AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0858440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0858440 MtrunA17_Chr5g0405891 85.955 178 2 1 1 178 1 155 2.70e-106 301
Msa0858440 MtrunA17_Chr5g0405871 84.270 178 5 1 1 178 1 155 1.89e-104 296
Msa0858440 MtrunA17_Chr7g0221641 75.141 177 21 1 2 178 3 156 2.22e-85 248
Msa0858440 MtrunA17_Chr7g0259261 75.419 179 20 2 1 178 1 156 1.91e-84 245
Msa0858440 MtrunA17_Chr7g0259271 74.576 177 22 1 2 178 3 156 1.91e-84 245
Msa0858440 MtrunA17_Chr4g0014211 68.539 178 32 2 2 178 9 163 8.16e-80 234
Msa0858440 MtrunA17_Chr3g0139751 66.480 179 35 2 2 178 3 158 6.11e-79 231
Msa0858440 MtrunA17_Chr7g0221621 71.751 177 27 1 2 178 3 156 1.51e-78 231
Msa0858440 MtrunA17_Chr4g0014231 65.730 178 37 2 2 178 21 175 2.24e-78 231
Msa0858440 MtrunA17_Chr7g0259231 64.804 179 38 2 2 178 4 159 3.63e-77 227
Msa0858440 MtrunA17_Chr5g0438791 63.483 178 41 2 1 177 1 155 1.34e-73 218
Msa0858440 MtrunA17_Chr8g0361911 64.607 178 39 2 2 178 3 157 7.72e-73 216
Msa0858440 MtrunA17_Chr7g0259371 62.983 181 41 3 1 178 1 158 1.96e-72 215
Msa0858440 MtrunA17_Chr8g0362291 61.453 179 45 2 1 178 1 156 8.40e-72 214
Msa0858440 MtrunA17_Chr4g0014271 60.674 178 39 4 3 178 5 153 3.12e-66 199
Msa0858440 MtrunA17_Chr4g0014241 63.687 179 35 3 1 178 1 150 3.77e-66 199
Msa0858440 MtrunA17_Chr4g0014261 58.427 178 44 3 2 178 4 152 3.60e-64 194
Msa0858440 MtrunA17_Chr4g0015171 53.107 177 60 1 2 178 7 160 3.57e-63 192
Msa0858440 MtrunA17_Chr7g0259381 58.011 181 36 4 1 178 1 144 1.55e-61 187
Msa0858440 MtrunA17_Chr4g0015151 53.107 177 60 1 2 178 7 160 4.75e-60 184
Msa0858440 MtrunA17_Chr4g0007651 49.083 218 45 4 4 178 26 220 1.42e-58 182
Msa0858440 MtrunA17_Chr4g0009571 51.412 177 60 2 2 178 5 155 7.42e-53 166
Msa0858440 MtrunA17_Chr1g0202631 67.227 119 14 2 62 178 201 296 2.29e-46 153
Msa0858440 MtrunA17_Chr8g0381421 58.904 146 20 2 33 178 1 106 1.02e-44 143
Msa0858440 MtrunA17_Chr7g0259441 52.229 157 50 4 2 136 3 156 6.24e-41 135
Msa0858440 MtrunA17_Chr7g0214701 47.239 163 54 3 2 164 5 135 5.48e-38 127
Msa0858440 MtrunA17_Chr5g0436881 71.084 83 23 1 1 82 31 113 9.08e-37 123
Msa0858440 MtrunA17_Chr7g0259421 41.026 195 38 5 1 141 1 172 4.02e-33 117
Msa0858440 MtrunA17_Chr4g0014221 51.220 123 23 3 56 178 2 87 9.06e-31 107
Msa0858440 MtrunA17_Chr4g0067031 43.195 169 66 3 2 168 236 376 3.65e-30 113
Msa0858440 MtrunA17_Chr4g0007851 50.000 120 35 2 61 178 54 150 1.31e-29 106
Msa0858440 MtrunA17_Chr4g0015161 47.581 124 34 2 32 155 8 100 1.68e-28 102
Msa0858440 MtrunA17_Chr4g0074721 49.650 143 32 5 1 141 1 105 5.77e-28 100
Msa0858440 MtrunA17_Chr1g0211011 34.270 178 78 3 7 168 1 155 3.09e-27 100
Msa0858440 MtrunA17_Chr7g0259391 83.333 60 8 1 1 58 1 60 1.01e-26 96.3
Msa0858440 MtrunA17_Chr7g0259411 37.186 199 68 4 2 157 3 187 1.13e-26 100
Msa0858440 MtrunA17_Chr2g0310471 35.632 174 77 6 7 177 37 178 1.25e-20 84.7
Msa0858440 MtrunA17_Chr5g0447291 31.844 179 80 3 3 177 2 142 9.07e-19 78.6
Msa0858440 MtrunA17_Chr1g0211001 31.325 166 85 5 7 150 1 159 2.54e-18 80.5
Msa0858440 MtrunA17_Chr2g0285701 30.636 173 84 4 7 178 3 140 1.05e-17 75.5
Msa0858440 MtrunA17_Chr4g0071681 77.273 44 9 1 120 162 6 49 1.86e-17 72.0
Msa0858440 MtrunA17_Chr4g0014291 62.264 53 19 1 122 173 3 55 2.19e-17 72.0
Msa0858440 MtrunA17_Chr8g0392111 64.286 56 17 1 1 56 3 55 1.64e-16 70.5
Msa0858440 MtrunA17_Chr1g0210991 29.834 181 66 4 7 170 1 137 1.22e-15 72.4
Msa0858440 MtrunA17_Chr8g0361921 54.688 64 28 1 114 176 15 78 4.50e-15 67.0
Msa0858440 MtrunA17_Chr6g0470511 31.737 167 81 6 7 168 17 155 1.42e-14 70.5
Msa0858440 MtrunA17_Chr8g0335711 29.448 163 80 5 9 165 13 146 1.47e-13 67.4
Msa0858440 MtrunA17_Chr2g0310571 32.370 173 67 6 7 177 20 144 2.19e-13 65.1
Msa0858440 MtrunA17_Chr7g0247861 29.940 167 84 5 7 168 18 156 2.69e-13 66.6
Msa0858440 MtrunA17_Chr8g0335731 27.976 168 85 5 9 169 13 151 4.93e-13 64.3
Msa0858440 MtrunA17_Chr4g0074671 39.175 97 49 2 4 96 9 99 9.23e-13 62.0
Msa0858440 MtrunA17_Chr8g0335691 27.647 170 87 5 7 169 11 151 3.02e-12 63.5
Msa0858440 MtrunA17_Chr2g0330981 28.743 167 82 6 9 168 13 149 5.39e-12 62.8
Msa0858440 MtrunA17_Chr2g0330971 28.313 166 87 5 7 168 11 148 1.02e-11 62.0
Msa0858440 MtrunA17_Chr4g0014281 60.000 50 20 0 120 169 5 54 2.12e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0858440 AT5G42190.1 67.526 194 24 2 1 178 1 171 2.69e-80 236
Msa0858440 AT1G75950.1 68.681 182 28 2 3 178 2 160 9.09e-78 229
Msa0858440 AT1G20140.1 63.978 186 36 4 1 178 1 163 1.08e-76 226
Msa0858440 AT2G25700.1 61.290 186 41 4 1 178 1 163 3.73e-73 218
Msa0858440 AT4G34210.1 61.582 177 41 3 3 178 2 152 3.78e-71 212
Msa0858440 AT4G34470.1 61.017 177 42 3 3 178 2 152 2.51e-70 210
Msa0858440 AT3G21860.1 58.989 178 44 4 3 178 2 152 4.63e-63 191
Msa0858440 AT3G21850.1 57.303 178 48 4 3 178 2 153 6.94e-63 191
Msa0858440 AT3G60010.1 56.111 180 47 4 4 178 2 154 1.08e-60 186
Msa0858440 AT2G03170.1 54.802 177 50 3 3 178 2 149 3.82e-58 179
Msa0858440 AT2G03190.1 49.206 189 60 4 3 178 2 167 1.16e-53 168
Msa0858440 AT3G60020.1 49.724 181 56 4 4 178 2 153 1.72e-51 162
Msa0858440 AT3G21830.1 49.718 177 62 3 3 178 2 152 3.42e-51 161
Msa0858440 AT2G03160.1 43.868 212 60 4 3 178 2 190 3.17e-50 160
Msa0858440 AT2G20160.1 48.864 176 61 3 3 177 2 149 5.61e-49 155
Msa0858440 AT3G25650.1 50.794 189 57 6 3 178 2 167 7.84e-48 154
Msa0858440 AT1G10230.1 50.000 178 63 3 3 177 2 156 1.30e-46 150
Msa0858440 AT3G21840.1 49.650 143 43 4 3 143 2 117 3.88e-33 115
Msa0858440 AT3G53060.1 53.271 107 20 4 30 135 3 80 2.83e-26 96.3
Msa0858440 AT3G61415.1 28.743 167 86 5 7 168 18 156 1.22e-11 62.4
Msa0858440 AT3G61415.2 28.743 167 86 5 7 168 18 156 1.31e-11 62.4
Msa0858440 AT2G45950.5 27.545 167 88 5 7 168 18 156 1.56e-11 62.0
Msa0858440 AT2G45950.2 27.545 167 88 5 7 168 18 156 1.56e-11 62.0
Msa0858440 AT2G45950.3 27.545 167 88 5 7 168 18 156 2.05e-11 61.6
Msa0858440 AT2G45950.1 27.545 167 88 5 7 168 18 156 2.05e-11 61.6
Msa0858440 AT2G45950.4 27.545 167 88 5 7 168 18 156 2.05e-11 61.6

Find 63 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTCAAACCTTCAAGTT+TGG 0.195827 5_4:+55868422 None:intergenic
GAACTCCAATGTTCATCTTT+TGG 0.244306 5_4:-55867636 Msa0858440:three_prime_UTR
CCTTTCAAACCTTCAAGTTT+GGG 0.263318 5_4:+55868423 None:intergenic
CATAGTGATCGTGATTGATT+AGG 0.286315 5_4:+55869139 None:intergenic
ATCGGAAAATAGAGAAACTA+TGG 0.303797 5_4:+55869227 None:intergenic
ATTAGGGTTTGGTTGAGAAT+TGG 0.343607 5_4:+55869156 None:intergenic
CAACGTTACGAGCAAGATCT+TGG 0.349619 5_4:-55868982 Msa0858440:CDS
ATTGGCTGATGCGTTTAATA+TGG 0.369509 5_4:-55867526 Msa0858440:three_prime_UTR
CTTGAATATCAAGAGCTTGC+TGG 0.389953 5_4:-55867878 Msa0858440:CDS
CGAGGATGAGCTTAAGTCTT+GGG 0.409245 5_4:-55868898 Msa0858440:CDS
ATAGTGATCGTGATTGATTA+GGG 0.421660 5_4:+55869140 None:intergenic
AAGATCTTGCTCGTAACGTT+GGG 0.435888 5_4:+55868984 None:intergenic
TGGTTTATTTCTGTGGAGTC+CGG 0.436793 5_4:-55867616 Msa0858440:three_prime_UTR
CGAGTTCGTGAAGGTTGATC+AGG 0.440775 5_4:-55868871 Msa0858440:CDS
GGTTGATGAAGCTGTTGCTT+TGG 0.442319 5_4:-55869066 Msa0858440:CDS
AATGTCTTGCGGATCTCCTC+TGG 0.448832 5_4:+55867811 None:intergenic
AGTGCTACTAGAATGCAATC+AGG 0.452295 5_4:+55869269 None:intergenic
GACTTAAGCTCATCCTCGTT+AGG 0.455978 5_4:+55868903 None:intergenic
TGATCATGTCTGCAACAGTC+TGG 0.461006 5_4:+55867845 None:intergenic
GATCGTGATTGATTAGGGTT+TGG 0.477799 5_4:+55869145 None:intergenic
TGAGTTGTAGGATATTGTTA+TGG 0.486495 5_4:-55868489 Msa0858440:intron
CGAACTTCCTCCTCTTCCTC+TGG 0.494352 5_4:+55867766 None:intergenic
CATGTCTGCAACAGTCTGGC+AGG 0.496105 5_4:+55867849 None:intergenic
CAAGATCTTGCTCGTAACGT+TGG 0.499561 5_4:+55868983 None:intergenic
AAGTAACAGTTGATTATGAT+TGG 0.501129 5_4:-55867544 Msa0858440:three_prime_UTR
TGCTCGTAACGTTGGGAAGA+GGG 0.510548 5_4:+55868991 None:intergenic
TGATTTCTCTCCAGAGGAAG+AGG 0.513536 5_4:-55867776 Msa0858440:CDS
GATGTACTAAAATCTTAGAA+AGG 0.529801 5_4:+55867576 None:intergenic
GACTGTTGCAGACATGATCA+AGG 0.534990 5_4:-55867842 Msa0858440:CDS
TTGCTCGTAACGTTGGGAAG+AGG 0.535258 5_4:+55868990 None:intergenic
AACCTCGAAGGTCTCGCCAT+CGG 0.535779 5_4:+55869085 None:intergenic
GGAAGAGGAGGAAGTTCGTA+GGG 0.537389 5_4:-55867761 Msa0858440:CDS
ATAATCATTCAAATGCCCAT+TGG 0.538622 5_4:+55867734 None:intergenic
CTTTCAAACCTTCAAGTTTG+GGG 0.542669 5_4:+55868424 None:intergenic
GGATAATGAAGATTCATGAC+CGG 0.542799 5_4:+55867597 None:intergenic
ACGAGGATGAGCTTAAGTCT+TGG 0.544399 5_4:-55868899 Msa0858440:CDS
AGGAAGAGGAGGAAGTTCGT+AGG 0.548370 5_4:-55867762 Msa0858440:CDS
ATAAACCAAAAGATGAACAT+TGG 0.560309 5_4:+55867631 None:intergenic
AGTTCGTAGGGAAAACCAAT+GGG 0.562143 5_4:-55867749 Msa0858440:CDS
ACTTCTTAGCATGTATGTCA+AGG 0.564286 5_4:-55867703 Msa0858440:three_prime_UTR
AAGTTCGTAGGGAAAACCAA+TGG 0.564773 5_4:-55867750 Msa0858440:CDS
GTGCTACTAGAATGCAATCA+GGG 0.567754 5_4:+55869270 None:intergenic
CTGATCAACCTTCACGAACT+CGG 0.567841 5_4:+55868872 None:intergenic
TAGAGAAACTATGGGCGTGA+GGG 0.568644 5_4:+55869236 None:intergenic
TTCCGATGGCGAGACCTTCG+AGG 0.579603 5_4:-55869087 Msa0858440:CDS
ATAACATAAAACCACATGAC+AGG 0.581415 5_4:+55867679 None:intergenic
ATCACTCTCAAGAGTTCCGA+TGG 0.585502 5_4:-55869101 Msa0858440:CDS
GATGCGTTTAATATGGTACA+AGG 0.588127 5_4:-55867519 Msa0858440:three_prime_UTR
TTGGGATTCCGAGTTCGTGA+AGG 0.596084 5_4:-55868880 Msa0858440:CDS
GAAGACGATTGCGCTGACAG+TGG 0.597220 5_4:-55869017 Msa0858440:CDS
TCGGAAAATAGAGAAACTAT+GGG 0.607830 5_4:+55869228 None:intergenic
TTTCTCTCCAGAGGAAGAGG+AGG 0.615178 5_4:-55867773 Msa0858440:CDS
AACAGCTTCATCAACCTCGA+AGG 0.615888 5_4:+55869073 None:intergenic
AGAGAAACTATGGGCGTGAG+GGG 0.621802 5_4:+55869237 None:intergenic
TACGAGCAAGATCTTGGCGA+AGG 0.626440 5_4:-55868976 Msa0858440:CDS
ATAGAGAAACTATGGGCGTG+AGG 0.641725 5_4:+55869235 None:intergenic
TGCAATCAGGGTCTCCTACG+TGG 0.645006 5_4:+55869282 None:intergenic
ACTGTTGCAGACATGATCAA+GGG 0.659883 5_4:-55867841 Msa0858440:CDS
TGCTGAAGACAAACCTAACG+AGG 0.677963 5_4:-55868916 Msa0858440:CDS
AAAAGATAAAACCTCCACGT+AGG 0.698192 5_4:-55869296 None:intergenic
TATGTCAAGGACCTGTCATG+TGG 0.711710 5_4:-55867690 Msa0858440:three_prime_UTR
AATCAGGGTCTCCTACGTGG+AGG 0.721787 5_4:+55869285 None:intergenic
GATCAAGGGAAAGACACCAG+AGG 0.742039 5_4:-55867827 Msa0858440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATTTGTTATTTTTTTAA+TGG + chr5_4:55868842-55868861 None:intergenic 10.0%
!!! CAAATTTGTTATTTTTTTAA+TGG + chr5_4:55868842-55868861 None:intergenic 10.0%
!!! TTTTATCGTTTATTTGATTT+GGG - chr5_4:55867989-55868008 Msa0858440:intron 15.0%
!! CATATATACTATACAAAAAT+GGG - chr5_4:55868472-55868491 Msa0858440:CDS 15.0%
!!! ATGTTTATATTATGTTTTGT+TGG - chr5_4:55868566-55868585 Msa0858440:intron 15.0%
!!! TTTTATCGTTTATTTGATTT+GGG - chr5_4:55867989-55868008 Msa0858440:intron 15.0%
!! CATATATACTATACAAAAAT+GGG - chr5_4:55868472-55868491 Msa0858440:CDS 15.0%
!!! ATGTTTATATTATGTTTTGT+TGG - chr5_4:55868566-55868585 Msa0858440:intron 15.0%
!!! GTTTTATCGTTTATTTGATT+TGG - chr5_4:55867988-55868007 Msa0858440:intron 20.0%
!!! TCGTTTATTTGATTTTGTTT+TGG - chr5_4:55868022-55868041 Msa0858440:intron 20.0%
!! TATTATTAACAGCTATACAT+AGG + chr5_4:55868111-55868130 None:intergenic 20.0%
!! TGTATAGCTGTTAATAATAA+AGG - chr5_4:55868112-55868131 Msa0858440:intron 20.0%
!! CTGTTAATAATAAAGGATTA+GGG - chr5_4:55868119-55868138 Msa0858440:intron 20.0%
!!! ATTTCAATTTGTCTTTTGTT+TGG - chr5_4:55868212-55868231 Msa0858440:intron 20.0%
!!! TTTCAATTTGTCTTTTGTTT+GGG - chr5_4:55868213-55868232 Msa0858440:intron 20.0%
!!! GGCAAAATATATATTTTCAA+AGG + chr5_4:55868347-55868366 None:intergenic 20.0%
!! ATATATGCATATAAACTCAA+AGG + chr5_4:55868459-55868478 None:intergenic 20.0%
!! GCATATATACTATACAAAAA+TGG - chr5_4:55868471-55868490 Msa0858440:CDS 20.0%
!!! GATATTTTTTTTTCCTTTGT+AGG - chr5_4:55868878-55868897 Msa0858440:CDS 20.0%
!!! GTTTTATCGTTTATTTGATT+TGG - chr5_4:55867988-55868007 Msa0858440:intron 20.0%
!!! TCGTTTATTTGATTTTGTTT+TGG - chr5_4:55868022-55868041 Msa0858440:intron 20.0%
!! TATTATTAACAGCTATACAT+AGG + chr5_4:55868111-55868130 None:intergenic 20.0%
!! TGTATAGCTGTTAATAATAA+AGG - chr5_4:55868112-55868131 Msa0858440:intron 20.0%
!! CTGTTAATAATAAAGGATTA+GGG - chr5_4:55868119-55868138 Msa0858440:intron 20.0%
!!! ATTTCAATTTGTCTTTTGTT+TGG - chr5_4:55868212-55868231 Msa0858440:intron 20.0%
!!! TTTCAATTTGTCTTTTGTTT+GGG - chr5_4:55868213-55868232 Msa0858440:intron 20.0%
!!! GGCAAAATATATATTTTCAA+AGG + chr5_4:55868347-55868366 None:intergenic 20.0%
!! ATATATGCATATAAACTCAA+AGG + chr5_4:55868459-55868478 None:intergenic 20.0%
!! GCATATATACTATACAAAAA+TGG - chr5_4:55868471-55868490 Msa0858440:CDS 20.0%
!!! GATATTTTTTTTTCCTTTGT+AGG - chr5_4:55868878-55868897 Msa0858440:CDS 20.0%
! TTTCCGATTCAGAAAAAATT+AGG - chr5_4:55867577-55867596 Msa0858440:three_prime_UTR 25.0%
! TTCCGATTCAGAAAAAATTA+GGG - chr5_4:55867578-55867597 Msa0858440:three_prime_UTR 25.0%
!!! AACCCTAATTTTTTCTGAAT+CGG + chr5_4:55867583-55867602 None:intergenic 25.0%
!!! TGATTTTGTTTTGGAATGTT+TGG - chr5_4:55868031-55868050 Msa0858440:intron 25.0%
!!! GATTTTGTTTTGGAATGTTT+GGG - chr5_4:55868032-55868051 Msa0858440:intron 25.0%
!!! ATTTTGTTTTGGAATGTTTG+GGG - chr5_4:55868033-55868052 Msa0858440:intron 25.0%
! TGAAAAATCTGAATAGTTTC+TGG - chr5_4:55868081-55868100 Msa0858440:intron 25.0%
! GCTGTTAATAATAAAGGATT+AGG - chr5_4:55868118-55868137 Msa0858440:intron 25.0%
!! TAATAAAGGATTAGGGTTTT+TGG - chr5_4:55868126-55868145 Msa0858440:intron 25.0%
!!! TTTGTTTGGGTTGAATTTAA+TGG - chr5_4:55868226-55868245 Msa0858440:intron 25.0%
!!! TCTTTTTGTTTTTGAGTTGT+AGG - chr5_4:55868288-55868307 Msa0858440:intron 25.0%
!! AGAGATATTCTGTTTTCATT+TGG - chr5_4:55868398-55868417 Msa0858440:intron 25.0%
! TGAATCTAAAAGGAATCAAA+AGG + chr5_4:55868655-55868674 None:intergenic 25.0%
!! ATTCCTTTTAGATTCAAACT+TGG - chr5_4:55868659-55868678 Msa0858440:intron 25.0%
! TGATAACCAAATGATGAATA+TGG - chr5_4:55868731-55868750 Msa0858440:intron 25.0%
!! TAATAATCCTATGTTTCTGA+TGG - chr5_4:55868796-55868815 Msa0858440:intron 25.0%
!! TTTTAATGGCAATGAGTTTA+AGG + chr5_4:55868828-55868847 None:intergenic 25.0%
! ATAAACCAAAAGATGAACAT+TGG + chr5_4:55869161-55869180 None:intergenic 25.0%
! GATGTACTAAAATCTTAGAA+AGG + chr5_4:55869216-55869235 None:intergenic 25.0%
! AAGTAACAGTTGATTATGAT+TGG - chr5_4:55869245-55869264 Msa0858440:five_prime_UTR 25.0%
! TTTCCGATTCAGAAAAAATT+AGG - chr5_4:55867577-55867596 Msa0858440:three_prime_UTR 25.0%
! TTCCGATTCAGAAAAAATTA+GGG - chr5_4:55867578-55867597 Msa0858440:three_prime_UTR 25.0%
!!! AACCCTAATTTTTTCTGAAT+CGG + chr5_4:55867583-55867602 None:intergenic 25.0%
!!! TGATTTTGTTTTGGAATGTT+TGG - chr5_4:55868031-55868050 Msa0858440:intron 25.0%
!!! GATTTTGTTTTGGAATGTTT+GGG - chr5_4:55868032-55868051 Msa0858440:intron 25.0%
!!! ATTTTGTTTTGGAATGTTTG+GGG - chr5_4:55868033-55868052 Msa0858440:intron 25.0%
! TGAAAAATCTGAATAGTTTC+TGG - chr5_4:55868081-55868100 Msa0858440:intron 25.0%
! GCTGTTAATAATAAAGGATT+AGG - chr5_4:55868118-55868137 Msa0858440:intron 25.0%
!! TAATAAAGGATTAGGGTTTT+TGG - chr5_4:55868126-55868145 Msa0858440:intron 25.0%
!!! TTTGTTTGGGTTGAATTTAA+TGG - chr5_4:55868226-55868245 Msa0858440:intron 25.0%
!!! TCTTTTTGTTTTTGAGTTGT+AGG - chr5_4:55868288-55868307 Msa0858440:intron 25.0%
!! AGAGATATTCTGTTTTCATT+TGG - chr5_4:55868398-55868417 Msa0858440:intron 25.0%
! TGAATCTAAAAGGAATCAAA+AGG + chr5_4:55868655-55868674 None:intergenic 25.0%
!! ATTCCTTTTAGATTCAAACT+TGG - chr5_4:55868659-55868678 Msa0858440:intron 25.0%
! TGATAACCAAATGATGAATA+TGG - chr5_4:55868731-55868750 Msa0858440:intron 25.0%
!! TAATAATCCTATGTTTCTGA+TGG - chr5_4:55868796-55868815 Msa0858440:intron 25.0%
!! TTTTAATGGCAATGAGTTTA+AGG + chr5_4:55868828-55868847 None:intergenic 25.0%
! ATAAACCAAAAGATGAACAT+TGG + chr5_4:55869161-55869180 None:intergenic 25.0%
! GATGTACTAAAATCTTAGAA+AGG + chr5_4:55869216-55869235 None:intergenic 25.0%
! AAGTAACAGTTGATTATGAT+TGG - chr5_4:55869245-55869264 Msa0858440:five_prime_UTR 25.0%
TCGGAAAATAGAGAAACTAT+GGG + chr5_4:55867564-55867583 None:intergenic 30.0%
ATCGGAAAATAGAGAAACTA+TGG + chr5_4:55867565-55867584 None:intergenic 30.0%
ATAGTGATCGTGATTGATTA+GGG + chr5_4:55867652-55867671 None:intergenic 30.0%
! ATCTCATCTTGGTAAGTTTT+GGG - chr5_4:55867953-55867972 Msa0858440:intron 30.0%
!!! TTTTGTTTTGGAATGTTTGG+GGG - chr5_4:55868034-55868053 Msa0858440:intron 30.0%
!! GTTTGAATTGTTTGCTTTTG+TGG - chr5_4:55868262-55868281 Msa0858440:intron 30.0%
TGAGTTGTAGGATATTGTTA+TGG - chr5_4:55868300-55868319 Msa0858440:intron 30.0%
TATTCTTAACCACTCACTTT+AGG - chr5_4:55868523-55868542 Msa0858440:intron 30.0%
!!! GTTTTGTTGGCTTATCTTTT+TGG - chr5_4:55868579-55868598 Msa0858440:intron 30.0%
CAACCAAGTTTGAATCTAAA+AGG + chr5_4:55868665-55868684 None:intergenic 30.0%
GACAATCCATATTCATCATT+TGG + chr5_4:55868740-55868759 None:intergenic 30.0%
! TTTTGATGTTGAATGTCTTG+CGG + chr5_4:55868992-55869011 None:intergenic 30.0%
ATAATCATTCAAATGCCCAT+TGG + chr5_4:55869058-55869077 None:intergenic 30.0%
ATAACATAAAACCACATGAC+AGG + chr5_4:55869113-55869132 None:intergenic 30.0%
!!! CATCTTTTGGTTTATTTCTG+TGG - chr5_4:55869166-55869185 Msa0858440:five_prime_UTR 30.0%
TCGGAAAATAGAGAAACTAT+GGG + chr5_4:55867564-55867583 None:intergenic 30.0%
ATCGGAAAATAGAGAAACTA+TGG + chr5_4:55867565-55867584 None:intergenic 30.0%
ATAGTGATCGTGATTGATTA+GGG + chr5_4:55867652-55867671 None:intergenic 30.0%
! ATCTCATCTTGGTAAGTTTT+GGG - chr5_4:55867953-55867972 Msa0858440:intron 30.0%
!!! TTTTGTTTTGGAATGTTTGG+GGG - chr5_4:55868034-55868053 Msa0858440:intron 30.0%
!! GTTTGAATTGTTTGCTTTTG+TGG - chr5_4:55868262-55868281 Msa0858440:intron 30.0%
TGAGTTGTAGGATATTGTTA+TGG - chr5_4:55868300-55868319 Msa0858440:intron 30.0%
TATTCTTAACCACTCACTTT+AGG - chr5_4:55868523-55868542 Msa0858440:intron 30.0%
!!! GTTTTGTTGGCTTATCTTTT+TGG - chr5_4:55868579-55868598 Msa0858440:intron 30.0%
CAACCAAGTTTGAATCTAAA+AGG + chr5_4:55868665-55868684 None:intergenic 30.0%
GACAATCCATATTCATCATT+TGG + chr5_4:55868740-55868759 None:intergenic 30.0%
! TTTTGATGTTGAATGTCTTG+CGG + chr5_4:55868992-55869011 None:intergenic 30.0%
ATAATCATTCAAATGCCCAT+TGG + chr5_4:55869058-55869077 None:intergenic 30.0%
ATAACATAAAACCACATGAC+AGG + chr5_4:55869113-55869132 None:intergenic 30.0%
!!! CATCTTTTGGTTTATTTCTG+TGG - chr5_4:55869166-55869185 Msa0858440:five_prime_UTR 30.0%
! AGGGTTTTCTTTTCTCGAAA+AGG - chr5_4:55867597-55867616 Msa0858440:three_prime_UTR 35.0%
! GGGTTTTCTTTTCTCGAAAA+GGG - chr5_4:55867598-55867617 Msa0858440:three_prime_UTR 35.0%
! GGTTTTCTTTTCTCGAAAAG+GGG - chr5_4:55867599-55867618 Msa0858440:three_prime_UTR 35.0%
! ATTAGGGTTTGGTTGAGAAT+TGG + chr5_4:55867636-55867655 None:intergenic 35.0%
CATAGTGATCGTGATTGATT+AGG + chr5_4:55867653-55867672 None:intergenic 35.0%
!! TACGCTTTTTGATCTCATCT+TGG - chr5_4:55867942-55867961 Msa0858440:intron 35.0%
! GATCTCATCTTGGTAAGTTT+TGG - chr5_4:55867952-55867971 Msa0858440:intron 35.0%
! TCTCATCTTGGTAAGTTTTG+GGG - chr5_4:55867954-55867973 Msa0858440:intron 35.0%
ACACCAGAAAACCCTAATTT+AGG + chr5_4:55868061-55868080 None:intergenic 35.0%
!!! AGGATTAGGGTTTTTGGTTT+TGG - chr5_4:55868132-55868151 Msa0858440:intron 35.0%
!!! GGATTAGGGTTTTTGGTTTT+GGG - chr5_4:55868133-55868152 Msa0858440:intron 35.0%
TTTGGGAATTGATTGAGCTA+TGG - chr5_4:55868150-55868169 Msa0858440:intron 35.0%
! ATATTTTGCCCCAAACTTGA+AGG - chr5_4:55868357-55868376 Msa0858440:intron 35.0%
! CTTTCAAACCTTCAAGTTTG+GGG + chr5_4:55868368-55868387 None:intergenic 35.0%
! CCTTTCAAACCTTCAAGTTT+GGG + chr5_4:55868369-55868388 None:intergenic 35.0%
CCAAACTTGAAGGTTTGAAA+GGG - chr5_4:55868367-55868386 Msa0858440:intron 35.0%
CAAACTTGAAGGTTTGAAAG+GGG - chr5_4:55868368-55868387 Msa0858440:intron 35.0%
GATGTAACCATCAGAAACAT+AGG + chr5_4:55868806-55868825 None:intergenic 35.0%
CAAAAATGATTTCTCTCCAG+AGG - chr5_4:55869007-55869026 Msa0858440:CDS 35.0%
ACTTCTTAGCATGTATGTCA+AGG - chr5_4:55869086-55869105 Msa0858440:CDS 35.0%
! GAACTCCAATGTTCATCTTT+TGG - chr5_4:55869153-55869172 Msa0858440:five_prime_UTR 35.0%
GGATAATGAAGATTCATGAC+CGG + chr5_4:55869195-55869214 None:intergenic 35.0%
ATTGGCTGATGCGTTTAATA+TGG - chr5_4:55869263-55869282 Msa0858440:five_prime_UTR 35.0%
GATGCGTTTAATATGGTACA+AGG - chr5_4:55869270-55869289 Msa0858440:five_prime_UTR 35.0%
! AGGGTTTTCTTTTCTCGAAA+AGG - chr5_4:55867597-55867616 Msa0858440:three_prime_UTR 35.0%
! GGGTTTTCTTTTCTCGAAAA+GGG - chr5_4:55867598-55867617 Msa0858440:three_prime_UTR 35.0%
! GGTTTTCTTTTCTCGAAAAG+GGG - chr5_4:55867599-55867618 Msa0858440:three_prime_UTR 35.0%
! ATTAGGGTTTGGTTGAGAAT+TGG + chr5_4:55867636-55867655 None:intergenic 35.0%
CATAGTGATCGTGATTGATT+AGG + chr5_4:55867653-55867672 None:intergenic 35.0%
!! TACGCTTTTTGATCTCATCT+TGG - chr5_4:55867942-55867961 Msa0858440:intron 35.0%
! GATCTCATCTTGGTAAGTTT+TGG - chr5_4:55867952-55867971 Msa0858440:intron 35.0%
! TCTCATCTTGGTAAGTTTTG+GGG - chr5_4:55867954-55867973 Msa0858440:intron 35.0%
ACACCAGAAAACCCTAATTT+AGG + chr5_4:55868061-55868080 None:intergenic 35.0%
!!! AGGATTAGGGTTTTTGGTTT+TGG - chr5_4:55868132-55868151 Msa0858440:intron 35.0%
!!! GGATTAGGGTTTTTGGTTTT+GGG - chr5_4:55868133-55868152 Msa0858440:intron 35.0%
TTTGGGAATTGATTGAGCTA+TGG - chr5_4:55868150-55868169 Msa0858440:intron 35.0%
! ATATTTTGCCCCAAACTTGA+AGG - chr5_4:55868357-55868376 Msa0858440:intron 35.0%
! CTTTCAAACCTTCAAGTTTG+GGG + chr5_4:55868368-55868387 None:intergenic 35.0%
! CCTTTCAAACCTTCAAGTTT+GGG + chr5_4:55868369-55868388 None:intergenic 35.0%
CCAAACTTGAAGGTTTGAAA+GGG - chr5_4:55868367-55868386 Msa0858440:intron 35.0%
CAAACTTGAAGGTTTGAAAG+GGG - chr5_4:55868368-55868387 Msa0858440:intron 35.0%
GATGTAACCATCAGAAACAT+AGG + chr5_4:55868806-55868825 None:intergenic 35.0%
CAAAAATGATTTCTCTCCAG+AGG - chr5_4:55869007-55869026 Msa0858440:CDS 35.0%
ACTTCTTAGCATGTATGTCA+AGG - chr5_4:55869086-55869105 Msa0858440:CDS 35.0%
! GAACTCCAATGTTCATCTTT+TGG - chr5_4:55869153-55869172 Msa0858440:five_prime_UTR 35.0%
GGATAATGAAGATTCATGAC+CGG + chr5_4:55869195-55869214 None:intergenic 35.0%
ATTGGCTGATGCGTTTAATA+TGG - chr5_4:55869263-55869282 Msa0858440:five_prime_UTR 35.0%
GATGCGTTTAATATGGTACA+AGG - chr5_4:55869270-55869289 Msa0858440:five_prime_UTR 35.0%
! GTGCTACTAGAATGCAATCA+GGG + chr5_4:55867522-55867541 None:intergenic 40.0%
! AGTGCTACTAGAATGCAATC+AGG + chr5_4:55867523-55867542 None:intergenic 40.0%
GATCGTGATTGATTAGGGTT+TGG + chr5_4:55867647-55867666 None:intergenic 40.0%
AAGATCTTGCTCGTAACGTT+GGG + chr5_4:55867808-55867827 None:intergenic 40.0%
ATGTTTGGGGGTCCTAAATT+AGG - chr5_4:55868046-55868065 Msa0858440:intron 40.0%
TGTTTGGGGGTCCTAAATTA+GGG - chr5_4:55868047-55868066 Msa0858440:intron 40.0%
! GGTCCTAAATTAGGGTTTTC+TGG - chr5_4:55868055-55868074 Msa0858440:intron 40.0%
CCCAAACTTGAAGGTTTGAA+AGG - chr5_4:55868366-55868385 Msa0858440:intron 40.0%
! CCCTTTCAAACCTTCAAGTT+TGG + chr5_4:55868370-55868389 None:intergenic 40.0%
AACTAGACACCTAAAGTGAG+TGG + chr5_4:55868535-55868554 None:intergenic 40.0%
! TGGATTGTCATTTCTCACGA+CGG - chr5_4:55868751-55868770 Msa0858440:intron 40.0%
AAGTAGTTAGCAGCCTACAA+AGG + chr5_4:55868894-55868913 None:intergenic 40.0%
CTTGAATATCAAGAGCTTGC+TGG - chr5_4:55868911-55868930 Msa0858440:CDS 40.0%
ACTGTTGCAGACATGATCAA+GGG - chr5_4:55868948-55868967 Msa0858440:CDS 40.0%
AAGTTCGTAGGGAAAACCAA+TGG - chr5_4:55869039-55869058 Msa0858440:CDS 40.0%
AGTTCGTAGGGAAAACCAAT+GGG - chr5_4:55869040-55869059 Msa0858440:CDS 40.0%
!! TGGTTTATTTCTGTGGAGTC+CGG - chr5_4:55869173-55869192 Msa0858440:five_prime_UTR 40.0%
! GTGCTACTAGAATGCAATCA+GGG + chr5_4:55867522-55867541 None:intergenic 40.0%
! AGTGCTACTAGAATGCAATC+AGG + chr5_4:55867523-55867542 None:intergenic 40.0%
GATCGTGATTGATTAGGGTT+TGG + chr5_4:55867647-55867666 None:intergenic 40.0%
AAGATCTTGCTCGTAACGTT+GGG + chr5_4:55867808-55867827 None:intergenic 40.0%
ATGTTTGGGGGTCCTAAATT+AGG - chr5_4:55868046-55868065 Msa0858440:intron 40.0%
TGTTTGGGGGTCCTAAATTA+GGG - chr5_4:55868047-55868066 Msa0858440:intron 40.0%
! GGTCCTAAATTAGGGTTTTC+TGG - chr5_4:55868055-55868074 Msa0858440:intron 40.0%
CCCAAACTTGAAGGTTTGAA+AGG - chr5_4:55868366-55868385 Msa0858440:intron 40.0%
! CCCTTTCAAACCTTCAAGTT+TGG + chr5_4:55868370-55868389 None:intergenic 40.0%
AACTAGACACCTAAAGTGAG+TGG + chr5_4:55868535-55868554 None:intergenic 40.0%
! TGGATTGTCATTTCTCACGA+CGG - chr5_4:55868751-55868770 Msa0858440:intron 40.0%
AAGTAGTTAGCAGCCTACAA+AGG + chr5_4:55868894-55868913 None:intergenic 40.0%
CTTGAATATCAAGAGCTTGC+TGG - chr5_4:55868911-55868930 Msa0858440:CDS 40.0%
ACTGTTGCAGACATGATCAA+GGG - chr5_4:55868948-55868967 Msa0858440:CDS 40.0%
AAGTTCGTAGGGAAAACCAA+TGG - chr5_4:55869039-55869058 Msa0858440:CDS 40.0%
AGTTCGTAGGGAAAACCAAT+GGG - chr5_4:55869040-55869059 Msa0858440:CDS 40.0%
!! TGGTTTATTTCTGTGGAGTC+CGG - chr5_4:55869173-55869192 Msa0858440:five_prime_UTR 40.0%
TAGAGAAACTATGGGCGTGA+GGG + chr5_4:55867556-55867575 None:intergenic 45.0%
ATAGAGAAACTATGGGCGTG+AGG + chr5_4:55867557-55867576 None:intergenic 45.0%
ATCACTCTCAAGAGTTCCGA+TGG - chr5_4:55867688-55867707 Msa0858440:three_prime_UTR 45.0%
AACAGCTTCATCAACCTCGA+AGG + chr5_4:55867719-55867738 None:intergenic 45.0%
!! GGTTGATGAAGCTGTTGCTT+TGG - chr5_4:55867723-55867742 Msa0858440:exon 45.0%
CAAGATCTTGCTCGTAACGT+TGG + chr5_4:55867809-55867828 None:intergenic 45.0%
CAACGTTACGAGCAAGATCT+TGG - chr5_4:55867807-55867826 Msa0858440:CDS 45.0%
TGCTGAAGACAAACCTAACG+AGG - chr5_4:55867873-55867892 Msa0858440:CDS 45.0%
GACTTAAGCTCATCCTCGTT+AGG + chr5_4:55867889-55867908 None:intergenic 45.0%
ACGAGGATGAGCTTAAGTCT+TGG - chr5_4:55867890-55867909 Msa0858440:CDS 45.0%
CGAGGATGAGCTTAAGTCTT+GGG - chr5_4:55867891-55867910 Msa0858440:CDS 45.0%
CTGATCAACCTTCACGAACT+CGG + chr5_4:55867920-55867939 None:intergenic 45.0%
TGATCATGTCTGCAACAGTC+TGG + chr5_4:55868947-55868966 None:intergenic 45.0%
GACTGTTGCAGACATGATCA+AGG - chr5_4:55868947-55868966 Msa0858440:CDS 45.0%
TGATTTCTCTCCAGAGGAAG+AGG - chr5_4:55869013-55869032 Msa0858440:CDS 45.0%
TATGTCAAGGACCTGTCATG+TGG - chr5_4:55869099-55869118 Msa0858440:CDS 45.0%
TAGAGAAACTATGGGCGTGA+GGG + chr5_4:55867556-55867575 None:intergenic 45.0%
ATAGAGAAACTATGGGCGTG+AGG + chr5_4:55867557-55867576 None:intergenic 45.0%
ATCACTCTCAAGAGTTCCGA+TGG - chr5_4:55867688-55867707 Msa0858440:three_prime_UTR 45.0%
AACAGCTTCATCAACCTCGA+AGG + chr5_4:55867719-55867738 None:intergenic 45.0%
!! GGTTGATGAAGCTGTTGCTT+TGG - chr5_4:55867723-55867742 Msa0858440:exon 45.0%
CAAGATCTTGCTCGTAACGT+TGG + chr5_4:55867809-55867828 None:intergenic 45.0%
CAACGTTACGAGCAAGATCT+TGG - chr5_4:55867807-55867826 Msa0858440:CDS 45.0%
TGCTGAAGACAAACCTAACG+AGG - chr5_4:55867873-55867892 Msa0858440:CDS 45.0%
GACTTAAGCTCATCCTCGTT+AGG + chr5_4:55867889-55867908 None:intergenic 45.0%
ACGAGGATGAGCTTAAGTCT+TGG - chr5_4:55867890-55867909 Msa0858440:CDS 45.0%
CGAGGATGAGCTTAAGTCTT+GGG - chr5_4:55867891-55867910 Msa0858440:CDS 45.0%
CTGATCAACCTTCACGAACT+CGG + chr5_4:55867920-55867939 None:intergenic 45.0%
TGATCATGTCTGCAACAGTC+TGG + chr5_4:55868947-55868966 None:intergenic 45.0%
GACTGTTGCAGACATGATCA+AGG - chr5_4:55868947-55868966 Msa0858440:CDS 45.0%
TGATTTCTCTCCAGAGGAAG+AGG - chr5_4:55869013-55869032 Msa0858440:CDS 45.0%
TATGTCAAGGACCTGTCATG+TGG - chr5_4:55869099-55869118 Msa0858440:CDS 45.0%
AGAGAAACTATGGGCGTGAG+GGG + chr5_4:55867555-55867574 None:intergenic 50.0%
TGCTCGTAACGTTGGGAAGA+GGG + chr5_4:55867801-55867820 None:intergenic 50.0%
TTGCTCGTAACGTTGGGAAG+AGG + chr5_4:55867802-55867821 None:intergenic 50.0%
TACGAGCAAGATCTTGGCGA+AGG - chr5_4:55867813-55867832 Msa0858440:CDS 50.0%
TTGGGATTCCGAGTTCGTGA+AGG - chr5_4:55867909-55867928 Msa0858440:intron 50.0%
! CGAGTTCGTGAAGGTTGATC+AGG - chr5_4:55867918-55867937 Msa0858440:intron 50.0%
GATCAAGGGAAAGACACCAG+AGG - chr5_4:55868962-55868981 Msa0858440:CDS 50.0%
AATGTCTTGCGGATCTCCTC+TGG + chr5_4:55868981-55869000 None:intergenic 50.0%
TTTCTCTCCAGAGGAAGAGG+AGG - chr5_4:55869016-55869035 Msa0858440:CDS 50.0%
AGGAAGAGGAGGAAGTTCGT+AGG - chr5_4:55869027-55869046 Msa0858440:CDS 50.0%
GGAAGAGGAGGAAGTTCGTA+GGG - chr5_4:55869028-55869047 Msa0858440:CDS 50.0%
AGAGAAACTATGGGCGTGAG+GGG + chr5_4:55867555-55867574 None:intergenic 50.0%
TGCTCGTAACGTTGGGAAGA+GGG + chr5_4:55867801-55867820 None:intergenic 50.0%
TTGCTCGTAACGTTGGGAAG+AGG + chr5_4:55867802-55867821 None:intergenic 50.0%
TACGAGCAAGATCTTGGCGA+AGG - chr5_4:55867813-55867832 Msa0858440:CDS 50.0%
TTGGGATTCCGAGTTCGTGA+AGG - chr5_4:55867909-55867928 Msa0858440:intron 50.0%
! CGAGTTCGTGAAGGTTGATC+AGG - chr5_4:55867918-55867937 Msa0858440:intron 50.0%
GATCAAGGGAAAGACACCAG+AGG - chr5_4:55868962-55868981 Msa0858440:CDS 50.0%
AATGTCTTGCGGATCTCCTC+TGG + chr5_4:55868981-55869000 None:intergenic 50.0%
TTTCTCTCCAGAGGAAGAGG+AGG - chr5_4:55869016-55869035 Msa0858440:CDS 50.0%
AGGAAGAGGAGGAAGTTCGT+AGG - chr5_4:55869027-55869046 Msa0858440:CDS 50.0%
GGAAGAGGAGGAAGTTCGTA+GGG - chr5_4:55869028-55869047 Msa0858440:CDS 50.0%
AATCAGGGTCTCCTACGTGG+AGG + chr5_4:55867507-55867526 None:intergenic 55.0%
TGCAATCAGGGTCTCCTACG+TGG + chr5_4:55867510-55867529 None:intergenic 55.0%
AACCTCGAAGGTCTCGCCAT+CGG + chr5_4:55867707-55867726 None:intergenic 55.0%
! GAAGACGATTGCGCTGACAG+TGG - chr5_4:55867772-55867791 Msa0858440:CDS 55.0%
CATGTCTGCAACAGTCTGGC+AGG + chr5_4:55868943-55868962 None:intergenic 55.0%
CGAACTTCCTCCTCTTCCTC+TGG + chr5_4:55869026-55869045 None:intergenic 55.0%
AATCAGGGTCTCCTACGTGG+AGG + chr5_4:55867507-55867526 None:intergenic 55.0%
TGCAATCAGGGTCTCCTACG+TGG + chr5_4:55867510-55867529 None:intergenic 55.0%
AACCTCGAAGGTCTCGCCAT+CGG + chr5_4:55867707-55867726 None:intergenic 55.0%
! GAAGACGATTGCGCTGACAG+TGG - chr5_4:55867772-55867791 Msa0858440:CDS 55.0%
CATGTCTGCAACAGTCTGGC+AGG + chr5_4:55868943-55868962 None:intergenic 55.0%
CGAACTTCCTCCTCTTCCTC+TGG + chr5_4:55869026-55869045 None:intergenic 55.0%
TTCCGATGGCGAGACCTTCG+AGG - chr5_4:55867702-55867721 Msa0858440:three_prime_UTR 60.0%
TTCCGATGGCGAGACCTTCG+AGG - chr5_4:55867702-55867721 Msa0858440:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 55867500 55869311 55867500 ID=Msa0858440;Name=Msa0858440
chr5_4 mRNA 55867500 55869311 55867500 ID=Msa0858440-mRNA-1;Parent=Msa0858440;Name=Msa0858440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=170|0|0.66|0.66|1|1|3|238|178
chr5_4 exon 55867500 55867911 55867500 ID=Msa0858440-mRNA-1:exon:17102;Parent=Msa0858440-mRNA-1
chr5_4 exon 55868433 55868501 55868433 ID=Msa0858440-mRNA-1:exon:17101;Parent=Msa0858440-mRNA-1
chr5_4 exon 55868848 55869311 55868848 ID=Msa0858440-mRNA-1:exon:17100;Parent=Msa0858440-mRNA-1
chr5_4 five_prime_UTR 55869142 55869311 55869142 ID=Msa0858440-mRNA-1:five_prime_utr;Parent=Msa0858440-mRNA-1
chr5_4 CDS 55868848 55869141 55868848 ID=Msa0858440-mRNA-1:cds;Parent=Msa0858440-mRNA-1
chr5_4 CDS 55868433 55868501 55868433 ID=Msa0858440-mRNA-1:cds;Parent=Msa0858440-mRNA-1
chr5_4 CDS 55867738 55867911 55867738 ID=Msa0858440-mRNA-1:cds;Parent=Msa0858440-mRNA-1
chr5_4 three_prime_UTR 55867500 55867737 55867500 ID=Msa0858440-mRNA-1:three_prime_utr;Parent=Msa0858440-mRNA-1
Gene Sequence

>Msa0858440

ATGTCTTCAACAAGAAAGATCACTCTCAAGAGTTCCGATGGCGAGACCTTCGAGGTTGATGAAGCTGTTGCTTTGGAATCTCAGACGATCAAGCATATGATCGAAGACGATTGCGCTGACAGTGGAATCCCTCTTCCCAACGTTACGAGCAAGATCTTGGCGAAGGTGATTGAGTATTGCAAGAAGCATGTTGACGCTGCTGCTGCTGAAGACAAACCTAACGAGGATGAGCTTAAGTCTTGGGATTCCGAGTTCGTGAAGGTTGATCAGGCTACGCTTTTTGATCTCATCTTGGATATTGTTATGGTTGATGCTGCTATTGTTAAATCCTTTGAAAATATATATTTTGCCCCAAACTTGAAGGCTGCTAACTACTTGAATATCAAGAGCTTGCTGGATCTTACCTGCCAGACTGTTGCAGACATGATCAAGGGAAAGACACCAGAGGAGATCCGCAAGACATTCAACATCAAAAATGATTTCTCTCCAGAGGAAGAGGAGGAAGTTCGTAGGGAAAACCAATGGGCATTTGAATGA

Protein sequence

>Msa0858440

MSSTRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVDAAAAEDKPNEDELKSWDSEFVKVDQATLFDLILDIVMVDAAIVKSFENIYFAPNLKAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPEEEEEVRRENQWAFE*