AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0180440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0180440 MtrunA17_Chr1g0205121 97.487 597 1 1 1 597 1 583 0.0 1199
Msa0180440 MtrunA17_Chr5g0394901 80.189 636 73 3 1 597 1 622 0.0 1015
Msa0180440 MtrunA17_Chr1g0185281 65.058 601 164 9 1 597 1 559 0.0 760
Msa0180440 MtrunA17_Chr7g0260081 63.973 594 168 9 1 591 1 551 0.0 735
Msa0180440 MtrunA17_Chr8g0355021 44.286 490 212 8 103 591 59 488 2.47e-130 390
Msa0180440 MtrunA17_Chr6g0466801 38.305 637 324 15 1 585 1 620 2.24e-124 380
Msa0180440 MtrunA17_Chr4g0054941 37.647 595 295 15 7 572 4 551 1.02e-116 358
Msa0180440 MtrunA17_Chr8g0382571 59.245 265 106 1 324 586 208 472 3.79e-110 338
Msa0180440 MtrunA17_Chr8g0382571 58.667 75 31 0 102 176 35 109 9.11e-22 99.0
Msa0180440 MtrunA17_Chr7g0263111 58.868 265 99 2 315 578 156 411 2.43e-104 323
Msa0180440 MtrunA17_Chr7g0263111 40.000 175 79 5 6 175 5 158 3.60e-26 112
Msa0180440 MtrunA17_Chr1g0201271 53.008 266 118 4 327 591 369 628 1.79e-91 295
Msa0180440 MtrunA17_Chr1g0201271 41.509 106 62 0 88 193 84 189 2.55e-19 92.0
Msa0180440 MtrunA17_Chr4g0054951 52.075 265 123 2 322 585 303 564 2.17e-88 285
Msa0180440 MtrunA17_Chr4g0054951 31.959 194 100 3 1 192 1 164 8.48e-24 105
Msa0180440 MtrunA17_Chr5g0400311 47.249 309 147 3 283 590 333 626 1.49e-86 281
Msa0180440 MtrunA17_Chr5g0400311 34.314 204 112 6 1 192 1 194 1.53e-28 120
Msa0180440 MtrunA17_Chr1g0165011 54.008 237 102 3 329 562 178 410 3.20e-83 268
Msa0180440 MtrunA17_Chr1g0165011 46.465 99 43 3 78 175 45 134 1.96e-18 88.2
Msa0180440 MtrunA17_Chr6g0479511 50.424 236 108 4 330 562 154 383 3.39e-83 265
Msa0180440 MtrunA17_Chr6g0479511 43.519 108 55 2 75 176 10 117 9.62e-20 91.7
Msa0180440 MtrunA17_Chr8g0375751 50.382 262 124 3 318 576 135 393 1.29e-80 260
Msa0180440 MtrunA17_Chr8g0375751 54.321 81 34 2 96 175 52 130 5.33e-19 89.7
Msa0180440 MtrunA17_Chr6g0452181 47.857 280 124 7 312 586 154 416 1.41e-78 255
Msa0180440 MtrunA17_Chr6g0452181 57.692 78 31 1 101 176 51 128 1.89e-18 88.2
Msa0180440 MtrunA17_Chr1g0189231 33.184 223 126 4 327 530 606 824 4.25e-29 123
Msa0180440 MtrunA17_Chr6g0488541 38.596 114 67 2 418 530 787 898 8.59e-16 81.3
Msa0180440 MtrunA17_Chr1g0154491 31.500 200 109 9 365 553 143 325 1.77e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0180440 AT2G32010.2 73.246 613 129 10 1 597 1 594 0.0 874
Msa0180440 AT2G32010.1 73.246 613 129 10 1 597 1 594 0.0 874
Msa0180440 AT2G32010.4 73.246 613 129 10 1 597 1 594 0.0 874
Msa0180440 AT2G32010.3 73.246 613 129 10 1 597 1 594 0.0 874
Msa0180440 AT1G05470.2 70.359 641 122 10 1 597 1 617 0.0 873
Msa0180440 AT1G05470.1 70.359 641 122 10 1 597 1 617 0.0 873
Msa0180440 AT3G63240.2 59.599 599 184 12 1 595 1 545 0.0 679
Msa0180440 AT3G63240.1 59.599 599 184 12 1 595 1 545 0.0 679
Msa0180440 AT5G65090.2 44.877 488 232 7 102 586 6 459 1.74e-137 409
Msa0180440 AT5G65090.3 44.877 488 232 7 102 586 69 522 1.28e-136 409
Msa0180440 AT5G65090.1 44.877 488 232 7 102 586 69 522 1.28e-136 409
Msa0180440 AT5G04980.4 62.241 241 90 1 328 567 156 396 5.41e-105 323
Msa0180440 AT5G04980.1 62.241 241 90 1 328 567 191 431 3.42e-104 322
Msa0180440 AT5G04980.1 60.000 70 28 0 103 172 6 75 3.27e-20 94.0
Msa0180440 AT5G04980.3 62.241 241 90 1 328 567 191 431 3.42e-104 322
Msa0180440 AT5G04980.3 60.000 70 28 0 103 172 6 75 3.27e-20 94.0
Msa0180440 AT5G04980.2 62.241 241 90 1 328 567 220 460 4.00e-104 323
Msa0180440 AT5G04980.2 60.000 70 28 0 103 172 35 104 4.02e-20 94.0
Msa0180440 AT2G37440.2 59.839 249 96 2 329 577 113 357 1.66e-101 313
Msa0180440 AT2G37440.2 53.333 105 29 2 108 193 1 104 2.66e-23 102
Msa0180440 AT2G37440.1 59.839 249 96 2 329 577 194 438 1.87e-100 313
Msa0180440 AT2G37440.1 41.143 175 68 3 9 176 7 153 3.28e-28 118
Msa0180440 AT2G37440.3 59.839 249 96 2 329 577 194 438 1.87e-100 313
Msa0180440 AT2G37440.3 41.143 175 68 3 9 176 7 153 3.28e-28 118
Msa0180440 AT1G71710.1 51.550 258 119 3 329 585 408 660 4.63e-86 281
Msa0180440 AT1G71710.1 31.416 226 133 5 1 204 10 235 8.72e-22 100
Msa0180440 AT1G71710.2 51.550 258 119 3 329 585 399 651 4.76e-86 281
Msa0180440 AT1G71710.2 31.416 226 133 5 1 204 1 226 9.26e-22 100
Msa0180440 AT2G01900.1 56.652 233 96 3 330 561 154 382 1.74e-85 273
Msa0180440 AT2G01900.1 38.983 118 71 1 59 175 11 128 1.30e-17 85.9
Msa0180440 AT2G01900.3 56.652 233 96 3 330 561 162 390 1.95e-85 273
Msa0180440 AT2G01900.3 38.983 118 71 1 59 175 19 136 1.31e-17 85.9
Msa0180440 AT4G18010.1 50.575 261 125 2 318 577 378 635 9.70e-85 278
Msa0180440 AT4G18010.1 47.573 103 50 1 89 191 94 192 1.63e-24 108
Msa0180440 AT1G34120.5 49.213 254 123 4 329 580 182 431 6.73e-84 269
Msa0180440 AT1G34120.1 49.213 254 123 4 329 580 333 582 7.62e-82 268
Msa0180440 AT1G34120.1 58.442 77 32 0 101 177 96 172 8.88e-21 97.1
Msa0180440 AT1G34120.2 49.213 254 123 4 329 580 337 586 9.52e-82 268
Msa0180440 AT1G34120.2 58.442 77 32 0 101 177 100 176 9.90e-21 96.7
Msa0180440 AT2G01900.2 54.936 233 91 4 330 561 154 373 2.44e-80 259
Msa0180440 AT2G01900.2 38.983 118 71 1 59 175 11 128 1.35e-17 85.9
Msa0180440 AT1G34120.3 48.819 254 123 5 329 580 337 585 3.08e-79 261
Msa0180440 AT1G34120.3 58.442 77 32 0 101 177 100 176 1.02e-20 96.7
Msa0180440 AT4G18010.2 51.208 207 98 1 318 524 378 581 8.61e-67 228
Msa0180440 AT4G18010.2 47.573 103 50 1 89 191 94 192 1.20e-24 108
Msa0180440 AT1G34120.4 50.350 143 70 1 329 471 333 474 3.18e-45 167
Msa0180440 AT1G34120.4 58.442 77 32 0 101 177 96 172 5.11e-21 97.1
Msa0180440 AT2G43900.2 32.340 235 131 5 320 530 649 879 4.99e-31 130
Msa0180440 AT2G43900.1 32.340 235 131 5 320 530 649 879 5.11e-31 129
Msa0180440 AT1G65580.2 28.114 281 159 6 320 561 344 620 1.29e-28 122
Msa0180440 AT1G65580.1 28.114 281 159 6 320 561 610 886 1.38e-28 122
Msa0180440 AT1G05630.2 28.114 281 159 7 320 561 643 919 2.41e-28 121
Msa0180440 AT1G05630.3 30.493 223 127 5 332 530 655 873 2.88e-28 120
Msa0180440 AT2G31830.3 29.148 223 130 4 332 530 664 882 7.63e-27 116
Msa0180440 AT2G31830.2 29.148 223 130 4 332 530 664 882 8.33e-27 116
Msa0180440 AT2G31830.1 29.148 223 130 4 332 530 664 882 9.37e-27 116
Msa0180440 AT1G47510.4 33.673 196 102 8 365 553 87 261 2.25e-20 92.0
Msa0180440 AT1G47510.1 33.503 197 104 8 365 553 146 323 5.05e-20 92.0
Msa0180440 AT1G05630.1 33.333 150 82 4 428 561 806 953 1.85e-15 80.9
Msa0180440 AT1G47510.2 39.316 117 59 5 444 553 149 260 6.32e-13 69.7

Find 181 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCAAGTGTTTGTTAATT+TGG 0.087461 1_4:+68308340 None:intergenic
TTCTTGTTCTCTCTTATTTA+TGG 0.108009 1_4:-68312679 Msa0180440:five_prime_UTR
GACCTGTTTATGGCATATTT+TGG 0.108267 1_4:-68309469 Msa0180440:CDS
CAAGCAGATGCTGTTGTTTA+TGG 0.156723 1_4:-68312260 Msa0180440:CDS
TCAGACCACAGACCTGTTTA+TGG 0.185501 1_4:-68309479 Msa0180440:CDS
CCAAATTTGCATGCCTCTTT+TGG 0.186478 1_4:+68307828 None:intergenic
CCAAAAGAGGCATGCAAATT+TGG 0.194765 1_4:-68307828 Msa0180440:three_prime_UTR
CCAGCTGACATTTATGTTCT+TGG 0.223313 1_4:-68311636 Msa0180440:CDS
CATTTCCCATATACCGAAAA+AGG 0.224239 1_4:-68308525 Msa0180440:intron
GTAAAATCCCTATTGGTAAA+AGG 0.226517 1_4:+68308591 None:intergenic
CTAGTTTAAGATGGGGTTAT+AGG 0.246789 1_4:-68310955 Msa0180440:CDS
TCTTGTTCTCTCTTATTTAT+GGG 0.253835 1_4:-68312678 Msa0180440:five_prime_UTR
CACTTGTTGAGATGCAAAAT+TGG 0.283420 1_4:-68309945 Msa0180440:CDS
ATTAATGTAGTCGAATTATA+TGG 0.291644 1_4:-68310017 Msa0180440:intron
CAGTTTATAATCTCTAGTTT+TGG 0.300310 1_4:-68308414 Msa0180440:three_prime_UTR
TTAGGAGGTGAGGTTGAATA+TGG 0.311008 1_4:-68312085 Msa0180440:intron
GCTCTCATGGTCAAAGAAAA+TGG 0.317894 1_4:-68312324 Msa0180440:CDS
CTTCAAAGTAAAATCCCTAT+TGG 0.318880 1_4:+68308584 None:intergenic
CGCGAACATAAGACAATTGA+TGG 0.333710 1_4:+68309516 None:intergenic
ATAGAAAAGGTACTTGAATA+TGG 0.334170 1_4:+68309294 None:intergenic
ATGAAGTAGAAGTGTCAAAA+TGG 0.334431 1_4:-68312473 Msa0180440:exon
ATAGGTGTGACCGTATTCTA+TGG 0.336360 1_4:-68309553 Msa0180440:intron
TTTCCACTTTAACAATCATT+AGG 0.342462 1_4:-68308319 Msa0180440:intron
TCAGTATATCCACCGGAATA+TGG 0.344859 1_4:+68309365 None:intergenic
GCTATATCCATCTTCATTAG+AGG 0.346736 1_4:+68310793 None:intergenic
AAAGGGAATGATTCAAGAAA+TGG 0.349039 1_4:+68312001 None:intergenic
GATGGGATATCTAGGAAATA+AGG 0.356770 1_4:-68310639 Msa0180440:intron
CCAGACAACTTCTAGTGGTT+GGG 0.363056 1_4:-68311077 Msa0180440:CDS
TTTCATGGAGGGAGATAGAT+AGG 0.366271 1_4:-68308555 Msa0180440:three_prime_UTR
GAAGAACTTCTGCCATATTC+CGG 0.366341 1_4:-68309377 Msa0180440:CDS
GGCTTGGAGATTTGAATTAT+CGG 0.367306 1_4:-68309996 Msa0180440:CDS
CCACTACTTCCACTGGTTCC+AGG 0.367772 1_4:+68311205 None:intergenic
TCTACAACTGGCTGAGGAAT+TGG 0.371098 1_4:+68311166 None:intergenic
ACAAGGTTTCCTCGTGTTCA+TGG 0.380420 1_4:-68310361 Msa0180440:CDS
TAAAATCCCTATTGGTAAAA+GGG 0.382265 1_4:+68308592 None:intergenic
CAGCTGACATTTATGTTCTT+GGG 0.385507 1_4:-68311635 Msa0180440:intron
TGAAATATCAGAAGCTGGCT+TGG 0.397750 1_4:-68312524 Msa0180440:five_prime_UTR
TTAGTTGAATACTTGTAAGT+TGG 0.398251 1_4:+68309750 None:intergenic
TTACCTAATGATTGTTAAAG+TGG 0.404122 1_4:+68308316 None:intergenic
AAGACATTAAACAATCTTCC+TGG 0.405151 1_4:-68311223 Msa0180440:CDS
GTAATTTGAGTGTAGATGAT+TGG 0.405806 1_4:-68311674 Msa0180440:CDS
TGATCATACTATCATATGTT+AGG 0.407207 1_4:+68308384 None:intergenic
TTATCGATGTGCAGAACTAT+AGG 0.428465 1_4:-68311827 Msa0180440:intron
ATACCATCAAGAACTTCAAA+AGG 0.434223 1_4:+68311983 None:intergenic
GTTGAATACTTGTAAGTTGG+AGG 0.434410 1_4:+68309753 None:intergenic
AAGAAGAAATTCTGATGTAA+TGG 0.434526 1_4:-68310398 Msa0180440:CDS
CTCTGCCCCTAGGATATTAC+CGG 0.436957 1_4:+68311285 None:intergenic
GCCCAAAATATGCCATAAAC+AGG 0.437361 1_4:+68309467 None:intergenic
CATCAATTGTCTTATGTTCG+CGG 0.437643 1_4:-68309515 Msa0180440:CDS
ACTTTGAAGAAATACTTTCA+TGG 0.442657 1_4:-68308570 Msa0180440:three_prime_UTR
ATCTGCAGTCATTTAACCTC+AGG 0.444290 1_4:-68310442 Msa0180440:CDS
ATAGGCCTAGTGACTATTCA+AGG 0.450945 1_4:-68310937 Msa0180440:CDS
ACTTTGATCCTAGTTTAAGA+TGG 0.450999 1_4:-68310964 Msa0180440:CDS
TTGAATGCCGGTAATATCCT+AGG 0.455415 1_4:-68311292 Msa0180440:CDS
CCCAACCACTAGAAGTTGTC+TGG 0.456209 1_4:+68311077 None:intergenic
GCAGGAGCACGAGTCAAGTT+AGG 0.456785 1_4:-68311881 Msa0180440:CDS
TGAAGTAGAAGTGTCAAAAT+GGG 0.458973 1_4:-68312472 Msa0180440:exon
TTTAACCTCAGGACAGAAAG+AGG 0.459850 1_4:-68310431 Msa0180440:CDS
AGAGGATTGATGGGATATCT+AGG 0.460059 1_4:-68310647 Msa0180440:CDS
TATTCACCGATGTCCACTAA+TGG 0.460168 1_4:-68310824 Msa0180440:CDS
CTTTGATCCTAGTTTAAGAT+GGG 0.463958 1_4:-68310963 Msa0180440:CDS
GAAATATCAGAAGCTGGCTT+GGG 0.468557 1_4:-68312523 Msa0180440:five_prime_UTR
AGTATTTAAGAAACCAAAAG+AGG 0.469725 1_4:-68307841 Msa0180440:three_prime_UTR
TGTAGTCGAATTATATGGCT+TGG 0.470661 1_4:-68310012 Msa0180440:intron
TTCTCAGTCAAGAATTGAGT+TGG 0.478219 1_4:-68309399 Msa0180440:CDS
GTGTGTTGGCAGAGGATTGA+TGG 0.485090 1_4:-68310657 Msa0180440:CDS
GTTTGATGAATTAGCTCTCA+TGG 0.485296 1_4:-68312337 Msa0180440:intron
AGTATAATTGAGTAAAGAAA+AGG 0.485984 1_4:-68308024 Msa0180440:three_prime_UTR
AGAATTCGTCTTTCTTCCAC+AGG 0.487504 1_4:-68311108 Msa0180440:CDS
GTAGCTACATGGAATGTAGC+TGG 0.489460 1_4:-68311711 Msa0180440:CDS
TCCAGACAACTTCTAGTGGT+TGG 0.491468 1_4:-68311078 Msa0180440:CDS
ATCACCCTCTTTCTGTCCTG+AGG 0.491996 1_4:+68310426 None:intergenic
CTACACTCAAATTACTTGGT+GGG 0.495753 1_4:+68311682 None:intergenic
TCATCTACACTCAAATTACT+TGG 0.496940 1_4:+68311678 None:intergenic
CTATAACCCCATCTTAAACT+AGG 0.499596 1_4:+68310956 None:intergenic
TCTGCATTCAGCTCTACAAC+TGG 0.501429 1_4:+68311154 None:intergenic
ATCACTGAAATATCAGAAGC+TGG 0.504559 1_4:-68312529 Msa0180440:five_prime_UTR
CCTCGTTGCAAGTAAGCAAA+TGG 0.505118 1_4:-68310747 Msa0180440:CDS
GAAGATGGATATAGCATGCC+AGG 0.505717 1_4:-68310785 Msa0180440:CDS
TGTGACCGTATTCTATGGTA+TGG 0.505817 1_4:-68309548 Msa0180440:CDS
CCCCATCTTGAATAGTCACT+TGG 0.508310 1_4:+68310896 None:intergenic
CGCCTTTCACCCATACGGTA+AGG 0.509680 1_4:+68310714 None:intergenic
GTGAGGTTGAATATGGAAGT+AGG 0.510611 1_4:-68312078 Msa0180440:CDS
GGGAGGTGTAGAAACTTGCT+TGG 0.510701 1_4:-68312503 Msa0180440:five_prime_UTR
GGAGGTGTAGAAACTTGCTT+GGG 0.511972 1_4:-68312502 Msa0180440:five_prime_UTR
CAGACAACTTCTAGTGGTTG+GGG 0.516388 1_4:-68311076 Msa0180440:CDS
TGTGAACAGAGAAGTTTAGC+AGG 0.521211 1_4:-68311899 Msa0180440:intron
AACTTCTAGTGGTTGGGGAA+TGG 0.521620 1_4:-68311071 Msa0180440:CDS
CTTCTCCATACCATAGAATA+CGG 0.523333 1_4:+68309543 None:intergenic
AAAAGGTACTTGAATATGGA+TGG 0.524120 1_4:+68309298 None:intergenic
TGGGAATCTACCTTACCGTA+TGG 0.527175 1_4:-68310724 Msa0180440:CDS
AGAGGCAGATCCACCATTAG+TGG 0.529627 1_4:+68310811 None:intergenic
GGATCTGCCTCTAATGAAGA+TGG 0.530173 1_4:-68310800 Msa0180440:CDS
TCTCTCCTACCGCTCTGCTA+AGG 0.532367 1_4:-68309968 Msa0180440:CDS
TACCTTACCGTATGGGTGAA+AGG 0.532707 1_4:-68310716 Msa0180440:CDS
TACCATCAAGAACTTCAAAA+GGG 0.533252 1_4:+68311984 None:intergenic
ACCAAGTGACTATTCAAGAT+GGG 0.537065 1_4:-68310897 Msa0180440:CDS
AAAGAGGCATGCAAATTTGG+CGG 0.537226 1_4:-68307825 None:intergenic
AAGAGGCATGCAAATTTGGC+GGG 0.538372 1_4:-68307824 None:intergenic
TATGCAGGTAGTTGATGAAG+AGG 0.542759 1_4:-68308208 Msa0180440:intron
GACCAAGTGACTATTCAAGA+TGG 0.545416 1_4:-68310898 Msa0180440:CDS
AACAAGGAAACAAATGAACT+TGG 0.546436 1_4:-68312573 Msa0180440:five_prime_UTR
AAGTGCCTTAGCAGAGCGGT+AGG 0.547515 1_4:+68309963 None:intergenic
CTTGCCCTTGAATAGTCACT+AGG 0.549171 1_4:+68310932 None:intergenic
AGGCAGTACCTTGAATGTCC+TGG 0.550535 1_4:+68310767 None:intergenic
CGGTAATATCCTAGGGGCAG+AGG 0.551227 1_4:-68311284 Msa0180440:CDS
TGAAGAAATACTTTCATGGA+GGG 0.552511 1_4:-68308566 Msa0180440:three_prime_UTR
TACACTCAAATTACTTGGTG+GGG 0.552545 1_4:+68311683 None:intergenic
GGCCATTGTCCTCTGCCCCT+AGG 0.552956 1_4:+68311275 None:intergenic
CAGTTCGCCTTTCACCCATA+CGG 0.553302 1_4:+68310709 None:intergenic
CTGTATCTTCGATCAACTTG+TGG 0.554421 1_4:+68311025 None:intergenic
AGAGCTGAATGCAGATTTCG+AGG 0.555270 1_4:-68311146 Msa0180440:CDS
TCTACACTCAAATTACTTGG+TGG 0.557302 1_4:+68311681 None:intergenic
TTCTGCACATCGATAATTCG+AGG 0.557659 1_4:+68311834 None:intergenic
ATATCAGAAGCTGGCTTGGG+AGG 0.558210 1_4:-68312520 Msa0180440:five_prime_UTR
GAGATAGTTCCGTTGAATGC+CGG 0.558858 1_4:-68311304 Msa0180440:CDS
AAAGTATCGTGTGTTGGCAG+AGG 0.561574 1_4:-68310665 Msa0180440:CDS
CCAAGAACATAAATGTCAGC+TGG 0.562731 1_4:+68311636 None:intergenic
TAGAACAAGACAATGCAGTA+AGG 0.564196 1_4:+68312754 None:intergenic
ATAGCATGCCAGGACATTCA+AGG 0.564632 1_4:-68310775 Msa0180440:CDS
ATGTGATAATCTTACCAAGC+AGG 0.565102 1_4:+68309675 None:intergenic
CACAGACATACTAATTGAGA+TGG 0.566006 1_4:+68310486 None:intergenic
TTCAGCTCTACAACTGGCTG+AGG 0.570219 1_4:+68311160 None:intergenic
AAAATCCCTATTGGTAAAAG+GGG 0.570576 1_4:+68308593 None:intergenic
AGGATATTACCGGCATTCAA+CGG 0.574425 1_4:+68311295 None:intergenic
CCTGGAACCAGTGGAAGTAG+TGG 0.574999 1_4:-68311205 Msa0180440:CDS
AACAATCTTCCTGGAACCAG+TGG 0.576589 1_4:-68311214 Msa0180440:CDS
GGTGTAGAAACTTGCTTGGG+AGG 0.577053 1_4:-68312499 Msa0180440:five_prime_UTR
ACTAATTCAGATCGATACTC+AGG 0.577073 1_4:-68309732 Msa0180440:CDS
GTTTAGTTCAGTATATCCAC+CGG 0.581440 1_4:+68309358 None:intergenic
CGTTGCAAGTAAGCAAATGG+TGG 0.581706 1_4:-68310744 Msa0180440:CDS
ATAACATCCACTACTTCCAC+TGG 0.583435 1_4:+68311198 None:intergenic
TGAATGCCGGTAATATCCTA+GGG 0.584511 1_4:-68311291 Msa0180440:CDS
GGGAATCTACCTTACCGTAT+GGG 0.584626 1_4:-68310723 Msa0180440:CDS
CGTTCCATCCCACAAAAGCT+CGG 0.585491 1_4:+68309793 None:intergenic
ACTTGTGGTTGCACAAGTGA+AGG 0.585723 1_4:+68311040 None:intergenic
TCCGTGAGGTGACTCAACCT+CGG 0.588228 1_4:+68309445 None:intergenic
CGTATTCTATGGTATGGAGA+AGG 0.589620 1_4:-68309542 Msa0180440:CDS
GGTGAATATAAGACGGTACT+CGG 0.592451 1_4:+68310839 None:intergenic
AACATGAAAGTATCGTGTGT+TGG 0.596159 1_4:-68310671 Msa0180440:CDS
GCAGATGCTGTTGTTTATGG+AGG 0.601488 1_4:-68312257 Msa0180440:intron
AAACTAGGATCAAAGTCACT+AGG 0.603336 1_4:+68310971 None:intergenic
TTCATGGAGGGAGATAGATA+GGG 0.606427 1_4:-68308554 Msa0180440:three_prime_UTR
TCACCGATGTCCACTAATGG+TGG 0.611075 1_4:-68310821 Msa0180440:CDS
AGCACTTTAAGAATAATGCA+TGG 0.611704 1_4:+68312703 None:intergenic
TTGTCTGGAACGATCGCCTG+TGG 0.616385 1_4:+68311092 None:intergenic
TTTGATCCTAGTTTAAGATG+GGG 0.618992 1_4:-68310962 Msa0180440:CDS
GCCGAGGTTGAGTCACCTCA+CGG 0.620878 1_4:-68309446 Msa0180440:CDS
GAGCTGAATGCAGATTTCGA+GGG 0.621883 1_4:-68311145 Msa0180440:CDS
ATCCTAGGGGCAGAGGACAA+TGG 0.622061 1_4:-68311277 Msa0180440:CDS
TTGTCAACGCCATGAACACG+AGG 0.624907 1_4:+68310352 None:intergenic
CAGATTTCGAGGGATCAGCT+AGG 0.626550 1_4:-68311135 Msa0180440:CDS
AAAGAAGGGAAGATTGAACA+AGG 0.626562 1_4:-68309328 Msa0180440:three_prime_UTR
ATAAATGTCAGCTGGTGGTG+AGG 0.628782 1_4:+68311644 None:intergenic
TTGAAGAAATACTTTCATGG+AGG 0.628992 1_4:-68308567 Msa0180440:three_prime_UTR
GTTGCAAGTAAGCAAATGGT+GGG 0.629979 1_4:-68310743 Msa0180440:CDS
GCACATCGATAATTCGAGGA+TGG 0.631089 1_4:+68311838 None:intergenic
TGATGATGACAATGGCCTTG+TGG 0.631802 1_4:-68310867 Msa0180440:CDS
AGCACGAGTCAAGTTAGGCG+AGG 0.638693 1_4:-68311876 Msa0180440:CDS
ATATGCCATAAACAGGTCTG+TGG 0.638756 1_4:+68309474 None:intergenic
AGGAGATGATATGCACCCCA+AGG 0.644054 1_4:-68309712 Msa0180440:CDS
GCACTCACAAGAAGAAAACA+AGG 0.646186 1_4:-68312589 Msa0180440:five_prime_UTR
AAGACTCTTACTCGTGCTCG+AGG 0.646419 1_4:+68310308 None:intergenic
TGTGTTGGCAGAGGATTGAT+GGG 0.651992 1_4:-68310656 Msa0180440:CDS
TAGGCCTAGTGACTATTCAA+GGG 0.652233 1_4:-68310936 Msa0180440:CDS
CCAAGTGACTATTCAAGATG+GGG 0.653125 1_4:-68310896 Msa0180440:CDS
CGGTACTCGGTGAATCCACA+AGG 0.653743 1_4:+68310852 None:intergenic
TCGTTCCAGACAACTTCTAG+TGG 0.655270 1_4:-68311082 Msa0180440:CDS
GAACTTCTGCCATATTCCGG+TGG 0.669521 1_4:-68309374 Msa0180440:CDS
TTAACCTCAGGACAGAAAGA+GGG 0.672945 1_4:-68310430 Msa0180440:CDS
AGAACATAAATGTCAGCTGG+TGG 0.673457 1_4:+68311639 None:intergenic
ACTGGCTGAGGAATTGGAGA+CGG 0.681528 1_4:+68311172 None:intergenic
GGACATCGGTGAATATAAGA+CGG 0.682139 1_4:+68310832 None:intergenic
GATCCACCATTAGTGGACAT+CGG 0.683487 1_4:+68310818 None:intergenic
CCATTTGCTTACTTGCAACG+AGG 0.692457 1_4:+68310747 None:intergenic
TCGTGCTCGAGGATTGTCTG+AGG 0.692935 1_4:+68310319 None:intergenic
CAACAAGTGCCTTAGCAGAG+CGG 0.698793 1_4:+68309959 None:intergenic
AAGAAGGGAAGATTGAACAA+GGG 0.703067 1_4:-68309327 Msa0180440:three_prime_UTR
TGAGAATTCCAAGAACACCA+AGG 0.705085 1_4:-68312446 Msa0180440:intron
GGTTCGTCTGATGATGACAA+TGG 0.726292 1_4:-68310875 Msa0180440:CDS
GAATGCCGGTAATATCCTAG+GGG 0.756791 1_4:-68311290 Msa0180440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCAATATTTTATTATGT+TGG - chr1_4:68308207-68308226 Msa0180440:intron 10.0%
!!! TTATTTTATAAAATCCTATT+AGG + chr1_4:68310962-68310981 None:intergenic 10.0%
!!! ATGAACATTTTTATTTTTAT+AGG - chr1_4:68311038-68311057 Msa0180440:CDS 10.0%
!!! TTTATTTTTCTTGGTAAAAT+TGG + chr1_4:68308820-68308839 None:intergenic 15.0%
!! TCTAAAGAAAAACAAAAATT+AGG + chr1_4:68310023-68310042 None:intergenic 15.0%
!!! CTTTAGAGTAATTTATTTTA+TGG - chr1_4:68310036-68310055 Msa0180440:intron 15.0%
!!! AATTTTATAAAGAAAAGCTT+GGG + chr1_4:68311507-68311526 None:intergenic 15.0%
!! ATAATAATTGTCAAAAACCT+TGG + chr1_4:68308183-68308202 None:intergenic 20.0%
!! AACAATTCATATTCTTCAAT+TGG - chr1_4:68308427-68308446 Msa0180440:intron 20.0%
!! TATAGATTACTACAATTTCT+TGG - chr1_4:68308468-68308487 Msa0180440:intron 20.0%
!!! TTATTTTATGGTGAAAATGA+TGG - chr1_4:68310048-68310067 Msa0180440:intron 20.0%
!! ATTAATGTAGTCGAATTATA+TGG - chr1_4:68310592-68310611 Msa0180440:intron 20.0%
!! TAACTTAAACAATAAACATG+AGG + chr1_4:68310740-68310759 None:intergenic 20.0%
!!! AACTAAACTTTTTCTAAAGA+AGG - chr1_4:68311266-68311285 Msa0180440:CDS 20.0%
!!! ACTAAACTTTTTCTAAAGAA+GGG - chr1_4:68311267-68311286 Msa0180440:CDS 20.0%
!!! TAATCATGATTTTAAGATAG+TGG - chr1_4:68311354-68311373 Msa0180440:intron 20.0%
!!! CAATTTTATAAAGAAAAGCT+TGG + chr1_4:68311508-68311527 None:intergenic 20.0%
!!! GCTTTTCTTTATAAAATTGT+TGG - chr1_4:68311509-68311528 Msa0180440:intron 20.0%
!! ATCATATAGGTATATTCTTT+AGG + chr1_4:68311639-68311658 None:intergenic 20.0%
!!! ATTGATTTCATGAAATTGAA+AGG - chr1_4:68311832-68311851 Msa0180440:CDS 20.0%
!!! CAGTTATTTTTTTATTATGC+AGG - chr1_4:68312386-68312405 Msa0180440:intron 20.0%
!! AGTATAATTGAGTAAAGAAA+AGG - chr1_4:68312585-68312604 Msa0180440:five_prime_UTR 20.0%
!!! AATTTTTGTACTGATAAAGT+TGG - chr1_4:68312687-68312706 Msa0180440:five_prime_UTR 20.0%
!!! AACTCTTCTTTTTACTAATA+AGG - chr1_4:68312734-68312753 Msa0180440:five_prime_UTR 20.0%
!! TTCTTGTTCTCTCTTATTTA+TGG - chr1_4:68307930-68307949 Msa0180440:three_prime_UTR 25.0%
!! TCTTGTTCTCTCTTATTTAT+GGG - chr1_4:68307931-68307950 Msa0180440:three_prime_UTR 25.0%
! AAACAGTAACTGAGTTTATT+TGG + chr1_4:68308497-68308516 None:intergenic 25.0%
! ACTTGTGCAAATGTAAATAT+CGG + chr1_4:68308670-68308689 None:intergenic 25.0%
!!! TATACGGTTTTGTAATTTGT+AGG - chr1_4:68309145-68309164 Msa0180440:intron 25.0%
! AATTTGTAGGACTAAAAAGT+TGG - chr1_4:68309158-68309177 Msa0180440:intron 25.0%
!!! AATATGAGAGTTATTTTGGT+TGG - chr1_4:68310087-68310106 Msa0180440:intron 25.0%
! AAGAAGAAATTCTGATGTAA+TGG - chr1_4:68310211-68310230 Msa0180440:intron 25.0%
! TGACTACTTATATTAGTGTT+TGG - chr1_4:68310388-68310407 Msa0180440:CDS 25.0%
! ATTAACCATTAGTTATTCTG+TGG + chr1_4:68310449-68310468 None:intergenic 25.0%
! AACAATAAACATGAGGTTAA+TGG + chr1_4:68310733-68310752 None:intergenic 25.0%
! TTAGTTGAATACTTGTAAGT+TGG + chr1_4:68310862-68310881 None:intergenic 25.0%
! AAAAATGTTCATGTCTTCAT+AGG + chr1_4:68311030-68311049 None:intergenic 25.0%
!!! ATAGAAAAGGTACTTGAATA+TGG + chr1_4:68311318-68311337 None:intergenic 25.0%
! ATGATTATGAGAGTCTATAA+GGG + chr1_4:68311341-68311360 None:intergenic 25.0%
! AAAAACAAAAAACTATGTGC+AGG - chr1_4:68311446-68311465 Msa0180440:intron 25.0%
! ACTAATGTCAAAGATCATAT+AGG + chr1_4:68311652-68311671 None:intergenic 25.0%
!! ACTTTTTACATAAGCTATCT+TGG + chr1_4:68311797-68311816 None:intergenic 25.0%
! TAAAATCCCTATTGGTAAAA+GGG + chr1_4:68312020-68312039 None:intergenic 25.0%
!! ACTTTGAAGAAATACTTTCA+TGG - chr1_4:68312039-68312058 Msa0180440:CDS 25.0%
!! GAAGAAAAACTAACCTTTTT+CGG + chr1_4:68312100-68312119 None:intergenic 25.0%
! CAAAATTAGACAAAGAAATG+AGG + chr1_4:68312157-68312176 None:intergenic 25.0%
! AACTGAAAAAGATAAAGTGA+AGG + chr1_4:68312180-68312199 None:intergenic 25.0%
!!! CAGTTTATAATCTCTAGTTT+TGG - chr1_4:68312195-68312214 Msa0180440:intron 25.0%
! TGATCATACTATCATATGTT+AGG + chr1_4:68312228-68312247 None:intergenic 25.0%
!! AACTCAAGTGTTTGTTAATT+TGG + chr1_4:68312272-68312291 None:intergenic 25.0%
! TTTCCACTTTAACAATCATT+AGG - chr1_4:68312290-68312309 Msa0180440:CDS 25.0%
! TTACCTAATGATTGTTAAAG+TGG + chr1_4:68312296-68312315 None:intergenic 25.0%
! AGTATTTAAGAAACCAAAAG+AGG - chr1_4:68312768-68312787 Msa0180440:five_prime_UTR 25.0%
! AGCACTTTAAGAATAATGCA+TGG + chr1_4:68307909-68307928 None:intergenic 30.0%
AACAAGGAAACAAATGAACT+TGG - chr1_4:68308036-68308055 Msa0180440:three_prime_UTR 30.0%
!! ATGAAGTAGAAGTGTCAAAA+TGG - chr1_4:68308136-68308155 Msa0180440:three_prime_UTR 30.0%
!! TGAAGTAGAAGTGTCAAAAT+GGG - chr1_4:68308137-68308156 Msa0180440:three_prime_UTR 30.0%
! AGTTACTGTTTTCCTTCTTT+AGG - chr1_4:68308506-68308525 Msa0180440:intron 30.0%
ACAATCAAAAAGAGCAAAAC+AGG - chr1_4:68308581-68308600 Msa0180440:three_prime_UTR 30.0%
AAAGGGAATGATTCAAGAAA+TGG + chr1_4:68308611-68308630 None:intergenic 30.0%
TACCATCAAGAACTTCAAAA+GGG + chr1_4:68308628-68308647 None:intergenic 30.0%
ATACCATCAAGAACTTCAAA+AGG + chr1_4:68308629-68308648 None:intergenic 30.0%
TCATCTACACTCAAATTACT+TGG + chr1_4:68308934-68308953 None:intergenic 30.0%
GTAATTTGAGTGTAGATGAT+TGG - chr1_4:68308935-68308954 Msa0180440:intron 30.0%
TGAAGTTGGCATTAATTGTT+CGG - chr1_4:68309034-68309053 Msa0180440:intron 30.0%
AAGACATTAAACAATCTTCC+TGG - chr1_4:68309386-68309405 Msa0180440:CDS 30.0%
ACTTTGATCCTAGTTTAAGA+TGG - chr1_4:68309645-68309664 Msa0180440:intron 30.0%
! CTTTGATCCTAGTTTAAGAT+GGG - chr1_4:68309646-68309665 Msa0180440:intron 30.0%
! TTTGATCCTAGTTTAAGATG+GGG - chr1_4:68309647-68309666 Msa0180440:intron 30.0%
! GGCTAATATGAGAGTTATTT+TGG - chr1_4:68310083-68310102 Msa0180440:intron 30.0%
!!! TTATTTTGGTTGGATTTTGC+AGG - chr1_4:68310097-68310116 Msa0180440:intron 30.0%
!!! TATTTTGGTTGGATTTTGCA+GGG - chr1_4:68310098-68310117 Msa0180440:intron 30.0%
TGGAGATTCTTAAAAAGACA+AGG - chr1_4:68310231-68310250 Msa0180440:intron 30.0%
AAGATCCACAGAATAACTAA+TGG - chr1_4:68310441-68310460 Msa0180440:CDS 30.0%
TGTCATAGTATCAACAGTTA+AGG + chr1_4:68310772-68310791 None:intergenic 30.0%
TTGAGAATAGAGCAAAAAAG+AGG - chr1_4:68310793-68310812 Msa0180440:CDS 30.0%
AGATTATCACATCACCTAAT+AGG - chr1_4:68310945-68310964 Msa0180440:CDS 30.0%
! ACCTGTTTATGGCATATTTT+GGG - chr1_4:68311141-68311160 Msa0180440:CDS 30.0%
!! AAAAGGTACTTGAATATGGA+TGG + chr1_4:68311314-68311333 None:intergenic 30.0%
CATGATTATGAGAGTCTATA+AGG + chr1_4:68311342-68311361 None:intergenic 30.0%
AACATAATAGAGTGGAATAG+TGG - chr1_4:68311583-68311602 Msa0180440:intron 30.0%
AAAATCCCTATTGGTAAAAG+GGG + chr1_4:68312019-68312038 None:intergenic 30.0%
GTAAAATCCCTATTGGTAAA+AGG + chr1_4:68312021-68312040 None:intergenic 30.0%
CTTCAAAGTAAAATCCCTAT+TGG + chr1_4:68312028-68312047 None:intergenic 30.0%
TTGAAGAAATACTTTCATGG+AGG - chr1_4:68312042-68312061 Msa0180440:CDS 30.0%
TGAAGAAATACTTTCATGGA+GGG - chr1_4:68312043-68312062 Msa0180440:CDS 30.0%
!! TTTTTCGGTATATGGGAAAT+GGG + chr1_4:68312085-68312104 None:intergenic 30.0%
!!! ACTAACCTTTTTCGGTATAT+GGG + chr1_4:68312092-68312111 None:intergenic 30.0%
!!! AACTAACCTTTTTCGGTATA+TGG + chr1_4:68312093-68312112 None:intergenic 30.0%
!! ATGAGAGTTTTGATGTATAG+TGG - chr1_4:68312551-68312570 Msa0180440:five_prime_UTR 30.0%
TAGAACAAGACAATGCAGTA+AGG + chr1_4:68307858-68307877 None:intergenic 35.0%
ATCACTGAAATATCAGAAGC+TGG - chr1_4:68308080-68308099 Msa0180440:three_prime_UTR 35.0%
! GTTTGATGAATTAGCTCTCA+TGG - chr1_4:68308272-68308291 Msa0180440:intron 35.0%
! TACTGTTTTCCTTCTTTAGG+AGG - chr1_4:68308509-68308528 Msa0180440:intron 35.0%
!! TTGCTCTTTTTGATTGTGCA+TGG + chr1_4:68308578-68308597 None:intergenic 35.0%
!!! TTCCCTTTTGAAGTTCTTGA+TGG - chr1_4:68308623-68308642 Msa0180440:intron 35.0%
TGTGCAAATGTAAATATCGG+CGG + chr1_4:68308667-68308686 None:intergenic 35.0%
TTATCGATGTGCAGAACTAT+AGG - chr1_4:68308782-68308801 Msa0180440:intron 35.0%
CTTGGTAAAATTGGAGAAGT+AGG + chr1_4:68308811-68308830 None:intergenic 35.0%
! TACACTCAAATTACTTGGTG+GGG + chr1_4:68308929-68308948 None:intergenic 35.0%
CTACACTCAAATTACTTGGT+GGG + chr1_4:68308930-68308949 None:intergenic 35.0%
TCTACACTCAAATTACTTGG+TGG + chr1_4:68308931-68308950 None:intergenic 35.0%
CAGCTGACATTTATGTTCTT+GGG - chr1_4:68308974-68308993 Msa0180440:intron 35.0%
TTATAGTCTTCTCCTGAAGT+TGG - chr1_4:68309020-68309039 Msa0180440:intron 35.0%
GAACAATTAATGCCAACTTC+AGG + chr1_4:68309035-68309054 None:intergenic 35.0%
GAGACTTGTAAGTGTGTATA+GGG + chr1_4:68309108-68309127 None:intergenic 35.0%
AGAGACTTGTAAGTGTGTAT+AGG + chr1_4:68309109-68309128 None:intergenic 35.0%
! ACACTTACAAGTCTCTAAAG+AGG - chr1_4:68309113-68309132 Msa0180440:intron 35.0%
! CACTTACAAGTCTCTAAAGA+GGG - chr1_4:68309114-68309133 Msa0180440:intron 35.0%
AAAGAGGGACAACAAGTATA+CGG - chr1_4:68309129-68309148 Msa0180440:intron 35.0%
!! TAGGACTAAAAAGTTGGTAC+AGG - chr1_4:68309164-68309183 Msa0180440:intron 35.0%
!! AGGACTAAAAAGTTGGTACA+GGG - chr1_4:68309165-68309184 Msa0180440:intron 35.0%
GTCATTCGTAAAGCAGTTAA+GGG + chr1_4:68309240-68309259 None:intergenic 35.0%
TGTCATTCGTAAAGCAGTTA+AGG + chr1_4:68309241-68309260 None:intergenic 35.0%
TCTTGAAATCTGCAAGAGAA+AGG + chr1_4:68309287-68309306 None:intergenic 35.0%
!!! GATAAGAGCCAACCATTTTT+TGG + chr1_4:68309363-68309382 None:intergenic 35.0%
! GTTTGCGATCGTGTAATTTT+CGG - chr1_4:68309608-68309627 Msa0180440:intron 35.0%
! ATCGTGTAATTTTCGGTAAC+AGG - chr1_4:68309615-68309634 Msa0180440:intron 35.0%
AAACTAGGATCAAAGTCACT+AGG + chr1_4:68309641-68309660 None:intergenic 35.0%
CTATAACCCCATCTTAAACT+AGG + chr1_4:68309656-68309675 None:intergenic 35.0%
! CTAGTTTAAGATGGGGTTAT+AGG - chr1_4:68309654-68309673 Msa0180440:intron 35.0%
ACCAAGTGACTATTCAAGAT+GGG - chr1_4:68309712-68309731 Msa0180440:CDS 35.0%
GCTATATCCATCTTCATTAG+AGG + chr1_4:68309819-68309838 None:intergenic 35.0%
!! AACATGAAAGTATCGTGTGT+TGG - chr1_4:68309938-68309957 Msa0180440:CDS 35.0%
GATGGGATATCTAGGAAATA+AGG - chr1_4:68309970-68309989 Msa0180440:CDS 35.0%
AAATGATGGTTGCTTAGGAT+TGG - chr1_4:68310062-68310081 Msa0180440:intron 35.0%
!!! ATTTTGGTTGGATTTTGCAG+GGG - chr1_4:68310099-68310118 Msa0180440:intron 35.0%
CACAGACATACTAATTGAGA+TGG + chr1_4:68310126-68310145 None:intergenic 35.0%
TGTAGTCGAATTATATGGCT+TGG - chr1_4:68310597-68310616 Msa0180440:intron 35.0%
GGCTTGGAGATTTGAATTAT+CGG - chr1_4:68310613-68310632 Msa0180440:intron 35.0%
! CACTTGTTGAGATGCAAAAT+TGG - chr1_4:68310664-68310683 Msa0180440:CDS 35.0%
! GTTGAATACTTGTAAGTTGG+AGG + chr1_4:68310859-68310878 None:intergenic 35.0%
ACTAATTCAGATCGATACTC+AGG - chr1_4:68310877-68310896 Msa0180440:CDS 35.0%
ATGTGATAATCTTACCAAGC+AGG + chr1_4:68310937-68310956 None:intergenic 35.0%
CTTCTCCATACCATAGAATA+CGG + chr1_4:68311069-68311088 None:intergenic 35.0%
CATCAATTGTCTTATGTTCG+CGG - chr1_4:68311094-68311113 Msa0180440:CDS 35.0%
! GACCTGTTTATGGCATATTT+TGG - chr1_4:68311140-68311159 Msa0180440:CDS 35.0%
! CTTTTCTTCAATTTTCCGTG+AGG + chr1_4:68311181-68311200 None:intergenic 35.0%
TTCTCAGTCAAGAATTGAGT+TGG - chr1_4:68311210-68311229 Msa0180440:CDS 35.0%
! GTTTAGTTCAGTATATCCAC+CGG + chr1_4:68311254-68311273 None:intergenic 35.0%
AAAGAAGGGAAGATTGAACA+AGG - chr1_4:68311281-68311300 Msa0180440:CDS 35.0%
AAGAAGGGAAGATTGAACAA+GGG - chr1_4:68311282-68311301 Msa0180440:CDS 35.0%
GAGTCTATAAGGGATAGAAA+AGG + chr1_4:68311331-68311350 None:intergenic 35.0%
! ACCAAAAGTACAAGATTCTG+AGG - chr1_4:68311536-68311555 Msa0180440:intron 35.0%
! GAGGCTGTAACTGATTTATA+TGG - chr1_4:68311555-68311574 Msa0180440:intron 35.0%
TGGACTTGAACATAATAGAG+TGG - chr1_4:68311575-68311594 Msa0180440:intron 35.0%
AAGCTATCTTGGAGAGTTAA+TGG + chr1_4:68311786-68311805 None:intergenic 35.0%
!!! CCATTTTCTGAAACAGTAAC+AGG + chr1_4:68311995-68312014 None:intergenic 35.0%
CCTGTTACTGTTTCAGAAAA+TGG - chr1_4:68311992-68312011 Msa0180440:CDS 35.0%
!!! CTTTTTCGGTATATGGGAAA+TGG + chr1_4:68312086-68312105 None:intergenic 35.0%
CATTTCCCATATACCGAAAA+AGG - chr1_4:68312084-68312103 Msa0180440:CDS 35.0%
GCACTCACAAGAAGAAAACA+AGG - chr1_4:68308020-68308039 Msa0180440:three_prime_UTR 40.0%
TGAAATATCAGAAGCTGGCT+TGG - chr1_4:68308085-68308104 Msa0180440:three_prime_UTR 40.0%
! GAAATATCAGAAGCTGGCTT+GGG - chr1_4:68308086-68308105 Msa0180440:three_prime_UTR 40.0%
TGAGAATTCCAAGAACACCA+AGG - chr1_4:68308163-68308182 Msa0180440:three_prime_UTR 40.0%
!! GTCAAAAACCTTGGTGTTCT+TGG + chr1_4:68308174-68308193 None:intergenic 40.0%
GCTCTCATGGTCAAAGAAAA+TGG - chr1_4:68308285-68308304 Msa0180440:intron 40.0%
! CAAGCAGATGCTGTTGTTTA+TGG - chr1_4:68308349-68308368 Msa0180440:three_prime_UTR 40.0%
!! TTTTCCTTCTTTAGGAGGTG+AGG - chr1_4:68308514-68308533 Msa0180440:intron 40.0%
TTAGGAGGTGAGGTTGAATA+TGG - chr1_4:68308524-68308543 Msa0180440:intron 40.0%
GTGAGGTTGAATATGGAAGT+AGG - chr1_4:68308531-68308550 Msa0180440:three_prime_UTR 40.0%
TCTCTGTTCACAGCAATGAA+GGG + chr1_4:68308702-68308721 None:intergenic 40.0%
TTCTCTGTTCACAGCAATGA+AGG + chr1_4:68308703-68308722 None:intergenic 40.0%
TGTGAACAGAGAAGTTTAGC+AGG - chr1_4:68308710-68308729 Msa0180440:intron 40.0%
TTCTGCACATCGATAATTCG+AGG + chr1_4:68308778-68308797 None:intergenic 40.0%
! GCAGCATTTTTGTAGCTACA+TGG - chr1_4:68308887-68308906 Msa0180440:intron 40.0%
AGAACATAAATGTCAGCTGG+TGG + chr1_4:68308973-68308992 None:intergenic 40.0%
CCAAGAACATAAATGTCAGC+TGG + chr1_4:68308976-68308995 None:intergenic 40.0%
CCAGCTGACATTTATGTTCT+TGG - chr1_4:68308973-68308992 Msa0180440:intron 40.0%
! GGGTAAGAATTGTTGCTTGA+CGG - chr1_4:68308994-68309013 Msa0180440:intron 40.0%
AGGATATTACCGGCATTCAA+CGG + chr1_4:68309317-68309336 None:intergenic 40.0%
TTGAATGCCGGTAATATCCT+AGG - chr1_4:68309317-68309336 Msa0180440:three_prime_UTR 40.0%
TGAATGCCGGTAATATCCTA+GGG - chr1_4:68309318-68309337 Msa0180440:three_prime_UTR 40.0%
ATAACATCCACTACTTCCAC+TGG + chr1_4:68309414-68309433 None:intergenic 40.0%
AGAATTCGTCTTTCTTCCAC+AGG - chr1_4:68309501-68309520 Msa0180440:CDS 40.0%
CTGTATCTTCGATCAACTTG+TGG + chr1_4:68309587-68309606 None:intergenic 40.0%
ATAGGCCTAGTGACTATTCA+AGG - chr1_4:68309672-68309691 Msa0180440:intron 40.0%
TAGGCCTAGTGACTATTCAA+GGG - chr1_4:68309673-68309692 Msa0180440:intron 40.0%
GACCAAGTGACTATTCAAGA+TGG - chr1_4:68309711-68309730 Msa0180440:CDS 40.0%
CCAAGTGACTATTCAAGATG+GGG - chr1_4:68309713-68309732 Msa0180440:CDS 40.0%
GGTGAATATAAGACGGTACT+CGG + chr1_4:68309773-68309792 None:intergenic 40.0%
GGACATCGGTGAATATAAGA+CGG + chr1_4:68309780-68309799 None:intergenic 40.0%
TATTCACCGATGTCCACTAA+TGG - chr1_4:68309785-68309804 Msa0180440:CDS 40.0%
GTTGCAAGTAAGCAAATGGT+GGG - chr1_4:68309866-68309885 Msa0180440:intron 40.0%
AGAGGATTGATGGGATATCT+AGG - chr1_4:68309962-68309981 Msa0180440:CDS 40.0%
GGTGAAAATGATGGTTGCTT+AGG - chr1_4:68310057-68310076 Msa0180440:intron 40.0%
ATCTGCAGTCATTTAACCTC+AGG - chr1_4:68310167-68310186 Msa0180440:intron 40.0%
TTTAACCTCAGGACAGAAAG+AGG - chr1_4:68310178-68310197 Msa0180440:intron 40.0%
TTAACCTCAGGACAGAAAGA+GGG - chr1_4:68310179-68310198 Msa0180440:intron 40.0%
ATATGCACCCCAAGGAAAAA+AGG - chr1_4:68310905-68310924 Msa0180440:CDS 40.0%
!!! GTGTTCTCCTTTTTTCCTTG+GGG + chr1_4:68310915-68310934 None:intergenic 40.0%
!!! GGTGTTCTCCTTTTTTCCTT+GGG + chr1_4:68310916-68310935 None:intergenic 40.0%
!!! AGGTGTTCTCCTTTTTTCCT+TGG + chr1_4:68310917-68310936 None:intergenic 40.0%
AAAAAAGGAGAACACCTGCT+TGG - chr1_4:68310920-68310939 Msa0180440:CDS 40.0%
ATAGGTGTGACCGTATTCTA+TGG - chr1_4:68311056-68311075 Msa0180440:CDS 40.0%
TGTGACCGTATTCTATGGTA+TGG - chr1_4:68311061-68311080 Msa0180440:CDS 40.0%
CGTATTCTATGGTATGGAGA+AGG - chr1_4:68311067-68311086 Msa0180440:CDS 40.0%
CGCGAACATAAGACAATTGA+TGG + chr1_4:68311096-68311115 None:intergenic 40.0%
ATATGCCATAAACAGGTCTG+TGG + chr1_4:68311138-68311157 None:intergenic 40.0%
GCCCAAAATATGCCATAAAC+AGG + chr1_4:68311145-68311164 None:intergenic 40.0%
GAAGAACTTCTGCCATATTC+CGG - chr1_4:68311232-68311251 Msa0180440:CDS 40.0%
TCAGTATATCCACCGGAATA+TGG + chr1_4:68311247-68311266 None:intergenic 40.0%
! GCCTCAGAATCTTGTACTTT+TGG + chr1_4:68311540-68311559 None:intergenic 40.0%
! AATGGTCCCCTTTTACCAAT+AGG - chr1_4:68312010-68312029 Msa0180440:CDS 40.0%
! ATGGTCCCCTTTTACCAATA+GGG - chr1_4:68312011-68312030 Msa0180440:CDS 40.0%
TTTCATGGAGGGAGATAGAT+AGG - chr1_4:68312054-68312073 Msa0180440:CDS 40.0%
TTCATGGAGGGAGATAGATA+GGG - chr1_4:68312055-68312074 Msa0180440:CDS 40.0%
!! TATGCAGGTAGTTGATGAAG+AGG - chr1_4:68312401-68312420 Msa0180440:intron 40.0%
! ACTCAGCACAAGAGAGTTTT+TGG + chr1_4:68312645-68312664 None:intergenic 40.0%
! CCAAATTTGCATGCCTCTTT+TGG + chr1_4:68312784-68312803 None:intergenic 40.0%
! CCAAAAGAGGCATGCAAATT+TGG - chr1_4:68312781-68312800 Msa0180440:five_prime_UTR 40.0%
! GGAGGTGTAGAAACTTGCTT+GGG - chr1_4:68308107-68308126 Msa0180440:three_prime_UTR 45.0%
! GCAGATGCTGTTGTTTATGG+AGG - chr1_4:68308352-68308371 Msa0180440:three_prime_UTR 45.0%
TCAACCTCACCTCCTAAAGA+AGG + chr1_4:68308521-68308540 None:intergenic 45.0%
GCACATCGATAATTCGAGGA+TGG + chr1_4:68308774-68308793 None:intergenic 45.0%
GTAGCTACATGGAATGTAGC+TGG - chr1_4:68308898-68308917 Msa0180440:intron 45.0%
! ATAAATGTCAGCTGGTGGTG+AGG + chr1_4:68308968-68308987 None:intergenic 45.0%
GAGATAGTTCCGTTGAATGC+CGG - chr1_4:68309305-68309324 Msa0180440:intron 45.0%
GAATGCCGGTAATATCCTAG+GGG - chr1_4:68309319-68309338 Msa0180440:three_prime_UTR 45.0%
ACAATGGCCCTGCCAAAAAA+TGG - chr1_4:68309348-68309367 Msa0180440:exon 45.0%
!!! GAGCCAACCATTTTTTGGCA+GGG + chr1_4:68309358-68309377 None:intergenic 45.0%
!!! AGAGCCAACCATTTTTTGGC+AGG + chr1_4:68309359-68309378 None:intergenic 45.0%
AACAATCTTCCTGGAACCAG+TGG - chr1_4:68309395-68309414 Msa0180440:CDS 45.0%
TCTACAACTGGCTGAGGAAT+TGG + chr1_4:68309446-68309465 None:intergenic 45.0%
TCTGCATTCAGCTCTACAAC+TGG + chr1_4:68309458-68309477 None:intergenic 45.0%
AGAGCTGAATGCAGATTTCG+AGG - chr1_4:68309463-68309482 Msa0180440:CDS 45.0%
GAGCTGAATGCAGATTTCGA+GGG - chr1_4:68309464-68309483 Msa0180440:CDS 45.0%
TCGTTCCAGACAACTTCTAG+TGG - chr1_4:68309527-68309546 Msa0180440:CDS 45.0%
TCCAGACAACTTCTAGTGGT+TGG - chr1_4:68309531-68309550 Msa0180440:CDS 45.0%
CCAGACAACTTCTAGTGGTT+GGG - chr1_4:68309532-68309551 Msa0180440:CDS 45.0%
CAGACAACTTCTAGTGGTTG+GGG - chr1_4:68309533-68309552 Msa0180440:CDS 45.0%
AACTTCTAGTGGTTGGGGAA+TGG - chr1_4:68309538-68309557 Msa0180440:CDS 45.0%
ACTTGTGGTTGCACAAGTGA+AGG + chr1_4:68309572-68309591 None:intergenic 45.0%
CTTGCCCTTGAATAGTCACT+AGG + chr1_4:68309680-68309699 None:intergenic 45.0%
CCCCATCTTGAATAGTCACT+TGG + chr1_4:68309716-68309735 None:intergenic 45.0%
! GGTTCGTCTGATGATGACAA+TGG - chr1_4:68309734-68309753 Msa0180440:CDS 45.0%
! TGATGATGACAATGGCCTTG+TGG - chr1_4:68309742-68309761 Msa0180440:CDS 45.0%
! GATCCACCATTAGTGGACAT+CGG + chr1_4:68309794-68309813 None:intergenic 45.0%
GGATCTGCCTCTAATGAAGA+TGG - chr1_4:68309809-68309828 Msa0180440:CDS 45.0%
GAAGATGGATATAGCATGCC+AGG - chr1_4:68309824-68309843 Msa0180440:intron 45.0%
ATAGCATGCCAGGACATTCA+AGG - chr1_4:68309834-68309853 Msa0180440:intron 45.0%
CCATTTGCTTACTTGCAACG+AGG + chr1_4:68309865-68309884 None:intergenic 45.0%
CCTCGTTGCAAGTAAGCAAA+TGG - chr1_4:68309862-68309881 Msa0180440:intron 45.0%
CGTTGCAAGTAAGCAAATGG+TGG - chr1_4:68309865-68309884 Msa0180440:intron 45.0%
TGGGAATCTACCTTACCGTA+TGG - chr1_4:68309885-68309904 Msa0180440:intron 45.0%
GGGAATCTACCTTACCGTAT+GGG - chr1_4:68309886-68309905 Msa0180440:intron 45.0%
TACCTTACCGTATGGGTGAA+AGG - chr1_4:68309893-68309912 Msa0180440:intron 45.0%
!! AAAGTATCGTGTGTTGGCAG+AGG - chr1_4:68309944-68309963 Msa0180440:CDS 45.0%
! TGTGTTGGCAGAGGATTGAT+GGG - chr1_4:68309953-68309972 Msa0180440:CDS 45.0%
ACAAGGTTTCCTCGTGTTCA+TGG - chr1_4:68310248-68310267 Msa0180440:intron 45.0%
! AAAAAGAGGCCGAGCTTTTG+TGG - chr1_4:68310807-68310826 Msa0180440:CDS 45.0%
! AAAAGAGGCCGAGCTTTTGT+GGG - chr1_4:68310808-68310827 Msa0180440:CDS 45.0%
! CTTTTGTGGGATGGAACGAA+GGG - chr1_4:68310821-68310840 Msa0180440:CDS 45.0%
TCAGACCACAGACCTGTTTA+TGG - chr1_4:68311130-68311149 Msa0180440:CDS 45.0%
!! TTATGGCATATTTTGGGCCG+AGG - chr1_4:68311147-68311166 Msa0180440:CDS 45.0%
GACAGGGTCATGTTTGCTTA+GGG + chr1_4:68311473-68311492 None:intergenic 45.0%
! AAAAGCTTGGGCCCTCTTTT+GGG + chr1_4:68311495-68311514 None:intergenic 45.0%
!!! TTATTTTATTTTATTTTTCT+TGG + chr1_4:68308829-68308848 None:intergenic 5.0%
!! GAAAAATAAAATAAAATAAA+AGG - chr1_4:68308830-68308849 Msa0180440:intron 5.0%
!!! AAGATTTTTTAATTATTTTT+AGG - chr1_4:68312436-68312455 Msa0180440:intron 5.0%
!!! AGATTTTTTAATTATTTTTA+GGG - chr1_4:68312437-68312456 Msa0180440:intron 5.0%
!! ATATCAGAAGCTGGCTTGGG+AGG - chr1_4:68308089-68308108 Msa0180440:three_prime_UTR 50.0%
! GGGAGGTGTAGAAACTTGCT+TGG - chr1_4:68308106-68308125 Msa0180440:three_prime_UTR 50.0%
! GGTGTAGAAACTTGCTTGGG+AGG - chr1_4:68308110-68308129 Msa0180440:three_prime_UTR 50.0%
CTCTGCCCCTAGGATATTAC+CGG + chr1_4:68309327-68309346 None:intergenic 50.0%
TGGCCCTGCCAAAAAATGGT+TGG - chr1_4:68309352-68309371 Msa0180440:CDS 50.0%
ACTGGCTGAGGAATTGGAGA+CGG + chr1_4:68309440-68309459 None:intergenic 50.0%
TTCAGCTCTACAACTGGCTG+AGG + chr1_4:68309452-68309471 None:intergenic 50.0%
CAGATTTCGAGGGATCAGCT+AGG - chr1_4:68309474-68309493 Msa0180440:CDS 50.0%
CCCAACCACTAGAAGTTGTC+TGG + chr1_4:68309535-68309554 None:intergenic 50.0%
TCACCGATGTCCACTAATGG+TGG - chr1_4:68309788-68309807 Msa0180440:CDS 50.0%
AGAGGCAGATCCACCATTAG+TGG + chr1_4:68309801-68309820 None:intergenic 50.0%
AGGCAGTACCTTGAATGTCC+TGG + chr1_4:68309845-68309864 None:intergenic 50.0%
CAGTTCGCCTTTCACCCATA+CGG + chr1_4:68309903-68309922 None:intergenic 50.0%
! GTGTGTTGGCAGAGGATTGA+TGG - chr1_4:68309952-68309971 Msa0180440:CDS 50.0%
ATCACCCTCTTTCTGTCCTG+AGG + chr1_4:68310186-68310205 None:intergenic 50.0%
TTGTCAACGCCATGAACACG+AGG + chr1_4:68310260-68310279 None:intergenic 50.0%
AAGACTCTTACTCGTGCTCG+AGG + chr1_4:68310304-68310323 None:intergenic 50.0%
CAACAAGTGCCTTAGCAGAG+CGG + chr1_4:68310653-68310672 None:intergenic 50.0%
CGTTCCATCCCACAAAAGCT+CGG + chr1_4:68310819-68310838 None:intergenic 50.0%
! GCTTTTGTGGGATGGAACGA+AGG - chr1_4:68310820-68310839 Msa0180440:CDS 50.0%
AGGAGATGATATGCACCCCA+AGG - chr1_4:68310897-68310916 Msa0180440:CDS 50.0%
GAACTTCTGCCATATTCCGG+TGG - chr1_4:68311235-68311254 Msa0180440:CDS 50.0%
GGACAGGGTCATGTTTGCTT+AGG + chr1_4:68311474-68311493 None:intergenic 50.0%
ACATGACCCTGTCCCAAAAG+AGG - chr1_4:68311480-68311499 Msa0180440:intron 50.0%
CATGACCCTGTCCCAAAAGA+GGG - chr1_4:68311481-68311500 Msa0180440:intron 50.0%
! GAAAAGCTTGGGCCCTCTTT+TGG + chr1_4:68311496-68311515 None:intergenic 50.0%
! GCAGGAGCACGAGTCAAGTT+AGG - chr1_4:68308728-68308747 Msa0180440:intron 55.0%
AGCACGAGTCAAGTTAGGCG+AGG - chr1_4:68308733-68308752 Msa0180440:intron 55.0%
CGGTAATATCCTAGGGGCAG+AGG - chr1_4:68309325-68309344 Msa0180440:three_prime_UTR 55.0%
ATCCTAGGGGCAGAGGACAA+TGG - chr1_4:68309332-68309351 Msa0180440:exon 55.0%
!! CCACTACTTCCACTGGTTCC+AGG + chr1_4:68309407-68309426 None:intergenic 55.0%
CCTGGAACCAGTGGAAGTAG+TGG - chr1_4:68309404-68309423 Msa0180440:CDS 55.0%
! TTGTCTGGAACGATCGCCTG+TGG + chr1_4:68309520-68309539 None:intergenic 55.0%
! CGGTACTCGGTGAATCCACA+AGG + chr1_4:68309760-68309779 None:intergenic 55.0%
CGCCTTTCACCCATACGGTA+AGG + chr1_4:68309898-68309917 None:intergenic 55.0%
TCGTGCTCGAGGATTGTCTG+AGG + chr1_4:68310293-68310312 None:intergenic 55.0%
TCTCTCCTACCGCTCTGCTA+AGG - chr1_4:68310641-68310660 Msa0180440:CDS 55.0%
AAGTGCCTTAGCAGAGCGGT+AGG + chr1_4:68310649-68310668 None:intergenic 55.0%
TCCGTGAGGTGACTCAACCT+CGG + chr1_4:68311167-68311186 None:intergenic 55.0%
!!! TTGGGCCCTCTTTTGGGACA+GGG + chr1_4:68311489-68311508 None:intergenic 55.0%
! GAGGCCGAGCTTTTGTGGGA+TGG - chr1_4:68310812-68310831 Msa0180440:CDS 60.0%
GCCGAGGTTGAGTCACCTCA+CGG - chr1_4:68311163-68311182 Msa0180440:CDS 60.0%
!!! CTTGGGCCCTCTTTTGGGAC+AGG + chr1_4:68311490-68311509 None:intergenic 60.0%
GGCCATTGTCCTCTGCCCCT+AGG + chr1_4:68309337-68309356 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 68307827 68312804 68307827 ID=Msa0180440;Name=Msa0180440
chr1_4 mRNA 68307827 68312804 68307827 ID=Msa0180440-mRNA-1;Parent=Msa0180440;Name=Msa0180440-mRNA-1;_AED=0.06;_eAED=0.06;_QI=328|0.91|0.92|1|0.75|0.69|13|651|597
chr1_4 exon 68307827 68308223 68307827 ID=Msa0180440-mRNA-1:exon:22575;Parent=Msa0180440-mRNA-1
chr1_4 exon 68308320 68308433 68308320 ID=Msa0180440-mRNA-1:exon:22574;Parent=Msa0180440-mRNA-1
chr1_4 exon 68308526 68308623 68308526 ID=Msa0180440-mRNA-1:exon:22573;Parent=Msa0180440-mRNA-1
chr1_4 exon 68309307 68309571 68309307 ID=Msa0180440-mRNA-1:exon:22572;Parent=Msa0180440-mRNA-1
chr1_4 exon 68309690 68309838 68309690 ID=Msa0180440-mRNA-1:exon:22571;Parent=Msa0180440-mRNA-1
chr1_4 exon 68309921 68310029 68309921 ID=Msa0180440-mRNA-1:exon:22570;Parent=Msa0180440-mRNA-1
chr1_4 exon 68310319 68310512 68310319 ID=Msa0180440-mRNA-1:exon:22569;Parent=Msa0180440-mRNA-1
chr1_4 exon 68310640 68311333 68310640 ID=Msa0180440-mRNA-1:exon:22568;Parent=Msa0180440-mRNA-1
chr1_4 exon 68311636 68311740 68311636 ID=Msa0180440-mRNA-1:exon:22567;Parent=Msa0180440-mRNA-1
chr1_4 exon 68311828 68311912 68311828 ID=Msa0180440-mRNA-1:exon:22566;Parent=Msa0180440-mRNA-1
chr1_4 exon 68311987 68312103 68311987 ID=Msa0180440-mRNA-1:exon:22565;Parent=Msa0180440-mRNA-1
chr1_4 exon 68312258 68312345 68312258 ID=Msa0180440-mRNA-1:exon:22564;Parent=Msa0180440-mRNA-1
chr1_4 exon 68312447 68312804 68312447 ID=Msa0180440-mRNA-1:exon:22563;Parent=Msa0180440-mRNA-1
chr1_4 five_prime_UTR 68312477 68312804 68312477 ID=Msa0180440-mRNA-1:five_prime_utr;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68312447 68312476 68312447 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68312258 68312345 68312258 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68311987 68312103 68311987 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68311828 68311912 68311828 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68311636 68311740 68311636 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68310640 68311333 68310640 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68310319 68310512 68310319 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68309921 68310029 68309921 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68309690 68309838 68309690 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 CDS 68309349 68309571 68309349 ID=Msa0180440-mRNA-1:cds;Parent=Msa0180440-mRNA-1
chr1_4 three_prime_UTR 68309307 68309348 68309307 ID=Msa0180440-mRNA-1:three_prime_utr;Parent=Msa0180440-mRNA-1
chr1_4 three_prime_UTR 68308526 68308623 68308526 ID=Msa0180440-mRNA-1:three_prime_utr;Parent=Msa0180440-mRNA-1
chr1_4 three_prime_UTR 68308320 68308433 68308320 ID=Msa0180440-mRNA-1:three_prime_utr;Parent=Msa0180440-mRNA-1
chr1_4 three_prime_UTR 68307827 68308223 68307827 ID=Msa0180440-mRNA-1:three_prime_utr;Parent=Msa0180440-mRNA-1
Gene Sequence

>Msa0180440

ATGGGAGATGAGAATTCCAAGAACACCAAGCTCTCATGGTCAAAGAAAATGGTTAGAAAGTTTTTTAATTTCAAAAGCAAATGTGAAGATATTCAAGCAGATGCTGTTGTTTATGGAGGAGGTGAGGTTGAATATGGAAGTAGGAATAGCTTCTCTGAGAGAGAACCATGCACAATCAAAAAGAGCAAAACAGGTGAACCATTTCTTGAATCATTCCCTTTTGAAGTTCTTGATGAGAAGTTTAGCAGGAGCACGAGTCAAGTTAGGCGAGGAAGAATGAATCTTGACCATCCTCGAATTATCGATGTGCAGAACTATAGCATTTTTGTAGCTACATGGAATGTAGCTGGAAGATCCCCACCAAGTAATTTGAGTGTAGATGATTGGCTTCATTCCTCACCACCAGCTGACATTTATGTTCTTGGATTTCAAGAGATAGTTCCGTTGAATGCCGGTAATATCCTAGGGGCAGAGGACAATGGCCCTGCCAAAAAATGGTTGGCTCTTATCAGAAAGACATTAAACAATCTTCCTGGAACCAGTGGAAGTAGTGGATGTTATACACCGTCTCCAATTCCTCAGCCAGTTGTAGAGCTGAATGCAGATTTCGAGGGATCAGCTAGGCAGAAGAATTCGTCTTTCTTCCACAGGCGATCGTTCCAGACAACTTCTAGTGGTTGGGGAATGGACAATGATCCTTCACTTGTGCAACCACAAGTTGATCGAAGATACAGCGTTTGCGATCGTGTAATTTTCGGTAACAGGCCTAGTGACTTTGATCCTAGTTTAAGATGGGGTTATAGGCCTAGTGACTATTCAAGGGCAAGTGACTACTCGAGACCAAGTGACTATTCAAGATGGGGTTCGTCTGATGATGACAATGGCCTTGTGGATTCACCGAGTACCGTCTTATATTCACCGATGTCCACTAATGGTGGATCTGCCTCTAATGAAGATGGATATAGCATGCCAGGACATTCAAGGTACTGCCTCGTTGCAAGTAAGCAAATGGTGGGAATCTACCTTACCGTATGGGTGAAAGGCGAACTGAAAGATCATGTTCGAAACATGAAAGTATCGTGTGTTGGCAGAGGATTGATGGGATATCTAGGAAATAAGGGGTCCATCTCAATTAGTATGTCTGTGCACGAAACAAGCTTTTGCTTTATCTGCAGTCATTTAACCTCAGGACAGAAAGAGGGTGATGAACTAAGAAGAAATTCTGATGTAATGGAGATTCTTAAAAAGACAAGGTTTCCTCGTGTTCATGGCGTTGACAACGAGAAATCTCCTCAGACAATCCTCGAGCACGATCGAATTATATGGCTTGGAGATTTGAATTATCGGATCGCTCTCTCCTACCGCTCTGCTAAGGCACTTGTTGAGATGCAAAATTGGAGAGCATTGTTAGAAAATGATCAATTGAGAATAGAGCAAAAAAGAGGCCGAGCTTTTGTGGGATGGAACGAAGGGAAGATATATTTTCCTCCAACTTACAAGTATTCAACTAATTCAGATCGATACTCAGGAGATGATATGCACCCCAAGGAAAAAAGGAGAACACCTGCTTGGTGTGACCGTATTCTATGGTATGGAGAAGGTCTCCATCAATTGTCTTATGTTCGCGGTGAATCAAGATTTTCAGACCACAGACCTGTTTATGGCATATTTTGGGCCGAGGTTGAGTCACCTCACGGAAAATTGAAGAAAAGTATGAGCTGTTCTCAGTCAAGAATTGAGTTGGAAGAACTTCTGCCATATTCCGGTGGATATACTGAACTAAACTTTTTCTAA
Protein sequence

>Msa0180440

MGDENSKNTKLSWSKKMVRKFFNFKSKCEDIQADAVVYGGGEVEYGSRNSFSEREPCTIKKSKTGEPFLESFPFEVLDEKFSRSTSQVRRGRMNLDHPRIIDVQNYSIFVATWNVAGRSPPSNLSVDDWLHSSPPADIYVLGFQEIVPLNAGNILGAEDNGPAKKWLALIRKTLNNLPGTSGSSGCYTPSPIPQPVVELNADFEGSARQKNSSFFHRRSFQTTSSGWGMDNDPSLVQPQVDRRYSVCDRVIFGNRPSDFDPSLRWGYRPSDYSRASDYSRPSDYSRWGSSDDDNGLVDSPSTVLYSPMSTNGGSASNEDGYSMPGHSRYCLVASKQMVGIYLTVWVKGELKDHVRNMKVSCVGRGLMGYLGNKGSISISMSVHETSFCFICSHLTSGQKEGDELRRNSDVMEILKKTRFPRVHGVDNEKSPQTILEHDRIIWLGDLNYRIALSYRSAKALVEMQNWRALLENDQLRIEQKRGRAFVGWNEGKIYFPPTYKYSTNSDRYSGDDMHPKEKRRTPAWCDRILWYGEGLHQLSYVRGESRFSDHRPVYGIFWAEVESPHGKLKKSMSCSQSRIELEELLPYSGGYTELNFF*