Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181870 | XP_024642117.1 | 96.838 | 253 | 8 | 0 | 1 | 253 | 1 | 253 | 1.10e-178 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181870 | sp|G7ID19|RBP2_MEDTR | 96.443 | 253 | 8 | 1 | 1 | 253 | 1 | 252 | 7.87e-179 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181870 | A0A396K009 | 96.443 | 253 | 8 | 1 | 1 | 253 | 1 | 252 | 3.01e-176 | 494 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0181870 | Msa0858440 | 0.813935 | 1.989659e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181870 | MtrunA17_Chr1g0202131 | 96.443 | 253 | 8 | 1 | 1 | 253 | 1 | 252 | 5.79e-180 | 494 |
| Msa0181870 | MtrunA17_Chr6g0463441 | 69.565 | 253 | 67 | 7 | 1 | 250 | 1 | 246 | 5.51e-113 | 325 |
| Msa0181870 | MtrunA17_Chr3g0127231 | 46.565 | 262 | 97 | 14 | 1 | 253 | 1 | 228 | 1.01e-58 | 186 |
| Msa0181870 | MtrunA17_Chr3g0135941 | 43.925 | 107 | 60 | 0 | 136 | 242 | 116 | 222 | 3.95e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0181870 | AT1G21320.2 | 49.814 | 269 | 102 | 10 | 1 | 253 | 1 | 252 | 5.23e-74 | 226 |
| Msa0181870 | AT1G21320.5 | 53.394 | 221 | 84 | 7 | 40 | 253 | 1 | 209 | 1.82e-66 | 205 |
| Msa0181870 | AT1G21320.3 | 52.381 | 231 | 90 | 8 | 30 | 253 | 38 | 255 | 9.55e-66 | 205 |
| Msa0181870 | AT1G76940.1 | 49.219 | 256 | 104 | 6 | 1 | 253 | 1 | 233 | 2.75e-65 | 203 |
| Msa0181870 | AT1G21320.1 | 53.153 | 222 | 85 | 7 | 39 | 253 | 211 | 420 | 2.25e-64 | 207 |
| Msa0181870 | AT1G76940.2 | 64.925 | 134 | 35 | 3 | 129 | 253 | 49 | 179 | 5.35e-52 | 167 |
| Msa0181870 | AT1G21320.4 | 42.254 | 142 | 66 | 6 | 39 | 173 | 211 | 343 | 3.71e-21 | 91.3 |
| Msa0181870 | AT1G76940.3 | 37.500 | 176 | 87 | 6 | 1 | 173 | 1 | 156 | 8.02e-17 | 76.3 |
Find 118 sgRNAs with CRISPR-Local
Find 455 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGGTTCACCTTGGGTTTA+AGG | 0.094944 | 1_4:+70154075 | Msa0181870:three_prime_UTR |
| ACAATTCAGAAACCCTAATT+TGG | 0.155280 | 1_4:-70148415 | None:intergenic |
| CAGCTTACTTCATTTAATTC+TGG | 0.171204 | 1_4:+70152648 | Msa0181870:CDS |
| AAATTGGAGTTCTGCCTAAA+AGG | 0.229652 | 1_4:+70154327 | Msa0181870:three_prime_UTR |
| TTGCAATGGCAGATGGCTTC+TGG | 0.243201 | 1_4:+70148535 | Msa0181870:exon |
| AATGGGCGTAATGTCAATTT+TGG | 0.247122 | 1_4:+70152798 | Msa0181870:CDS |
| ACTTACATGTTTGGATTCTT+TGG | 0.259911 | 1_4:-70153119 | None:intergenic |
| CAAACATGCACTTACATGTT+TGG | 0.290047 | 1_4:-70153128 | None:intergenic |
| AAAAGACCCCGTACTGAATA+TGG | 0.294565 | 1_4:+70148600 | Msa0181870:CDS |
| TCTACAAAACAAAGGATTAA+AGG | 0.300147 | 1_4:-70153259 | None:intergenic |
| TCTGGGGAGGCTAGTGTAAT+TGG | 0.321805 | 1_4:+70152666 | Msa0181870:CDS |
| CGCCCATTTCGTGCAAGATC+AGG | 0.336064 | 1_4:-70152783 | None:intergenic |
| GCTCAAATGCAATTGTAGTT+TGG | 0.339562 | 1_4:-70154130 | None:intergenic |
| AGCTTACTTCATTTAATTCT+GGG | 0.352280 | 1_4:+70152649 | Msa0181870:CDS |
| GGCCCTGATCTTGCACGAAA+TGG | 0.352532 | 1_4:+70152780 | Msa0181870:CDS |
| GGCCGAAGAAGTGGCGGGCC+TGG | 0.361214 | 1_4:+70154033 | Msa0181870:CDS |
| GTTGGATTGGCAAGGGGTGT+TGG | 0.364461 | 1_4:+70152693 | Msa0181870:CDS |
| GTTGCAGATACGGCACCTTC+TGG | 0.372362 | 1_4:+70152411 | Msa0181870:intron |
| CACCTCTTGCCGCGAGGTCC+AGG | 0.376478 | 1_4:-70154051 | None:intergenic |
| TACCTGTAGATGCAGTTTCC+AGG | 0.381965 | 1_4:+70152829 | Msa0181870:CDS |
| AAAACTAATATAGACATTTA+CGG | 0.383750 | 1_4:+70154153 | Msa0181870:three_prime_UTR |
| AGGGGTGTTGGTGAATTTCC+AGG | 0.387492 | 1_4:+70152705 | Msa0181870:CDS |
| CATCTTAGTGGTGTTGGTGG+TGG | 0.387530 | 1_4:+70152759 | Msa0181870:CDS |
| TCAAGTACTTTATATGTTGA+AGG | 0.393632 | 1_4:+70152888 | Msa0181870:CDS |
| TTGAGCATGCCGCCCGGAGG+AGG | 0.399771 | 1_4:-70148579 | None:intergenic |
| AATATGGTAAGAATTCAAAT+TGG | 0.403993 | 1_4:+70154311 | Msa0181870:three_prime_UTR |
| GTCCAGGCCCGCCACTTCTT+CGG | 0.408070 | 1_4:-70154035 | None:intergenic |
| TCTGCCATGGGGCATCTTAG+TGG | 0.411336 | 1_4:+70152747 | Msa0181870:CDS |
| GAGGTGAGCTGGTTCACCTT+GGG | 0.414629 | 1_4:+70154068 | Msa0181870:exon |
| AATTGGAGTTCTGCCTAAAA+GGG | 0.421200 | 1_4:+70154328 | Msa0181870:three_prime_UTR |
| GCCCTGATCTTGCACGAAAT+GGG | 0.423036 | 1_4:+70152781 | Msa0181870:CDS |
| TAGTGGTATTGTCTCAGGTC+CGG | 0.435953 | 1_4:-70152853 | None:intergenic |
| ACTTCTCTATATCCGACAAA+AGG | 0.438290 | 1_4:-70153085 | None:intergenic |
| ATGGGGCATCTTAGTGGTGT+TGG | 0.442716 | 1_4:+70152753 | Msa0181870:CDS |
| TTACCGTGTTGTATAAATAG+TGG | 0.445682 | 1_4:+70154195 | Msa0181870:three_prime_UTR |
| AAACTAATATAGACATTTAC+GGG | 0.446224 | 1_4:+70154154 | Msa0181870:three_prime_UTR |
| CTAGGTGATCCTTCTGCCAT+GGG | 0.453357 | 1_4:+70152735 | Msa0181870:CDS |
| CGAGGTAGTGGTATTGTCTC+AGG | 0.454968 | 1_4:-70152858 | None:intergenic |
| GCTAGTGTAATTGGTGGTGT+TGG | 0.457358 | 1_4:+70152675 | Msa0181870:CDS |
| TATTGTCTCAGGTCCGGGCC+TGG | 0.460416 | 1_4:-70152847 | None:intergenic |
| GACCGCTTCCTTCAGAGTGC+AGG | 0.461691 | 1_4:+70152525 | Msa0181870:CDS |
| GGCACCTTCTGGTGTGACCT+CGG | 0.462187 | 1_4:+70152422 | Msa0181870:CDS |
| GCACCTTCTGGTGTGACCTC+GGG | 0.476222 | 1_4:+70152423 | Msa0181870:CDS |
| GCAGCCGCATCTCCCTCCTC+CGG | 0.476595 | 1_4:+70148566 | Msa0181870:CDS |
| GGGCATCTTAGTGGTGTTGG+TGG | 0.477192 | 1_4:+70152756 | Msa0181870:CDS |
| TCTAGGTGATCCTTCTGCCA+TGG | 0.481909 | 1_4:+70152734 | Msa0181870:CDS |
| GGCCCGCCACTTCTTCGGCC+AGG | 0.482518 | 1_4:-70154030 | None:intergenic |
| TGGTGGTGTTGGATTGGCAA+GGG | 0.483162 | 1_4:+70152686 | Msa0181870:CDS |
| AGAGGTGAGCTGGTTCACCT+TGG | 0.495722 | 1_4:+70154067 | Msa0181870:exon |
| GATGATGATGATGAAGTTGA+TGG | 0.496019 | 1_4:-70148481 | None:intergenic |
| GAATTTCCAGGCCATTCTCT+AGG | 0.503129 | 1_4:+70152717 | Msa0181870:CDS |
| GGTGGTGTTGGATTGGCAAG+GGG | 0.505156 | 1_4:+70152687 | Msa0181870:CDS |
| TGATCTCTTGCAATGGCAGA+TGG | 0.508046 | 1_4:+70148528 | Msa0181870:exon |
| CTGCTAACCATATTCAGTAC+GGG | 0.508523 | 1_4:-70148607 | None:intergenic |
| GGCCTGGACCTCGCGGCAAG+AGG | 0.510434 | 1_4:+70154049 | Msa0181870:CDS |
| AGTTTGGTCTTAGCCTGTCT+AGG | 0.512860 | 1_4:-70154114 | None:intergenic |
| CAAGTACTTTATATGTTGAA+GGG | 0.514629 | 1_4:+70152889 | Msa0181870:CDS |
| TTGGTGGTGTTGGATTGGCA+AGG | 0.517002 | 1_4:+70152685 | Msa0181870:CDS |
| AATTGTAATGGTGTAGAAGA+TGG | 0.517025 | 1_4:-70148447 | None:intergenic |
| CCTCGCGGCAAGAGGTGAGC+TGG | 0.520182 | 1_4:+70154057 | Msa0181870:exon |
| AGTGGTATTGTCTCAGGTCC+GGG | 0.520528 | 1_4:-70152852 | None:intergenic |
| TGTAATTGGTGGTGTTGGAT+TGG | 0.524220 | 1_4:+70152680 | Msa0181870:CDS |
| GGCCTGGAAACTGCATCTAC+AGG | 0.525078 | 1_4:-70152831 | None:intergenic |
| CTTGAAGCATCTCGAGGTAG+TGG | 0.525252 | 1_4:-70152870 | None:intergenic |
| TATACAACACGGTAATCAAT+CGG | 0.526867 | 1_4:-70154187 | None:intergenic |
| CAGGAGACCGCGAAAACTGA+AGG | 0.529170 | 1_4:-70154011 | None:intergenic |
| CGGTCTCCTGGCCGAAGAAG+TGG | 0.530778 | 1_4:+70154024 | Msa0181870:CDS |
| CTAAACGACACTAAAACACT+CGG | 0.534798 | 1_4:+70152492 | Msa0181870:CDS |
| GGGATGGTGGTGAATTGTAA+TGG | 0.538195 | 1_4:-70148459 | None:intergenic |
| GCTGCTAACCATATTCAGTA+CGG | 0.542356 | 1_4:-70148608 | None:intergenic |
| AAGGCAGTTGCTGCACAAGC+CGG | 0.544435 | 1_4:-70153292 | None:intergenic |
| CAGCCGCATCTCCCTCCTCC+GGG | 0.544872 | 1_4:+70148567 | Msa0181870:CDS |
| TGAGCATGCCGCCCGGAGGA+GGG | 0.546136 | 1_4:-70148578 | None:intergenic |
| GCCCATTTCGTGCAAGATCA+GGG | 0.546234 | 1_4:-70152782 | None:intergenic |
| CAGAAGGATCACCTAGAGAA+TGG | 0.547740 | 1_4:-70152728 | None:intergenic |
| ACCGCTTCCTTCAGAGTGCA+GGG | 0.548107 | 1_4:+70152526 | Msa0181870:CDS |
| GGGGAGGCTAGTGTAATTGG+TGG | 0.550012 | 1_4:+70152669 | Msa0181870:CDS |
| ATGATGATGATGAAGTTGAT+GGG | 0.552624 | 1_4:-70148480 | None:intergenic |
| GATACCTTGCAAGGCGCTCA+AGG | 0.554534 | 1_4:-70153311 | None:intergenic |
| TATGCGCTCATAGCCTAGAC+AGG | 0.557682 | 1_4:+70154101 | Msa0181870:three_prime_UTR |
| TACTTCATTTAATTCTGGGG+AGG | 0.558022 | 1_4:+70152653 | Msa0181870:CDS |
| TCTCCTGGCCGAAGAAGTGG+CGG | 0.559639 | 1_4:+70154027 | Msa0181870:CDS |
| GGATCACCTAGAGAATGGCC+TGG | 0.562504 | 1_4:-70152723 | None:intergenic |
| CCGCCCGGAGGAGGGAGATG+CGG | 0.566744 | 1_4:-70148570 | None:intergenic |
| GTAGATGCAGTTTCCAGGCC+CGG | 0.567675 | 1_4:+70152834 | Msa0181870:CDS |
| CTTCTCTATATCCGACAAAA+GGG | 0.574261 | 1_4:-70153084 | None:intergenic |
| ACTGCCTTGAGCGCCTTGCA+AGG | 0.578510 | 1_4:+70153307 | Msa0181870:CDS |
| AATTATATTGCTCAAAACAA+TGG | 0.582968 | 1_4:+70152459 | Msa0181870:CDS |
| GATGAAGTTGATGGGGATGG+TGG | 0.584043 | 1_4:-70148472 | None:intergenic |
| ATTCTATTGATCTCTTGCAA+TGG | 0.584870 | 1_4:+70148521 | Msa0181870:exon |
| ATATTACCCCTGCACTCTGA+AGG | 0.585517 | 1_4:-70152533 | None:intergenic |
| CTAAGATGCCCCATGGCAGA+AGG | 0.593428 | 1_4:-70152744 | None:intergenic |
| TTGCAAAATCTACAAAACAA+AGG | 0.594306 | 1_4:-70153267 | None:intergenic |
| TGGTGTGACCTCGGGCAATG+AGG | 0.595969 | 1_4:+70152431 | Msa0181870:CDS |
| TTGCCCGAGGTCACACCAGA+AGG | 0.598787 | 1_4:-70152426 | None:intergenic |
| CGCATACAACCTTAAACCCA+AGG | 0.602743 | 1_4:-70154084 | None:intergenic |
| GCTTACTTCATTTAATTCTG+GGG | 0.602966 | 1_4:+70152650 | Msa0181870:CDS |
| CTCCTGGCCGAAGAAGTGGC+GGG | 0.607327 | 1_4:+70154028 | Msa0181870:CDS |
| AGGCGCAAGTAGCTTGACTC+AGG | 0.611487 | 1_4:-70153991 | None:intergenic |
| AAAAGAAGTGATACCTTGCA+AGG | 0.614697 | 1_4:-70153320 | None:intergenic |
| TAATATAGACATTTACGGGA+TGG | 0.614747 | 1_4:+70154158 | Msa0181870:three_prime_UTR |
| ACTTGTTTATTGCAGCGAGG+TGG | 0.632918 | 1_4:+70153232 | Msa0181870:intron |
| GAGATCAATAGAATGAGCAG+AGG | 0.642266 | 1_4:-70148512 | None:intergenic |
| TGATGATGATGAAGTTGATG+GGG | 0.642272 | 1_4:-70148479 | None:intergenic |
| CCCCTGCACTCTGAAGGAAG+CGG | 0.661189 | 1_4:-70152527 | None:intergenic |
| AGTGGCGGGCCTGGACCTCG+CGG | 0.663729 | 1_4:+70154042 | Msa0181870:CDS |
| TAAACGACACTAAAACACTC+GGG | 0.665910 | 1_4:+70152493 | Msa0181870:CDS |
| CCAGCTCACCTCTTGCCGCG+AGG | 0.667406 | 1_4:-70154057 | None:intergenic |
| AACACCACTAAGATGCCCCA+TGG | 0.672556 | 1_4:-70152751 | None:intergenic |
| TAGGTGATCCTTCTGCCATG+GGG | 0.675793 | 1_4:+70152736 | Msa0181870:CDS |
| GATGATGAAGTTGATGGGGA+TGG | 0.675863 | 1_4:-70148475 | None:intergenic |
| ATATAGAGAAGTAAGACTTG+TGG | 0.681838 | 1_4:+70153096 | Msa0181870:CDS |
| AAAGTACTTGAAGCATCTCG+AGG | 0.682579 | 1_4:-70152876 | None:intergenic |
| CCGCTTCCTTCAGAGTGCAG+GGG | 0.693385 | 1_4:+70152527 | Msa0181870:CDS |
| TGCTAACCATATTCAGTACG+GGG | 0.695009 | 1_4:-70148606 | None:intergenic |
| CCGCATCTCCCTCCTCCGGG+CGG | 0.699708 | 1_4:+70148570 | Msa0181870:CDS |
| ATTATGCACCTCATTGCCCG+AGG | 0.705713 | 1_4:-70152439 | None:intergenic |
| TTACCACTATTTATACAACA+CGG | 0.728000 | 1_4:-70154198 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTTTTAAATTA+TGG | + | chr1_4:70150767-70150786 | Msa0181870:intron | 0.0% |
| !! | AAAAATAAATTACAGAAAAT+GGG | - | chr1_4:70148640-70148659 | None:intergenic | 10.0% |
| !!! | TCGTATAAATTTTATTAAAA+AGG | - | chr1_4:70149178-70149197 | None:intergenic | 10.0% |
| !! | TTAAATTAAATTCAAATAGT+TGG | - | chr1_4:70150096-70150115 | None:intergenic | 10.0% |
| !!! | TTTTATAGTTTTCAATAATA+TGG | + | chr1_4:70154295-70154314 | Msa0181870:three_prime_UTR | 10.0% |
| !!! | TTTTATCATTTTCCAAATTA+GGG | + | chr1_4:70148241-70148260 | Msa0181870:intron | 15.0% |
| !!! | TTTTATCATTTTCCAAATTA+GGG | + | chr1_4:70148241-70148260 | Msa0181870:intron | 15.0% |
| !! | GAAAAATAAATTACAGAAAA+TGG | - | chr1_4:70148641-70148660 | None:intergenic | 15.0% |
| !! | TTTGTAATTTATTAGATTGT+GGG | + | chr1_4:70148704-70148723 | Msa0181870:intron | 15.0% |
| !! | TTATAAGCAAAAAAAAATGA+AGG | - | chr1_4:70149235-70149254 | None:intergenic | 15.0% |
| !!! | TTTTTTGCTTATAAGTATTT+TGG | + | chr1_4:70149241-70149260 | Msa0181870:intron | 15.0% |
| !!! | TTTTTGCTTATAAGTATTTT+GGG | + | chr1_4:70149242-70149261 | Msa0181870:intron | 15.0% |
| !!! | ATTAAAATGTTTCTAAACTT+TGG | - | chr1_4:70149466-70149485 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAACAGAAGT+AGG | + | chr1_4:70150132-70150151 | Msa0181870:intron | 15.0% |
| !! | TTTATATGAATTCATTTATG+TGG | + | chr1_4:70150174-70150193 | Msa0181870:intron | 15.0% |
| !! | CATTAGATGTAAAATAAAAT+GGG | - | chr1_4:70152564-70152583 | None:intergenic | 15.0% |
| !! | ACATTAGATGTAAAATAAAA+TGG | - | chr1_4:70152565-70152584 | None:intergenic | 15.0% |
| !! | TATATTAACTATCAATATCA+TGG | + | chr1_4:70153756-70153775 | Msa0181870:intron | 15.0% |
| !! | AAAACTAATATAGACATTTA+CGG | + | chr1_4:70154153-70154172 | Msa0181870:three_prime_UTR | 15.0% |
| !!! | GTTTTATCATTTTCCAAATT+AGG | + | chr1_4:70148240-70148259 | Msa0181870:intron | 20.0% |
| !!! | GTTTTATCATTTTCCAAATT+AGG | + | chr1_4:70148240-70148259 | Msa0181870:intron | 20.0% |
| !!! | AACTTGAAAGATTGAATTTT+TGG | - | chr1_4:70148663-70148682 | None:intergenic | 20.0% |
| !!! | AATTCAATCTTTCAAGTTAT+TGG | + | chr1_4:70148665-70148684 | Msa0181870:intron | 20.0% |
| !!! | TTTCAAGTTATTGGTATTTA+GGG | + | chr1_4:70148674-70148693 | Msa0181870:intron | 20.0% |
| !! | CTTTGTAATTTATTAGATTG+TGG | + | chr1_4:70148703-70148722 | Msa0181870:intron | 20.0% |
| !! | AGTAAAAAATAAATGCAATC+TGG | - | chr1_4:70149076-70149095 | None:intergenic | 20.0% |
| !! | CTGAAACACAATAAATAAAA+TGG | + | chr1_4:70149199-70149218 | Msa0181870:intron | 20.0% |
| !!! | ATAATTGCTTTTGTTTTATC+TGG | + | chr1_4:70149322-70149341 | Msa0181870:intron | 20.0% |
| !!! | AGAGATGCTATTTAATATTT+TGG | + | chr1_4:70149514-70149533 | Msa0181870:intron | 20.0% |
| !! | AATCTTAGAATTTAGACAAA+AGG | - | chr1_4:70149685-70149704 | None:intergenic | 20.0% |
| !! | TTAATATTTACTCATTTGAC+CGG | - | chr1_4:70149789-70149808 | None:intergenic | 20.0% |
| !!! | GCAACTTTATTTTTTTTGAA+CGG | - | chr1_4:70149837-70149856 | None:intergenic | 20.0% |
| !! | TTCAAAAAAAATAAAGTTGC+TGG | + | chr1_4:70149837-70149856 | Msa0181870:intron | 20.0% |
| !! | TCAAAAAAAATAAAGTTGCT+GGG | + | chr1_4:70149838-70149857 | Msa0181870:intron | 20.0% |
| !!! | TTGTAAAATACTTCTAGAAA+AGG | - | chr1_4:70150027-70150046 | None:intergenic | 20.0% |
| !! | ACTGTATCTATAAAAAATCA+GGG | - | chr1_4:70150324-70150343 | None:intergenic | 20.0% |
| !! | AACTGTATCTATAAAAAATC+AGG | - | chr1_4:70150325-70150344 | None:intergenic | 20.0% |
| !! | TATTTAGATGTATACTATTG+CGG | + | chr1_4:70150576-70150595 | Msa0181870:intron | 20.0% |
| !! | AACTAAAAGAAGATTATGAT+TGG | + | chr1_4:70150823-70150842 | Msa0181870:intron | 20.0% |
| !! | TTGTTCATAAAAATTAGCTA+TGG | - | chr1_4:70151126-70151145 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr1_4:70151485-70151504 | None:intergenic | 20.0% |
| !! | ACATAATTCAGTGTAATTAT+AGG | + | chr1_4:70151504-70151523 | Msa0181870:intron | 20.0% |
| !! | ATTTAAACATGGTATCAAAA+GGG | - | chr1_4:70151855-70151874 | None:intergenic | 20.0% |
| !! | AATTTAAACATGGTATCAAA+AGG | - | chr1_4:70151856-70151875 | None:intergenic | 20.0% |
| !! | TTGATACCATGTTTAAATTA+TGG | + | chr1_4:70151857-70151876 | Msa0181870:intron | 20.0% |
| !! | TGATACCATGTTTAAATTAT+GGG | + | chr1_4:70151858-70151877 | Msa0181870:intron | 20.0% |
| !! | AAAGATGAGATTAAGATTAA+AGG | + | chr1_4:70151892-70151911 | Msa0181870:intron | 20.0% |
| !! | ACCTAATCTTAATTGAATAT+GGG | + | chr1_4:70151992-70152011 | Msa0181870:intron | 20.0% |
| !!! | GAAAAGTATCTTATAATATC+AGG | - | chr1_4:70152116-70152135 | None:intergenic | 20.0% |
| !! | AAAATGCATTTAAAAAGGTT+TGG | - | chr1_4:70152339-70152358 | None:intergenic | 20.0% |
| !! | TCTGAAAAATGCATTTAAAA+AGG | - | chr1_4:70152344-70152363 | None:intergenic | 20.0% |
| !! | AATTATATTGCTCAAAACAA+TGG | + | chr1_4:70152459-70152478 | Msa0181870:CDS | 20.0% |
| !! | AATATCTAAATATGACGTTA+AGG | - | chr1_4:70153059-70153078 | None:intergenic | 20.0% |
| !! | ATTATGCATTCATTTCTTTA+CGG | + | chr1_4:70153936-70153955 | Msa0181870:intron | 20.0% |
| !! | AAACTAATATAGACATTTAC+GGG | + | chr1_4:70154154-70154173 | Msa0181870:three_prime_UTR | 20.0% |
| !! | AATATGGTAAGAATTCAAAT+TGG | + | chr1_4:70154311-70154330 | Msa0181870:three_prime_UTR | 20.0% |
| ! | AAGAAGAAGAAGAAGAATTA+GGG | + | chr1_4:70148218-70148237 | Msa0181870:intron | 25.0% |
| ! | AAGAAGAAGAAGAAGAATTA+GGG | + | chr1_4:70148218-70148237 | Msa0181870:intron | 25.0% |
| !!! | CTTTCAAGTTATTGGTATTT+AGG | + | chr1_4:70148673-70148692 | Msa0181870:intron | 25.0% |
| ! | AGCAACAAAAAAACATAAAC+GGG | - | chr1_4:70149274-70149293 | None:intergenic | 25.0% |
| ! | CAGCAACAAAAAAACATAAA+CGG | - | chr1_4:70149275-70149294 | None:intergenic | 25.0% |
| !!! | ATTTTCTTTGAAAAAGCAAG+AGG | - | chr1_4:70149402-70149421 | None:intergenic | 25.0% |
| ! | TAATATTTACTCATTTGACC+GGG | - | chr1_4:70149788-70149807 | None:intergenic | 25.0% |
| !! | ATGTTCTTTCTAAAAACCAA+GGG | - | chr1_4:70150073-70150092 | None:intergenic | 25.0% |
| !! | CTGGATTTATCAATCAATTT+TGG | + | chr1_4:70150433-70150452 | Msa0181870:intron | 25.0% |
| ! | CATTATCTTGAATTATGTCA+TGG | - | chr1_4:70150988-70151007 | None:intergenic | 25.0% |
| !! | TTATATTTGAAGCAAGCTTA+AGG | - | chr1_4:70151076-70151095 | None:intergenic | 25.0% |
| ! | CTTGCTTCAAATATAATTTG+TGG | + | chr1_4:70151080-70151099 | Msa0181870:intron | 25.0% |
| ! | AACCAAATTCAAACTTTACT+AGG | + | chr1_4:70151224-70151243 | Msa0181870:intron | 25.0% |
| ! | GATACCATGTTTAAATTATG+GGG | + | chr1_4:70151859-70151878 | Msa0181870:intron | 25.0% |
| ! | AAAACCCCATAATTTAAACA+TGG | - | chr1_4:70151866-70151885 | None:intergenic | 25.0% |
| ! | AAGCATAACCTGTATTTATA+CGG | + | chr1_4:70151960-70151979 | Msa0181870:intron | 25.0% |
| ! | CACCTAATCTTAATTGAATA+TGG | + | chr1_4:70151991-70152010 | Msa0181870:intron | 25.0% |
| ! | TCCCATATTCAATTAAGATT+AGG | - | chr1_4:70151996-70152015 | None:intergenic | 25.0% |
| ! | TTCTATCGTAGTTATTATCA+CGG | - | chr1_4:70152024-70152043 | None:intergenic | 25.0% |
| !!! | ATTTCCTTGTTTCCAATTTT+CGG | - | chr1_4:70152219-70152238 | None:intergenic | 25.0% |
| !! | TTATATTATAGTGTTGGGTT+GGG | - | chr1_4:70152276-70152295 | None:intergenic | 25.0% |
| ! | CGATCTTATATTATAGTGTT+GGG | - | chr1_4:70152281-70152300 | None:intergenic | 25.0% |
| ! | ACGATCTTATATTATAGTGT+TGG | - | chr1_4:70152282-70152301 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTTGCTAAAGATG+TGG | + | chr1_4:70152363-70152382 | Msa0181870:intron | 25.0% |
| ! | ATTATGTAATGTTGCAGATA+CGG | + | chr1_4:70152401-70152420 | Msa0181870:intron | 25.0% |
| ! | AGCTTACTTCATTTAATTCT+GGG | + | chr1_4:70152649-70152668 | Msa0181870:CDS | 25.0% |
| ! | TCAAGTACTTTATATGTTGA+AGG | + | chr1_4:70152888-70152907 | Msa0181870:CDS | 25.0% |
| ! | CAAGTACTTTATATGTTGAA+GGG | + | chr1_4:70152889-70152908 | Msa0181870:CDS | 25.0% |
| ! | TCTACAAAACAAAGGATTAA+AGG | - | chr1_4:70153262-70153281 | None:intergenic | 25.0% |
| ! | TTGCAAAATCTACAAAACAA+AGG | - | chr1_4:70153270-70153289 | None:intergenic | 25.0% |
| !! | TTTTGTAGATTTTGCAAATC+CGG | + | chr1_4:70153273-70153292 | Msa0181870:CDS | 25.0% |
| !! | TTTTTACACGCTGATATAAA+AGG | + | chr1_4:70153339-70153358 | Msa0181870:intron | 25.0% |
| !! | AGGAAATTGATTTCATGTTA+TGG | + | chr1_4:70153359-70153378 | Msa0181870:intron | 25.0% |
| !! | GGAAATTGATTTCATGTTAT+GGG | + | chr1_4:70153360-70153379 | Msa0181870:intron | 25.0% |
| ! | TGAAAGTGAAAACTGAAAAT+GGG | + | chr1_4:70153659-70153678 | Msa0181870:intron | 25.0% |
| ! | TACAAAATTCTGCAAGTTAT+TGG | + | chr1_4:70153843-70153862 | Msa0181870:intron | 25.0% |
| ! | TTATGCATTCATTTCTTTAC+GGG | + | chr1_4:70153937-70153956 | Msa0181870:intron | 25.0% |
| ! | TTACCACTATTTATACAACA+CGG | - | chr1_4:70154201-70154220 | None:intergenic | 25.0% |
| GAAGAAGAAGAAGAAGAATT+AGG | + | chr1_4:70148217-70148236 | Msa0181870:intron | 30.0% | |
| ACAATTCAGAAACCCTAATT+TGG | - | chr1_4:70148256-70148275 | None:intergenic | 30.0% | |
| AATTGTAATGGTGTAGAAGA+TGG | - | chr1_4:70148288-70148307 | None:intergenic | 30.0% | |
| ! | ATGATGATGATGAAGTTGAT+GGG | - | chr1_4:70148321-70148340 | None:intergenic | 30.0% |
| GAAGAAGAAGAAGAAGAATT+AGG | + | chr1_4:70148217-70148236 | Msa0181870:intron | 30.0% | |
| ACAATTCAGAAACCCTAATT+TGG | - | chr1_4:70148256-70148275 | None:intergenic | 30.0% | |
| AATTGTAATGGTGTAGAAGA+TGG | - | chr1_4:70148288-70148307 | None:intergenic | 30.0% | |
| ! | ATGATGATGATGAAGTTGAT+GGG | - | chr1_4:70148321-70148340 | None:intergenic | 30.0% |
| ATTCTATTGATCTCTTGCAA+TGG | + | chr1_4:70148521-70148540 | Msa0181870:exon | 30.0% | |
| ! | AGTTATTGGTATTTAGGGTT+AGG | + | chr1_4:70148679-70148698 | Msa0181870:intron | 30.0% |
| ACGAAACTATTCAAAACCAA+TGG | - | chr1_4:70148871-70148890 | None:intergenic | 30.0% | |
| TTGAATAGTTTCGTTGTTTG+TGG | + | chr1_4:70148877-70148896 | Msa0181870:intron | 30.0% | |
| TTGTAAATCTTAGCATGGAT+GGG | - | chr1_4:70148925-70148944 | None:intergenic | 30.0% | |
| TGATGTTGTAAATCTTAGCA+TGG | - | chr1_4:70148930-70148949 | None:intergenic | 30.0% | |
| GTTTACATCACCCATTTATA+TGG | + | chr1_4:70149647-70149666 | Msa0181870:intron | 30.0% | |
| TAACTCAAGGCCATATAAAT+GGG | - | chr1_4:70149660-70149679 | None:intergenic | 30.0% | |
| ! | ATCAAAGCCTTATCTTAGAT+CGG | + | chr1_4:70149707-70149726 | Msa0181870:intron | 30.0% |
| ! | TGTTCTTTCTAAAAACCAAG+GGG | - | chr1_4:70150072-70150091 | None:intergenic | 30.0% |
| ! | GATGTTCTTTCTAAAAACCA+AGG | - | chr1_4:70150074-70150093 | None:intergenic | 30.0% |
| !! | ATCTTAGTTTTTCTAACACG+TGG | + | chr1_4:70150551-70150570 | Msa0181870:intron | 30.0% |
| !!! | ATGGAGTTTTAGATAAAGAG+AGG | + | chr1_4:70150786-70150805 | Msa0181870:intron | 30.0% |
| AGCCTAGTAAAGTTTGAATT+TGG | - | chr1_4:70151229-70151248 | None:intergenic | 30.0% | |
| !!! | TAGCTGCTACTTTTTCATTT+GGG | - | chr1_4:70151309-70151328 | None:intergenic | 30.0% |
| !!! | ATAGCTGCTACTTTTTCATT+TGG | - | chr1_4:70151310-70151329 | None:intergenic | 30.0% |
| TTCAGTGTAATTATAGGTGT+CGG | + | chr1_4:70151510-70151529 | Msa0181870:intron | 30.0% | |
| GATGAGATTAAGATTAAAGG+TGG | + | chr1_4:70151895-70151914 | Msa0181870:intron | 30.0% | |
| !! | TTTCCTTGTTTCCAATTTTC+GGG | - | chr1_4:70152218-70152237 | None:intergenic | 30.0% |
| ! | TATATTATAGTGTTGGGTTG+GGG | - | chr1_4:70152275-70152294 | None:intergenic | 30.0% |
| ! | CTTATATTATAGTGTTGGGT+TGG | - | chr1_4:70152277-70152296 | None:intergenic | 30.0% |
| ATCTGCAACATTACATAATC+TGG | - | chr1_4:70152400-70152419 | None:intergenic | 30.0% | |
| !!! | TTTTAGTGTCGTTTAGCATT+TGG | - | chr1_4:70152488-70152507 | None:intergenic | 30.0% |
| CAGCTTACTTCATTTAATTC+TGG | + | chr1_4:70152648-70152667 | Msa0181870:CDS | 30.0% | |
| GCTTACTTCATTTAATTCTG+GGG | + | chr1_4:70152650-70152669 | Msa0181870:CDS | 30.0% | |
| CGTTAAGGAACTTGAATAAT+TGG | - | chr1_4:70153044-70153063 | None:intergenic | 30.0% | |
| ATATAGAGAAGTAAGACTTG+TGG | + | chr1_4:70153096-70153115 | Msa0181870:CDS | 30.0% | |
| ACTTACATGTTTGGATTCTT+TGG | - | chr1_4:70153122-70153141 | None:intergenic | 30.0% | |
| ATGTAAGTGCATGTTTGTAA+CGG | + | chr1_4:70153134-70153153 | Msa0181870:intron | 30.0% | |
| ! | CAATTTTTACATGCTCTATC+AGG | - | chr1_4:70153428-70153447 | None:intergenic | 30.0% |
| AAAAATTGAAAACTGCCCTT+AGG | + | chr1_4:70153440-70153459 | Msa0181870:intron | 30.0% | |
| ATCAAGATGTGGTTATTAAG+TGG | + | chr1_4:70153475-70153494 | Msa0181870:intron | 30.0% | |
| ATTTACTGAGCTTTACAACT+TGG | + | chr1_4:70153537-70153556 | Msa0181870:intron | 30.0% | |
| AACCAATACTTTACAGTTAC+TGG | + | chr1_4:70153623-70153642 | Msa0181870:intron | 30.0% | |
| CTGAAAGTGAAAACTGAAAA+TGG | + | chr1_4:70153658-70153677 | Msa0181870:intron | 30.0% | |
| GAATATTACAAACAGAACCA+AGG | - | chr1_4:70153694-70153713 | None:intergenic | 30.0% | |
| GGTTCTGTTTGTAATATTCT+AGG | + | chr1_4:70153695-70153714 | Msa0181870:intron | 30.0% | |
| ! | TTTTGTAGTACAGAATACAG+AGG | - | chr1_4:70153830-70153849 | None:intergenic | 30.0% |
| AGTCGCTGATAAACTTTATT+AGG | + | chr1_4:70153881-70153900 | Msa0181870:intron | 30.0% | |
| TAATATAGACATTTACGGGA+TGG | + | chr1_4:70154158-70154177 | Msa0181870:three_prime_UTR | 30.0% | |
| TATACAACACGGTAATCAAT+CGG | - | chr1_4:70154190-70154209 | None:intergenic | 30.0% | |
| TTACCGTGTTGTATAAATAG+TGG | + | chr1_4:70154195-70154214 | Msa0181870:three_prime_UTR | 30.0% | |
| !! | TGATGATGATGAAGTTGATG+GGG | - | chr1_4:70148320-70148339 | None:intergenic | 35.0% |
| ! | GATGATGATGATGAAGTTGA+TGG | - | chr1_4:70148322-70148341 | None:intergenic | 35.0% |
| !! | TGATGATGATGAAGTTGATG+GGG | - | chr1_4:70148320-70148339 | None:intergenic | 35.0% |
| ! | GATGATGATGATGAAGTTGA+TGG | - | chr1_4:70148322-70148341 | None:intergenic | 35.0% |
| TATTCAAAACCAATGGCAAG+TGG | - | chr1_4:70148864-70148883 | None:intergenic | 35.0% | |
| GTTGTAAATCTTAGCATGGA+TGG | - | chr1_4:70148926-70148945 | None:intergenic | 35.0% | |
| ! | CTTTTCTCATCAGGTAAGAT+TGG | - | chr1_4:70148967-70148986 | None:intergenic | 35.0% |
| ! | AACAAAAGGCTTTTCTCATC+AGG | - | chr1_4:70148976-70148995 | None:intergenic | 35.0% |
| ACAGCGATAACAACAACAAA+AGG | - | chr1_4:70148990-70149009 | None:intergenic | 35.0% | |
| !! | CTGGAAGTCTTGTGATATTT+TGG | + | chr1_4:70149341-70149360 | Msa0181870:intron | 35.0% |
| TTTGAAAAAGCAAGAGGACT+TGG | - | chr1_4:70149396-70149415 | None:intergenic | 35.0% | |
| CTAACTCAAGGCCATATAAA+TGG | - | chr1_4:70149661-70149680 | None:intergenic | 35.0% | |
| ! | CATTTATATGGCCTTGAGTT+AGG | + | chr1_4:70149659-70149678 | Msa0181870:intron | 35.0% |
| ! | TCAAAGCCTTATCTTAGATC+GGG | + | chr1_4:70149708-70149727 | Msa0181870:intron | 35.0% |
| ! | TTTTGAACGGCAAATGTTAG+CGG | - | chr1_4:70149824-70149843 | None:intergenic | 35.0% |
| AGATTAACAACAGATTGCAG+GGG | - | chr1_4:70149925-70149944 | None:intergenic | 35.0% | |
| CAGATTAACAACAGATTGCA+GGG | - | chr1_4:70149926-70149945 | None:intergenic | 35.0% | |
| CACAATACCTTTACTATGCT+GGG | + | chr1_4:70149961-70149980 | Msa0181870:intron | 35.0% | |
| AACAAATCAAGCATTCCGAA+TGG | - | chr1_4:70150213-70150232 | None:intergenic | 35.0% | |
| !! | TTGTTTGTTGTTAGAGTGCT+TGG | + | chr1_4:70150502-70150521 | Msa0181870:intron | 35.0% |
| ! | ACTATTGCGGTTGTTGATTA+AGG | + | chr1_4:70150589-70150608 | Msa0181870:intron | 35.0% |
| ! | CTATTGCGGTTGTTGATTAA+GGG | + | chr1_4:70150590-70150609 | Msa0181870:intron | 35.0% |
| ! | TTGTTGATTAAGGGTCTCTT+TGG | + | chr1_4:70150599-70150618 | Msa0181870:intron | 35.0% |
| TTGTGAACGAAACAAAGAGA+TGG | - | chr1_4:70150648-70150667 | None:intergenic | 35.0% | |
| ! | ATCTCTTTGTTTCGTTCACA+AGG | + | chr1_4:70150647-70150666 | Msa0181870:intron | 35.0% |
| ! | TCTCTTTGTTTCGTTCACAA+GGG | + | chr1_4:70150648-70150667 | Msa0181870:intron | 35.0% |
| ! | TATTTGAAGCAAGCTTAAGG+TGG | - | chr1_4:70151073-70151092 | None:intergenic | 35.0% |
| AAACCGAACTACAACAACAT+CGG | + | chr1_4:70151151-70151170 | Msa0181870:intron | 35.0% | |
| CAACTGAAGCCTTAATTGAA+AGG | + | chr1_4:70151188-70151207 | Msa0181870:intron | 35.0% | |
| GTTGTGACACCTTTCAATTA+AGG | - | chr1_4:70151200-70151219 | None:intergenic | 35.0% | |
| GCAGCTATAGCATGTAATAA+TGG | + | chr1_4:70151322-70151341 | Msa0181870:intron | 35.0% | |
| GCTATAGCATGTAATAATGG+TGG | + | chr1_4:70151325-70151344 | Msa0181870:intron | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | - | chr1_4:70151479-70151498 | None:intergenic | 35.0% | |
| TTCATAGCACATGTCAAACA+AGG | + | chr1_4:70151591-70151610 | Msa0181870:intron | 35.0% | |
| TCATAGCACATGTCAAACAA+GGG | + | chr1_4:70151592-70151611 | Msa0181870:intron | 35.0% | |
| ! | AGAACTGGGCTCAAAATTTT+GGG | + | chr1_4:70151738-70151757 | Msa0181870:intron | 35.0% |
| TCTTGTGTCCGTATAAATAC+AGG | - | chr1_4:70151971-70151990 | None:intergenic | 35.0% | |
| TGGTGAGTCAAAATTGAGTA+TGG | + | chr1_4:70152165-70152184 | Msa0181870:intron | 35.0% | |
| !! | TTCCTTGTTTCCAATTTTCG+GGG | - | chr1_4:70152217-70152236 | None:intergenic | 35.0% |
| CTAAACGACACTAAAACACT+CGG | + | chr1_4:70152492-70152511 | Msa0181870:CDS | 35.0% | |
| TAAACGACACTAAAACACTC+GGG | + | chr1_4:70152493-70152512 | Msa0181870:CDS | 35.0% | |
| ! | TACTTCATTTAATTCTGGGG+AGG | + | chr1_4:70152653-70152672 | Msa0181870:CDS | 35.0% |
| ! | AATGGGCGTAATGTCAATTT+TGG | + | chr1_4:70152798-70152817 | Msa0181870:CDS | 35.0% |
| GATTAAAATGAATGAAGCCC+AGG | - | chr1_4:70153022-70153041 | None:intergenic | 35.0% | |
| ! | GATATTTTTCGCCCTTTTGT+CGG | + | chr1_4:70153073-70153092 | Msa0181870:intron | 35.0% |
| CTTCTCTATATCCGACAAAA+GGG | - | chr1_4:70153087-70153106 | None:intergenic | 35.0% | |
| ACTTCTCTATATCCGACAAA+AGG | - | chr1_4:70153088-70153107 | None:intergenic | 35.0% | |
| CAAACATGCACTTACATGTT+TGG | - | chr1_4:70153131-70153150 | None:intergenic | 35.0% | |
| GTGATAAACCAAGACAAAAG+AGG | - | chr1_4:70153171-70153190 | None:intergenic | 35.0% | |
| AACGGAACTTTAAACCAATC+AGG | - | chr1_4:70153193-70153212 | None:intergenic | 35.0% | |
| ! | TTTCAGCATAAAGAGCACAA+CGG | - | chr1_4:70153211-70153230 | None:intergenic | 35.0% |
| AAAAGAAGTGATACCTTGCA+AGG | - | chr1_4:70153323-70153342 | None:intergenic | 35.0% | |
| GATTTAGACCAACTACCTAA+GGG | - | chr1_4:70153458-70153477 | None:intergenic | 35.0% | |
| TGATTTAGACCAACTACCTA+AGG | - | chr1_4:70153459-70153478 | None:intergenic | 35.0% | |
| ! | AGTTGGTCTAAATCAAGATG+TGG | + | chr1_4:70153464-70153483 | Msa0181870:intron | 35.0% |
| CTCCAGTAACTGTAAAGTAT+TGG | - | chr1_4:70153628-70153647 | None:intergenic | 35.0% | |
| ATCAGCGACTAAGATACTTT+AGG | - | chr1_4:70153871-70153890 | None:intergenic | 35.0% | |
| GCTCAAATGCAATTGTAGTT+TGG | - | chr1_4:70154133-70154152 | None:intergenic | 35.0% | |
| AAATTGGAGTTCTGCCTAAA+AGG | + | chr1_4:70154327-70154346 | Msa0181870:three_prime_UTR | 35.0% | |
| AATTGGAGTTCTGCCTAAAA+GGG | + | chr1_4:70154328-70154347 | Msa0181870:three_prime_UTR | 35.0% | |
| GAGATCAATAGAATGAGCAG+AGG | - | chr1_4:70148515-70148534 | None:intergenic | 40.0% | |
| AAAAGACCCCGTACTGAATA+TGG | + | chr1_4:70148600-70148619 | Msa0181870:CDS | 40.0% | |
| TGCTAACCATATTCAGTACG+GGG | - | chr1_4:70148609-70148628 | None:intergenic | 40.0% | |
| CTGCTAACCATATTCAGTAC+GGG | - | chr1_4:70148610-70148629 | None:intergenic | 40.0% | |
| GCTGCTAACCATATTCAGTA+CGG | - | chr1_4:70148611-70148630 | None:intergenic | 40.0% | |
| !! | ATCGATGTTTTTGAACTGCG+TGG | + | chr1_4:70148764-70148783 | Msa0181870:intron | 40.0% |
| !! | TTTTTGAACTGCGTGGATTG+CGG | + | chr1_4:70148771-70148790 | Msa0181870:intron | 40.0% |
| ! | GCTATGCTATACTGATTGCA+AGG | + | chr1_4:70148818-70148837 | Msa0181870:intron | 40.0% |
| GTTACTATACCACTTGCCAT+TGG | + | chr1_4:70148852-70148871 | Msa0181870:intron | 40.0% | |
| GTCTGTTATGGTATTGCTAC+TGG | + | chr1_4:70149121-70149140 | Msa0181870:intron | 40.0% | |
| AATTCAATTACAGACCGCAG+AGG | - | chr1_4:70149567-70149586 | None:intergenic | 40.0% | |
| GTACAAGTCTTTAGCATGCT+TGG | + | chr1_4:70149612-70149631 | Msa0181870:intron | 40.0% | |
| TCTTTAGCATGCTTGGTAGA+GGG | + | chr1_4:70149619-70149638 | Msa0181870:intron | 40.0% | |
| TAGACAAAAGGCCTAACTCA+AGG | - | chr1_4:70149673-70149692 | None:intergenic | 40.0% | |
| ! | CAAAGCCTTATCTTAGATCG+GGG | + | chr1_4:70149709-70149728 | Msa0181870:intron | 40.0% |
| ! | AAAGCCTTATCTTAGATCGG+GGG | + | chr1_4:70149710-70149729 | Msa0181870:intron | 40.0% |
| AATGGTTTGAGCCACAGATA+AGG | + | chr1_4:70149740-70149759 | Msa0181870:intron | 40.0% | |
| TTGAGCCACAGATAAGGAAT+TGG | + | chr1_4:70149746-70149765 | Msa0181870:intron | 40.0% | |
| GCAGATTAACAACAGATTGC+AGG | - | chr1_4:70149927-70149946 | None:intergenic | 40.0% | |
| TTAATCTGCCTTCTTTCCGA+CGG | + | chr1_4:70149938-70149957 | Msa0181870:intron | 40.0% | |
| !! | TAGTAAAGGTATTGTGCCGT+CGG | - | chr1_4:70149957-70149976 | None:intergenic | 40.0% |
| GCACAATACCTTTACTATGC+TGG | + | chr1_4:70149960-70149979 | Msa0181870:intron | 40.0% | |
| ! | GGCTTTATAAGCACTGCAAA+AGG | - | chr1_4:70150006-70150025 | None:intergenic | 40.0% |
| !!! | AAGCTATTGCTTTTTCCCCT+TGG | + | chr1_4:70150054-70150073 | Msa0181870:intron | 40.0% |
| ! | AGAGTGTGATGACTAGTTCA+TGG | + | chr1_4:70150278-70150297 | Msa0181870:intron | 40.0% |
| AAACAGTCAGTTAGCAATGC+TGG | + | chr1_4:70150414-70150433 | Msa0181870:intron | 40.0% | |
| ! | TTAGAGTGCTTGGCATTATG+TGG | + | chr1_4:70150512-70150531 | Msa0181870:intron | 40.0% |
| ! | CTCTTTGTTTCGTTCACAAG+GGG | + | chr1_4:70150649-70150668 | Msa0181870:intron | 40.0% |
| ! | AGTCTTGTATCCCTATAGCT+AGG | - | chr1_4:70150875-70150894 | None:intergenic | 40.0% |
| ! | GAGTAAGCTTTAGCTCAATG+GGG | - | chr1_4:70151051-70151070 | None:intergenic | 40.0% |
| ! | GGAGTAAGCTTTAGCTCAAT+GGG | - | chr1_4:70151052-70151071 | None:intergenic | 40.0% |
| ! | TGGAGTAAGCTTTAGCTCAA+TGG | - | chr1_4:70151053-70151072 | None:intergenic | 40.0% |
| AACCGAACTACAACAACATC+GGG | + | chr1_4:70151152-70151171 | Msa0181870:intron | 40.0% | |
| GCTTCAGTTGTTGTATTTGC+TGG | - | chr1_4:70151178-70151197 | None:intergenic | 40.0% | |
| ! | GCAGATATAAAAGCGTAGCA+CGG | + | chr1_4:70151412-70151431 | Msa0181870:intron | 40.0% |
| ! | ATAAAAGCGTAGCACGGATA+CGG | + | chr1_4:70151418-70151437 | Msa0181870:intron | 40.0% |
| GTTAGTATCCATGTCGTATC+CGG | - | chr1_4:70151453-70151472 | None:intergenic | 40.0% | |
| !! | GTAATTATAGGTGTCGGTGT+CGG | + | chr1_4:70151516-70151535 | Msa0181870:intron | 40.0% |
| TTGACATGTGCTATGAAGCA+CGG | - | chr1_4:70151588-70151607 | None:intergenic | 40.0% | |
| CATAGCACATGTCAAACAAG+GGG | + | chr1_4:70151593-70151612 | Msa0181870:intron | 40.0% | |
| !! | GAAAGCGTCACATGATATGT+GGG | + | chr1_4:70151675-70151694 | Msa0181870:intron | 40.0% |
| ! | GAGAACTGGGCTCAAAATTT+TGG | + | chr1_4:70151737-70151756 | Msa0181870:intron | 40.0% |
| ! | AATTTTGGGCCATGGAAGAT+CGG | + | chr1_4:70151752-70151771 | Msa0181870:intron | 40.0% |
| !!! | GATTCAGCTGCTTTTGAGAT+TGG | + | chr1_4:70151777-70151796 | Msa0181870:intron | 40.0% |
| ! | ACTAGAACGTGTTTTTCCAG+TGG | + | chr1_4:70151824-70151843 | Msa0181870:intron | 40.0% |
| TTGGGGAGAAATGAAGAAGA+GGG | - | chr1_4:70152258-70152277 | None:intergenic | 40.0% | |
| TTTACATCTAATGTGCGCAC+AGG | + | chr1_4:70152571-70152590 | Msa0181870:intron | 40.0% | |
| AAGCTGCTTCACAATCAAAC+AGG | - | chr1_4:70152634-70152653 | None:intergenic | 40.0% | |
| !! | TGTAATTGGTGGTGTTGGAT+TGG | + | chr1_4:70152680-70152699 | Msa0181870:CDS | 40.0% |
| ! | AAAGTACTTGAAGCATCTCG+AGG | - | chr1_4:70152879-70152898 | None:intergenic | 40.0% |
| ! | CTCTTTTTGTGCTGTCAGAT+GGG | - | chr1_4:70152917-70152936 | None:intergenic | 40.0% |
| ! | TCTCTTTTTGTGCTGTCAGA+TGG | - | chr1_4:70152918-70152937 | None:intergenic | 40.0% |
| TGACAGCACAAAAAGAGAAG+TGG | + | chr1_4:70152920-70152939 | Msa0181870:CDS | 40.0% | |
| ATGCTTTAATCAGTGTCTCC+TGG | + | chr1_4:70153001-70153020 | Msa0181870:intron | 40.0% | |
| TGCTTTAATCAGTGTCTCCT+GGG | + | chr1_4:70153002-70153021 | Msa0181870:intron | 40.0% | |
| ! | TTGCTTGTCCTCTTTTGTCT+TGG | + | chr1_4:70153160-70153179 | Msa0181870:intron | 40.0% |
| GTCTTGGTTTATCACCTGAT+TGG | + | chr1_4:70153176-70153195 | Msa0181870:intron | 40.0% | |
| AACACTTGTTTATTGCAGCG+AGG | + | chr1_4:70153229-70153248 | Msa0181870:intron | 40.0% | |
| CAAACAGAACCAAGGATGTT+GGG | - | chr1_4:70153686-70153705 | None:intergenic | 40.0% | |
| ACAAACAGAACCAAGGATGT+TGG | - | chr1_4:70153687-70153706 | None:intergenic | 40.0% | |
| TGTAGTACAGAATACAGAGG+AGG | - | chr1_4:70153827-70153846 | None:intergenic | 40.0% | |
| ! | CATTTCTTTACGGGTTATGC+AGG | + | chr1_4:70153946-70153965 | Msa0181870:intron | 40.0% |
| ! | GGGATGGTGGTGAATTGTAA+TGG | - | chr1_4:70148300-70148319 | None:intergenic | 45.0% |
| !! | GATGATGAAGTTGATGGGGA+TGG | - | chr1_4:70148316-70148335 | None:intergenic | 45.0% |
| GCAAGATCAGAAATGAGCAG+AGG | - | chr1_4:70148353-70148372 | None:intergenic | 45.0% | |
| ! | GGGATGGTGGTGAATTGTAA+TGG | - | chr1_4:70148300-70148319 | None:intergenic | 45.0% |
| !! | GATGATGAAGTTGATGGGGA+TGG | - | chr1_4:70148316-70148335 | None:intergenic | 45.0% |
| TGATCTCTTGCAATGGCAGA+TGG | + | chr1_4:70148528-70148547 | Msa0181870:exon | 45.0% | |
| ! | AGGACTTGGTCGTACAACAA+TGG | - | chr1_4:70149382-70149401 | None:intergenic | 45.0% |
| TGAGCAGTCAGCCTTAATTG+CGG | + | chr1_4:70149538-70149557 | Msa0181870:intron | 45.0% | |
| GTCTTTAGCATGCTTGGTAG+AGG | + | chr1_4:70149618-70149637 | Msa0181870:intron | 45.0% | |
| ! | AAGCCTTATCTTAGATCGGG+GGG | + | chr1_4:70149711-70149730 | Msa0181870:intron | 45.0% |
| AGCCACAGATAAGGAATTGG+AGG | + | chr1_4:70149749-70149768 | Msa0181870:intron | 45.0% | |
| GACCTCCAATTCCTTATCTG+TGG | - | chr1_4:70149754-70149773 | None:intergenic | 45.0% | |
| AGATAAGGAATTGGAGGTCC+TGG | + | chr1_4:70149755-70149774 | Msa0181870:intron | 45.0% | |
| GATAAGGAATTGGAGGTCCT+GGG | + | chr1_4:70149756-70149775 | Msa0181870:intron | 45.0% | |
| TGGAAAGCCTGCCTTAACTT+TGG | + | chr1_4:70149896-70149915 | Msa0181870:intron | 45.0% | |
| ACCTTTACTATGCTGGGTTG+AGG | + | chr1_4:70149967-70149986 | Msa0181870:intron | 45.0% | |
| ! | CCTTTACTATGCTGGGTTGA+GGG | + | chr1_4:70149968-70149987 | Msa0181870:intron | 45.0% |
| AGTTCATGGAAGCAATGTGC+AGG | + | chr1_4:70150292-70150311 | Msa0181870:intron | 45.0% | |
| ! | GGTCTCTTTGGTTCAACTGA+GGG | + | chr1_4:70150611-70150630 | Msa0181870:intron | 45.0% |
| ! | TCTTTGGTTCAACTGAGGGA+GGG | + | chr1_4:70150615-70150634 | Msa0181870:intron | 45.0% |
| TTTGTTTCGTTCACAAGGGG+AGG | + | chr1_4:70150652-70150671 | Msa0181870:intron | 45.0% | |
| TTGTTTCGTTCACAAGGGGA+GGG | + | chr1_4:70150653-70150672 | Msa0181870:intron | 45.0% | |
| ! | AAGCTCTAACGCCTAGCTAT+AGG | + | chr1_4:70150861-70150880 | Msa0181870:intron | 45.0% |
| ! | AGCTCTAACGCCTAGCTATA+GGG | + | chr1_4:70150862-70150881 | Msa0181870:intron | 45.0% |
| GTTGTGACACCTTTCAGTCA+GGG | - | chr1_4:70151272-70151291 | None:intergenic | 45.0% | |
| TGTTGTGACACCTTTCAGTC+AGG | - | chr1_4:70151273-70151292 | None:intergenic | 45.0% | |
| !! | AGCTGCTTCTTTGGTGTTAG+TGG | - | chr1_4:70151364-70151383 | None:intergenic | 45.0% |
| AACACCAAAGAAGCAGCTGA+AGG | + | chr1_4:70151366-70151385 | Msa0181870:intron | 45.0% | |
| GAGTTGTGTCTCTTCCTTAC+TGG | - | chr1_4:70151392-70151411 | None:intergenic | 45.0% | |
| TATGAAGCACGGACACTTCT+CGG | - | chr1_4:70151577-70151596 | None:intergenic | 45.0% | |
| TATCATGTGACGCTTTCCCA+GGG | - | chr1_4:70151672-70151691 | None:intergenic | 45.0% | |
| ATATCATGTGACGCTTTCCC+AGG | - | chr1_4:70151673-70151692 | None:intergenic | 45.0% | |
| !! | GGAAAGCGTCACATGATATG+TGG | + | chr1_4:70151674-70151693 | Msa0181870:intron | 45.0% |
| ! | GATATGTGGGTTTGAAGCAG+CGG | + | chr1_4:70151688-70151707 | Msa0181870:intron | 45.0% |
| CTTCACTCACAAAAGCTCTC+AGG | - | chr1_4:70151714-70151733 | None:intergenic | 45.0% | |
| TGTGAGTGAAGTGTGAGAAC+TGG | + | chr1_4:70151723-70151742 | Msa0181870:intron | 45.0% | |
| GTGAGTGAAGTGTGAGAACT+GGG | + | chr1_4:70151724-70151743 | Msa0181870:intron | 45.0% | |
| ! | AGAACGTGTTTTTCCAGTGG+TGG | + | chr1_4:70151827-70151846 | Msa0181870:intron | 45.0% |
| TATCAAAAGGGATCCACCAC+TGG | - | chr1_4:70151843-70151862 | None:intergenic | 45.0% | |
| !! | TTCCAATTTTCGGGGAGAGA+GGG | - | chr1_4:70152209-70152228 | None:intergenic | 45.0% |
| !! | TTTCCAATTTTCGGGGAGAG+AGG | - | chr1_4:70152210-70152229 | None:intergenic | 45.0% |
| CTCCCCGAAAATTGGAAACA+AGG | + | chr1_4:70152212-70152231 | Msa0181870:intron | 45.0% | |
| AGAAATGAAGAAGAGGGGAG+GGG | - | chr1_4:70152252-70152271 | None:intergenic | 45.0% | |
| GAGAAATGAAGAAGAGGGGA+GGG | - | chr1_4:70152253-70152272 | None:intergenic | 45.0% | |
| TGGGGAGAAATGAAGAAGAG+GGG | - | chr1_4:70152257-70152276 | None:intergenic | 45.0% | |
| GTTGGGGAGAAATGAAGAAG+AGG | - | chr1_4:70152259-70152278 | None:intergenic | 45.0% | |
| ATATTACCCCTGCACTCTGA+AGG | - | chr1_4:70152536-70152555 | None:intergenic | 45.0% | |
| !! | GCTAGTGTAATTGGTGGTGT+TGG | + | chr1_4:70152675-70152694 | Msa0181870:CDS | 45.0% |
| GAATTTCCAGGCCATTCTCT+AGG | + | chr1_4:70152717-70152736 | Msa0181870:CDS | 45.0% | |
| CAGAAGGATCACCTAGAGAA+TGG | - | chr1_4:70152731-70152750 | None:intergenic | 45.0% | |
| ! | GGGCGTAATGTCAATTTTGG+TGG | + | chr1_4:70152801-70152820 | Msa0181870:CDS | 45.0% |
| TACCTGTAGATGCAGTTTCC+AGG | + | chr1_4:70152829-70152848 | Msa0181870:CDS | 45.0% | |
| TAGTGGTATTGTCTCAGGTC+CGG | - | chr1_4:70152856-70152875 | None:intergenic | 45.0% | |
| ACTTGTTTATTGCAGCGAGG+TGG | + | chr1_4:70153232-70153251 | Msa0181870:intron | 45.0% | |
| GAAAACTGCCCTTAGGTAGT+TGG | + | chr1_4:70153447-70153466 | Msa0181870:intron | 45.0% | |
| AAAATGGGTCCCAACATCCT+TGG | + | chr1_4:70153674-70153693 | Msa0181870:intron | 45.0% | |
| AGGCAGACACACTAAAGTGA+AGG | - | chr1_4:70153807-70153826 | None:intergenic | 45.0% | |
| CGCATACAACCTTAAACCCA+AGG | - | chr1_4:70154087-70154106 | None:intergenic | 45.0% | |
| !! | AGTTTGGTCTTAGCCTGTCT+AGG | - | chr1_4:70154117-70154136 | None:intergenic | 45.0% |
| !! | GAAAAAAATAAAAAATAAAA+AGG | - | chr1_4:70152953-70152972 | None:intergenic | 5.0% |
| !! | GATGAAGTTGATGGGGATGG+TGG | - | chr1_4:70148313-70148332 | None:intergenic | 50.0% |
| !! | GATGAAGTTGATGGGGATGG+TGG | - | chr1_4:70148313-70148332 | None:intergenic | 50.0% |
| TTGCAATGGCAGATGGCTTC+TGG | + | chr1_4:70148535-70148554 | Msa0181870:exon | 50.0% | |
| CGTTGTTTGTGGAGCTTACG+TGG | + | chr1_4:70148888-70148907 | Msa0181870:intron | 50.0% | |
| GAGCTTACGTGGTATAGACG+TGG | + | chr1_4:70148899-70148918 | Msa0181870:intron | 50.0% | |
| CTTAATTGCGGCTACCTCTG+CGG | + | chr1_4:70149550-70149569 | Msa0181870:intron | 50.0% | |
| ! | CTACCCCCCGATCTAAGATA+AGG | - | chr1_4:70149717-70149736 | None:intergenic | 50.0% |
| ATTTGACCGGGTTTGAACCC+AGG | - | chr1_4:70149776-70149795 | None:intergenic | 50.0% | |
| TCCTAAAGTGTGGACACGGT+GGG | - | chr1_4:70149869-70149888 | None:intergenic | 50.0% | |
| CACCTCCTAAAGTGTGGACA+CGG | - | chr1_4:70149873-70149892 | None:intergenic | 50.0% | |
| CCAACACACCTCCTAAAGTG+TGG | - | chr1_4:70149879-70149898 | None:intergenic | 50.0% | |
| ! | CCACACTTTAGGAGGTGTGT+TGG | + | chr1_4:70149876-70149895 | Msa0181870:intron | 50.0% |
| TGCAGGGGTAGCCAAAGTTA+AGG | - | chr1_4:70149910-70149929 | None:intergenic | 50.0% | |
| GTATTGTGCCGTCGGAAAGA+AGG | - | chr1_4:70149949-70149968 | None:intergenic | 50.0% | |
| CCCTCAACCCAGCATAGTAA+AGG | - | chr1_4:70149971-70149990 | None:intergenic | 50.0% | |
| CAAGCATTCCGAATGGTAGC+TGG | - | chr1_4:70150206-70150225 | None:intergenic | 50.0% | |
| ! | GGGTCTCTTTGGTTCAACTG+AGG | + | chr1_4:70150610-70150629 | Msa0181870:intron | 50.0% |
| ! | CTCTTTGGTTCAACTGAGGG+AGG | + | chr1_4:70150614-70150633 | Msa0181870:intron | 50.0% |
| ! | CTTTGGTTCAACTGAGGGAG+GGG | + | chr1_4:70150616-70150635 | Msa0181870:intron | 50.0% |
| TGTTTCGTTCACAAGGGGAG+GGG | + | chr1_4:70150654-70150673 | Msa0181870:intron | 50.0% | |
| GGCCCGATGTTGTTGTAGTT+CGG | - | chr1_4:70151157-70151176 | None:intergenic | 50.0% | |
| CAGTTGTAGCCCTGACTGAA+AGG | + | chr1_4:70151260-70151279 | Msa0181870:intron | 50.0% | |
| AGCAGCGATTTCATAAGCCC+TGG | + | chr1_4:70151652-70151671 | Msa0181870:intron | 50.0% | |
| GCAGCGATTTCATAAGCCCT+GGG | + | chr1_4:70151653-70151672 | Msa0181870:intron | 50.0% | |
| ! | GGGCTCAAAATTTTGGGCCA+TGG | + | chr1_4:70151744-70151763 | Msa0181870:intron | 50.0% |
| CTGAATCTGCCGATCTTCCA+TGG | - | chr1_4:70151764-70151783 | None:intergenic | 50.0% | |
| !! | ATTTTCGGGGAGAGAGGGAA+GGG | - | chr1_4:70152204-70152223 | None:intergenic | 50.0% |
| !! | AATTTTCGGGGAGAGAGGGA+AGG | - | chr1_4:70152205-70152224 | None:intergenic | 50.0% |
| TTCCCTCTCTCCCCGAAAAT+TGG | + | chr1_4:70152204-70152223 | Msa0181870:intron | 50.0% | |
| GGAGAAATGAAGAAGAGGGG+AGG | - | chr1_4:70152254-70152273 | None:intergenic | 50.0% | |
| ATTATGCACCTCATTGCCCG+AGG | - | chr1_4:70152442-70152461 | None:intergenic | 50.0% | |
| TCTGGGGAGGCTAGTGTAAT+TGG | + | chr1_4:70152666-70152685 | Msa0181870:CDS | 50.0% | |
| !! | TTGGTGGTGTTGGATTGGCA+AGG | + | chr1_4:70152685-70152704 | Msa0181870:CDS | 50.0% |
| !! | TGGTGGTGTTGGATTGGCAA+GGG | + | chr1_4:70152686-70152705 | Msa0181870:CDS | 50.0% |
| !! | AGGGGTGTTGGTGAATTTCC+AGG | + | chr1_4:70152705-70152724 | Msa0181870:CDS | 50.0% |
| TCTAGGTGATCCTTCTGCCA+TGG | + | chr1_4:70152734-70152753 | Msa0181870:CDS | 50.0% | |
| CTAGGTGATCCTTCTGCCAT+GGG | + | chr1_4:70152735-70152754 | Msa0181870:CDS | 50.0% | |
| TAGGTGATCCTTCTGCCATG+GGG | + | chr1_4:70152736-70152755 | Msa0181870:CDS | 50.0% | |
| AACACCACTAAGATGCCCCA+TGG | - | chr1_4:70152754-70152773 | None:intergenic | 50.0% | |
| ! | ATGGGGCATCTTAGTGGTGT+TGG | + | chr1_4:70152753-70152772 | Msa0181870:CDS | 50.0% |
| !! | CATCTTAGTGGTGTTGGTGG+TGG | + | chr1_4:70152759-70152778 | Msa0181870:CDS | 50.0% |
| GCCCTGATCTTGCACGAAAT+GGG | + | chr1_4:70152781-70152800 | Msa0181870:CDS | 50.0% | |
| GCCCATTTCGTGCAAGATCA+GGG | - | chr1_4:70152785-70152804 | None:intergenic | 50.0% | |
| AGTGGTATTGTCTCAGGTCC+GGG | - | chr1_4:70152855-70152874 | None:intergenic | 50.0% | |
| ! | CGAGGTAGTGGTATTGTCTC+AGG | - | chr1_4:70152861-70152880 | None:intergenic | 50.0% |
| ! | CTTGAAGCATCTCGAGGTAG+TGG | - | chr1_4:70152873-70152892 | None:intergenic | 50.0% |
| ! | ACTTGCGCCTTCAGTTTTCG+CGG | + | chr1_4:70154004-70154023 | Msa0181870:CDS | 50.0% |
| ! | GCTGGTTCACCTTGGGTTTA+AGG | + | chr1_4:70154075-70154094 | Msa0181870:three_prime_UTR | 50.0% |
| TATGCGCTCATAGCCTAGAC+AGG | + | chr1_4:70154101-70154120 | Msa0181870:three_prime_UTR | 50.0% | |
| ! | CTCTGCGCTGGTGTCTGTTA+TGG | + | chr1_4:70149109-70149128 | Msa0181870:intron | 55.0% |
| CGCAGAGGTAGCCGCAATTA+AGG | - | chr1_4:70149552-70149571 | None:intergenic | 55.0% | |
| TAGATCGGGGGGTAGCTCAA+TGG | + | chr1_4:70149722-70149741 | Msa0181870:intron | 55.0% | |
| CCTAAAGTGTGGACACGGTG+GGG | - | chr1_4:70149868-70149887 | None:intergenic | 55.0% | |
| CTCCTAAAGTGTGGACACGG+TGG | - | chr1_4:70149870-70149889 | None:intergenic | 55.0% | |
| CACCGTGTCCACACTTTAGG+AGG | + | chr1_4:70149868-70149887 | Msa0181870:intron | 55.0% | |
| GGGGTAGCCAAAGTTAAGGC+AGG | - | chr1_4:70149906-70149925 | None:intergenic | 55.0% | |
| ! | CTATGCTGGGTTGAGGGAGT+TGG | + | chr1_4:70149974-70149993 | Msa0181870:intron | 55.0% |
| GGAGACCACCAGCTACCATT+CGG | + | chr1_4:70150195-70150214 | Msa0181870:intron | 55.0% | |
| GCATTCCGAATGGTAGCTGG+TGG | - | chr1_4:70150203-70150222 | None:intergenic | 55.0% | |
| GTTTCGTTCACAAGGGGAGG+GGG | + | chr1_4:70150655-70150674 | Msa0181870:intron | 55.0% | |
| TTTCGTTCACAAGGGGAGGG+GGG | + | chr1_4:70150656-70150675 | Msa0181870:intron | 55.0% | |
| ! | CTGGCCTTCAGCTGCTTCTT+TGG | - | chr1_4:70151373-70151392 | None:intergenic | 55.0% |
| GAAGCAGCTGAAGGCCAGTA+AGG | + | chr1_4:70151375-70151394 | Msa0181870:intron | 55.0% | |
| ACATGACACGTGTCCGACAC+CGG | + | chr1_4:70151539-70151558 | Msa0181870:intron | 55.0% | |
| !! | TTCTCGGATTAGCCGTGTCC+CGG | - | chr1_4:70151561-70151580 | None:intergenic | 55.0% |
| !! | TTTTCGGGGAGAGAGGGAAG+GGG | - | chr1_4:70152203-70152222 | None:intergenic | 55.0% |
| GTTGCAGATACGGCACCTTC+TGG | + | chr1_4:70152411-70152430 | Msa0181870:intron | 55.0% | |
| ACCGCTTCCTTCAGAGTGCA+GGG | + | chr1_4:70152526-70152545 | Msa0181870:CDS | 55.0% | |
| GCACAGGTGCTAGCTATCAC+TGG | + | chr1_4:70152587-70152606 | Msa0181870:intron | 55.0% | |
| GGGGAGGCTAGTGTAATTGG+TGG | + | chr1_4:70152669-70152688 | Msa0181870:CDS | 55.0% | |
| !! | GGTGGTGTTGGATTGGCAAG+GGG | + | chr1_4:70152687-70152706 | Msa0181870:CDS | 55.0% |
| !! | GTTGGATTGGCAAGGGGTGT+TGG | + | chr1_4:70152693-70152712 | Msa0181870:CDS | 55.0% |
| GGATCACCTAGAGAATGGCC+TGG | - | chr1_4:70152726-70152745 | None:intergenic | 55.0% | |
| CTAAGATGCCCCATGGCAGA+AGG | - | chr1_4:70152747-70152766 | None:intergenic | 55.0% | |
| ! | TCTGCCATGGGGCATCTTAG+TGG | + | chr1_4:70152747-70152766 | Msa0181870:CDS | 55.0% |
| ! | GGGCATCTTAGTGGTGTTGG+TGG | + | chr1_4:70152756-70152775 | Msa0181870:CDS | 55.0% |
| GGCCCTGATCTTGCACGAAA+TGG | + | chr1_4:70152780-70152799 | Msa0181870:CDS | 55.0% | |
| CGCCCATTTCGTGCAAGATC+AGG | - | chr1_4:70152786-70152805 | None:intergenic | 55.0% | |
| GGCCTGGAAACTGCATCTAC+AGG | - | chr1_4:70152834-70152853 | None:intergenic | 55.0% | |
| GTAGATGCAGTTTCCAGGCC+CGG | + | chr1_4:70152834-70152853 | Msa0181870:CDS | 55.0% | |
| AAGGCAGTTGCTGCACAAGC+CGG | - | chr1_4:70153295-70153314 | None:intergenic | 55.0% | |
| ! | GATACCTTGCAAGGCGCTCA+AGG | - | chr1_4:70153314-70153333 | None:intergenic | 55.0% |
| AGGCGCAAGTAGCTTGACTC+AGG | - | chr1_4:70153994-70154013 | None:intergenic | 55.0% | |
| CAGGAGACCGCGAAAACTGA+AGG | - | chr1_4:70154014-70154033 | None:intergenic | 55.0% | |
| ! | CTTCAGTTTTCGCGGTCTCC+TGG | + | chr1_4:70154012-70154031 | Msa0181870:CDS | 55.0% |
| ! | AGAGGTGAGCTGGTTCACCT+TGG | + | chr1_4:70154067-70154086 | Msa0181870:exon | 55.0% |
| ! | GAGGTGAGCTGGTTCACCTT+GGG | + | chr1_4:70154068-70154087 | Msa0181870:exon | 55.0% |
| ! | GGTCTTTTGAGCATGCCGCC+CGG | - | chr1_4:70148588-70148607 | None:intergenic | 60.0% |
| GGAGGTCCTGGGTTCAAACC+CGG | + | chr1_4:70149767-70149786 | Msa0181870:intron | 60.0% | |
| CCCCACCGTGTCCACACTTT+AGG | + | chr1_4:70149865-70149884 | Msa0181870:intron | 60.0% | |
| TGGTTCAACTGAGGGAGGGG+AGG | + | chr1_4:70150619-70150638 | Msa0181870:intron | 60.0% | |
| GCGTAGCACGGATACGGACA+CGG | + | chr1_4:70151424-70151443 | Msa0181870:intron | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | + | chr1_4:70151431-70151450 | Msa0181870:intron | 60.0% | |
| CACGGACACCGGATACGACA+TGG | + | chr1_4:70151442-70151461 | Msa0181870:intron | 60.0% | |
| CATGACACGTGTCCGACACC+GGG | + | chr1_4:70151540-70151559 | Msa0181870:intron | 60.0% | |
| ! | GATTAGCCGTGTCCCGGTGT+CGG | - | chr1_4:70151555-70151574 | None:intergenic | 60.0% |
| GCTGCTGCTACTGTGCTCGT+TGG | - | chr1_4:70151638-70151657 | None:intergenic | 60.0% | |
| GGCACCTTCTGGTGTGACCT+CGG | + | chr1_4:70152422-70152441 | Msa0181870:CDS | 60.0% | |
| GCACCTTCTGGTGTGACCTC+GGG | + | chr1_4:70152423-70152442 | Msa0181870:CDS | 60.0% | |
| TTGCCCGAGGTCACACCAGA+AGG | - | chr1_4:70152429-70152448 | None:intergenic | 60.0% | |
| TGGTGTGACCTCGGGCAATG+AGG | + | chr1_4:70152431-70152450 | Msa0181870:CDS | 60.0% | |
| GACCGCTTCCTTCAGAGTGC+AGG | + | chr1_4:70152525-70152544 | Msa0181870:CDS | 60.0% | |
| ! | CCCCTGCACTCTGAAGGAAG+CGG | - | chr1_4:70152530-70152549 | None:intergenic | 60.0% |
| CCGCTTCCTTCAGAGTGCAG+GGG | + | chr1_4:70152527-70152546 | Msa0181870:CDS | 60.0% | |
| TATTGTCTCAGGTCCGGGCC+TGG | - | chr1_4:70152850-70152869 | None:intergenic | 60.0% | |
| ACTGCCTTGAGCGCCTTGCA+AGG | + | chr1_4:70153307-70153326 | Msa0181870:CDS | 60.0% | |
| TCTCCTGGCCGAAGAAGTGG+CGG | + | chr1_4:70154027-70154046 | Msa0181870:CDS | 60.0% | |
| ! | CTTTTGAGCATGCCGCCCGG+AGG | - | chr1_4:70148585-70148604 | None:intergenic | 65.0% |
| TGACACGCAGCTCTCTGCGC+TGG | + | chr1_4:70149097-70149116 | Msa0181870:intron | 65.0% | |
| GTTCACAAGGGGAGGGGGGA+GGG | + | chr1_4:70150660-70150679 | Msa0181870:intron | 65.0% | |
| TTCACAAGGGGAGGGGGGAG+GGG | + | chr1_4:70150661-70150680 | Msa0181870:intron | 65.0% | |
| ACGTGTCCGACACCGGGACA+CGG | + | chr1_4:70151546-70151565 | Msa0181870:intron | 65.0% | |
| CGGTCTCCTGGCCGAAGAAG+TGG | + | chr1_4:70154024-70154043 | Msa0181870:CDS | 65.0% | |
| CTCCTGGCCGAAGAAGTGGC+GGG | + | chr1_4:70154028-70154047 | Msa0181870:CDS | 65.0% | |
| GTCCAGGCCCGCCACTTCTT+CGG | - | chr1_4:70154038-70154057 | None:intergenic | 65.0% | |
| GCAGCCGCATCTCCCTCCTC+CGG | + | chr1_4:70148566-70148585 | Msa0181870:CDS | 70.0% | |
| CAGCCGCATCTCCCTCCTCC+GGG | + | chr1_4:70148567-70148586 | Msa0181870:CDS | 70.0% | |
| TGAGCATGCCGCCCGGAGGA+GGG | - | chr1_4:70148581-70148600 | None:intergenic | 70.0% | |
| TTGAGCATGCCGCCCGGAGG+AGG | - | chr1_4:70148582-70148601 | None:intergenic | 70.0% | |
| CGTTCACAAGGGGAGGGGGG+AGG | + | chr1_4:70150659-70150678 | Msa0181870:intron | 70.0% | |
| CACCTCTTGCCGCGAGGTCC+AGG | - | chr1_4:70154054-70154073 | None:intergenic | 70.0% | |
| CCAGCTCACCTCTTGCCGCG+AGG | - | chr1_4:70154060-70154079 | None:intergenic | 70.0% | |
| CCTCGCGGCAAGAGGTGAGC+TGG | + | chr1_4:70154057-70154076 | Msa0181870:exon | 70.0% | |
| CCGCCCGGAGGAGGGAGATG+CGG | - | chr1_4:70148573-70148592 | None:intergenic | 75.0% | |
| CCGCATCTCCCTCCTCCGGG+CGG | + | chr1_4:70148570-70148589 | Msa0181870:CDS | 75.0% | |
| GGCCCGCCACTTCTTCGGCC+AGG | - | chr1_4:70154033-70154052 | None:intergenic | 75.0% | |
| !! | GGCCGAAGAAGTGGCGGGCC+TGG | + | chr1_4:70154033-70154052 | Msa0181870:CDS | 75.0% |
| !! | AGTGGCGGGCCTGGACCTCG+CGG | + | chr1_4:70154042-70154061 | Msa0181870:CDS | 75.0% |
| GGCCTGGACCTCGCGGCAAG+AGG | + | chr1_4:70154049-70154068 | Msa0181870:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 70148164 | 70154357 | 70148164 | ID=Msa0181870;Name=Msa0181870 |
| chr1_4 | mRNA | 70148164 | 70154357 | 70148164 | ID=Msa0181870-mRNA-1;Parent=Msa0181870;Name=Msa0181870-mRNA-1;_AED=0.15;_eAED=0.15;_QI=217|0.83|0.85|1|0.83|0.71|7|283|253 |
| chr1_4 | exon | 70148164 | 70148223 | 70148164 | ID=Msa0181870-mRNA-1:exon:23417;Parent=Msa0181870-mRNA-1 |
| chr1_4 | exon | 70148383 | 70148621 | 70148383 | ID=Msa0181870-mRNA-1:exon:23418;Parent=Msa0181870-mRNA-1 |
| chr1_4 | exon | 70152418 | 70152548 | 70152418 | ID=Msa0181870-mRNA-1:exon:23419;Parent=Msa0181870-mRNA-1 |
| chr1_4 | exon | 70152648 | 70152945 | 70152648 | ID=Msa0181870-mRNA-1:exon:23420;Parent=Msa0181870-mRNA-1 |
| chr1_4 | exon | 70153074 | 70153135 | 70153074 | ID=Msa0181870-mRNA-1:exon:23421;Parent=Msa0181870-mRNA-1 |
| chr1_4 | exon | 70153247 | 70153328 | 70153247 | ID=Msa0181870-mRNA-1:exon:23422;Parent=Msa0181870-mRNA-1 |
| chr1_4 | exon | 70153968 | 70154357 | 70153968 | ID=Msa0181870-mRNA-1:exon:23423;Parent=Msa0181870-mRNA-1 |
| chr1_4 | five_prime_UTR | 70148164 | 70148223 | 70148164 | ID=Msa0181870-mRNA-1:five_prime_utr;Parent=Msa0181870-mRNA-1 |
| chr1_4 | five_prime_UTR | 70148383 | 70148539 | 70148383 | ID=Msa0181870-mRNA-1:five_prime_utr;Parent=Msa0181870-mRNA-1 |
| chr1_4 | CDS | 70148540 | 70148621 | 70148540 | ID=Msa0181870-mRNA-1:cds;Parent=Msa0181870-mRNA-1 |
| chr1_4 | CDS | 70152418 | 70152548 | 70152418 | ID=Msa0181870-mRNA-1:cds;Parent=Msa0181870-mRNA-1 |
| chr1_4 | CDS | 70152648 | 70152945 | 70152648 | ID=Msa0181870-mRNA-1:cds;Parent=Msa0181870-mRNA-1 |
| chr1_4 | CDS | 70153074 | 70153135 | 70153074 | ID=Msa0181870-mRNA-1:cds;Parent=Msa0181870-mRNA-1 |
| chr1_4 | CDS | 70153247 | 70153328 | 70153247 | ID=Msa0181870-mRNA-1:cds;Parent=Msa0181870-mRNA-1 |
| chr1_4 | CDS | 70153968 | 70154074 | 70153968 | ID=Msa0181870-mRNA-1:cds;Parent=Msa0181870-mRNA-1 |
| chr1_4 | three_prime_UTR | 70154075 | 70154357 | 70154075 | ID=Msa0181870-mRNA-1:three_prime_utr;Parent=Msa0181870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
