AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0040330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040330 MtrunA17_Chr1g0205121 99.828 583 1 0 1 583 1 583 0.0 1210
Msa0040330 MtrunA17_Chr5g0394901 81.994 622 73 2 1 583 1 622 0.0 1025
Msa0040330 MtrunA17_Chr1g0185281 66.837 588 161 9 1 583 1 559 0.0 768
Msa0040330 MtrunA17_Chr7g0260081 65.517 580 168 8 1 577 1 551 0.0 743
Msa0040330 MtrunA17_Chr8g0355021 44.286 490 212 8 89 577 59 488 1.26e-130 391
Msa0040330 MtrunA17_Chr6g0466801 38.073 633 317 15 1 571 1 620 1.42e-124 380
Msa0040330 MtrunA17_Chr4g0054941 38.382 581 296 14 7 558 4 551 9.83e-121 369
Msa0040330 MtrunA17_Chr8g0382571 59.245 265 106 1 310 572 208 472 2.18e-110 338
Msa0040330 MtrunA17_Chr8g0382571 58.667 75 31 0 88 162 35 109 7.78e-22 99.0
Msa0040330 MtrunA17_Chr7g0263111 58.868 265 99 2 301 564 156 411 1.39e-104 323
Msa0040330 MtrunA17_Chr7g0263111 43.038 158 84 4 6 161 5 158 3.59e-27 114
Msa0040330 MtrunA17_Chr1g0201271 53.008 266 118 4 313 577 369 628 1.33e-91 295
Msa0040330 MtrunA17_Chr1g0201271 41.509 106 62 0 74 179 84 189 2.44e-19 92.0
Msa0040330 MtrunA17_Chr4g0054951 52.075 265 123 2 308 571 303 564 1.51e-88 285
Msa0040330 MtrunA17_Chr4g0054951 34.239 184 95 3 1 178 1 164 7.54e-25 108
Msa0040330 MtrunA17_Chr5g0400311 47.249 309 147 3 269 576 333 626 1.05e-86 281
Msa0040330 MtrunA17_Chr5g0400311 34.359 195 110 5 1 178 1 194 9.20e-27 115
Msa0040330 MtrunA17_Chr1g0165011 54.008 237 102 3 315 548 178 410 1.70e-83 268
Msa0040330 MtrunA17_Chr1g0165011 53.333 75 34 1 88 161 60 134 4.12e-18 87.4
Msa0040330 MtrunA17_Chr6g0479511 50.424 236 108 4 316 548 154 383 2.33e-83 265
Msa0040330 MtrunA17_Chr6g0479511 45.098 102 50 2 67 162 16 117 3.53e-19 90.1
Msa0040330 MtrunA17_Chr8g0375751 50.382 262 124 3 304 562 135 393 6.83e-81 260
Msa0040330 MtrunA17_Chr8g0375751 54.321 81 34 2 82 161 52 130 5.18e-19 89.7
Msa0040330 MtrunA17_Chr6g0452181 47.857 280 124 7 298 572 154 416 1.02e-78 255
Msa0040330 MtrunA17_Chr6g0452181 57.692 78 31 1 87 162 51 128 1.86e-18 88.2
Msa0040330 MtrunA17_Chr1g0189231 33.184 223 126 4 313 516 606 824 3.52e-29 123
Msa0040330 MtrunA17_Chr6g0488541 38.596 114 67 2 404 516 787 898 7.01e-16 81.6
Msa0040330 MtrunA17_Chr1g0154491 31.500 200 109 9 351 539 143 325 1.89e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040330 AT1G05470.2 71.930 627 122 9 1 583 1 617 0.0 884
Msa0040330 AT1G05470.1 71.930 627 122 9 1 583 1 617 0.0 884
Msa0040330 AT2G32010.2 74.833 600 128 9 1 583 1 594 0.0 884
Msa0040330 AT2G32010.1 74.833 600 128 9 1 583 1 594 0.0 884
Msa0040330 AT2G32010.4 74.833 600 128 9 1 583 1 594 0.0 884
Msa0040330 AT2G32010.3 74.833 600 128 9 1 583 1 594 0.0 884
Msa0040330 AT3G63240.2 61.263 586 181 12 1 581 1 545 0.0 686
Msa0040330 AT3G63240.1 61.263 586 181 12 1 581 1 545 0.0 686
Msa0040330 AT5G65090.2 44.877 488 232 7 88 572 6 459 8.12e-138 409
Msa0040330 AT5G65090.3 44.877 488 232 7 88 572 69 522 5.14e-137 409
Msa0040330 AT5G65090.1 44.877 488 232 7 88 572 69 522 5.14e-137 409
Msa0040330 AT5G04980.4 62.241 241 90 1 314 553 156 396 3.39e-105 323
Msa0040330 AT5G04980.2 62.241 241 90 1 314 553 220 460 2.51e-104 323
Msa0040330 AT5G04980.2 60.000 70 28 0 89 158 35 104 3.41e-20 94.4
Msa0040330 AT5G04980.1 62.241 241 90 1 314 553 191 431 2.63e-104 322
Msa0040330 AT5G04980.1 60.000 70 28 0 89 158 6 75 3.25e-20 94.0
Msa0040330 AT5G04980.3 62.241 241 90 1 314 553 191 431 2.63e-104 322
Msa0040330 AT5G04980.3 60.000 70 28 0 89 158 6 75 3.25e-20 94.0
Msa0040330 AT2G37440.2 59.839 249 96 2 315 563 113 357 1.35e-101 313
Msa0040330 AT2G37440.2 53.333 105 29 2 94 179 1 104 2.42e-23 102
Msa0040330 AT2G37440.1 59.839 249 96 2 315 563 194 438 1.26e-100 313
Msa0040330 AT2G37440.1 43.478 161 70 3 9 162 7 153 2.68e-28 119
Msa0040330 AT2G37440.3 59.839 249 96 2 315 563 194 438 1.26e-100 313
Msa0040330 AT2G37440.3 43.478 161 70 3 9 162 7 153 2.68e-28 119
Msa0040330 AT1G71710.2 51.550 258 119 3 315 571 399 651 3.53e-86 281
Msa0040330 AT1G71710.2 44.882 127 61 2 73 190 100 226 6.09e-24 107
Msa0040330 AT1G71710.1 51.550 258 119 3 315 571 408 660 3.74e-86 281
Msa0040330 AT1G71710.1 44.882 127 61 2 73 190 109 235 7.51e-24 106
Msa0040330 AT2G01900.1 56.652 233 96 3 316 547 154 382 1.18e-85 273
Msa0040330 AT2G01900.1 52.778 72 33 1 91 161 57 128 1.57e-16 82.4
Msa0040330 AT2G01900.3 56.652 233 96 3 316 547 162 390 1.40e-85 273
Msa0040330 AT2G01900.3 52.778 72 33 1 91 161 65 136 1.55e-16 82.8
Msa0040330 AT4G18010.1 50.575 261 125 2 304 563 378 635 7.16e-85 278
Msa0040330 AT4G18010.1 47.573 103 50 1 75 177 94 192 1.42e-24 108
Msa0040330 AT1G34120.5 49.213 254 123 4 315 566 182 431 3.72e-84 270
Msa0040330 AT1G34120.1 49.213 254 123 4 315 566 333 582 4.70e-82 268
Msa0040330 AT1G34120.1 58.442 77 32 0 87 163 96 172 8.32e-21 97.1
Msa0040330 AT1G34120.2 49.213 254 123 4 315 566 337 586 5.68e-82 268
Msa0040330 AT1G34120.2 58.442 77 32 0 87 163 100 176 8.65e-21 96.7
Msa0040330 AT2G01900.2 54.936 233 91 4 316 547 154 373 1.33e-80 259
Msa0040330 AT2G01900.2 52.778 72 33 1 91 161 57 128 1.52e-16 82.4
Msa0040330 AT1G34120.3 48.819 254 123 5 315 566 337 585 1.65e-79 262
Msa0040330 AT1G34120.3 58.442 77 32 0 87 163 100 176 8.77e-21 96.7
Msa0040330 AT4G18010.2 53.299 197 89 1 314 510 388 581 5.57e-67 228
Msa0040330 AT4G18010.2 47.573 103 50 1 75 177 94 192 1.08e-24 108
Msa0040330 AT1G34120.4 50.350 143 70 1 315 457 333 474 2.64e-45 167
Msa0040330 AT1G34120.4 58.442 77 32 0 87 163 96 172 4.96e-21 97.1
Msa0040330 AT2G43900.2 32.340 235 131 5 306 516 649 879 3.32e-31 130
Msa0040330 AT2G43900.1 32.340 235 131 5 306 516 649 879 3.40e-31 130
Msa0040330 AT1G65580.2 28.114 281 159 6 306 547 344 620 9.45e-29 122
Msa0040330 AT1G65580.1 28.114 281 159 6 306 547 610 886 1.07e-28 122
Msa0040330 AT1G05630.2 28.114 281 159 7 306 547 643 919 1.54e-28 122
Msa0040330 AT1G05630.3 30.493 223 127 5 318 516 655 873 2.30e-28 121
Msa0040330 AT2G31830.3 29.148 223 130 4 318 516 664 882 5.24e-27 117
Msa0040330 AT2G31830.2 29.148 223 130 4 318 516 664 882 5.95e-27 117
Msa0040330 AT2G31830.1 29.148 223 130 4 318 516 664 882 6.41e-27 117
Msa0040330 AT1G47510.4 33.673 196 102 8 351 539 87 261 2.33e-20 91.7
Msa0040330 AT1G47510.1 33.503 197 104 8 351 539 146 323 5.02e-20 92.0
Msa0040330 AT1G05630.1 33.333 150 82 4 414 547 806 953 1.51e-15 80.9
Msa0040330 AT1G47510.2 39.316 117 59 5 430 539 149 260 6.34e-13 69.7

Find 175 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTGTTCTCTCTTATTTA+TGG 0.108009 1_1:+70459797 Msa0040330:five_prime_UTR
GACCTGTTTATGGCATATTT+TGG 0.108267 1_1:+70463000 Msa0040330:CDS
AATTCAAGTGTTTGTTAATT+TGG 0.111817 1_1:-70464133 None:intergenic
CAAGCAGATGCTGTTGTTTA+TGG 0.156723 1_1:+70460213 Msa0040330:CDS
TCAGACCACAGACCTGTTTA+TGG 0.185501 1_1:+70462990 Msa0040330:CDS
CCAAATTTGCATGCCTCTTT+TGG 0.186478 1_1:-70464645 None:intergenic
CCAAAAGAGGCATGCAAATT+TGG 0.194765 1_1:+70464645 Msa0040330:three_prime_UTR
CCAGCTGACATTTATGTTCT+TGG 0.223313 1_1:+70460832 Msa0040330:CDS
CATTTCCCATATACCGAAAA+AGG 0.224239 1_1:+70463948 Msa0040330:three_prime_UTR
GTAAAATCCCTATTGGTAAA+AGG 0.226517 1_1:-70463882 None:intergenic
CTAGTTTAAGATGGGGTTAT+AGG 0.246789 1_1:+70461512 Msa0040330:CDS
TCTTGTTCTCTCTTATTTAT+GGG 0.253835 1_1:+70459798 Msa0040330:five_prime_UTR
CACTTGTTGAGATGCAAAAT+TGG 0.283420 1_1:+70462523 Msa0040330:CDS
ATTAATGTAGTCGAATTATA+TGG 0.291644 1_1:+70462451 Msa0040330:intron
CAGTTTATAATCTCTAGTTT+TGG 0.300310 1_1:+70464059 Msa0040330:intron
TTAGGAGGTGAGGTTGAATA+TGG 0.311008 1_1:+70460392 Msa0040330:intron
GCTCTCATGGTCAAAGAAAA+TGG 0.317894 1_1:+70460149 Msa0040330:intron
CTTCAAAGTAAAATCCCTAT+TGG 0.318880 1_1:-70463889 None:intergenic
TTTCCACTTTAACAATCATT+AGG 0.329753 1_1:+70464154 Msa0040330:three_prime_UTR
CGCGAACATAAGACAATTGA+TGG 0.333710 1_1:-70462953 None:intergenic
ATAGAAAAGGTACTTGAATA+TGG 0.334170 1_1:-70463175 None:intergenic
ATGAAGTAGAAGTGTCAAAA+TGG 0.334431 1_1:+70460000 Msa0040330:exon
ATAGGTGTGACCGTATTCTA+TGG 0.336360 1_1:+70462916 Msa0040330:intron
TCAGTATATCCACCGGAATA+TGG 0.344859 1_1:-70463104 None:intergenic
GCTATATCCATCTTCATTAG+AGG 0.346736 1_1:-70461674 None:intergenic
GATGGGATATCTAGGAAATA+AGG 0.356770 1_1:+70461828 Msa0040330:CDS
CCAGACAACTTCTAGTGGTT+GGG 0.363056 1_1:+70461390 Msa0040330:CDS
TTTCATGGAGGGAGATAGAT+AGG 0.366271 1_1:+70463918 Msa0040330:three_prime_UTR
GAAGAACTTCTGCCATATTC+CGG 0.366341 1_1:+70463092 Msa0040330:CDS
GGCTTGGAGATTTGAATTAT+CGG 0.367306 1_1:+70462472 Msa0040330:CDS
CCACTACTTCCACTGGTTCC+AGG 0.367772 1_1:-70461262 None:intergenic
TCTACAACTGGCTGAGGAAT+TGG 0.371098 1_1:-70461301 None:intergenic
ACAAGGTTTCCTCGTGTTCA+TGG 0.380420 1_1:+70462107 Msa0040330:CDS
TAAAATCCCTATTGGTAAAA+GGG 0.382265 1_1:-70463881 None:intergenic
CAGCTGACATTTATGTTCTT+GGG 0.385507 1_1:+70460833 Msa0040330:CDS
TGAAATATCAGAAGCTGGCT+TGG 0.397750 1_1:+70459949 Msa0040330:five_prime_UTR
TTAGTTGAATACTTGTAAGT+TGG 0.398251 1_1:-70462718 None:intergenic
TTACCTAATGATTGTTAAAG+TGG 0.404122 1_1:-70464157 None:intergenic
AAGACATTAAACAATCTTCC+TGG 0.405151 1_1:+70461244 Msa0040330:CDS
GTAATTTGAGTGTAGATGAT+TGG 0.405806 1_1:+70460794 Msa0040330:CDS
TGATCATACTATCATATGTT+AGG 0.407207 1_1:-70464089 None:intergenic
AGTATTTAACAAACCAAAAG+AGG 0.416370 1_1:+70464632 Msa0040330:three_prime_UTR
TTATCGATGTGCAGAACTAT+AGG 0.428465 1_1:+70460646 Msa0040330:CDS
GTTGAATACTTGTAAGTTGG+AGG 0.434410 1_1:-70462715 None:intergenic
AAGAAGAAATTCTGATGTAA+TGG 0.434526 1_1:+70462070 Msa0040330:CDS
CTCTGCCCCTAGGATATTAC+CGG 0.436957 1_1:-70461182 None:intergenic
GCCCAAAATATGCCATAAAC+AGG 0.437361 1_1:-70463002 None:intergenic
CATCAATTGTCTTATGTTCG+CGG 0.437643 1_1:+70462954 Msa0040330:CDS
ACTTTGAAGAAATACTTTCA+TGG 0.442657 1_1:+70463903 Msa0040330:three_prime_UTR
ATCTGCAGTCATTTAACCTC+AGG 0.444290 1_1:+70462026 Msa0040330:CDS
ATAGGCCTAGTGACTATTCA+AGG 0.450945 1_1:+70461530 Msa0040330:CDS
ACTTTGATCCTAGTTTAAGA+TGG 0.450999 1_1:+70461503 Msa0040330:CDS
TTGAATGCCGGTAATATCCT+AGG 0.455415 1_1:+70461175 Msa0040330:CDS
CCCAACCACTAGAAGTTGTC+TGG 0.456209 1_1:-70461390 None:intergenic
GCAGGAGCACGAGTCAAGTT+AGG 0.456785 1_1:+70460592 Msa0040330:CDS
TGAAGTAGAAGTGTCAAAAT+GGG 0.458973 1_1:+70460001 Msa0040330:exon
TTTAACCTCAGGACAGAAAG+AGG 0.459850 1_1:+70462037 Msa0040330:CDS
AGAGGATTGATGGGATATCT+AGG 0.460059 1_1:+70461820 Msa0040330:CDS
TATTCACCGATGTCCACTAA+TGG 0.460168 1_1:+70461643 Msa0040330:CDS
CTTTGATCCTAGTTTAAGAT+GGG 0.463958 1_1:+70461504 Msa0040330:CDS
GAAATATCAGAAGCTGGCTT+GGG 0.468557 1_1:+70459950 Msa0040330:five_prime_UTR
TGTAGTCGAATTATATGGCT+TGG 0.470661 1_1:+70462456 Msa0040330:intron
TTCTCAGTCAAGAATTGAGT+TGG 0.478219 1_1:+70463070 Msa0040330:CDS
GTGTGTTGGCAGAGGATTGA+TGG 0.485090 1_1:+70461810 Msa0040330:CDS
GTTTGATGAATTAGCTCTCA+TGG 0.485296 1_1:+70460136 Msa0040330:intron
AGTATAATTGAGTAAAGAAA+AGG 0.485984 1_1:+70464449 Msa0040330:three_prime_UTR
TTGTCTGGAACGATCGCCTA+TGG 0.486058 1_1:-70461375 None:intergenic
GTAGCTACATGGAATGTAGC+TGG 0.489460 1_1:+70460757 Msa0040330:CDS
TCCAGACAACTTCTAGTGGT+TGG 0.491468 1_1:+70461389 Msa0040330:CDS
ATCACCCTCTTTCTGTCCTG+AGG 0.491996 1_1:-70462042 None:intergenic
AGAATTCGTCTTTCTTCCAT+AGG 0.494990 1_1:+70461359 Msa0040330:CDS
CTACACTCAAATTACTTGGT+GGG 0.495753 1_1:-70460786 None:intergenic
TCATCTACACTCAAATTACT+TGG 0.496940 1_1:-70460790 None:intergenic
CTATAACCCCATCTTAAACT+AGG 0.499596 1_1:-70461511 None:intergenic
TCTGCATTCAGCTCTACAAC+TGG 0.501429 1_1:-70461313 None:intergenic
ATCACTGAAATATCAGAAGC+TGG 0.504559 1_1:+70459944 Msa0040330:five_prime_UTR
CCTCGTTGCAAGTAAGCAAA+TGG 0.505118 1_1:+70461720 Msa0040330:CDS
GAAGATGGATATAGCATGCC+AGG 0.505717 1_1:+70461682 Msa0040330:CDS
TGTGACCGTATTCTATGGTA+TGG 0.505817 1_1:+70462921 Msa0040330:CDS
CGCCTTTCACCCATACGGTA+AGG 0.509680 1_1:-70461753 None:intergenic
GTGAGGTTGAATATGGAAGT+AGG 0.510611 1_1:+70460399 Msa0040330:CDS
GGGAGGTGTAGAAACTTGCT+TGG 0.510701 1_1:+70459970 Msa0040330:five_prime_UTR
GGAGGTGTAGAAACTTGCTT+GGG 0.511972 1_1:+70459971 Msa0040330:five_prime_UTR
CAGACAACTTCTAGTGGTTG+GGG 0.516388 1_1:+70461391 Msa0040330:CDS
TGTGAACAGAGAAGTTTAGC+AGG 0.521211 1_1:+70460574 Msa0040330:intron
AACTTCTAGTGGTTGGGGAA+TGG 0.521620 1_1:+70461396 Msa0040330:CDS
CTTCTCCATACCATAGAATA+CGG 0.523333 1_1:-70462926 None:intergenic
AAAAGGTACTTGAATATGGA+TGG 0.524120 1_1:-70463171 None:intergenic
TGGGAATCTACCTTACCGTA+TGG 0.527175 1_1:+70461743 Msa0040330:CDS
AGAGGCAGATCCACCATTAG+TGG 0.529627 1_1:-70461656 None:intergenic
GGATCTGCCTCTAATGAAGA+TGG 0.530173 1_1:+70461667 Msa0040330:CDS
TCTCTCCTACCGCTCTGCTA+AGG 0.532367 1_1:+70462500 Msa0040330:CDS
TACCTTACCGTATGGGTGAA+AGG 0.532707 1_1:+70461751 Msa0040330:CDS
AAAGAGGCATGCAAATTTGG+CGG 0.537226 1_1:+70464648 Msa0040330:three_prime_UTR
AAGAGGCATGCAAATTTGGC+GGG 0.538372 1_1:+70464649 Msa0040330:three_prime_UTR
GACCGAGTGACTATTCAAGA+TGG 0.545416 1_1:+70461569 Msa0040330:CDS
ACCGAGTGACTATTCAAGAT+GGG 0.545622 1_1:+70461570 Msa0040330:CDS
AACAAGGAAACAAATGAACT+TGG 0.546436 1_1:+70459900 Msa0040330:five_prime_UTR
AAGTGCCTTAGCAGAGCGGT+AGG 0.547515 1_1:-70462505 None:intergenic
CTTGCCCTTGAATAGTCACT+AGG 0.549171 1_1:-70461535 None:intergenic
AGGCAGTACCTTGAATGTCC+TGG 0.550535 1_1:-70461700 None:intergenic
CGGTAATATCCTAGGGGCAG+AGG 0.551227 1_1:+70461183 Msa0040330:CDS
TGAAGAAATACTTTCATGGA+GGG 0.552511 1_1:+70463907 Msa0040330:three_prime_UTR
TACACTCAAATTACTTGGTG+GGG 0.552545 1_1:-70460785 None:intergenic
GGCCATTGTCCTCTGCCCCT+AGG 0.552956 1_1:-70461192 None:intergenic
CAGTTCGCCTTTCACCCATA+CGG 0.553302 1_1:-70461758 None:intergenic
AGAGCTGAATGCAGATTTCG+AGG 0.555270 1_1:+70461321 Msa0040330:CDS
CTGTATCTTCGATCAACTTG+TGG 0.556535 1_1:-70461442 None:intergenic
TCTACACTCAAATTACTTGG+TGG 0.557302 1_1:-70460787 None:intergenic
TTCTGCACATCGATAATTCG+AGG 0.557659 1_1:-70460639 None:intergenic
ATATCAGAAGCTGGCTTGGG+AGG 0.558210 1_1:+70459953 Msa0040330:five_prime_UTR
GAGATAGTTCCGTTGAATGC+CGG 0.558858 1_1:+70461163 Msa0040330:CDS
CCCCATCTTGAATAGTCACT+CGG 0.558968 1_1:-70461571 None:intergenic
AAAGTATCGTGTGTTGGCAG+AGG 0.561574 1_1:+70461802 Msa0040330:CDS
CCAAGAACATAAATGTCAGC+TGG 0.562731 1_1:-70460832 None:intergenic
TAGAACAAGACAATGCAGTA+AGG 0.564196 1_1:-70459722 None:intergenic
ATAGCATGCCAGGACATTCA+AGG 0.564632 1_1:+70461692 Msa0040330:CDS
ATGTGATAATCTTACCAAGC+AGG 0.565102 1_1:-70462793 None:intergenic
CACAGACATACTAATTGAGA+TGG 0.566006 1_1:-70461982 None:intergenic
TTCAGCTCTACAACTGGCTG+AGG 0.570219 1_1:-70461307 None:intergenic
AAAATCCCTATTGGTAAAAG+GGG 0.570576 1_1:-70463880 None:intergenic
AGGATATTACCGGCATTCAA+CGG 0.574425 1_1:-70461172 None:intergenic
CCTGGAACCAGTGGAAGTAG+TGG 0.574999 1_1:+70461262 Msa0040330:CDS
AACAATCTTCCTGGAACCAG+TGG 0.576589 1_1:+70461253 Msa0040330:CDS
GGTGTAGAAACTTGCTTGGG+AGG 0.577053 1_1:+70459974 Msa0040330:five_prime_UTR
ACTAATTCAGATCGATACTC+AGG 0.577073 1_1:+70462736 Msa0040330:CDS
GTTTAGTTCAGTATATCCAC+CGG 0.581440 1_1:-70463111 None:intergenic
CGTTGCAAGTAAGCAAATGG+TGG 0.581706 1_1:+70461723 Msa0040330:CDS
ATAACATCCACTACTTCCAC+TGG 0.583435 1_1:-70461269 None:intergenic
TGAATGCCGGTAATATCCTA+GGG 0.584511 1_1:+70461176 Msa0040330:CDS
GGGAATCTACCTTACCGTAT+GGG 0.584626 1_1:+70461744 Msa0040330:CDS
CGTTCCATCCCACAAAAGCT+CGG 0.585491 1_1:-70462675 None:intergenic
ACTTGTGGTTGCACAAGTGA+AGG 0.585723 1_1:-70461427 None:intergenic
TCCGTGAGGTGACTCAACCT+CGG 0.588228 1_1:-70463024 None:intergenic
CGTATTCTATGGTATGGAGA+AGG 0.589620 1_1:+70462927 Msa0040330:CDS
GGTGAATATAAGACGGTACT+CGG 0.592451 1_1:-70461628 None:intergenic
AACATGAAAGTATCGTGTGT+TGG 0.596159 1_1:+70461796 Msa0040330:CDS
GCAGATGCTGTTGTTTATGG+AGG 0.601488 1_1:+70460216 Msa0040330:CDS
AAACTAGGATCAAAGTCACT+AGG 0.603336 1_1:-70461496 None:intergenic
TTCATGGAGGGAGATAGATA+GGG 0.606427 1_1:+70463919 Msa0040330:three_prime_UTR
TCACCGATGTCCACTAATGG+TGG 0.611075 1_1:+70461646 Msa0040330:CDS
AGCACTTTAAGAATAATGCA+TGG 0.611704 1_1:-70459773 None:intergenic
TTTGATCCTAGTTTAAGATG+GGG 0.618992 1_1:+70461505 Msa0040330:CDS
GCCGAGGTTGAGTCACCTCA+CGG 0.620878 1_1:+70463023 Msa0040330:CDS
GAGCTGAATGCAGATTTCGA+GGG 0.621883 1_1:+70461322 Msa0040330:CDS
ATCCTAGGGGCAGAGGACAA+TGG 0.622061 1_1:+70461190 Msa0040330:CDS
TTGTCAACGCCATGAACACG+AGG 0.624907 1_1:-70462116 None:intergenic
CAGATTTCGAGGGATCAGCT+AGG 0.626550 1_1:+70461332 Msa0040330:CDS
ATAAATGTCAGCTGGTGGTG+AGG 0.628782 1_1:-70460824 None:intergenic
TTGAAGAAATACTTTCATGG+AGG 0.628992 1_1:+70463906 Msa0040330:three_prime_UTR
GTTGCAAGTAAGCAAATGGT+GGG 0.629979 1_1:+70461724 Msa0040330:CDS
GCACATCGATAATTCGAGGA+TGG 0.631089 1_1:-70460635 None:intergenic
TGATGATGACAATGGCCTTG+TGG 0.631802 1_1:+70461600 Msa0040330:CDS
AGCACGAGTCAAGTTAGGCG+AGG 0.638693 1_1:+70460597 Msa0040330:CDS
ATATGCCATAAACAGGTCTG+TGG 0.638756 1_1:-70462995 None:intergenic
AGGAGATGATATGCACCCCA+AGG 0.644054 1_1:+70462756 Msa0040330:CDS
GCACTCACAAGAAGAAAACA+AGG 0.646186 1_1:+70459884 Msa0040330:five_prime_UTR
AAGACTCTTACTCGTGCTCG+AGG 0.646419 1_1:-70462160 None:intergenic
TGTGTTGGCAGAGGATTGAT+GGG 0.651992 1_1:+70461811 Msa0040330:CDS
TAGGCCTAGTGACTATTCAA+GGG 0.652233 1_1:+70461531 Msa0040330:CDS
CGGTACTCGGTGAATCCACA+AGG 0.653743 1_1:-70461615 None:intergenic
TCGTTCCAGACAACTTCTAG+TGG 0.655270 1_1:+70461385 Msa0040330:CDS
CCGAGTGACTATTCAAGATG+GGG 0.655421 1_1:+70461571 Msa0040330:CDS
GAACTTCTGCCATATTCCGG+TGG 0.669521 1_1:+70463095 Msa0040330:CDS
TTAACCTCAGGACAGAAAGA+GGG 0.672945 1_1:+70462038 Msa0040330:CDS
AGAACATAAATGTCAGCTGG+TGG 0.673457 1_1:-70460829 None:intergenic
ACTGGCTGAGGAATTGGAGA+CGG 0.681528 1_1:-70461295 None:intergenic
GGACATCGGTGAATATAAGA+CGG 0.682139 1_1:-70461635 None:intergenic
GATCCACCATTAGTGGACAT+CGG 0.683487 1_1:-70461649 None:intergenic
CCATTTGCTTACTTGCAACG+AGG 0.692457 1_1:-70461720 None:intergenic
TCGTGCTCGAGGATTGTCTG+AGG 0.692935 1_1:-70462149 None:intergenic
CAACAAGTGCCTTAGCAGAG+CGG 0.698793 1_1:-70462509 None:intergenic
TGAGAATTCCAAGAACACCA+AGG 0.705085 1_1:+70460027 Msa0040330:CDS
GGTTCGTCTGATGATGACAA+TGG 0.726292 1_1:+70461592 Msa0040330:CDS
GAATGCCGGTAATATCCTAG+GGG 0.756791 1_1:+70461177 Msa0040330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCAATATTTTATTATGT+TGG + chr1_1:70460071-70460090 Msa0040330:intron 10.0%
!!! TTTAAGAGTAATTTATTTTA+TGG + chr1_1:70461895-70461914 Msa0040330:intron 10.0%
!!! TTATTTTATAAAATCCTATT+AGG - chr1_1:70462821-70462840 None:intergenic 10.0%
!! AATATTATAAAGAAAAGTTT+GGG - chr1_1:70463367-70463386 None:intergenic 10.0%
!!! TTTATTTTTCTTGGTAAAAT+TGG - chr1_1:70460684-70460703 None:intergenic 15.0%
!! ACCAAGAAAAATAAAATAAA+AGG + chr1_1:70460689-70460708 Msa0040330:intron 15.0%
!!! TGAACATTTTTTCTTTTTAT+AGG + chr1_1:70462898-70462917 Msa0040330:intron 15.0%
!! CAATATTATAAAGAAAAGTT+TGG - chr1_1:70463368-70463387 None:intergenic 15.0%
!! ATAATAATTGTCAAAAACCT+TGG - chr1_1:70460047-70460066 None:intergenic 20.0%
!! AACAATTCATATTCTTCAAT+TGG + chr1_1:70460291-70460310 Msa0040330:intron 20.0%
!! TATAGATTACTACAATTTCT+TGG + chr1_1:70460336-70460355 Msa0040330:intron 20.0%
!!! GCCTTTTATTTTATTTTTCT+TGG - chr1_1:70460693-70460712 None:intergenic 20.0%
!! CTTAAAGAAAAACAAAAGTT+AGG - chr1_1:70461881-70461900 None:intergenic 20.0%
!!! TTATTTTATGGTGAAAATGA+TGG + chr1_1:70461907-70461926 Msa0040330:intron 20.0%
!! ATTAATGTAGTCGAATTATA+TGG + chr1_1:70462451-70462470 Msa0040330:intron 20.0%
!! TAACTTAAACAATAAACATG+AGG - chr1_1:70462599-70462618 None:intergenic 20.0%
!!! AACTAAACTTTTTCTAAAGA+AGG + chr1_1:70463126-70463145 Msa0040330:exon 20.0%
!!! ACTAAACTTTTTCTAAAGAA+GGG + chr1_1:70463127-70463146 Msa0040330:exon 20.0%
!!! TAATCATGATTTTAAGATAG+TGG + chr1_1:70463214-70463233 Msa0040330:intron 20.0%
!!! ACTTTTCTTTATAATATTGC+TGG + chr1_1:70463369-70463388 Msa0040330:intron 20.0%
!! ATCATATAGGTATATTCTTT+AGG - chr1_1:70463499-70463518 None:intergenic 20.0%
!!! ATTGATTTCATGAAATTGAA+AGG + chr1_1:70463692-70463711 Msa0040330:intron 20.0%
!!! AATTCAAGTGTTTGTTAATT+TGG - chr1_1:70464136-70464155 None:intergenic 20.0%
!!! CAGTTATTTTTTTATTATGC+AGG + chr1_1:70464250-70464269 Msa0040330:intron 20.0%
!! AGTATAATTGAGTAAAGAAA+AGG + chr1_1:70464449-70464468 Msa0040330:three_prime_UTR 20.0%
!!! AATTTTTGTACTGATAAAGT+TGG + chr1_1:70464551-70464570 Msa0040330:three_prime_UTR 20.0%
!!! AACTCTTCTTTTTACTAATA+AGG + chr1_1:70464598-70464617 Msa0040330:three_prime_UTR 20.0%
!! TTCTTGTTCTCTCTTATTTA+TGG + chr1_1:70459797-70459816 Msa0040330:five_prime_UTR 25.0%
!! TCTTGTTCTCTCTTATTTAT+GGG + chr1_1:70459798-70459817 Msa0040330:five_prime_UTR 25.0%
! AAACAGTAACTGAGTTTATT+TGG - chr1_1:70460365-70460384 None:intergenic 25.0%
! ACTTGTGCAAATGTAAATAT+CGG - chr1_1:70460534-70460553 None:intergenic 25.0%
!!! TATACGGTTTTGTAATTTGT+AGG + chr1_1:70461004-70461023 Msa0040330:intron 25.0%
! AATTTGTAGGACTAAAAAGT+TGG + chr1_1:70461017-70461036 Msa0040330:intron 25.0%
!!! TATATGAGAGTTATTTTGGT+TGG + chr1_1:70461946-70461965 Msa0040330:intron 25.0%
! AAGAAGAAATTCTGATGTAA+TGG + chr1_1:70462070-70462089 Msa0040330:CDS 25.0%
! ATTAACCATTAGTTATTCTG+CGG - chr1_1:70462308-70462327 None:intergenic 25.0%
! AACAATAAACATGAGGTTAA+TGG - chr1_1:70462592-70462611 None:intergenic 25.0%
! TTAGTTGAATACTTGTAAGT+TGG - chr1_1:70462721-70462740 None:intergenic 25.0%
! AAAAATGTTCATGTCTTCAT+AGG - chr1_1:70462889-70462908 None:intergenic 25.0%
!!! ATAGAAAAGGTACTTGAATA+TGG - chr1_1:70463178-70463197 None:intergenic 25.0%
! ATGATTATGAGAGTCTATAA+GGG - chr1_1:70463201-70463220 None:intergenic 25.0%
! AAAAACAAAAAACTATGTGC+AGG + chr1_1:70463306-70463325 Msa0040330:intron 25.0%
! ACTAATGTCAAAGATCATAT+AGG - chr1_1:70463512-70463531 None:intergenic 25.0%
!! ACTTTTTACATAAGCTATCT+TGG - chr1_1:70463657-70463676 None:intergenic 25.0%
! TAAAATCCCTATTGGTAAAA+GGG - chr1_1:70463884-70463903 None:intergenic 25.0%
!! ACTTTGAAGAAATACTTTCA+TGG + chr1_1:70463903-70463922 Msa0040330:three_prime_UTR 25.0%
!! GAAGAAAAACTAACCTTTTT+CGG - chr1_1:70463964-70463983 None:intergenic 25.0%
! CAAAATTAGACAAAGAAATG+AGG - chr1_1:70464021-70464040 None:intergenic 25.0%
! AACTGAAAAAGATAAAGTGA+AGG - chr1_1:70464044-70464063 None:intergenic 25.0%
!!! CAGTTTATAATCTCTAGTTT+TGG + chr1_1:70464059-70464078 Msa0040330:intron 25.0%
! TGATCATACTATCATATGTT+AGG - chr1_1:70464092-70464111 None:intergenic 25.0%
! TTTCCACTTTAACAATCATT+AGG + chr1_1:70464154-70464173 Msa0040330:three_prime_UTR 25.0%
! TTACCTAATGATTGTTAAAG+TGG - chr1_1:70464160-70464179 None:intergenic 25.0%
! AGTATTTAACAAACCAAAAG+AGG + chr1_1:70464632-70464651 Msa0040330:three_prime_UTR 25.0%
! AGCACTTTAAGAATAATGCA+TGG - chr1_1:70459776-70459795 None:intergenic 30.0%
AACAAGGAAACAAATGAACT+TGG + chr1_1:70459900-70459919 Msa0040330:five_prime_UTR 30.0%
!! ATGAAGTAGAAGTGTCAAAA+TGG + chr1_1:70460000-70460019 Msa0040330:exon 30.0%
!! TGAAGTAGAAGTGTCAAAAT+GGG + chr1_1:70460001-70460020 Msa0040330:exon 30.0%
! AGTTACTGTTTTCCTTCTTT+AGG + chr1_1:70460374-70460393 Msa0040330:intron 30.0%
ACAATCAAAAAGAGCAAAAC+AGG + chr1_1:70460449-70460468 Msa0040330:CDS 30.0%
AAAGGGAATGATTCAAGAAA+TGG - chr1_1:70460479-70460498 None:intergenic 30.0%
TACCATCAAGAACTTCAAAA+GGG - chr1_1:70460496-70460515 None:intergenic 30.0%
ATACCATCAAGAACTTCAAA+AGG - chr1_1:70460497-70460516 None:intergenic 30.0%
TTGTGCAAATGTAAATATCG+GGG - chr1_1:70460532-70460551 None:intergenic 30.0%
CTTGTGCAAATGTAAATATC+GGG - chr1_1:70460533-70460552 None:intergenic 30.0%
TCATCTACACTCAAATTACT+TGG - chr1_1:70460793-70460812 None:intergenic 30.0%
GTAATTTGAGTGTAGATGAT+TGG + chr1_1:70460794-70460813 Msa0040330:CDS 30.0%
TGAAGTTGGCATTAATTGTT+CGG + chr1_1:70460893-70460912 Msa0040330:intron 30.0%
GTCATTTGTAAAGCAGTTAA+GGG - chr1_1:70461098-70461117 None:intergenic 30.0%
! TGTCATTTGTAAAGCAGTTA+AGG - chr1_1:70461099-70461118 None:intergenic 30.0%
AAGACATTAAACAATCTTCC+TGG + chr1_1:70461244-70461263 Msa0040330:CDS 30.0%
ACTTTGATCCTAGTTTAAGA+TGG + chr1_1:70461503-70461522 Msa0040330:CDS 30.0%
! CTTTGATCCTAGTTTAAGAT+GGG + chr1_1:70461504-70461523 Msa0040330:CDS 30.0%
! TTTGATCCTAGTTTAAGATG+GGG + chr1_1:70461505-70461524 Msa0040330:CDS 30.0%
! GGCTTATATGAGAGTTATTT+TGG + chr1_1:70461942-70461961 Msa0040330:intron 30.0%
!!! TTATTTTGGTTGGATTTTGC+AGG + chr1_1:70461956-70461975 Msa0040330:intron 30.0%
!!! TATTTTGGTTGGATTTTGCA+GGG + chr1_1:70461957-70461976 Msa0040330:intron 30.0%
TGGAGATTCTTAAAAAGACA+AGG + chr1_1:70462090-70462109 Msa0040330:CDS 30.0%
TGACTACTTCTATTAGTGTT+TGG + chr1_1:70462247-70462266 Msa0040330:intron 30.0%
TGTCATAGTATCAACAGTTA+AGG - chr1_1:70462631-70462650 None:intergenic 30.0%
TTGAGAATAGAGCAAAAAAG+AGG + chr1_1:70462652-70462671 Msa0040330:CDS 30.0%
AGATTATCACATCACCTAAT+AGG + chr1_1:70462804-70462823 Msa0040330:intron 30.0%
! ACCTGTTTATGGCATATTTT+GGG + chr1_1:70463001-70463020 Msa0040330:CDS 30.0%
!! AACTTTTTCTAAAGAAGGGA+AGG + chr1_1:70463131-70463150 Msa0040330:exon 30.0%
!! AAAAGGTACTTGAATATGGA+TGG - chr1_1:70463174-70463193 None:intergenic 30.0%
CATGATTATGAGAGTCTATA+AGG - chr1_1:70463202-70463221 None:intergenic 30.0%
AACATAATAGAGTGGAATAG+TGG + chr1_1:70463443-70463462 Msa0040330:intron 30.0%
AAAATCCCTATTGGTAAAAG+GGG - chr1_1:70463883-70463902 None:intergenic 30.0%
GTAAAATCCCTATTGGTAAA+AGG - chr1_1:70463885-70463904 None:intergenic 30.0%
CTTCAAAGTAAAATCCCTAT+TGG - chr1_1:70463892-70463911 None:intergenic 30.0%
TTGAAGAAATACTTTCATGG+AGG + chr1_1:70463906-70463925 Msa0040330:three_prime_UTR 30.0%
TGAAGAAATACTTTCATGGA+GGG + chr1_1:70463907-70463926 Msa0040330:three_prime_UTR 30.0%
!! TTTTTCGGTATATGGGAAAT+GGG - chr1_1:70463949-70463968 None:intergenic 30.0%
!!! ACTAACCTTTTTCGGTATAT+GGG - chr1_1:70463956-70463975 None:intergenic 30.0%
!!! AACTAACCTTTTTCGGTATA+TGG - chr1_1:70463957-70463976 None:intergenic 30.0%
!! ATGAGAGTTTTGATGTATAG+TGG + chr1_1:70464415-70464434 Msa0040330:three_prime_UTR 30.0%
TAGAACAAGACAATGCAGTA+AGG - chr1_1:70459725-70459744 None:intergenic 35.0%
ATCACTGAAATATCAGAAGC+TGG + chr1_1:70459944-70459963 Msa0040330:five_prime_UTR 35.0%
! GTTTGATGAATTAGCTCTCA+TGG + chr1_1:70460136-70460155 Msa0040330:intron 35.0%
! TACTGTTTTCCTTCTTTAGG+AGG + chr1_1:70460377-70460396 Msa0040330:intron 35.0%
!! TTGCTCTTTTTGATTGTGCA+TGG - chr1_1:70460446-70460465 None:intergenic 35.0%
!!! TTCCCTTTTGAAGTTCTTGA+TGG + chr1_1:70460491-70460510 Msa0040330:intron 35.0%
TGTGCAAATGTAAATATCGG+GGG - chr1_1:70460531-70460550 None:intergenic 35.0%
TTATCGATGTGCAGAACTAT+AGG + chr1_1:70460646-70460665 Msa0040330:CDS 35.0%
CTTGGTAAAATTGGAGAAGT+AGG - chr1_1:70460675-70460694 None:intergenic 35.0%
! TACACTCAAATTACTTGGTG+GGG - chr1_1:70460788-70460807 None:intergenic 35.0%
CTACACTCAAATTACTTGGT+GGG - chr1_1:70460789-70460808 None:intergenic 35.0%
TCTACACTCAAATTACTTGG+TGG - chr1_1:70460790-70460809 None:intergenic 35.0%
CAGCTGACATTTATGTTCTT+GGG + chr1_1:70460833-70460852 Msa0040330:CDS 35.0%
TTATAGTCTTCTCCTGAAGT+TGG + chr1_1:70460879-70460898 Msa0040330:intron 35.0%
GAACAATTAATGCCAACTTC+AGG - chr1_1:70460894-70460913 None:intergenic 35.0%
GAGACTTGTAAGTGTGTATA+GGG - chr1_1:70460967-70460986 None:intergenic 35.0%
AGAGACTTGTAAGTGTGTAT+AGG - chr1_1:70460968-70460987 None:intergenic 35.0%
! ACACTTACAAGTCTCTAAAG+AGG + chr1_1:70460972-70460991 Msa0040330:intron 35.0%
! CACTTACAAGTCTCTAAAGA+GGG + chr1_1:70460973-70460992 Msa0040330:intron 35.0%
AAAGAGGGACAACAAGTATA+CGG + chr1_1:70460988-70461007 Msa0040330:intron 35.0%
!! TAGGACTAAAAAGTTGGTAC+AGG + chr1_1:70461023-70461042 Msa0040330:intron 35.0%
!! AGGACTAAAAAGTTGGTACA+GGG + chr1_1:70461024-70461043 Msa0040330:intron 35.0%
TCTTGAAATCTGCAAGAGAA+AGG - chr1_1:70461145-70461164 None:intergenic 35.0%
!!! GATAAGAGCCAACCATTTTT+TGG - chr1_1:70461221-70461240 None:intergenic 35.0%
AGAATTCGTCTTTCTTCCAT+AGG + chr1_1:70461359-70461378 Msa0040330:CDS 35.0%
! GTTTGCGATCGTGTAATTTT+CGG + chr1_1:70461466-70461485 Msa0040330:CDS 35.0%
! ATCGTGTAATTTTCGGTAAC+AGG + chr1_1:70461473-70461492 Msa0040330:CDS 35.0%
AAACTAGGATCAAAGTCACT+AGG - chr1_1:70461499-70461518 None:intergenic 35.0%
CTATAACCCCATCTTAAACT+AGG - chr1_1:70461514-70461533 None:intergenic 35.0%
! CTAGTTTAAGATGGGGTTAT+AGG + chr1_1:70461512-70461531 Msa0040330:CDS 35.0%
GCTATATCCATCTTCATTAG+AGG - chr1_1:70461677-70461696 None:intergenic 35.0%
!! AACATGAAAGTATCGTGTGT+TGG + chr1_1:70461796-70461815 Msa0040330:CDS 35.0%
GATGGGATATCTAGGAAATA+AGG + chr1_1:70461828-70461847 Msa0040330:CDS 35.0%
AAATGATGGTTGCTTAGGAT+TGG + chr1_1:70461921-70461940 Msa0040330:intron 35.0%
!!! ATTTTGGTTGGATTTTGCAG+GGG + chr1_1:70461958-70461977 Msa0040330:intron 35.0%
CACAGACATACTAATTGAGA+TGG - chr1_1:70461985-70462004 None:intergenic 35.0%
AAGATCCGCAGAATAACTAA+TGG + chr1_1:70462300-70462319 Msa0040330:intron 35.0%
TGTAGTCGAATTATATGGCT+TGG + chr1_1:70462456-70462475 Msa0040330:intron 35.0%
GGCTTGGAGATTTGAATTAT+CGG + chr1_1:70462472-70462491 Msa0040330:CDS 35.0%
! CACTTGTTGAGATGCAAAAT+TGG + chr1_1:70462523-70462542 Msa0040330:CDS 35.0%
! GTTGAATACTTGTAAGTTGG+AGG - chr1_1:70462718-70462737 None:intergenic 35.0%
ACTAATTCAGATCGATACTC+AGG + chr1_1:70462736-70462755 Msa0040330:CDS 35.0%
ATGTGATAATCTTACCAAGC+AGG - chr1_1:70462796-70462815 None:intergenic 35.0%
CTTCTCCATACCATAGAATA+CGG - chr1_1:70462929-70462948 None:intergenic 35.0%
CATCAATTGTCTTATGTTCG+CGG + chr1_1:70462954-70462973 Msa0040330:CDS 35.0%
! GACCTGTTTATGGCATATTT+TGG + chr1_1:70463000-70463019 Msa0040330:CDS 35.0%
! CTTTTCTTCAATTTTCCGTG+AGG - chr1_1:70463041-70463060 None:intergenic 35.0%
TTCTCAGTCAAGAATTGAGT+TGG + chr1_1:70463070-70463089 Msa0040330:CDS 35.0%
! GTTTAGTTCAGTATATCCAC+CGG - chr1_1:70463114-70463133 None:intergenic 35.0%
GAGTCTATAAGGGATAGAAA+AGG - chr1_1:70463191-70463210 None:intergenic 35.0%
! ACCAAAAGTACAAGATTCTG+AGG + chr1_1:70463396-70463415 Msa0040330:intron 35.0%
! GAGGCTGTAACTGATTTATA+TGG + chr1_1:70463415-70463434 Msa0040330:intron 35.0%
TGGACTTGAACATAATAGAG+TGG + chr1_1:70463435-70463454 Msa0040330:intron 35.0%
AAGCTATCTTGGAGAGTTAA+TGG - chr1_1:70463646-70463665 None:intergenic 35.0%
!!! CCATTTTCTGAAACAGTAAC+AGG - chr1_1:70463859-70463878 None:intergenic 35.0%
CCTGTTACTGTTTCAGAAAA+TGG + chr1_1:70463856-70463875 Msa0040330:intron 35.0%
!!! CTTTTTCGGTATATGGGAAA+TGG - chr1_1:70463950-70463969 None:intergenic 35.0%
CATTTCCCATATACCGAAAA+AGG + chr1_1:70463948-70463967 Msa0040330:three_prime_UTR 35.0%
GCACTCACAAGAAGAAAACA+AGG + chr1_1:70459884-70459903 Msa0040330:five_prime_UTR 40.0%
TGAAATATCAGAAGCTGGCT+TGG + chr1_1:70459949-70459968 Msa0040330:five_prime_UTR 40.0%
! GAAATATCAGAAGCTGGCTT+GGG + chr1_1:70459950-70459969 Msa0040330:five_prime_UTR 40.0%
TGAGAATTCCAAGAACACCA+AGG + chr1_1:70460027-70460046 Msa0040330:CDS 40.0%
!! GTCAAAAACCTTGGTGTTCT+TGG - chr1_1:70460038-70460057 None:intergenic 40.0%
GCTCTCATGGTCAAAGAAAA+TGG + chr1_1:70460149-70460168 Msa0040330:intron 40.0%
! CAAGCAGATGCTGTTGTTTA+TGG + chr1_1:70460213-70460232 Msa0040330:CDS 40.0%
!! TTTTCCTTCTTTAGGAGGTG+AGG + chr1_1:70460382-70460401 Msa0040330:intron 40.0%
TTAGGAGGTGAGGTTGAATA+TGG + chr1_1:70460392-70460411 Msa0040330:intron 40.0%
GTGAGGTTGAATATGGAAGT+AGG + chr1_1:70460399-70460418 Msa0040330:CDS 40.0%
TCTCTGTTCACAGCAATGAA+GGG - chr1_1:70460566-70460585 None:intergenic 40.0%
TTCTCTGTTCACAGCAATGA+AGG - chr1_1:70460567-70460586 None:intergenic 40.0%
TGTGAACAGAGAAGTTTAGC+AGG + chr1_1:70460574-70460593 Msa0040330:intron 40.0%
TTCTGCACATCGATAATTCG+AGG - chr1_1:70460642-70460661 None:intergenic 40.0%
! GCAGCATTTTTGTAGCTACA+TGG + chr1_1:70460746-70460765 Msa0040330:intron 40.0%
AGAACATAAATGTCAGCTGG+TGG - chr1_1:70460832-70460851 None:intergenic 40.0%
CCAAGAACATAAATGTCAGC+TGG - chr1_1:70460835-70460854 None:intergenic 40.0%
CCAGCTGACATTTATGTTCT+TGG + chr1_1:70460832-70460851 Msa0040330:CDS 40.0%
! GGGTAAGAATTGTTGCTTGA+CGG + chr1_1:70460853-70460872 Msa0040330:intron 40.0%
AGGATATTACCGGCATTCAA+CGG - chr1_1:70461175-70461194 None:intergenic 40.0%
TTGAATGCCGGTAATATCCT+AGG + chr1_1:70461175-70461194 Msa0040330:CDS 40.0%
TGAATGCCGGTAATATCCTA+GGG + chr1_1:70461176-70461195 Msa0040330:CDS 40.0%
ATAACATCCACTACTTCCAC+TGG - chr1_1:70461272-70461291 None:intergenic 40.0%
CTGTATCTTCGATCAACTTG+TGG - chr1_1:70461445-70461464 None:intergenic 40.0%
ATAGGCCTAGTGACTATTCA+AGG + chr1_1:70461530-70461549 Msa0040330:CDS 40.0%
TAGGCCTAGTGACTATTCAA+GGG + chr1_1:70461531-70461550 Msa0040330:CDS 40.0%
ACCGAGTGACTATTCAAGAT+GGG + chr1_1:70461570-70461589 Msa0040330:CDS 40.0%
GGTGAATATAAGACGGTACT+CGG - chr1_1:70461631-70461650 None:intergenic 40.0%
GGACATCGGTGAATATAAGA+CGG - chr1_1:70461638-70461657 None:intergenic 40.0%
TATTCACCGATGTCCACTAA+TGG + chr1_1:70461643-70461662 Msa0040330:CDS 40.0%
GTTGCAAGTAAGCAAATGGT+GGG + chr1_1:70461724-70461743 Msa0040330:CDS 40.0%
AGAGGATTGATGGGATATCT+AGG + chr1_1:70461820-70461839 Msa0040330:CDS 40.0%
GGTGAAAATGATGGTTGCTT+AGG + chr1_1:70461916-70461935 Msa0040330:intron 40.0%
ATCTGCAGTCATTTAACCTC+AGG + chr1_1:70462026-70462045 Msa0040330:CDS 40.0%
TTTAACCTCAGGACAGAAAG+AGG + chr1_1:70462037-70462056 Msa0040330:CDS 40.0%
TTAACCTCAGGACAGAAAGA+GGG + chr1_1:70462038-70462057 Msa0040330:CDS 40.0%
ATATGCACCCCAAGGAAAAA+AGG + chr1_1:70462764-70462783 Msa0040330:CDS 40.0%
!!! GTGTTCTCCTTTTTTCCTTG+GGG - chr1_1:70462774-70462793 None:intergenic 40.0%
!!! GGTGTTCTCCTTTTTTCCTT+GGG - chr1_1:70462775-70462794 None:intergenic 40.0%
!!! AGGTGTTCTCCTTTTTTCCT+TGG - chr1_1:70462776-70462795 None:intergenic 40.0%
AAAAAAGGAGAACACCTGCT+TGG + chr1_1:70462779-70462798 Msa0040330:CDS 40.0%
ATAGGTGTGACCGTATTCTA+TGG + chr1_1:70462916-70462935 Msa0040330:intron 40.0%
TGTGACCGTATTCTATGGTA+TGG + chr1_1:70462921-70462940 Msa0040330:CDS 40.0%
CGTATTCTATGGTATGGAGA+AGG + chr1_1:70462927-70462946 Msa0040330:CDS 40.0%
CGCGAACATAAGACAATTGA+TGG - chr1_1:70462956-70462975 None:intergenic 40.0%
ATATGCCATAAACAGGTCTG+TGG - chr1_1:70462998-70463017 None:intergenic 40.0%
GCCCAAAATATGCCATAAAC+AGG - chr1_1:70463005-70463024 None:intergenic 40.0%
GAAGAACTTCTGCCATATTC+CGG + chr1_1:70463092-70463111 Msa0040330:CDS 40.0%
TCAGTATATCCACCGGAATA+TGG - chr1_1:70463107-70463126 None:intergenic 40.0%
! GCCTCAGAATCTTGTACTTT+TGG - chr1_1:70463400-70463419 None:intergenic 40.0%
! AATGGTCCCCTTTTACCAAT+AGG + chr1_1:70463874-70463893 Msa0040330:three_prime_UTR 40.0%
! ATGGTCCCCTTTTACCAATA+GGG + chr1_1:70463875-70463894 Msa0040330:three_prime_UTR 40.0%
TTTCATGGAGGGAGATAGAT+AGG + chr1_1:70463918-70463937 Msa0040330:three_prime_UTR 40.0%
TTCATGGAGGGAGATAGATA+GGG + chr1_1:70463919-70463938 Msa0040330:three_prime_UTR 40.0%
! ACTCAGCACAAGAGAGTTTT+TGG - chr1_1:70464509-70464528 None:intergenic 40.0%
! CCAAATTTGCATGCCTCTTT+TGG - chr1_1:70464648-70464667 None:intergenic 40.0%
! CCAAAAGAGGCATGCAAATT+TGG + chr1_1:70464645-70464664 Msa0040330:three_prime_UTR 40.0%
! GGAGGTGTAGAAACTTGCTT+GGG + chr1_1:70459971-70459990 Msa0040330:five_prime_UTR 45.0%
! GCAGATGCTGTTGTTTATGG+AGG + chr1_1:70460216-70460235 Msa0040330:CDS 45.0%
TCAACCTCACCTCCTAAAGA+AGG - chr1_1:70460389-70460408 None:intergenic 45.0%
GCACATCGATAATTCGAGGA+TGG - chr1_1:70460638-70460657 None:intergenic 45.0%
GTAGCTACATGGAATGTAGC+TGG + chr1_1:70460757-70460776 Msa0040330:CDS 45.0%
! ATAAATGTCAGCTGGTGGTG+AGG - chr1_1:70460827-70460846 None:intergenic 45.0%
GAGATAGTTCCGTTGAATGC+CGG + chr1_1:70461163-70461182 Msa0040330:CDS 45.0%
GAATGCCGGTAATATCCTAG+GGG + chr1_1:70461177-70461196 Msa0040330:CDS 45.0%
ACAATGGCCCTGCCAAAAAA+TGG + chr1_1:70461206-70461225 Msa0040330:CDS 45.0%
!!! GAGCCAACCATTTTTTGGCA+GGG - chr1_1:70461216-70461235 None:intergenic 45.0%
!!! AGAGCCAACCATTTTTTGGC+AGG - chr1_1:70461217-70461236 None:intergenic 45.0%
AACAATCTTCCTGGAACCAG+TGG + chr1_1:70461253-70461272 Msa0040330:CDS 45.0%
TCTACAACTGGCTGAGGAAT+TGG - chr1_1:70461304-70461323 None:intergenic 45.0%
TCTGCATTCAGCTCTACAAC+TGG - chr1_1:70461316-70461335 None:intergenic 45.0%
AGAGCTGAATGCAGATTTCG+AGG + chr1_1:70461321-70461340 Msa0040330:CDS 45.0%
GAGCTGAATGCAGATTTCGA+GGG + chr1_1:70461322-70461341 Msa0040330:CDS 45.0%
TCGTTCCAGACAACTTCTAG+TGG + chr1_1:70461385-70461404 Msa0040330:CDS 45.0%
TCCAGACAACTTCTAGTGGT+TGG + chr1_1:70461389-70461408 Msa0040330:CDS 45.0%
CCAGACAACTTCTAGTGGTT+GGG + chr1_1:70461390-70461409 Msa0040330:CDS 45.0%
CAGACAACTTCTAGTGGTTG+GGG + chr1_1:70461391-70461410 Msa0040330:CDS 45.0%
AACTTCTAGTGGTTGGGGAA+TGG + chr1_1:70461396-70461415 Msa0040330:CDS 45.0%
ACTTGTGGTTGCACAAGTGA+AGG - chr1_1:70461430-70461449 None:intergenic 45.0%
CTTGCCCTTGAATAGTCACT+AGG - chr1_1:70461538-70461557 None:intergenic 45.0%
GACCGAGTGACTATTCAAGA+TGG + chr1_1:70461569-70461588 Msa0040330:CDS 45.0%
CCCCATCTTGAATAGTCACT+CGG - chr1_1:70461574-70461593 None:intergenic 45.0%
CCGAGTGACTATTCAAGATG+GGG + chr1_1:70461571-70461590 Msa0040330:CDS 45.0%
! GGTTCGTCTGATGATGACAA+TGG + chr1_1:70461592-70461611 Msa0040330:CDS 45.0%
! TGATGATGACAATGGCCTTG+TGG + chr1_1:70461600-70461619 Msa0040330:CDS 45.0%
! GATCCACCATTAGTGGACAT+CGG - chr1_1:70461652-70461671 None:intergenic 45.0%
GGATCTGCCTCTAATGAAGA+TGG + chr1_1:70461667-70461686 Msa0040330:CDS 45.0%
GAAGATGGATATAGCATGCC+AGG + chr1_1:70461682-70461701 Msa0040330:CDS 45.0%
ATAGCATGCCAGGACATTCA+AGG + chr1_1:70461692-70461711 Msa0040330:CDS 45.0%
CCATTTGCTTACTTGCAACG+AGG - chr1_1:70461723-70461742 None:intergenic 45.0%
CCTCGTTGCAAGTAAGCAAA+TGG + chr1_1:70461720-70461739 Msa0040330:CDS 45.0%
CGTTGCAAGTAAGCAAATGG+TGG + chr1_1:70461723-70461742 Msa0040330:CDS 45.0%
TGGGAATCTACCTTACCGTA+TGG + chr1_1:70461743-70461762 Msa0040330:CDS 45.0%
GGGAATCTACCTTACCGTAT+GGG + chr1_1:70461744-70461763 Msa0040330:CDS 45.0%
TACCTTACCGTATGGGTGAA+AGG + chr1_1:70461751-70461770 Msa0040330:CDS 45.0%
!! AAAGTATCGTGTGTTGGCAG+AGG + chr1_1:70461802-70461821 Msa0040330:CDS 45.0%
! TGTGTTGGCAGAGGATTGAT+GGG + chr1_1:70461811-70461830 Msa0040330:CDS 45.0%
ACAAGGTTTCCTCGTGTTCA+TGG + chr1_1:70462107-70462126 Msa0040330:CDS 45.0%
! AAAAAGAGGCCGAGCTTTTG+TGG + chr1_1:70462666-70462685 Msa0040330:CDS 45.0%
! AAAAGAGGCCGAGCTTTTGT+GGG + chr1_1:70462667-70462686 Msa0040330:CDS 45.0%
! CTTTTGTGGGATGGAACGAA+GGG + chr1_1:70462680-70462699 Msa0040330:CDS 45.0%
TCAGACCACAGACCTGTTTA+TGG + chr1_1:70462990-70463009 Msa0040330:CDS 45.0%
!! TTATGGCATATTTTGGGCCG+AGG + chr1_1:70463007-70463026 Msa0040330:CDS 45.0%
GACAGGGTCATGTTTGCTTA+GGG - chr1_1:70463333-70463352 None:intergenic 45.0%
AAACATGACCCTGTCCCAAA+AGG + chr1_1:70463338-70463357 Msa0040330:intron 45.0%
AACATGACCCTGTCCCAAAA+GGG + chr1_1:70463339-70463358 Msa0040330:intron 45.0%
! AAAAGTTTGGGCCCCCTTTT+GGG - chr1_1:70463355-70463374 None:intergenic 45.0%
!!! AAGATTTTTTAATTATTTTT+AGG + chr1_1:70464300-70464319 Msa0040330:three_prime_UTR 5.0%
!!! AGATTTTTTAATTATTTTTA+GGG + chr1_1:70464301-70464320 Msa0040330:three_prime_UTR 5.0%
!! ATATCAGAAGCTGGCTTGGG+AGG + chr1_1:70459953-70459972 Msa0040330:five_prime_UTR 50.0%
! GGGAGGTGTAGAAACTTGCT+TGG + chr1_1:70459970-70459989 Msa0040330:five_prime_UTR 50.0%
! GGTGTAGAAACTTGCTTGGG+AGG + chr1_1:70459974-70459993 Msa0040330:five_prime_UTR 50.0%
CTCTGCCCCTAGGATATTAC+CGG - chr1_1:70461185-70461204 None:intergenic 50.0%
TGGCCCTGCCAAAAAATGGT+TGG + chr1_1:70461210-70461229 Msa0040330:CDS 50.0%
ACTGGCTGAGGAATTGGAGA+CGG - chr1_1:70461298-70461317 None:intergenic 50.0%
TTCAGCTCTACAACTGGCTG+AGG - chr1_1:70461310-70461329 None:intergenic 50.0%
CAGATTTCGAGGGATCAGCT+AGG + chr1_1:70461332-70461351 Msa0040330:CDS 50.0%
! TTGTCTGGAACGATCGCCTA+TGG - chr1_1:70461378-70461397 None:intergenic 50.0%
CCCAACCACTAGAAGTTGTC+TGG - chr1_1:70461393-70461412 None:intergenic 50.0%
TCACCGATGTCCACTAATGG+TGG + chr1_1:70461646-70461665 Msa0040330:CDS 50.0%
AGAGGCAGATCCACCATTAG+TGG - chr1_1:70461659-70461678 None:intergenic 50.0%
AGGCAGTACCTTGAATGTCC+TGG - chr1_1:70461703-70461722 None:intergenic 50.0%
CAGTTCGCCTTTCACCCATA+CGG - chr1_1:70461761-70461780 None:intergenic 50.0%
! GTGTGTTGGCAGAGGATTGA+TGG + chr1_1:70461810-70461829 Msa0040330:CDS 50.0%
ATCACCCTCTTTCTGTCCTG+AGG - chr1_1:70462045-70462064 None:intergenic 50.0%
TTGTCAACGCCATGAACACG+AGG - chr1_1:70462119-70462138 None:intergenic 50.0%
AAGACTCTTACTCGTGCTCG+AGG - chr1_1:70462163-70462182 None:intergenic 50.0%
CAACAAGTGCCTTAGCAGAG+CGG - chr1_1:70462512-70462531 None:intergenic 50.0%
CGTTCCATCCCACAAAAGCT+CGG - chr1_1:70462678-70462697 None:intergenic 50.0%
! GCTTTTGTGGGATGGAACGA+AGG + chr1_1:70462679-70462698 Msa0040330:CDS 50.0%
AGGAGATGATATGCACCCCA+AGG + chr1_1:70462756-70462775 Msa0040330:CDS 50.0%
GAACTTCTGCCATATTCCGG+TGG + chr1_1:70463095-70463114 Msa0040330:CDS 50.0%
GGACAGGGTCATGTTTGCTT+AGG - chr1_1:70463334-70463353 None:intergenic 50.0%
ACATGACCCTGTCCCAAAAG+GGG + chr1_1:70463340-70463359 Msa0040330:intron 50.0%
! GAAAAGTTTGGGCCCCCTTT+TGG - chr1_1:70463356-70463375 None:intergenic 50.0%
ATCAGCACTTGTGAGACTGC+TGG + chr1_1:70463568-70463587 Msa0040330:intron 50.0%
! GCAGGAGCACGAGTCAAGTT+AGG + chr1_1:70460592-70460611 Msa0040330:CDS 55.0%
AGCACGAGTCAAGTTAGGCG+AGG + chr1_1:70460597-70460616 Msa0040330:CDS 55.0%
CGGTAATATCCTAGGGGCAG+AGG + chr1_1:70461183-70461202 Msa0040330:CDS 55.0%
ATCCTAGGGGCAGAGGACAA+TGG + chr1_1:70461190-70461209 Msa0040330:CDS 55.0%
!! CCACTACTTCCACTGGTTCC+AGG - chr1_1:70461265-70461284 None:intergenic 55.0%
CCTGGAACCAGTGGAAGTAG+TGG + chr1_1:70461262-70461281 Msa0040330:CDS 55.0%
! CGGTACTCGGTGAATCCACA+AGG - chr1_1:70461618-70461637 None:intergenic 55.0%
CGCCTTTCACCCATACGGTA+AGG - chr1_1:70461756-70461775 None:intergenic 55.0%
TCGTGCTCGAGGATTGTCTG+AGG - chr1_1:70462152-70462171 None:intergenic 55.0%
TCTCTCCTACCGCTCTGCTA+AGG + chr1_1:70462500-70462519 Msa0040330:CDS 55.0%
AAGTGCCTTAGCAGAGCGGT+AGG - chr1_1:70462508-70462527 None:intergenic 55.0%
TCCGTGAGGTGACTCAACCT+CGG - chr1_1:70463027-70463046 None:intergenic 55.0%
CATGACCCTGTCCCAAAAGG+GGG + chr1_1:70463341-70463360 Msa0040330:intron 55.0%
! GAGGCCGAGCTTTTGTGGGA+TGG + chr1_1:70462671-70462690 Msa0040330:CDS 60.0%
GCCGAGGTTGAGTCACCTCA+CGG + chr1_1:70463023-70463042 Msa0040330:CDS 60.0%
!!! TTGGGCCCCCTTTTGGGACA+GGG - chr1_1:70463349-70463368 None:intergenic 60.0%
!!! TTTGGGCCCCCTTTTGGGAC+AGG - chr1_1:70463350-70463369 None:intergenic 60.0%
GGCCATTGTCCTCTGCCCCT+AGG - chr1_1:70461195-70461214 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 70459694 70464668 70459694 ID=Msa0040330;Name=Msa0040330
chr1_1 mRNA 70459694 70464668 70459694 ID=Msa0040330-mRNA-1;Parent=Msa0040330;Name=Msa0040330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=325|1|1|1|0.75|0.69|13|651|583
chr1_1 exon 70459694 70460048 70459694 ID=Msa0040330-mRNA-1:exon:23187;Parent=Msa0040330-mRNA-1
chr1_1 exon 70460150 70460237 70460150 ID=Msa0040330-mRNA-1:exon:23188;Parent=Msa0040330-mRNA-1
chr1_1 exon 70460396 70460470 70460396 ID=Msa0040330-mRNA-1:exon:23189;Parent=Msa0040330-mRNA-1
chr1_1 exon 70460583 70460667 70460583 ID=Msa0040330-mRNA-1:exon:23190;Parent=Msa0040330-mRNA-1
chr1_1 exon 70460750 70460854 70460750 ID=Msa0040330-mRNA-1:exon:23191;Parent=Msa0040330-mRNA-1
chr1_1 exon 70461156 70461849 70461156 ID=Msa0040330-mRNA-1:exon:23192;Parent=Msa0040330-mRNA-1
chr1_1 exon 70461978 70462171 70461978 ID=Msa0040330-mRNA-1:exon:23193;Parent=Msa0040330-mRNA-1
chr1_1 exon 70462461 70462569 70462461 ID=Msa0040330-mRNA-1:exon:23194;Parent=Msa0040330-mRNA-1
chr1_1 exon 70462652 70462800 70462652 ID=Msa0040330-mRNA-1:exon:23195;Parent=Msa0040330-mRNA-1
chr1_1 exon 70462920 70463184 70462920 ID=Msa0040330-mRNA-1:exon:23196;Parent=Msa0040330-mRNA-1
chr1_1 exon 70463872 70463969 70463872 ID=Msa0040330-mRNA-1:exon:23197;Parent=Msa0040330-mRNA-1
chr1_1 exon 70464062 70464175 70464062 ID=Msa0040330-mRNA-1:exon:23198;Parent=Msa0040330-mRNA-1
chr1_1 exon 70464272 70464668 70464272 ID=Msa0040330-mRNA-1:exon:23199;Parent=Msa0040330-mRNA-1
chr1_1 five_prime_UTR 70459694 70460018 70459694 ID=Msa0040330-mRNA-1:five_prime_utr;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70460019 70460048 70460019 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70460150 70460237 70460150 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70460396 70460470 70460396 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70460583 70460667 70460583 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70460750 70460854 70460750 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70461156 70461849 70461156 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70461978 70462171 70461978 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70462461 70462569 70462461 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70462652 70462800 70462652 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 CDS 70462920 70463142 70462920 ID=Msa0040330-mRNA-1:cds;Parent=Msa0040330-mRNA-1
chr1_1 three_prime_UTR 70463143 70463184 70463143 ID=Msa0040330-mRNA-1:three_prime_utr;Parent=Msa0040330-mRNA-1
chr1_1 three_prime_UTR 70463872 70463969 70463872 ID=Msa0040330-mRNA-1:three_prime_utr;Parent=Msa0040330-mRNA-1
chr1_1 three_prime_UTR 70464062 70464175 70464062 ID=Msa0040330-mRNA-1:three_prime_utr;Parent=Msa0040330-mRNA-1
chr1_1 three_prime_UTR 70464272 70464668 70464272 ID=Msa0040330-mRNA-1:three_prime_utr;Parent=Msa0040330-mRNA-1
Gene Sequence

>Msa0040330

ATGGGAGATGAGAATTCCAAGAACACCAAGCTCTCATGGTCAAAGAAAATGGTTAGAAAGTTTTTTAATTTCAAAAGCAAATGTGAAGATATTCAAGCAGATGCTGTTGTTTATGGAGGAGGTGAGGTTGAATATGGAAGTAGGAATAGCTTCTCTGAGAGAGAACCATGCACAATCAAAAAGAGCAAAACAGAGAAGTTTAGCAGGAGCACGAGTCAAGTTAGGCGAGGAAGAATGAATCTTGACCATCCTCGAATTATCGATGTGCAGAACTATAGCATTTTTGTAGCTACATGGAATGTAGCTGGAAGATCCCCACCAAGTAATTTGAGTGTAGATGATTGGCTTCATTCCTCACCACCAGCTGACATTTATGTTCTTGGATTTCAAGAGATAGTTCCGTTGAATGCCGGTAATATCCTAGGGGCAGAGGACAATGGCCCTGCCAAAAAATGGTTGGCTCTTATCAGAAAGACATTAAACAATCTTCCTGGAACCAGTGGAAGTAGTGGATGTTATACACCGTCTCCAATTCCTCAGCCAGTTGTAGAGCTGAATGCAGATTTCGAGGGATCAGCTAGGCAGAAGAATTCGTCTTTCTTCCATAGGCGATCGTTCCAGACAACTTCTAGTGGTTGGGGAATGGACAATGATCCTTCACTTGTGCAACCACAAGTTGATCGAAGATACAGTGTTTGCGATCGTGTAATTTTCGGTAACAGGCCTAGTGACTTTGATCCTAGTTTAAGATGGGGTTATAGGCCTAGTGACTATTCAAGGGCAAGTGACTACTCGAGACCGAGTGACTATTCAAGATGGGGTTCGTCTGATGATGACAATGGCCTTGTGGATTCACCGAGTACCGTCTTATATTCACCGATGTCCACTAATGGTGGATCTGCCTCTAATGAAGATGGATATAGCATGCCAGGACATTCAAGGTACTGCCTCGTTGCAAGTAAGCAAATGGTGGGAATCTACCTTACCGTATGGGTGAAAGGCGAACTGAAAGATCATGTTCGAAACATGAAAGTATCGTGTGTTGGCAGAGGATTGATGGGATATCTAGGAAATAAGGGGTCCATCTCAATTAGTATGTCTGTGCACGAAACAAGCTTTTGCTTTATCTGCAGTCATTTAACCTCAGGACAGAAAGAGGGTGATGAACTAAGAAGAAATTCTGATGTAATGGAGATTCTTAAAAAGACAAGGTTTCCTCGTGTTCATGGCGTTGACAACGAGAAATCTCCTCAGACAATCCTCGAGCACGATCGAATTATATGGCTTGGAGATTTGAATTATCGGATCGCTCTCTCCTACCGCTCTGCTAAGGCACTTGTTGAGATGCAAAATTGGAGAGCATTGTTAGAAAATGATCAATTGAGAATAGAGCAAAAAAGAGGCCGAGCTTTTGTGGGATGGAACGAAGGGAAGATATATTTTCCTCCAACTTACAAGTATTCAACTAATTCAGATCGATACTCAGGAGATGATATGCACCCCAAGGAAAAAAGGAGAACACCTGCTTGGTGTGACCGTATTCTATGGTATGGAGAAGGTCTCCATCAATTGTCTTATGTTCGCGGTGAATCAAGATTTTCAGACCACAGACCTGTTTATGGCATATTTTGGGCCGAGGTTGAGTCACCTCACGGAAAATTGAAGAAAAGTATGAGCTGTTCTCAGTCAAGAATTGAGTTGGAAGAACTTCTGCCATATTCCGGTGGATATACTGAACTAAACTTTTTCTAA
Protein sequence

>Msa0040330

MGDENSKNTKLSWSKKMVRKFFNFKSKCEDIQADAVVYGGGEVEYGSRNSFSEREPCTIKKSKTEKFSRSTSQVRRGRMNLDHPRIIDVQNYSIFVATWNVAGRSPPSNLSVDDWLHSSPPADIYVLGFQEIVPLNAGNILGAEDNGPAKKWLALIRKTLNNLPGTSGSSGCYTPSPIPQPVVELNADFEGSARQKNSSFFHRRSFQTTSSGWGMDNDPSLVQPQVDRRYSVCDRVIFGNRPSDFDPSLRWGYRPSDYSRASDYSRPSDYSRWGSSDDDNGLVDSPSTVLYSPMSTNGGSASNEDGYSMPGHSRYCLVASKQMVGIYLTVWVKGELKDHVRNMKVSCVGRGLMGYLGNKGSISISMSVHETSFCFICSHLTSGQKEGDELRRNSDVMEILKKTRFPRVHGVDNEKSPQTILEHDRIIWLGDLNYRIALSYRSAKALVEMQNWRALLENDQLRIEQKRGRAFVGWNEGKIYFPPTYKYSTNSDRYSGDDMHPKEKRRTPAWCDRILWYGEGLHQLSYVRGESRFSDHRPVYGIFWAEVESPHGKLKKSMSCSQSRIELEELLPYSGGYTELNFF*