intergenic 45.0%
AGCATTTGCAAGACAGTTCG+AGG - chr1_4:65960792-65960811 Msa0178620:CDS 45.0%
TGTCAATCATATCCAGCACG+GGG + chr1_4:65960825-65960844 None:intergenic 45.0%
TATTCTTAAGCCAGGTCCTC+AGG - chr1_4:65960951-65960970 Msa0178620:CDS 45.0%
TCCTCAGGCTAAAAAGCTTG+AGG - chr1_4:65960966-65960985 Msa0178620:CDS 45.0%
TTGAGAGTTGGAATGGGGAA+GGG - chr1_4:65961213-65961232 Msa0178620:five_prime_UTR 45.0%
!!! GGGGTGCTGTATTATTTTGG+AGG - chr1_4:65961257-65961276 Msa0178620:five_prime_UTR 45.0%
ATGCCTTTGAATCAAGTGGG+AGG - chr1_4:65961308-65961327 Msa0178620:five_prime_UTR 45.0%
GGGGGAGTTACAGAAGAAGA+TGG + chr1_4:65953672-65953691 None:intergenic 50.0%
GAATGAAGAGAGACAGGGGT+TGG - chr1_4:65954282-65954301 Msa0178620:CDS 50.0%
! TAGTTCTGTTCCGGCGATTC+GGG - chr1_4:65954315-65954334 Msa0178620:CDS 50.0%
!! AGAAGGGTATTAAAGGGGGG+TGG - chr1_4:65955666-65955685 Msa0178620:intron 50.0%
!! AGAAGGGTGCTTATAGGGGA+TGG - chr1_4:65955718-65955737 Msa0178620:intron 50.0%
!! GAAGGGTGCTTATAGGGGAT+GGG - chr1_4:65955719-65955738 Msa0178620:intron 50.0%
!! AAGGGTGCTTATAGGGGATG+GGG - chr1_4:65955720-65955739 Msa0178620:intron 50.0%
GCAAAGAGGAACAGGCAAAG+GGG + chr1_4:65955770-65955789 None:intergenic 50.0%
CAGCAAAGAGGAACAGGCAA+AGG + chr1_4:65955772-65955791 None:intergenic 50.0%
CTTTGCCTGTTCCTCTTTGC+TGG - chr1_4:65955770-65955789 Msa0178620:intron 50.0%
CGAGTTCCCTCAGCATATAG+AGG + chr1_4:65955868-65955887 None:intergenic 50.0%
GCGTCACGATTCAAGGGAAA+TGG - chr1_4:65956294-65956313 Msa0178620:intron 50.0%
GCTCTCTAACTCCTAGAGGT+TGG + chr1_4:65956671-65956690 None:intergenic 50.0%
CTAGGCTCTCTAACTCCTAG+AGG + chr1_4:65956675-65956694 None:intergenic 50.0%
CAGAGGAAAAGGGTGGACAT+TGG + chr1_4:65956729-65956748 None:intergenic 50.0%
TCACCTTGTCCTCAAGGTGA+AGG - chr1_4:65956913-65956932 Msa0178620:intron 50.0%
! TTCAAGTTATGGGACCCTGG+TGG + chr1_4:65956952-65956971 None:intergenic 50.0%
!!! GGACACGGCTGTTTTTCTAG+TGG + chr1_4:65956998-65957017 None:intergenic 50.0%
GAAAAACAGCCGTGTCCTCA+AGG - chr1_4:65957001-65957020 Msa0178620:intron 50.0%
TCATCTCAGCCTTGAGGACA+CGG + chr1_4:65957013-65957032 None:intergenic 50.0%
GGATCCTGGAGGAAATGACT+CGG + chr1_4:65957256-65957275 None:intergenic 50.0%
TTCCTCCAGGATCCCATTGA+TGG - chr1_4:65957262-65957281 Msa0178620:intron 50.0%
TCCTCCAGGATCCCATTGAT+GGG - chr1_4:65957263-65957282 Msa0178620:intron 50.0%
! TCACTTGCAATGGGCTTGTC+CGG + chr1_4:65957291-65957310 None:intergenic 50.0%
GGAGGAACATGGAAGTGGAA+AGG + chr1_4:65957467-65957486 None:intergenic 50.0%
CTGCTCCAATGACCTTGAGA+TGG - chr1_4:65957600-65957619 Msa0178620:intron 50.0%
! TGTTTTGTGCCTGACCCACT+AGG - chr1_4:65957871-65957890 Msa0178620:intron 50.0%
TTGGGTTATGAAAAGGGGGG+TGG + chr1_4:65957976-65957995 None:intergenic 50.0%
! CCCCCCTTTTCATAACCCAA+TGG - chr1_4:65957976-65957995 Msa0178620:intron 50.0%
CGTTTCAACGTCGCTTCAGT+TGG + chr1_4:65958161-65958180 None:intergenic 50.0%
CTTTCCCTTCCTCCTTGGAT+CGG - chr1_4:65958306-65958325 Msa0178620:intron 50.0%
TTTCCCTTCCTCCTTGGATC+GGG - chr1_4:65958307-65958326 Msa0178620:intron 50.0%
GCATCTGAAGACGACCAATC+CGG - chr1_4:65958344-65958363 Msa0178620:intron 50.0%
TGACTAGAGTCTAGCGACTC+TGG - chr1_4:65958410-65958429 Msa0178620:intron 50.0%
! GGTGGTGGTGATTGTGATGA+AGG - chr1_4:65958431-65958450 Msa0178620:intron 50.0%
GGTGGTGATTGTGATGAAGG+CGG - chr1_4:65958434-65958453 Msa0178620:intron 50.0%
GATTGTGATGAAGGCGGATC+TGG - chr1_4:65958440-65958459 Msa0178620:intron 50.0%
AACGAGGTGAGAAGGAGAGA+AGG + chr1_4:65958499-65958518 None:intergenic 50.0%
TGAGACACAACGAGGTGAGA+AGG + chr1_4:65958507-65958526 None:intergenic 50.0%
TGCAGGTCACAATGAATCGG+TGG + chr1_4:65958561-65958580 None:intergenic 50.0%
GCATCGAACAACCACTAGAG+CGG + chr1_4:65958637-65958656 None:intergenic 50.0%
! GGATCGCTGCTTAGTTTGAG+CGG + chr1_4:65958659-65958678 None:intergenic 50.0%
GATATGCTCGAGTCTGCAGA+AGG + chr1_4:65958770-65958789 None:intergenic 50.0%
CAGACTCGAGCATATCCCAT+AGG - chr1_4:65958774-65958793 Msa0178620:intron 50.0%
TCGAGCATATCCCATAGGTC+TGG - chr1_4:65958779-65958798 Msa0178620:intron 50.0%
CGAGCATATCCCATAGGTCT+GGG - chr1_4:65958780-65958799 Msa0178620:intron 50.0%
ATGGCAATCAGAATGCGACG+TGG + chr1_4:65958841-65958860 None:intergenic 50.0%
GAGGAGAAGCTTCCAATTGG+TGG + chr1_4:65958877-65958896 None:intergenic 50.0%
GCTCTCTAACTCCTAGAGGT+TGG + chr1_4:65956671-65956690 None:intergenic 50.0%
CTAGGCTCTCTAACTCCTAG+AGG + chr1_4:65956675-65956694 None:intergenic 50.0%
!! TGGGTATTTTGGGTGTGGGT+TGG + chr1_4:65959290-65959309 None:intergenic 50.0%
!! GGCATTGGGTATTTTGGGTG+TGG + chr1_4:65959295-65959314 None:intergenic 50.0%
!!! GGGTGGGCATTGGGTATTTT+GGG + chr1_4:65959300-65959319 None:intergenic 50.0%
!!! AGGGTGGGCATTGGGTATTT+TGG + chr1_4:65959301-65959320 None:intergenic 50.0%
AGAGGAAAAGGGTGGGCATT+GGG + chr1_4:65959309-65959328 None:intergenic 50.0%
CAAGACAGAGTTGAGAGCAG+GGG + chr1_4:65959486-65959505 None:intergenic 50.0%
TCTCCGATGACCGTAGAACT+TGG - chr1_4:65959883-65959902 Msa0178620:intron 50.0%
ATCACACTGGTGACCTTGGA+TGG - chr1_4:65960201-65960220 Msa0178620:intron 50.0%
GGCACTTATTCAGTTGGTCC+TGG - chr1_4:65960266-65960285 Msa0178620:intron 50.0%
! GAATGCTTTTCATGCCGCTC+AGG - chr1_4:65960505-65960524 Msa0178620:intron 50.0%
TGCAGAACTCCAGAAAGGGT+CGG + chr1_4:65960552-65960571 None:intergenic 50.0%
ATGGGACAATCCTCCGAAGA+TGG - chr1_4:65960717-65960736 Msa0178620:CDS 50.0%
AAGAGAGGTTCCATCTTCGG+AGG + chr1_4:65960730-65960749 None:intergenic 50.0%
!! AGCTTTTTAGCCTGAGGACC+TGG + chr1_4:65960964-65960983 None:intergenic 50.0%
!! GCCTCAAGCTTTTTAGCCTG+AGG + chr1_4:65960970-65960989 None:intergenic 50.0%
GATTGCGCAGCTTCCTACAA+TGG + chr1_4:65961075-65961094 None:intergenic 50.0%
GTTGAGAGTTGGAATGGGGA+AGG - chr1_4:65961212-65961231 Msa0178620:five_prime_UTR 50.0%
CTCATCTGTACGATTCGAGC+AGG - chr1_4:65961385-65961404 Msa0178620:five_prime_UTR 50.0%
!! TTCCGGCGATTCGGGCTTTT+GGG - chr1_4:65954323-65954342 Msa0178620:CDS 55.0%
TTCCCAAAAGCCCGAATCGC+CGG + chr1_4:65954328-65954347 None:intergenic 55.0%
! AGGGTATTAAAGGGGGGTGG+AGG - chr1_4:65955669-65955688 Msa0178620:intron 55.0%
GGGTATTAAAGGGGGGTGGA+GGG - chr1_4:65955670-65955689 Msa0178620:intron 55.0%
TGCTTATAGGGGATGGGGCA+GGG - chr1_4:65955725-65955744 Msa0178620:intron 55.0%
GGGTCAGCGTCACGATTCAA+GGG - chr1_4:65956288-65956307 Msa0178620:intron 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG + chr1_4:65956693-65956712 None:intergenic 55.0%
TCCCATCAATGGGATCCTGG+AGG + chr1_4:65957267-65957286 None:intergenic 55.0%
AGGATCCCATTGATGGGAGC+CGG - chr1_4:65957269-65957288 Msa0178620:intron 55.0%
CTTGTCCGGCTCCCATCAAT+GGG + chr1_4:65957277-65957296 None:intergenic 55.0%
GAGCAGGAGGAACATGGAAG+TGG + chr1_4:65957472-65957491 None:intergenic 55.0%
CAACGTCGCTTCAGTTGGGA+AGG + chr1_4:65958156-65958175 None:intergenic 55.0%
! GCAAGTGTGTTGCTCGTCGT+CGG - chr1_4:65958194-65958213 Msa0178620:intron 55.0%
GCGGTCGAACCATTGCAAGT+TGG - chr1_4:65958219-65958238 Msa0178620:intron 55.0%
!! GCAAGTTGGTTGATGCCAGG+CGG - chr1_4:65958233-65958252 Msa0178620:intron 55.0%
ACATACCACCGCCGCTGAAA+TGG + chr1_4:65958265-65958284 None:intergenic 55.0%
TGGCTCTTTCCCTTCCTCCT+TGG - chr1_4:65958301-65958320 Msa0178620:intron 55.0%
TTCCCTTCCTCCTTGGATCG+GGG - chr1_4:65958308-65958327 Msa0178620:intron 55.0%
TCTGAAGACGACCAATCCGG+TGG - chr1_4:65958347-65958366 Msa0178620:intron 55.0%
AGACGACCAATCCGGTGGTT+TGG - chr1_4:65958352-65958371 Msa0178620:intron 55.0%
GACGACCAATCCGGTGGTTT+GGG - chr1_4:65958353-65958372 Msa0178620:intron 55.0%
CTCCGTTGGAGATCTGTCAC+AGG - chr1_4:65958386-65958405 Msa0178620:intron 55.0%
CTAGAGTCTAGCGACTCTGG+TGG - chr1_4:65958413-65958432 Msa0178620:intron 55.0%
GCAGCAACTGAGACACAACG+AGG + chr1_4:65958515-65958534 None:intergenic 55.0%
TCCTGATGTGACCGCTCTAG+TGG - chr1_4:65958623-65958642 Msa0178620:intron 55.0%
ACCACTAGAGCGGTCACATC+AGG + chr1_4:65958627-65958646 None:intergenic 55.0%
!! GGGTTGGTTTGGGAGAGACT+AGG + chr1_4:65956693-65956712 None:intergenic 55.0%
CAGAGGAAAAGGGTGGGCAT+TGG + chr1_4:65959310-65959329 None:intergenic 55.0%
!! AGAACTGTGCAGAGGCGTTG+TGG - chr1_4:65959730-65959749 Msa0178620:intron 55.0%
CAGGGATGTGTTGCACGCAT+CGG + chr1_4:65960454-65960473 None:intergenic 55.0%
CACATTGAGCCGACCCTTTC+TGG - chr1_4:65960540-65960559 Msa0178620:intron 55.0%
ACATCACCCCACTGTGAGCA+CGG + chr1_4:65960928-65960947 None:intergenic 55.0%
GTGCGGTCCAGTCATCAAGA+AGG + chr1_4:65961005-65961024 None:intergenic 55.0%
!! CTGGCACTGATTCGTCTGTG+CGG + chr1_4:65961022-65961041 None:intergenic 55.0%
!! GTTCCGGCGATTCGGGCTTT+TGG - chr1_4:65954322-65954341 Msa0178620:CDS 60.0%
GGGGTCACAAATAGGGGGAG+AGG - chr1_4:65955617-65955636 Msa0178620:intron 60.0%
GTGCTTATAGGGGATGGGGC+AGG - chr1_4:65955724-65955743 Msa0178620:intron 60.0%
GAACAGGCAAAGGGGTCCAG+GGG + chr1_4:65955762-65955781 None:intergenic 60.0%
GGAACAGGCAAAGGGGTCCA+GGG + chr1_4:65955763-65955782 None:intergenic 60.0%
AGGAACAGGCAAAGGGGTCC+AGG + chr1_4:65955764-65955783 None:intergenic 60.0%
GGGGTCAGCGTCACGATTCA+AGG - chr1_4:65956287-65956306 Msa0178620:intron 60.0%
GGCTCCCATCAATGGGATCC+TGG + chr1_4:65957270-65957289 None:intergenic 60.0%
GCTTGTCCGGCTCCCATCAA+TGG + chr1_4:65957278-65957297 None:intergenic 60.0%
! GTGTTGCTCGTCGTCGGTAG+CGG - chr1_4:65958200-65958219 Msa0178620:intron 60.0%
! TGGTTGATGCCAGGCGGTTC+CGG - chr1_4:65958239-65958258 Msa0178620:intron 60.0%
AAGAGACAGGCCCCGATCCA+AGG + chr1_4:65958321-65958340 None:intergenic 60.0%
! GACCAATCCGGTGGTTTGGG+TGG - chr1_4:65958356-65958375 Msa0178620:intron 60.0%
! CAATCCGGTGGTTTGGGTGG+CGG - chr1_4:65958359-65958378 Msa0178620:intron 60.0%
AGAACCGCCACCCAAACCAC+CGG + chr1_4:65958366-65958385 None:intergenic 60.0%
GAGTCTAGCGACTCTGGTGG+TGG - chr1_4:65958416-65958435 Msa0178620:intron 60.0%
GAAGGCGGATCTGGTGTCTC+CGG - chr1_4:65958449-65958468 Msa0178620:intron 60.0%
GATCTGGTGTCTCCGGTGGA+GGG - chr1_4:65958456-65958475 Msa0178620:intron 60.0%
TGAACGAATGAGCGGCGCAG+TGG + chr1_4:65959680-65959699 None:intergenic 60.0%
ACTGCGCCGCTCATTCGTTC+AGG - chr1_4:65959679-65959698 Msa0178620:intron 60.0%
ATGCCGCTCAGGTTCACCGT+GGG - chr1_4:65960516-65960535 Msa0178620:intron 60.0%
TGACCCACGGTGAACCTGAG+CGG + chr1_4:65960522-65960541 None:intergenic 60.0%
! GGTCGGCTCAATGTGACCCA+CGG + chr1_4:65960535-65960554 None:intergenic 60.0%
CGAGGCTAATAACCCCGTGC+TGG - chr1_4:65960810-65960829 Msa0178620:CDS 60.0%
GGTGGATCCGTGCTCACAGT+GGG - chr1_4:65960918-65960937 Msa0178620:CDS 60.0%
GTGGATCCGTGCTCACAGTG+GGG - chr1_4:65960919-65960938 Msa0178620:CDS 60.0%
CAGGGCTCAATTGCCTCCCC+TGG - chr1_4:65955743-65955762 Msa0178620:intron 65.0%
CTGAAATGGCCGGAACCGCC+TGG + chr1_4:65958251-65958270 None:intergenic 65.0%
GGCGGTTCCGGCCATTTCAG+CGG - chr1_4:65958251-65958270 Msa0178620:intron 65.0%
GGTTCCGGCCATTTCAGCGG+CGG - chr1_4:65958254-65958273 Msa0178620:intron 65.0%
ACCACCGCCGCTGAAATGGC+CGG + chr1_4:65958261-65958280 None:intergenic 65.0%
GGCCCCGATCCAAGGAGGAA+GGG + chr1_4:65958313-65958332 None:intergenic 65.0%
AGGCCCCGATCCAAGGAGGA+AGG + chr1_4:65958314-65958333 None:intergenic 65.0%
AGACAGGCCCCGATCCAAGG+AGG + chr1_4:65958318-65958337 None:intergenic 65.0%
CGCCACCCAAACCACCGGAT+TGG + chr1_4:65958361-65958380 None:intergenic 65.0%
! TGGGTGGCGGTTCTCTCCGT+TGG - chr1_4:65958372-65958391 Msa0178620:intron 65.0%
GGATCTGGTGTCTCCGGTGG+AGG - chr1_4:65958455-65958474 Msa0178620:intron 65.0%
! CTCCGGTGGAGGGTGCAGAT+CGG - chr1_4:65958466-65958485 Msa0178620:intron 65.0%
! TCCGGTGGAGGGTGCAGATC+GGG - chr1_4:65958467-65958486 Msa0178620:intron 65.0%
TCCCGATCTGCACCCTCCAC+CGG + chr1_4:65958471-65958490 None:intergenic 65.0%
GCTCGAGTCTGCAGAAGGCG+AGG + chr1_4:65958765-65958784 None:intergenic 65.0%
!! CTGTGCAGAGGCGTTGTGGC+TGG - chr1_4:65959734-65959753 Msa0178620:intron 65.0%
CATGCCGCTCAGGTTCACCG+TGG - chr1_4:65960515-65960534 Msa0178620:intron 65.0%
CTCGGTTGCGACCACCACGT+TGG + chr1_4:65960858-65960877 None:intergenic 65.0%
GTCGCAACCGAGCTGCACCA+GGG - chr1_4:65960866-65960885 Msa0178620:CDS 65.0%
TCGCAACCGAGCTGCACCAG+GGG - chr1_4:65960867-65960886 Msa0178620:CDS 65.0%
ACCATGCCCCTGGTGCAGCT+CGG + chr1_4:65960876-65960895 None:intergenic 65.0%
GGGTGGATCCGTGCTCACAG+TGG - chr1_4:65960917-65960936 Msa0178620:CDS 65.0%
CAGGCAAAGGGGTCCAGGGG+AGG + chr1_4:65955759-65955778 None:intergenic 70.0%
TCCGGCCATTTCAGCGGCGG+TGG - chr1_4:65958257-65958276 Msa0178620:intron 70.0%
GGCGGATCTGGTGTCTCCGG+TGG - chr1_4:65958452-65958471 Msa0178620:intron 70.0%
GGTCGCAACCGAGCTGCACC+AGG - chr1_4:65960865-65960884 Msa0178620:CDS 70.0%
ACCGAGCTGCACCAGGGGCA+TGG - chr1_4:65960872-65960891 Msa0178620:CDS 70.0%
! GCACCAGGGGCATGGTGCTC+CGG - chr1_4:65960880-65960899 Msa0178620:CDS 70.0%
! CAGGGGCATGGTGCTCCGGT+CGG - chr1_4:65960884-65960903 Msa0178620:CDS 70.0%
CTCCGGTCGGAGGAGCTGGT+GGG - chr1_4:65960897-65960916 Msa0178620:CDS 70.0%
CACCCACCAGCTCCTCCGAC+CGG + chr1_4:65960902-65960921 None:intergenic 70.0%
! CGACCGGAGCACCATGCCCC+TGG + chr1_4:65960886-65960905 None:intergenic 75.0%
GGGCATGGTGCTCCGGTCGG+AGG - chr1_4:65960887-65960906 Msa0178620:CDS 75.0%
GGTGCTCCGGTCGGAGGAGC+TGG - chr1_4:65960893-65960912 Msa0178620:CDS 75.0%
GCTCCGGTCGGAGGAGCTGG+TGG - chr1_4:65960896-65960915 Msa0178620:CDS 75.0%
CGGTCGGAGGAGCTGGTGGG+TGG - chr1_4:65960900-65960919 Msa0178620:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 65953609 65961499 65953609 ID=Msa0178620;Name=Msa0178620
chr1_4 mRNA 65953609 65961499 65953609 ID=Msa0178620-mRNA-1;Parent=Msa0178620;Name=Msa0178620-mRNA-1;_AED=0.04;_eAED=0.04;_QI=413|1|1|1|1|1|4|455|397
chr1_4 exon 65953609 65954581 65953609 ID=Msa0178620-mRNA-1:exon:21510;Parent=Msa0178620-mRNA-1
chr1_4 exon 65954671 65954786 65954671 ID=Msa0178620-mRNA-1:exon:21509;Parent=Msa0178620-mRNA-1
chr1_4 exon 65954880 65954955 65954880 ID=Msa0178620-mRNA-1:exon:21508;Parent=Msa0178620-mRNA-1
chr1_4 exon 65960603 65961499 65960603 ID=Msa0178620-mRNA-1:exon:21507;Parent=Msa0178620-mRNA-1
chr1_4 five_prime_UTR 65961087 65961499 65961087 ID=Msa0178620-mRNA-1:five_prime_utr;Parent=Msa0178620-mRNA-1
chr1_4 CDS 65960603 65961086 65960603 ID=Msa0178620-mRNA-1:cds;Parent=Msa0178620-mRNA-1
chr1_4 CDS 65954880 65954955 65954880 ID=Msa0178620-mRNA-1:cds;Parent=Msa0178620-mRNA-1
chr1_4 CDS 65954671 65954786 65954671 ID=Msa0178620-mRNA-1:cds;Parent=Msa0178620-mRNA-1
chr1_4 CDS 65954064 65954581 65954064 ID=Msa0178620-mRNA-1:cds;Parent=Msa0178620-mRNA-1
chr1_4 three_prime_UTR 65953609 65954063 65953609 ID=Msa0178620-mRNA-1:three_prime_utr;Parent=Msa0178620-mRNA-1
Gene Sequence

>Msa0178620

ATGGGAGCTGAAAAAAAATGGCTTTTCACGCTATTCAGTGCAGCAGTTTTATCTCTAATGCTTTTGTTAATGTCTTCTTTTTCAACTTTCAGTTCTCAAAAGCCTTTTCCATCACTTGTTCAACATGGTTCTCATTACCCTCCTGCTTTTGCATACTTTATCTCTGGTGGACATGGTGATAAAGACCGGATCTTTCGTTTGTTGTTGGCTGTTTATCATCCGAGGAACCGTTATTTGCTTCATCTTGGTATGGATGCTAGGAATGAAGAGAGACAGGGGTTGGCTGATGCCGTTAGTTCTGTTCCGGCGATTCGGGCTTTTGGGAATGTTGATGTGGTTGGTAAGGCTGATTGGATCACTTATTTGGGTTCTTCCAATGTTGCTATTACGCTACGTGCTGCTGCTATTATGCTTAAATTGGATAGTGGATGGAATTGGTTTATCACTTTGAGTGCTCGTGATTATCCTCTCATTACACAGGATGATCTATCACATGTTTTCTCCTCCGTGAATAGAGACCTCAATTTCATTGATCACACTGGTGACCTTGGATGGAAAGAGAGTGACAGATTCAAGCCTATTGTAGTTGATCCAGGAACATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCTACAGAGAAGAGAGCAACACCTGATGCATTCAAACTCTTCACTGGTTCACCGTGGGTCACATTGAGCCGACCCTTTCTGGAGTTCTGCATTTTCGGTTGGGATAATTTACCACGAACGCTACTAATGTATTTTACAAATGTTAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAATGCACCCGAATTTAAGAACACAACAGTGAATGGTGACTTACGATACATGATATGGGACAATCCTCCGAAGATGGAACCTCTCTTCCTTAATACATCTGTTTATGATATGATGGCAGAAAGTGGAGCAGCATTTGCAAGACAGTTCGAGGCTAATAACCCCGTGCTGGATATGATTGACAAAAAAATTCTCCAACGTGGTGGTCGCAACCGAGCTGCACCAGGGGCATGGTGCTCCGGTCGGAGGAGCTGGTGGGTGGATCCGTGCTCACAGTGGGGTGATGTCAATATTCTTAAGCCAGGTCCTCAGGCTAAAAAGCTTGAGGCATCTGTTTCTAGCCTTCTTGATGACTGGACCGCACAGACGAATCAGTGCCAGTGA
Protein sequence

>Msa0178620

MGAEKKWLFTLFSAAVLSLMLLLMSSFSTFSSQKPFPSLVQHGSHYPPAFAYFISGGHGDKDRIFRLLLAVYHPRNRYLLHLGMDARNEERQGLADAVSSVPAIRAFGNVDVVGKADWITYLGSSNVAITLRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSVNRDLNFIDHTGDLGWKESDRFKPIVVDPGTYLARRSQIFQATEKRATPDAFKLFTGSPWVTLSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPLFLNTSVYDMMAESGAAFARQFEANNPVLDMIDKKILQRGGRNRAAPGAWCSGRRSWWVDPCSQWGDVNILKPGPQAKKLEASVSSLLDDWTAQTNQCQ*