Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182370 | XP_013470153.1 | 85.564 | 381 | 7 | 1 | 1 | 333 | 1 | 381 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182370 | A0A072VR82 | 85.564 | 381 | 7 | 1 | 1 | 333 | 1 | 381 | 0.0 | 655 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0182370 | Msa1404520 | 0.871687 | 5.654217e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182370 | MtrunA17_Chr1g0209221 | 85.564 | 381 | 7 | 1 | 1 | 333 | 1 | 381 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182370 | AT2G01220.2 | 59.896 | 384 | 103 | 2 | 1 | 333 | 1 | 384 | 1.52e-165 | 467 |
| Msa0182370 | AT2G01220.1 | 59.791 | 383 | 104 | 2 | 1 | 333 | 1 | 383 | 1.11e-164 | 464 |
| Msa0182370 | AT3G27610.1 | 55.065 | 385 | 121 | 3 | 1 | 333 | 1 | 385 | 2.16e-151 | 431 |
| Msa0182370 | AT3G27610.3 | 61.029 | 272 | 102 | 2 | 66 | 333 | 3 | 274 | 2.80e-123 | 355 |
| Msa0182370 | AT3G27610.5 | 61.029 | 272 | 102 | 2 | 66 | 333 | 3 | 274 | 2.80e-123 | 355 |
| Msa0182370 | AT3G27610.8 | 61.029 | 272 | 102 | 2 | 66 | 333 | 3 | 274 | 2.80e-123 | 355 |
| Msa0182370 | AT3G27610.2 | 60.886 | 271 | 102 | 2 | 67 | 333 | 43 | 313 | 5.95e-122 | 353 |
| Msa0182370 | AT3G27610.4 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
| Msa0182370 | AT3G27610.7 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
| Msa0182370 | AT3G27610.6 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
| Msa0182370 | AT3G27610.9 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
Find 94 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCGGAGCTTCTCAGGTTC+TGG | 0.181157 | 1_4:+70842298 | Msa0182370:CDS |
| TTAACTATACCACTTCTAAA+TGG | 0.256565 | 1_4:-70845195 | None:intergenic |
| GAATGTAGATGGTGCATTTA+AGG | 0.263029 | 1_4:+70848839 | Msa0182370:CDS |
| CTCTTGTTGGGATTTGTAAC+TGG | 0.295115 | 1_4:+70849367 | Msa0182370:three_prime_UTR |
| AATGTCTCTGATTCAGTTAC+TGG | 0.301982 | 1_4:+70842385 | Msa0182370:CDS |
| ATCAGAGACATTCTAGAATA+AGG | 0.322427 | 1_4:-70842374 | None:intergenic |
| AATACTCATGCACAAATATA+AGG | 0.325904 | 1_4:+70849260 | Msa0182370:three_prime_UTR |
| AAGAAGGCTGAACTATTTCC+TGG | 0.340874 | 1_4:+70847506 | Msa0182370:CDS |
| GGCGGAGCTTCTCAGGTTCT+GGG | 0.342045 | 1_4:+70842299 | Msa0182370:CDS |
| GGTTTGTTGCTATCTGTTCC+CGG | 0.354909 | 1_4:+70842320 | Msa0182370:CDS |
| TAGTCCCCATCATAGTATTT+AGG | 0.363349 | 1_4:-70848750 | None:intergenic |
| AATTAAATATACACTCTTGT+TGG | 0.367448 | 1_4:+70849354 | Msa0182370:three_prime_UTR |
| TGCAGACAAACCTCCATTAT+CGG | 0.371975 | 1_4:+70846820 | Msa0182370:CDS |
| ATGCAAGCTTCCGTCATTCT+CGG | 0.372587 | 1_4:-70842218 | None:intergenic |
| GGTTCCTTCCAATGATATTC+CGG | 0.387200 | 1_4:+70845071 | Msa0182370:CDS |
| TTGATCTGAGACACCGATAA+TGG | 0.391288 | 1_4:-70846833 | None:intergenic |
| GAGTGTATATTTAATTCAAT+TGG | 0.400636 | 1_4:-70849347 | None:intergenic |
| ATTAAATATACACTCTTGTT+GGG | 0.403116 | 1_4:+70849355 | Msa0182370:three_prime_UTR |
| CTTGGTGGTTGTAAAGAAAC+AGG | 0.410949 | 1_4:+70848792 | Msa0182370:CDS |
| TGCAAGCTTCCGTCATTCTC+GGG | 0.416275 | 1_4:-70842217 | None:intergenic |
| TCTTGCTGGCGGAGCTTCTC+AGG | 0.417825 | 1_4:+70842292 | Msa0182370:CDS |
| GAGTTAGAGCAACTTATAAA+TGG | 0.417856 | 1_4:+70845150 | Msa0182370:CDS |
| TCTTTCAATCCTTTACATGA+TGG | 0.429935 | 1_4:+70845334 | Msa0182370:CDS |
| CAAGGACAGCTGATCGACTT+TGG | 0.438388 | 1_4:+70843772 | Msa0182370:CDS |
| CTATGCAGCATTTGCGGTGA+TGG | 0.440527 | 1_4:+70846767 | Msa0182370:intron |
| CTTTCAATCCTTTACATGAT+GGG | 0.442953 | 1_4:+70845335 | Msa0182370:CDS |
| ACTCAACTCCGGAATATCAT+TGG | 0.445183 | 1_4:-70845079 | None:intergenic |
| CTGATCGACTTTGGATATCA+AGG | 0.446712 | 1_4:+70843781 | Msa0182370:CDS |
| GTATTGCTTCTACGGCGGTT+CGG | 0.459716 | 1_4:-70842241 | None:intergenic |
| GTGGCTGGTCGGAATGTAGA+TGG | 0.465218 | 1_4:+70848828 | Msa0182370:CDS |
| CAAACCGTTCTCTATCTTGC+TGG | 0.471519 | 1_4:+70842278 | Msa0182370:CDS |
| TTGCAGCCTAAATACTATGA+TGG | 0.482577 | 1_4:+70848744 | Msa0182370:intron |
| TGCAGCCTAAATACTATGAT+GGG | 0.483015 | 1_4:+70848745 | Msa0182370:intron |
| GCGGAACTGTTCAGCTGGAA+TGG | 0.483659 | 1_4:-70848994 | None:intergenic |
| GCACATCTATGCAGCATTTG+CGG | 0.486089 | 1_4:+70846761 | Msa0182370:intron |
| AACAAGATGCTGAAGATACT+TGG | 0.487034 | 1_4:+70848774 | Msa0182370:CDS |
| TCCTCTTTGAAACTATGAAA+AGG | 0.490320 | 1_4:-70849213 | None:intergenic |
| AGATAGAGAACGGTTTGGTA+TGG | 0.507910 | 1_4:-70842272 | None:intergenic |
| TCTGATTCAGTTACTGGGCA+AGG | 0.510772 | 1_4:+70842391 | Msa0182370:CDS |
| AACGGCTTCAAGAACAGTAT+TGG | 0.513679 | 1_4:-70842348 | None:intergenic |
| GGATGCACCTTCCTTGTGGC+TGG | 0.519870 | 1_4:+70848813 | Msa0182370:CDS |
| TCCATGCGGAACTGTTCAGC+TGG | 0.520712 | 1_4:-70848999 | None:intergenic |
| CAATAAAAGTTACCACAAGT+TGG | 0.521697 | 1_4:-70849433 | None:intergenic |
| AGAGGAGTGTATTGCTTCTA+CGG | 0.529778 | 1_4:-70842249 | None:intergenic |
| ACAAATCCGCAATATAAAAG+TGG | 0.530865 | 1_4:+70849111 | Msa0182370:three_prime_UTR |
| AAGAACAGTATTGGAAGCAC+CGG | 0.533288 | 1_4:-70842339 | None:intergenic |
| GAAAGGAAAATAATACTGCC+TGG | 0.537291 | 1_4:+70845310 | Msa0182370:CDS |
| AAGATTTATCCATTTAGAAG+TGG | 0.537829 | 1_4:+70845186 | Msa0182370:CDS |
| CAAAGAGGAGTCGTGTGTGT+TGG | 0.538913 | 1_4:+70849227 | Msa0182370:three_prime_UTR |
| CAGCAAGATAGAGAACGGTT+TGG | 0.539013 | 1_4:-70842277 | None:intergenic |
| ATTCTCGGGTTAATTGTAAG+TGG | 0.540737 | 1_4:-70842203 | None:intergenic |
| TGCGGATTTGTGCTTCATGA+AGG | 0.542304 | 1_4:-70849099 | None:intergenic |
| ATCAAGGGTGACCTTGACTA+AGG | 0.543834 | 1_4:+70843797 | Msa0182370:CDS |
| TGATGGGCATATCAAGCTCA+TGG | 0.544631 | 1_4:+70845351 | Msa0182370:CDS |
| AATATACTAAAATTCAAGAA+TGG | 0.545658 | 1_4:-70849289 | None:intergenic |
| TTCTCGGGTTAATTGTAAGT+GGG | 0.554404 | 1_4:-70842202 | None:intergenic |
| TTGATATGCCCATCATGTAA+AGG | 0.555036 | 1_4:-70845343 | None:intergenic |
| TATGCAGCATTTGCGGTGAT+GGG | 0.555470 | 1_4:+70846768 | Msa0182370:intron |
| GCACCTTCCTTGTGGCTGGT+CGG | 0.555628 | 1_4:+70848817 | Msa0182370:CDS |
| GTACTCGAGAAGAAGAAGAC+AGG | 0.555650 | 1_4:+70844766 | Msa0182370:CDS |
| GGCTATTGCAAATGCATGCA+AGG | 0.557504 | 1_4:+70845050 | Msa0182370:intron |
| TTTCAGAGATACCAGCAGAA+AGG | 0.561633 | 1_4:+70845293 | Msa0182370:intron |
| GTTCGATGAACATAAAACCT+TGG | 0.562493 | 1_4:-70849187 | None:intergenic |
| TACACACCTTGAGCAAAAGA+TGG | 0.582043 | 1_4:-70844797 | None:intergenic |
| TGTTGACTACAAAACTGAGA+TGG | 0.583727 | 1_4:-70842508 | None:intergenic |
| TGTAAAGGATTGAAAGAACC+AGG | 0.585182 | 1_4:-70845328 | None:intergenic |
| CCAATTACAAAAGCACTGCC+AGG | 0.591748 | 1_4:-70847524 | None:intergenic |
| TACAATTAACCCGAGAATGA+CGG | 0.594198 | 1_4:+70842208 | Msa0182370:exon |
| ATGTCTCTGATTCAGTTACT+GGG | 0.600917 | 1_4:+70842386 | Msa0182370:CDS |
| ACCGTTCTCTATCTTGCTGG+CGG | 0.601927 | 1_4:+70842281 | Msa0182370:CDS |
| AGCTCATGGAAGTTGCAACC+CGG | 0.605279 | 1_4:+70845365 | Msa0182370:CDS |
| GAGAACGGTTTGGTATGGAG+AGG | 0.609234 | 1_4:-70842267 | None:intergenic |
| AACAGGATGCACCTTCCTTG+TGG | 0.612787 | 1_4:+70848809 | Msa0182370:CDS |
| ACATCTGATTCACTCAACTC+CGG | 0.616929 | 1_4:-70845090 | None:intergenic |
| TCCAGCTGAACAGTTCCGCA+TGG | 0.617440 | 1_4:+70848998 | Msa0182370:CDS |
| AACTCCGGAATATCATTGGA+AGG | 0.620571 | 1_4:-70845075 | None:intergenic |
| TGATCGACTTTGGATATCAA+GGG | 0.621563 | 1_4:+70843782 | Msa0182370:CDS |
| TGGGATTTGTAACTGGTGTG+TGG | 0.622560 | 1_4:+70849374 | Msa0182370:three_prime_UTR |
| ATCTGAGACACCGATAATGG+AGG | 0.627893 | 1_4:-70846830 | None:intergenic |
| ATTCCGACCAGCCACAAGGA+AGG | 0.629562 | 1_4:-70848820 | None:intergenic |
| AGATAACAGTACCTTAGTCA+AGG | 0.631491 | 1_4:-70843808 | None:intergenic |
| TCCGCCAGCAAGATAGAGAA+CGG | 0.634589 | 1_4:-70842282 | None:intergenic |
| AAACGACATAGTAATGTCGA+TGG | 0.650992 | 1_4:-70842170 | None:intergenic |
| GGAGTGTATTGCTTCTACGG+CGG | 0.655091 | 1_4:-70842246 | None:intergenic |
| TACTCGAGAAGAAGAAGACA+GGG | 0.658022 | 1_4:+70844767 | Msa0182370:CDS |
| TTGGTCTGGTTGCCAACTTG+TGG | 0.659440 | 1_4:+70849421 | Msa0182370:three_prime_UTR |
| CTACATTCCGACCAGCCACA+AGG | 0.664799 | 1_4:-70848824 | None:intergenic |
| AGAACAGTATTGGAAGCACC+GGG | 0.667991 | 1_4:-70842338 | None:intergenic |
| ACCGCAGATAGTTCAAAACA+AGG | 0.670657 | 1_4:-70846794 | None:intergenic |
| CATTCTAGAATAAGGAACAA+CGG | 0.672244 | 1_4:-70842366 | None:intergenic |
| GCAGCCTAAATACTATGATG+GGG | 0.673324 | 1_4:+70848746 | Msa0182370:intron |
| AAGATGCTGAAGATACTTGG+TGG | 0.689804 | 1_4:+70848777 | Msa0182370:CDS |
| CAGTAGAGGATATATCCATG+CGG | 0.761286 | 1_4:-70849013 | None:intergenic |
| TTGGTGCTGACACAGCAGTG+AGG | 0.763503 | 1_4:+70847543 | Msa0182370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTACATTTCTTAAAAA+TGG | + | chr1_4:70842828-70842847 | Msa0182370:intron | 10.0% |
| !!! | TTTGCTAAATATTTTAATTT+AGG | + | chr1_4:70844737-70844756 | Msa0182370:intron | 10.0% |
| !!! | TTGCTAAATATTTTAATTTA+GGG | + | chr1_4:70844738-70844757 | Msa0182370:intron | 10.0% |
| !!! | ATTGATAATTTTTTATTCTT+TGG | + | chr1_4:70845270-70845289 | Msa0182370:intron | 10.0% |
| !! | ATGATAAAAAACAAAAACAA+AGG | - | chr1_4:70842464-70842483 | None:intergenic | 15.0% |
| !! | TATAAAATTAGCGTATATAT+AGG | + | chr1_4:70842655-70842674 | Msa0182370:intron | 15.0% |
| !!! | TTTATATTTTATAATCCAAG+TGG | - | chr1_4:70843200-70843219 | None:intergenic | 15.0% |
| !! | AAAAGTAAATAAATTGGAAA+GGG | - | chr1_4:70843981-70844000 | None:intergenic | 15.0% |
| !!! | TGCTAAATATTTTAATTTAG+GGG | + | chr1_4:70844739-70844758 | Msa0182370:intron | 15.0% |
| !! | ATTTAAACAAATATGAAGAA+AGG | - | chr1_4:70844982-70845001 | None:intergenic | 15.0% |
| !!! | TGTTCTTTTTAATCTTTAAA+TGG | + | chr1_4:70845576-70845595 | Msa0182370:intron | 15.0% |
| !!! | GTTCTTTTTAATCTTTAAAT+GGG | + | chr1_4:70845577-70845596 | Msa0182370:intron | 15.0% |
| !! | TATAATAAGAAAAAAAGAGA+AGG | - | chr1_4:70845953-70845972 | None:intergenic | 15.0% |
| !! | TTGAATAAAACCTATAAAAA+AGG | + | chr1_4:70846248-70846267 | Msa0182370:intron | 15.0% |
| !! | TATAACATAAATGATGAAAT+CGG | + | chr1_4:70846351-70846370 | Msa0182370:intron | 15.0% |
| !!! | GATAACTAATATTAACATTT+TGG | - | chr1_4:70846445-70846464 | None:intergenic | 15.0% |
| !! | AAAGAAATAACTTATCATAT+AGG | + | chr1_4:70846486-70846505 | Msa0182370:intron | 15.0% |
| !! | AAGAAATAACTTATCATATA+GGG | + | chr1_4:70846487-70846506 | Msa0182370:intron | 15.0% |
| !! | GATATTCAAATATCATTAAT+TGG | + | chr1_4:70846566-70846585 | Msa0182370:intron | 15.0% |
| !! | ACAAAACAAAAAAATCATAT+GGG | - | chr1_4:70847724-70847743 | None:intergenic | 15.0% |
| !! | AACAAAACAAAAAAATCATA+TGG | - | chr1_4:70847725-70847744 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTTTTGTTTTTG+TGG | + | chr1_4:70847729-70847748 | Msa0182370:intron | 15.0% |
| !! | GTTTAATTATATTCCTAAAA+TGG | + | chr1_4:70847874-70847893 | Msa0182370:intron | 15.0% |
| !!! | TTATTTTTCAAATGTTATTG+AGG | + | chr1_4:70848903-70848922 | Msa0182370:intron | 15.0% |
| !! | AATATACTAAAATTCAAGAA+TGG | - | chr1_4:70849292-70849311 | None:intergenic | 15.0% |
| !! | TTTCAAAGGAAAAAAAAAAT+TGG | + | chr1_4:70849402-70849421 | Msa0182370:three_prime_UTR | 15.0% |
| !!! | TTTTGTTTTTTATCATTCGT+TGG | + | chr1_4:70842468-70842487 | Msa0182370:intron | 20.0% |
| !!! | ATACGCTAATTTTATAACAA+AGG | - | chr1_4:70842651-70842670 | None:intergenic | 20.0% |
| !! | AAATAAGCTGAAATTGAATA+AGG | - | chr1_4:70842867-70842886 | None:intergenic | 20.0% |
| !! | TAAACAGAAAAATTACTTTG+AGG | - | chr1_4:70842987-70843006 | None:intergenic | 20.0% |
| !!! | CAAAGTAATTTTTCTGTTTA+AGG | + | chr1_4:70842987-70843006 | Msa0182370:intron | 20.0% |
| !!! | TTTTGTAGATCAATTTTTGT+TGG | + | chr1_4:70843119-70843138 | Msa0182370:intron | 20.0% |
| !! | AATATAAAAACTTGTGTTTC+AGG | + | chr1_4:70843212-70843231 | Msa0182370:intron | 20.0% |
| !! | ATGATTACTAAAACAATTTG+AGG | - | chr1_4:70843317-70843336 | None:intergenic | 20.0% |
| !!! | GAATGTATATTTTTCCTAAA+TGG | + | chr1_4:70843445-70843464 | Msa0182370:intron | 20.0% |
| !! | TTAAACAAAAATAAATCCAG+AGG | - | chr1_4:70843581-70843600 | None:intergenic | 20.0% |
| !! | TTAATTCAAATTCATGACTT+TGG | + | chr1_4:70843597-70843616 | Msa0182370:intron | 20.0% |
| !!! | GTTTGTTGTTCAAATAAAAA+AGG | - | chr1_4:70843953-70843972 | None:intergenic | 20.0% |
| !! | CAAAAGTAAATAAATTGGAA+AGG | - | chr1_4:70843982-70844001 | None:intergenic | 20.0% |
| !!! | CTTTCCAATTTATTTACTTT+TGG | + | chr1_4:70843980-70843999 | Msa0182370:intron | 20.0% |
| !! | GTTTCCAAAAGTAAATAAAT+TGG | - | chr1_4:70843987-70844006 | None:intergenic | 20.0% |
| !! | TAACATCAGATAGAAAATTA+CGG | + | chr1_4:70844158-70844177 | Msa0182370:intron | 20.0% |
| !! | AAATATTCATTATGTTTGTG+TGG | - | chr1_4:70844701-70844720 | None:intergenic | 20.0% |
| !! | TCTAATGCATAATCTTATAA+AGG | - | chr1_4:70844900-70844919 | None:intergenic | 20.0% |
| !!! | AAATTGTTTTTCACATTCAT+CGG | - | chr1_4:70845118-70845137 | None:intergenic | 20.0% |
| !! | TGAAATTAACATGTGTAAAA+CGG | + | chr1_4:70845880-70845899 | Msa0182370:intron | 20.0% |
| !! | ATTATATGTGAAAACTACAA+AGG | + | chr1_4:70845967-70845986 | Msa0182370:intron | 20.0% |
| !! | TTATATGTGAAAACTACAAA+GGG | + | chr1_4:70845968-70845987 | Msa0182370:intron | 20.0% |
| !!! | GGTTTTATTCAATGAAATTT+GGG | - | chr1_4:70846240-70846259 | None:intergenic | 20.0% |
| !!! | AGGTTTTATTCAATGAAATT+TGG | - | chr1_4:70846241-70846260 | None:intergenic | 20.0% |
| !!! | GTTGACATTTTATAACATAA+AGG | + | chr1_4:70846279-70846298 | Msa0182370:intron | 20.0% |
| !! | TCATCATTTATGTTATAATG+AGG | - | chr1_4:70846348-70846367 | None:intergenic | 20.0% |
| !! | ATAACATAAATGATGAAATC+GGG | + | chr1_4:70846352-70846371 | Msa0182370:intron | 20.0% |
| !! | GTTACCTAAAATTAAGTTAA+AGG | + | chr1_4:70846401-70846420 | Msa0182370:intron | 20.0% |
| !!! | TAGTCCTTTAACTTAATTTT+AGG | - | chr1_4:70846408-70846427 | None:intergenic | 20.0% |
| !!! | TCTCTTTTGAAAGTATAATT+AGG | + | chr1_4:70846657-70846676 | Msa0182370:intron | 20.0% |
| !!! | TCTGTTATACTATTTTATGA+AGG | + | chr1_4:70846923-70846942 | Msa0182370:intron | 20.0% |
| !!! | TTCTATTTTTATGCTTAACA+GGG | + | chr1_4:70846955-70846974 | Msa0182370:intron | 20.0% |
| !! | TGTACCATATATTATGTAAT+TGG | + | chr1_4:70846995-70847014 | Msa0182370:intron | 20.0% |
| !! | ATTGCCAATTACATAATATA+TGG | - | chr1_4:70847002-70847021 | None:intergenic | 20.0% |
| !!! | AACAATCAAGTATTGAAAAA+TGG | - | chr1_4:70847637-70847656 | None:intergenic | 20.0% |
| !! | CAATTATGTTTAACAAAAGT+CGG | - | chr1_4:70847901-70847920 | None:intergenic | 20.0% |
| !!! | GAAAAGATCAATTCTAATTT+TGG | + | chr1_4:70848875-70848894 | Msa0182370:intron | 20.0% |
| !!! | GTGGGATTTAAATATTTTTA+TGG | + | chr1_4:70849051-70849070 | Msa0182370:exon | 20.0% |
| !!! | TTAAATATTTTTATGGCTGA+AGG | + | chr1_4:70849058-70849077 | Msa0182370:exon | 20.0% |
| !! | GAGTGTATATTTAATTCAAT+TGG | - | chr1_4:70849350-70849369 | None:intergenic | 20.0% |
| !! | AATTAAATATACACTCTTGT+TGG | + | chr1_4:70849354-70849373 | Msa0182370:three_prime_UTR | 20.0% |
| !! | ATTAAATATACACTCTTGTT+GGG | + | chr1_4:70849355-70849374 | Msa0182370:three_prime_UTR | 20.0% |
| ! | TGATGAAATTGAAGATGAAA+AGG | - | chr1_4:70842423-70842442 | None:intergenic | 25.0% |
| ! | ACAAAAACAAAGGTAAAAGT+GGG | - | chr1_4:70842454-70842473 | None:intergenic | 25.0% |
| ! | AACAAAAACAAAGGTAAAAG+TGG | - | chr1_4:70842455-70842474 | None:intergenic | 25.0% |
| !!! | TTATCATTCGTTGGTTTTTT+TGG | + | chr1_4:70842477-70842496 | Msa0182370:intron | 25.0% |
| !!! | TGCATTTTTTGTTGTTGATT+AGG | + | chr1_4:70842727-70842746 | Msa0182370:intron | 25.0% |
| ! | TCAATTTCAGCTTATTTGTA+AGG | + | chr1_4:70842870-70842889 | Msa0182370:intron | 25.0% |
| ! | ACGACTGTAATTAGTTAATA+AGG | + | chr1_4:70843291-70843310 | Msa0182370:intron | 25.0% |
| ! | AGCAAATAATCAATAACAAG+AGG | - | chr1_4:70843412-70843431 | None:intergenic | 25.0% |
| ! | TAGGAAAAATATACATTCAC+AGG | - | chr1_4:70843443-70843462 | None:intergenic | 25.0% |
| ! | TTCACCAAAAATCATATATG+GGG | - | chr1_4:70843699-70843718 | None:intergenic | 25.0% |
| ! | CTTCACCAAAAATCATATAT+GGG | - | chr1_4:70843700-70843719 | None:intergenic | 25.0% |
| ! | TCTTCACCAAAAATCATATA+TGG | - | chr1_4:70843701-70843720 | None:intergenic | 25.0% |
| !! | GTAGATTTTATATGTCAACA+AGG | + | chr1_4:70843754-70843773 | Msa0182370:intron | 25.0% |
| ! | TTAAGAAAGCTTACAATCAT+CGG | + | chr1_4:70844115-70844134 | Msa0182370:intron | 25.0% |
| !! | ATATCCTCACATTTCATTTT+TGG | - | chr1_4:70844307-70844326 | None:intergenic | 25.0% |
| ! | GAACAATAAAATGGAAGATT+TGG | + | chr1_4:70844517-70844536 | Msa0182370:intron | 25.0% |
| ! | TATAGAACTACTTAATCAGT+AGG | - | chr1_4:70844586-70844605 | None:intergenic | 25.0% |
| !! | CTGATTAAGTAGTTCTATAA+AGG | + | chr1_4:70844587-70844606 | Msa0182370:intron | 25.0% |
| !! | CCAGTTATCTTTTACAAATA+CGG | - | chr1_4:70844649-70844668 | None:intergenic | 25.0% |
| ! | CGTATTTGTAAAAGATAACT+GGG | + | chr1_4:70844647-70844666 | Msa0182370:intron | 25.0% |
| !! | TATTCCTGATCTCATTTTAT+GGG | - | chr1_4:70844934-70844953 | None:intergenic | 25.0% |
| !! | ATATTCCTGATCTCATTTTA+TGG | - | chr1_4:70844935-70844954 | None:intergenic | 25.0% |
| ! | AAAATGAGATCAGGAATATT+TGG | + | chr1_4:70844936-70844955 | Msa0182370:intron | 25.0% |
| ! | AAGATTTATCCATTTAGAAG+TGG | + | chr1_4:70845186-70845205 | Msa0182370:CDS | 25.0% |
| ! | TTAACTATACCACTTCTAAA+TGG | - | chr1_4:70845198-70845217 | None:intergenic | 25.0% |
| !!! | ATAATATTGTTTCTGCACAA+AGG | - | chr1_4:70845222-70845241 | None:intergenic | 25.0% |
| ! | CTCTAATGTCATAATGAAAT+TGG | - | chr1_4:70845750-70845769 | None:intergenic | 25.0% |
| ! | CAATTTCATTATGACATTAG+AGG | + | chr1_4:70845748-70845767 | Msa0182370:intron | 25.0% |
| ! | TAATTAATATAACCGTGTCT+TGG | + | chr1_4:70845772-70845791 | Msa0182370:intron | 25.0% |
| !! | TCTAACAATCACTCTTTTAT+TGG | + | chr1_4:70845856-70845875 | Msa0182370:intron | 25.0% |
| !! | CTAACAATCACTCTTTTATT+GGG | + | chr1_4:70845857-70845876 | Msa0182370:intron | 25.0% |
| ! | GAAATTAACATGTGTAAAAC+GGG | + | chr1_4:70845881-70845900 | Msa0182370:intron | 25.0% |
| ! | GCTATTTACTGAAAAATGTT+AGG | + | chr1_4:70846016-70846035 | Msa0182370:intron | 25.0% |
| ! | ATAACATCAAGGATTAAATC+AGG | - | chr1_4:70846106-70846125 | None:intergenic | 25.0% |
| ! | GTTACGTAATAATAACATCA+AGG | - | chr1_4:70846117-70846136 | None:intergenic | 25.0% |
| ! | TGTTTGTATGATGAAGATTT+GGG | - | chr1_4:70846211-70846230 | None:intergenic | 25.0% |
| ! | ATGTTTGTATGATGAAGATT+TGG | - | chr1_4:70846212-70846231 | None:intergenic | 25.0% |
| !!! | ACACTGATATCCTTTTTTAT+AGG | - | chr1_4:70846261-70846280 | None:intergenic | 25.0% |
| ! | GCGAAAAAAAAAGAAGATAA+AGG | + | chr1_4:70846310-70846329 | Msa0182370:intron | 25.0% |
| ! | TCATATAGGGCTAATAATAA+AGG | + | chr1_4:70846500-70846519 | Msa0182370:intron | 25.0% |
| ! | ATCAGTTATATGTATGATGA+TGG | + | chr1_4:70846680-70846699 | Msa0182370:intron | 25.0% |
| !! | GTTATACTATTTTATGAAGG+AGG | + | chr1_4:70846926-70846945 | Msa0182370:intron | 25.0% |
| ! | TAAGCATAAAAATAGAAGCA+GGG | - | chr1_4:70846952-70846971 | None:intergenic | 25.0% |
| ! | TTAAGCATAAAAATAGAAGC+AGG | - | chr1_4:70846953-70846972 | None:intergenic | 25.0% |
| !!! | CTTCTATTTTTATGCTTAAC+AGG | + | chr1_4:70846954-70846973 | Msa0182370:intron | 25.0% |
| ! | AATATGTTATAGTGAAGAGT+AGG | + | chr1_4:70847103-70847122 | Msa0182370:intron | 25.0% |
| ! | AGATTCAGTTAGATAAATAC+AGG | + | chr1_4:70847176-70847195 | Msa0182370:intron | 25.0% |
| ! | GATTCAGTTAGATAAATACA+GGG | + | chr1_4:70847177-70847196 | Msa0182370:intron | 25.0% |
| ! | AGAATGAACAAATCTAAACA+GGG | - | chr1_4:70847304-70847323 | None:intergenic | 25.0% |
| ! | TAGAATGAACAAATCTAAAC+AGG | - | chr1_4:70847305-70847324 | None:intergenic | 25.0% |
| ! | AGTGATGAAAAATAGAGAAA+TGG | - | chr1_4:70847342-70847361 | None:intergenic | 25.0% |
| ! | CTTATAAAAATAAGGCTGAT+TGG | - | chr1_4:70847489-70847508 | None:intergenic | 25.0% |
| !!! | TCAGCCTTATTTTTATAAGA+AGG | + | chr1_4:70847490-70847509 | Msa0182370:CDS | 25.0% |
| ! | TCAGCCTTCTTATAAAAATA+AGG | - | chr1_4:70847497-70847516 | None:intergenic | 25.0% |
| !! | TTCAATACTTGATTGTTTCT+AGG | + | chr1_4:70847640-70847659 | Msa0182370:intron | 25.0% |
| !!! | TCAATACTTGATTGTTTCTA+GGG | + | chr1_4:70847641-70847660 | Msa0182370:intron | 25.0% |
| ! | TTTGTCCAAAACATTAATTG+AGG | + | chr1_4:70847971-70847990 | Msa0182370:intron | 25.0% |
| ! | AAAACATTAATTGAGGTTCT+GGG | + | chr1_4:70847978-70847997 | Msa0182370:intron | 25.0% |
| ! | TGTCCTAAACATTAGTATAT+AGG | + | chr1_4:70848304-70848323 | Msa0182370:intron | 25.0% |
| !!! | TCTATCAAGTTTTATGAAGA+TGG | + | chr1_4:70848333-70848352 | Msa0182370:intron | 25.0% |
| ! | ATGTTGAAATATCACATAAG+AGG | + | chr1_4:70848404-70848423 | Msa0182370:intron | 25.0% |
| ! | ATATGGTGATTGAGTTAATT+GGG | + | chr1_4:70848451-70848470 | Msa0182370:intron | 25.0% |
| ! | ATTATGTCTACAAATTTCAG+AGG | + | chr1_4:70848542-70848561 | Msa0182370:intron | 25.0% |
| !! | AGAATTGATCTTTTCTATTG+CGG | - | chr1_4:70848870-70848889 | None:intergenic | 25.0% |
| !!! | TTTTAAAATGTAGAGGAACA+AGG | - | chr1_4:70849140-70849159 | None:intergenic | 25.0% |
| ! | AATACTCATGCACAAATATA+AGG | + | chr1_4:70849260-70849279 | Msa0182370:three_prime_UTR | 25.0% |
| ! | AAGGAAAAAAAAAATTGGTC+TGG | + | chr1_4:70849407-70849426 | Msa0182370:three_prime_UTR | 25.0% |
| !! | TTGTGGTAACTTTTATTGAA+GGG | + | chr1_4:70849438-70849457 | Msa0182370:three_prime_UTR | 25.0% |
| !! | CATTCTAGAATAAGGAACAA+CGG | - | chr1_4:70842369-70842388 | None:intergenic | 30.0% |
| !! | ATCAGAGACATTCTAGAATA+AGG | - | chr1_4:70842377-70842396 | None:intergenic | 30.0% |
| AAGCTGAAATTGAATAAGGT+GGG | - | chr1_4:70842863-70842882 | None:intergenic | 30.0% | |
| TAAGCTGAAATTGAATAAGG+TGG | - | chr1_4:70842864-70842883 | None:intergenic | 30.0% | |
| TGACATGTTCAAACATAAAC+TGG | - | chr1_4:70842942-70842961 | None:intergenic | 30.0% | |
| ! | AACCTTTTGTAATGAGAACA+GGG | + | chr1_4:70843090-70843109 | Msa0182370:intron | 30.0% |
| TCGTTATAAATCTTATGTGG+TGG | - | chr1_4:70843368-70843387 | None:intergenic | 30.0% | |
| ACCACATAAGATTTATAACG+AGG | + | chr1_4:70843367-70843386 | Msa0182370:intron | 30.0% | |
| TCCTCGTTATAAATCTTATG+TGG | - | chr1_4:70843371-70843390 | None:intergenic | 30.0% | |
| ! | AACGCACTTTTATACAGTTA+AGG | - | chr1_4:70843542-70843561 | None:intergenic | 30.0% |
| TCACCAAAAATCATATATGG+GGG | - | chr1_4:70843698-70843717 | None:intergenic | 30.0% | |
| TGTGTACATGATATTATCAC+AGG | - | chr1_4:70843874-70843893 | None:intergenic | 30.0% | |
| TGATAATATCATGTACACAC+AGG | + | chr1_4:70843875-70843894 | Msa0182370:intron | 30.0% | |
| ! | TCAAATAAAAAAGGTGCAGT+TGG | - | chr1_4:70843944-70843963 | None:intergenic | 30.0% |
| AACAAGAAACTGAAAGGTTT+AGG | - | chr1_4:70844009-70844028 | None:intergenic | 30.0% | |
| AACAGAAACAAGAAACTGAA+AGG | - | chr1_4:70844015-70844034 | None:intergenic | 30.0% | |
| AACACCAAAAATGAAATGTG+AGG | + | chr1_4:70844300-70844319 | Msa0182370:intron | 30.0% | |
| !! | GTTTGTTGTCCAATTGAAAA+AGG | + | chr1_4:70844620-70844639 | Msa0182370:intron | 30.0% |
| CCGTATTTGTAAAAGATAAC+TGG | + | chr1_4:70844646-70844665 | Msa0182370:intron | 30.0% | |
| TATTCATTATGTTTGTGTGG+TGG | - | chr1_4:70844698-70844717 | None:intergenic | 30.0% | |
| GCTAGTTATTTGCATTTACA+TGG | + | chr1_4:70844855-70844874 | Msa0182370:intron | 30.0% | |
| TTCTTACTATGTTCTGTTCT+AGG | + | chr1_4:70845029-70845048 | Msa0182370:intron | 30.0% | |
| GAGTTAGAGCAACTTATAAA+TGG | + | chr1_4:70845150-70845169 | Msa0182370:CDS | 30.0% | |
| ! | AGTATTATTTTCCTTTCTGC+TGG | - | chr1_4:70845307-70845326 | None:intergenic | 30.0% |
| TCTTTCAATCCTTTACATGA+TGG | + | chr1_4:70845334-70845353 | Msa0182370:CDS | 30.0% | |
| CTTTCAATCCTTTACATGAT+GGG | + | chr1_4:70845335-70845354 | Msa0182370:CDS | 30.0% | |
| TACTTCTGTCAAAAGAACAT+GGG | - | chr1_4:70845399-70845418 | None:intergenic | 30.0% | |
| ATACTTCTGTCAAAAGAACA+TGG | - | chr1_4:70845400-70845419 | None:intergenic | 30.0% | |
| TCTTGGAACATATGAAGTTA+AGG | + | chr1_4:70845789-70845808 | Msa0182370:intron | 30.0% | |
| AAGTTAAGGTTAACTACATG+AGG | + | chr1_4:70845803-70845822 | Msa0182370:intron | 30.0% | |
| ! | ATGTGTAAAACGGGTATTTT+AGG | + | chr1_4:70845890-70845909 | Msa0182370:intron | 30.0% |
| !! | AAAGGGTGCTCTTATAAAAA+GGG | + | chr1_4:70845985-70846004 | Msa0182370:intron | 30.0% |
| TCGTCTCTTAACTTAATTTC+AGG | + | chr1_4:70846053-70846072 | Msa0182370:intron | 30.0% | |
| GTCAACCAATTTGAAAAAGT+TGG | + | chr1_4:70846863-70846882 | Msa0182370:CDS | 30.0% | |
| !!! | TCTCACCAACTTTTTCAAAT+TGG | - | chr1_4:70846871-70846890 | None:intergenic | 30.0% |
| ! | CAGATGATCTTTAAAAACCA+AGG | - | chr1_4:70846907-70846926 | None:intergenic | 30.0% |
| TAATATATGGTACATCAGAG+AGG | - | chr1_4:70846989-70847008 | None:intergenic | 30.0% | |
| AAGTCATTTACAACTTTAGG+TGG | - | chr1_4:70847431-70847450 | None:intergenic | 30.0% | |
| GAGAAGTCATTTACAACTTT+AGG | - | chr1_4:70847434-70847453 | None:intergenic | 30.0% | |
| !! | ATCAAGTATTGAAAAATGGC+AGG | - | chr1_4:70847633-70847652 | None:intergenic | 30.0% |
| AATCATATGGGATAGTAACA+TGG | - | chr1_4:70847712-70847731 | None:intergenic | 30.0% | |
| ACAAATTGACACACAGTTTA+AGG | - | chr1_4:70847840-70847859 | None:intergenic | 30.0% | |
| AATAGCAATTTCAATGTGCT+AGG | - | chr1_4:70847953-70847972 | None:intergenic | 30.0% | |
| ! | CAGAACCTCAATTAATGTTT+TGG | - | chr1_4:70847979-70847998 | None:intergenic | 30.0% |
| CAAAACATTAATTGAGGTTC+TGG | + | chr1_4:70847977-70847996 | Msa0182370:intron | 30.0% | |
| TCAAATACACAATGAGATGA+TGG | + | chr1_4:70848120-70848139 | Msa0182370:intron | 30.0% | |
| ! | TGATCTCTTTTTGGATCTAT+TGG | - | chr1_4:70848154-70848173 | None:intergenic | 30.0% |
| ! | GACATTCTATGATCTCTTTT+TGG | - | chr1_4:70848163-70848182 | None:intergenic | 30.0% |
| AAGAGATCATAGAATGTCAT+CGG | + | chr1_4:70848165-70848184 | Msa0182370:intron | 30.0% | |
| ACAAAGAGTTAGCAAAACTT+AGG | + | chr1_4:70848217-70848236 | Msa0182370:intron | 30.0% | |
| GTGTGAAAATCTTACATGAA+GGG | - | chr1_4:70848250-70848269 | None:intergenic | 30.0% | |
| CCACCTATATACTAATGTTT+AGG | - | chr1_4:70848310-70848329 | None:intergenic | 30.0% | |
| CCTAAACATTAGTATATAGG+TGG | + | chr1_4:70848307-70848326 | Msa0182370:intron | 30.0% | |
| !! | ATCAAGTTTTATGAAGATGG+AGG | + | chr1_4:70848336-70848355 | Msa0182370:intron | 30.0% |
| TTCATGTAACAAGATCATGT+GGG | - | chr1_4:70848374-70848393 | None:intergenic | 30.0% | |
| TTTCATGTAACAAGATCATG+TGG | - | chr1_4:70848375-70848394 | None:intergenic | 30.0% | |
| GATATGGTGATTGAGTTAAT+TGG | + | chr1_4:70848450-70848469 | Msa0182370:intron | 30.0% | |
| ACATTTGAGAAATGTCATGT+GGG | - | chr1_4:70848498-70848517 | None:intergenic | 30.0% | |
| AACATTTGAGAAATGTCATG+TGG | - | chr1_4:70848499-70848518 | None:intergenic | 30.0% | |
| !!! | AACATGTCTTTTAGTTCTTC+AGG | - | chr1_4:70848969-70848988 | None:intergenic | 30.0% |
| ! | TCTTTTTCTAATCTCAGTAG+AGG | - | chr1_4:70849030-70849049 | None:intergenic | 30.0% |
| ACTGAGATTAGAAAAAGAAG+TGG | + | chr1_4:70849032-70849051 | Msa0182370:CDS | 30.0% | |
| CTGAGATTAGAAAAAGAAGT+GGG | + | chr1_4:70849033-70849052 | Msa0182370:CDS | 30.0% | |
| ACAAATCCGCAATATAAAAG+TGG | + | chr1_4:70849111-70849130 | Msa0182370:three_prime_UTR | 30.0% | |
| !!! | GCGATTGTTTTAAAATGTAG+AGG | - | chr1_4:70849147-70849166 | None:intergenic | 30.0% |
| !!! | CTACATTTTAAAACAATCGC+AGG | + | chr1_4:70849147-70849166 | Msa0182370:three_prime_UTR | 30.0% |
| ! | TCCTTTTCATAGTTTCAAAG+AGG | + | chr1_4:70849212-70849231 | Msa0182370:three_prime_UTR | 30.0% |
| !! | TCCTCTTTGAAACTATGAAA+AGG | - | chr1_4:70849216-70849235 | None:intergenic | 30.0% |
| CAATAAAAGTTACCACAAGT+TGG | - | chr1_4:70849436-70849455 | None:intergenic | 30.0% | |
| ! | CTTGTGGTAACTTTTATTGA+AGG | + | chr1_4:70849437-70849456 | Msa0182370:three_prime_UTR | 30.0% |
| AAACGACATAGTAATGTCGA+TGG | - | chr1_4:70842173-70842192 | None:intergenic | 35.0% | |
| TTCTCGGGTTAATTGTAAGT+GGG | - | chr1_4:70842205-70842224 | None:intergenic | 35.0% | |
| ATTCTCGGGTTAATTGTAAG+TGG | - | chr1_4:70842206-70842225 | None:intergenic | 35.0% | |
| TACAATTAACCCGAGAATGA+CGG | + | chr1_4:70842208-70842227 | Msa0182370:exon | 35.0% | |
| AATGTCTCTGATTCAGTTAC+TGG | + | chr1_4:70842385-70842404 | Msa0182370:CDS | 35.0% | |
| ATGTCTCTGATTCAGTTACT+GGG | + | chr1_4:70842386-70842405 | Msa0182370:CDS | 35.0% | |
| ! | TGTTGACTACAAAACTGAGA+TGG | - | chr1_4:70842511-70842530 | None:intergenic | 35.0% |
| TTAGATTAGTGAAGCAACCT+GGG | - | chr1_4:70842588-70842607 | None:intergenic | 35.0% | |
| ATTAGATTAGTGAAGCAACC+TGG | - | chr1_4:70842589-70842608 | None:intergenic | 35.0% | |
| ATGTGAAACTAAACTACCCA+AGG | + | chr1_4:70843053-70843072 | Msa0182370:intron | 35.0% | |
| ! | GAACCTTTTGTAATGAGAAC+AGG | + | chr1_4:70843089-70843108 | Msa0182370:intron | 35.0% |
| AACCCTGTTCTCATTACAAA+AGG | - | chr1_4:70843095-70843114 | None:intergenic | 35.0% | |
| TTTGTAATGAGAACAGGGTT+AGG | + | chr1_4:70843095-70843114 | Msa0182370:intron | 35.0% | |
| !! | TTGGAAAGCATTGAGAAGTT+AGG | + | chr1_4:70843138-70843157 | Msa0182370:intron | 35.0% |
| !! | AAAGCATTGAGAAGTTAGGT+GGG | + | chr1_4:70843142-70843161 | Msa0182370:intron | 35.0% |
| ACTTGTGTTTCAGGAACTAT+TGG | + | chr1_4:70843221-70843240 | Msa0182370:intron | 35.0% | |
| TAATACAGCTAGCTCCATTT+AGG | - | chr1_4:70843462-70843481 | None:intergenic | 35.0% | |
| CTGTATTAGTCATGGATACA+TGG | + | chr1_4:70843474-70843493 | Msa0182370:intron | 35.0% | |
| !!! | ACTTCTTTTCAAGTTTCCTC+TGG | + | chr1_4:70843562-70843581 | Msa0182370:intron | 35.0% |
| ! | TGATCGACTTTGGATATCAA+GGG | + | chr1_4:70843782-70843801 | Msa0182370:CDS | 35.0% |
| AGATAACAGTACCTTAGTCA+AGG | - | chr1_4:70843811-70843830 | None:intergenic | 35.0% | |
| CCTTTAGTGACTATAGGAAA+GGG | - | chr1_4:70844038-70844057 | None:intergenic | 35.0% | |
| TAAGAGCCTTTAGTGACTAT+AGG | - | chr1_4:70844044-70844063 | None:intergenic | 35.0% | |
| CTCTTAATCCAGGAACAAAT+AGG | + | chr1_4:70844058-70844077 | Msa0182370:intron | 35.0% | |
| TTGACATGATTGAATGCCTT+AGG | - | chr1_4:70844084-70844103 | None:intergenic | 35.0% | |
| TCTTAATGCAGAACTACTCA+AGG | - | chr1_4:70844190-70844209 | None:intergenic | 35.0% | |
| ! | CCAGTTACAACATCTTTTCT+CGG | - | chr1_4:70844223-70844242 | None:intergenic | 35.0% |
| CTTCATGTGAAATTGAAGAC+AGG | - | chr1_4:70844346-70844365 | None:intergenic | 35.0% | |
| ACATGAAGAACAAGCTTCTA+TGG | + | chr1_4:70844358-70844377 | Msa0182370:intron | 35.0% | |
| ! | TTAACCATTTTGGACCACTA+AGG | - | chr1_4:70844400-70844419 | None:intergenic | 35.0% |
| AGTGGTCCAAAATGGTTAAA+CGG | + | chr1_4:70844401-70844420 | Msa0182370:intron | 35.0% | |
| AAGGGAAGCGAACAATAAAA+TGG | + | chr1_4:70844508-70844527 | Msa0182370:intron | 35.0% | |
| !!! | ATACGGACACCTTTTTCAAT+TGG | - | chr1_4:70844632-70844651 | None:intergenic | 35.0% |
| ATTATGTTTGTGTGGTGGTT+GGG | - | chr1_4:70844693-70844712 | None:intergenic | 35.0% | |
| AGATCCCATAAAATGAGATC+AGG | + | chr1_4:70844927-70844946 | Msa0182370:intron | 35.0% | |
| GAAAGGAAAATAATACTGCC+TGG | + | chr1_4:70845310-70845329 | Msa0182370:CDS | 35.0% | |
| TGTAAAGGATTGAAAGAACC+AGG | - | chr1_4:70845331-70845350 | None:intergenic | 35.0% | |
| TTGATATGCCCATCATGTAA+AGG | - | chr1_4:70845346-70845365 | None:intergenic | 35.0% | |
| AAGAACATGGGTTTCTATAC+CGG | - | chr1_4:70845387-70845406 | None:intergenic | 35.0% | |
| AACTATACTGGTAACTCCAA+GGG | - | chr1_4:70845696-70845715 | None:intergenic | 35.0% | |
| ACTTCATATGTTCCAAGACA+CGG | - | chr1_4:70845787-70845806 | None:intergenic | 35.0% | |
| TTAACTACATGAGGAATGCT+AGG | + | chr1_4:70845812-70845831 | Msa0182370:intron | 35.0% | |
| !! | CAAAGGGTGCTCTTATAAAA+AGG | + | chr1_4:70845984-70846003 | Msa0182370:intron | 35.0% |
| !!! | TCCTTGTTTTGAACTATCTG+CGG | + | chr1_4:70846793-70846812 | Msa0182370:CDS | 35.0% |
| !!! | GAGATTTTTTATGCTCTCCT+TGG | + | chr1_4:70846887-70846906 | Msa0182370:intron | 35.0% |
| TAGTGAAGAGTAGGATTAAG+AGG | + | chr1_4:70847112-70847131 | Msa0182370:intron | 35.0% | |
| !! | ACATTCAGCCACTTGTTTTT+GGG | + | chr1_4:70847216-70847235 | Msa0182370:intron | 35.0% |
| GTATGAAACTACTTACTGCT+TGG | + | chr1_4:70847575-70847594 | Msa0182370:intron | 35.0% | |
| AAAGCGCATCATTTAGTCAT+TGG | + | chr1_4:70847774-70847793 | Msa0182370:intron | 35.0% | |
| AACTGTGTGTCAATTTGTAG+TGG | + | chr1_4:70847842-70847861 | Msa0182370:intron | 35.0% | |
| ! | AACAAAAGTCGGTCCATTTT+AGG | - | chr1_4:70847890-70847909 | None:intergenic | 35.0% |
| TTCTGGGTGAATAAGTAAGA+TGG | + | chr1_4:70847994-70848013 | Msa0182370:intron | 35.0% | |
| !! | ACAATGAGATGATGGAAAGT+GGG | + | chr1_4:70848128-70848147 | Msa0182370:intron | 35.0% |
| GAGTTAGCAAAACTTAGGAA+CGG | + | chr1_4:70848222-70848241 | Msa0182370:intron | 35.0% | |
| CGTGTGAAAATCTTACATGA+AGG | - | chr1_4:70848251-70848270 | None:intergenic | 35.0% | |
| !!! | GACATAATGCTGTTTTCAAG+AGG | - | chr1_4:70848530-70848549 | None:intergenic | 35.0% |
| !! | TATTTCTCATTTTTGCCTCG+TGG | + | chr1_4:70848619-70848638 | Msa0182370:intron | 35.0% |
| !! | ATTTCTCATTTTTGCCTCGT+GGG | + | chr1_4:70848620-70848639 | Msa0182370:intron | 35.0% |
| ACATATACCATTCAGACTTG+TGG | - | chr1_4:70848657-70848676 | None:intergenic | 35.0% | |
| AGTCTGAATGGTATATGTAG+TGG | + | chr1_4:70848659-70848678 | Msa0182370:intron | 35.0% | |
| TTGCAGCCTAAATACTATGA+TGG | + | chr1_4:70848744-70848763 | Msa0182370:intron | 35.0% | |
| TGCAGCCTAAATACTATGAT+GGG | + | chr1_4:70848745-70848764 | Msa0182370:intron | 35.0% | |
| TAGTCCCCATCATAGTATTT+AGG | - | chr1_4:70848753-70848772 | None:intergenic | 35.0% | |
| AACAAGATGCTGAAGATACT+TGG | + | chr1_4:70848774-70848793 | Msa0182370:CDS | 35.0% | |
| GAATGTAGATGGTGCATTTA+AGG | + | chr1_4:70848839-70848858 | Msa0182370:CDS | 35.0% | |
| ATGTTATTGAGGACATTGTG+TGG | + | chr1_4:70848914-70848933 | Msa0182370:intron | 35.0% | |
| ! | TTTTTATGGCTGAAGGTCAA+AGG | + | chr1_4:70849065-70849084 | Msa0182370:three_prime_UTR | 35.0% |
| !! | AGGTCACCACTTTTATATTG+CGG | - | chr1_4:70849120-70849139 | None:intergenic | 35.0% |
| !!! | CATTTTAAAACAATCGCAGG+AGG | + | chr1_4:70849150-70849169 | Msa0182370:three_prime_UTR | 35.0% |
| GTTCGATGAACATAAAACCT+TGG | - | chr1_4:70849190-70849209 | None:intergenic | 35.0% | |
| ! | AGAGGAGTGTATTGCTTCTA+CGG | - | chr1_4:70842252-70842271 | None:intergenic | 40.0% |
| !! | AGATAGAGAACGGTTTGGTA+TGG | - | chr1_4:70842275-70842294 | None:intergenic | 40.0% |
| ! | AAGAACAGTATTGGAAGCAC+CGG | - | chr1_4:70842342-70842361 | None:intergenic | 40.0% |
| AACGGCTTCAAGAACAGTAT+TGG | - | chr1_4:70842351-70842370 | None:intergenic | 40.0% | |
| TCAACAGACTGCTGAAGATA+TGG | + | chr1_4:70842525-70842544 | Msa0182370:intron | 40.0% | |
| TAGATTAGTGAAGCAACCTG+GGG | - | chr1_4:70842587-70842606 | None:intergenic | 40.0% | |
| TTCACCTGTTGTGATTCCTT+GGG | - | chr1_4:70843072-70843091 | None:intergenic | 40.0% | |
| !! | GAAAGCATTGAGAAGTTAGG+TGG | + | chr1_4:70843141-70843160 | Msa0182370:intron | 40.0% |
| AATAACCTGCTAGTACCACT+TGG | + | chr1_4:70843182-70843201 | Msa0182370:intron | 40.0% | |
| ATAATCCAAGTGGTACTAGC+AGG | - | chr1_4:70843190-70843209 | None:intergenic | 40.0% | |
| AATCATATATGGGGGAGCAA+GGG | - | chr1_4:70843690-70843709 | None:intergenic | 40.0% | |
| AAATCATATATGGGGGAGCA+AGG | - | chr1_4:70843691-70843710 | None:intergenic | 40.0% | |
| ! | GCTCCCCCATATATGATTTT+TGG | + | chr1_4:70843692-70843711 | Msa0182370:intron | 40.0% |
| ! | CTGATCGACTTTGGATATCA+AGG | + | chr1_4:70843781-70843800 | Msa0182370:CDS | 40.0% |
| CCCTTTCCTATAGTCACTAA+AGG | + | chr1_4:70844035-70844054 | Msa0182370:intron | 40.0% | |
| GCCTTTAGTGACTATAGGAA+AGG | - | chr1_4:70844039-70844058 | None:intergenic | 40.0% | |
| TCACTAAAGGCTCTTAATCC+AGG | + | chr1_4:70844048-70844067 | Msa0182370:intron | 40.0% | |
| CATCGGTACAAGATAAAGCT+AGG | + | chr1_4:70844132-70844151 | Msa0182370:intron | 40.0% | |
| CCGAGAAAAGATGTTGTAAC+TGG | + | chr1_4:70844220-70844239 | Msa0182370:intron | 40.0% | |
| GAAGACAGGAACACAACAAA+GGG | - | chr1_4:70844332-70844351 | None:intergenic | 40.0% | |
| TGAAGACAGGAACACAACAA+AGG | - | chr1_4:70844333-70844352 | None:intergenic | 40.0% | |
| CGCTTCAATTACAACCTTAG+TGG | + | chr1_4:70844383-70844402 | Msa0182370:intron | 40.0% | |
| ACAACCTTAGTGGTCCAAAA+TGG | + | chr1_4:70844393-70844412 | Msa0182370:intron | 40.0% | |
| !!! | TGGTTTTATGGTGGCTATGA+AGG | + | chr1_4:70844440-70844459 | Msa0182370:intron | 40.0% |
| TTATGTTTGTGTGGTGGTTG+GGG | - | chr1_4:70844692-70844711 | None:intergenic | 40.0% | |
| CATTATGTTTGTGTGGTGGT+TGG | - | chr1_4:70844694-70844713 | None:intergenic | 40.0% | |
| TACTCGAGAAGAAGAAGACA+GGG | + | chr1_4:70844767-70844786 | Msa0182370:CDS | 40.0% | |
| ! | TTCTAGCCATCTTTTGCTCA+AGG | + | chr1_4:70844791-70844810 | Msa0182370:CDS | 40.0% |
| TACACACCTTGAGCAAAAGA+TGG | - | chr1_4:70844800-70844819 | None:intergenic | 40.0% | |
| ! | TTTTGCTCAAGGTGTGTAAC+AGG | + | chr1_4:70844802-70844821 | Msa0182370:intron | 40.0% |
| GGTTCCTTCCAATGATATTC+CGG | + | chr1_4:70845071-70845090 | Msa0182370:CDS | 40.0% | |
| AACTCCGGAATATCATTGGA+AGG | - | chr1_4:70845078-70845097 | None:intergenic | 40.0% | |
| ACTCAACTCCGGAATATCAT+TGG | - | chr1_4:70845082-70845101 | None:intergenic | 40.0% | |
| ACATCTGATTCACTCAACTC+CGG | - | chr1_4:70845093-70845112 | None:intergenic | 40.0% | |
| TTTCAGAGATACCAGCAGAA+AGG | + | chr1_4:70845293-70845312 | Msa0182370:intron | 40.0% | |
| AGAACATGGGTTTCTATACC+GGG | - | chr1_4:70845386-70845405 | None:intergenic | 40.0% | |
| AATCCCACAGCTATACTTGT+GGG | - | chr1_4:70845607-70845626 | None:intergenic | 40.0% | |
| TAATCCCACAGCTATACTTG+TGG | - | chr1_4:70845608-70845627 | None:intergenic | 40.0% | |
| TTAACCGATGGGATCATGAA+TGG | + | chr1_4:70845625-70845644 | Msa0182370:intron | 40.0% | |
| AATCCTACAGTCAACGCTTA+AGG | - | chr1_4:70845669-70845688 | None:intergenic | 40.0% | |
| GAACTATACTGGTAACTCCA+AGG | - | chr1_4:70845697-70845716 | None:intergenic | 40.0% | |
| AGTTACCAGTATAGTTCACC+TGG | + | chr1_4:70845700-70845719 | Msa0182370:intron | 40.0% | |
| GTTACCAGTATAGTTCACCT+GGG | + | chr1_4:70845701-70845720 | Msa0182370:intron | 40.0% | |
| TCGGGAGAACAAACAGATAA+AGG | + | chr1_4:70846370-70846389 | Msa0182370:intron | 40.0% | |
| ACCGCAGATAGTTCAAAACA+AGG | - | chr1_4:70846797-70846816 | None:intergenic | 40.0% | |
| TGCAGACAAACCTCCATTAT+CGG | + | chr1_4:70846820-70846839 | Msa0182370:CDS | 40.0% | |
| ! | TTGATCTGAGACACCGATAA+TGG | - | chr1_4:70846836-70846855 | None:intergenic | 40.0% |
| ATTCGTTAGGGCAGTTAGTT+AGG | + | chr1_4:70847151-70847170 | Msa0182370:intron | 40.0% | |
| TTCGTTAGGGCAGTTAGTTA+GGG | + | chr1_4:70847152-70847171 | Msa0182370:intron | 40.0% | |
| !! | GACATTCAGCCACTTGTTTT+TGG | + | chr1_4:70847215-70847234 | Msa0182370:intron | 40.0% |
| AGTTCTCTCCCAAAAACAAG+TGG | - | chr1_4:70847227-70847246 | None:intergenic | 40.0% | |
| GACTTCTCTACGATAAATGC+AGG | + | chr1_4:70847446-70847465 | Msa0182370:intron | 40.0% | |
| AAGAAGGCTGAACTATTTCC+TGG | + | chr1_4:70847506-70847525 | Msa0182370:CDS | 40.0% | |
| AACATGGTCCAACAGAATCT+GGG | - | chr1_4:70847696-70847715 | None:intergenic | 40.0% | |
| TAACATGGTCCAACAGAATC+TGG | - | chr1_4:70847697-70847716 | None:intergenic | 40.0% | |
| GTGTGTCAATTTGTAGTGGT+TGG | + | chr1_4:70847846-70847865 | Msa0182370:intron | 40.0% | |
| !! | CACAATGAGATGATGGAAAG+TGG | + | chr1_4:70848127-70848146 | Msa0182370:intron | 40.0% |
| AGATCATAGAATGTCATCGG+TGG | + | chr1_4:70848168-70848187 | Msa0182370:intron | 40.0% | |
| TCTATGACCTATGCTGAGAA+AGG | - | chr1_4:70848432-70848451 | None:intergenic | 40.0% | |
| CTCAGCATAGGTCATAGATA+TGG | + | chr1_4:70848434-70848453 | Msa0182370:intron | 40.0% | |
| TGGTGATTGAGTTAATTGGG+AGG | + | chr1_4:70848454-70848473 | Msa0182370:intron | 40.0% | |
| TTCAGAGGCTAAACACGTTA+AGG | + | chr1_4:70848557-70848576 | Msa0182370:intron | 40.0% | |
| TACCATTCAGACTTGTGGTT+TGG | - | chr1_4:70848652-70848671 | None:intergenic | 40.0% | |
| AAGCACAGAATGCGAATTTC+AGG | - | chr1_4:70848696-70848715 | None:intergenic | 40.0% | |
| GCAGCCTAAATACTATGATG+GGG | + | chr1_4:70848746-70848765 | Msa0182370:intron | 40.0% | |
| AAGATGCTGAAGATACTTGG+TGG | + | chr1_4:70848777-70848796 | Msa0182370:CDS | 40.0% | |
| ! | CTTGGTGGTTGTAAAGAAAC+AGG | + | chr1_4:70848792-70848811 | Msa0182370:CDS | 40.0% |
| CAGTAGAGGATATATCCATG+CGG | - | chr1_4:70849016-70849035 | None:intergenic | 40.0% | |
| ! | AGGTACAGTTTTCTGATCCA+AGG | + | chr1_4:70849170-70849189 | Msa0182370:three_prime_UTR | 40.0% |
| CTCTTGTTGGGATTTGTAAC+TGG | + | chr1_4:70849367-70849386 | Msa0182370:three_prime_UTR | 40.0% | |
| ! | GGTGTGTGGTCTATTTTCAA+AGG | + | chr1_4:70849388-70849407 | Msa0182370:three_prime_UTR | 40.0% |
| ATGCAAGCTTCCGTCATTCT+CGG | - | chr1_4:70842221-70842240 | None:intergenic | 45.0% | |
| CAGCAAGATAGAGAACGGTT+TGG | - | chr1_4:70842280-70842299 | None:intergenic | 45.0% | |
| CAAACCGTTCTCTATCTTGC+TGG | + | chr1_4:70842278-70842297 | Msa0182370:CDS | 45.0% | |
| !! | GGTTTGTTGCTATCTGTTCC+CGG | + | chr1_4:70842320-70842339 | Msa0182370:CDS | 45.0% |
| !! | AGAACAGTATTGGAAGCACC+GGG | - | chr1_4:70842341-70842360 | None:intergenic | 45.0% |
| TCTGATTCAGTTACTGGGCA+AGG | + | chr1_4:70842391-70842410 | Msa0182370:CDS | 45.0% | |
| CGATGAGCGCATGTGTTATA+AGG | + | chr1_4:70842686-70842705 | Msa0182370:intron | 45.0% | |
| TGATTAGGATCCCCAGTTGT+TGG | + | chr1_4:70842742-70842761 | Msa0182370:intron | 45.0% | |
| !! | TTCACCGGTTCTTTGGTTAG+CGG | + | chr1_4:70842772-70842791 | Msa0182370:intron | 45.0% |
| ! | TACCTATGTTCCCCGTGTTT+TGG | - | chr1_4:70842802-70842821 | None:intergenic | 45.0% |
| GATATGCCTAGCTACCGAAA+AGG | + | chr1_4:70842899-70842918 | Msa0182370:intron | 45.0% | |
| ! | AGGAAACCTTTTCGGTAGCT+AGG | - | chr1_4:70842908-70842927 | None:intergenic | 45.0% |
| TACCGAAAAGGTTTCCTCGT+GGG | + | chr1_4:70842911-70842930 | Msa0182370:intron | 45.0% | |
| ACTACCCAAGGAATCACAAC+AGG | + | chr1_4:70843065-70843084 | Msa0182370:intron | 45.0% | |
| GTTCACCTGTTGTGATTCCT+TGG | - | chr1_4:70843073-70843092 | None:intergenic | 45.0% | |
| GGAGCTAGCTGTATTAGTCA+TGG | + | chr1_4:70843466-70843485 | Msa0182370:intron | 45.0% | |
| ATCAAGGGTGACCTTGACTA+AGG | + | chr1_4:70843797-70843816 | Msa0182370:CDS | 45.0% | |
| TCCAGGAACAAATAGGCCTA+AGG | + | chr1_4:70844065-70844084 | Msa0182370:intron | 45.0% | |
| GGTCCAAAATGGTTAAACGG+AGG | + | chr1_4:70844404-70844423 | Msa0182370:intron | 45.0% | |
| ! | CCACCTCCGTTTAACCATTT+TGG | - | chr1_4:70844410-70844429 | None:intergenic | 45.0% |
| CCAAAATGGTTAAACGGAGG+TGG | + | chr1_4:70844407-70844426 | Msa0182370:intron | 45.0% | |
| AAATGGTTAAACGGAGGTGG+TGG | + | chr1_4:70844410-70844429 | Msa0182370:intron | 45.0% | |
| ATGGTGGCTATGAAGGAACA+AGG | + | chr1_4:70844447-70844466 | Msa0182370:intron | 45.0% | |
| GAACATTTCCGAGAAAGCAG+CGG | + | chr1_4:70844480-70844499 | Msa0182370:intron | 45.0% | |
| ! | CTTTCTTACCGCTGCTTTCT+CGG | - | chr1_4:70844491-70844510 | None:intergenic | 45.0% |
| GAGAAAGCAGCGGTAAGAAA+GGG | + | chr1_4:70844490-70844509 | Msa0182370:intron | 45.0% | |
| TATGTTTGTGTGGTGGTTGG+GGG | - | chr1_4:70844691-70844710 | None:intergenic | 45.0% | |
| GTACTCGAGAAGAAGAAGAC+AGG | + | chr1_4:70844766-70844785 | Msa0182370:CDS | 45.0% | |
| GGCTATTGCAAATGCATGCA+AGG | + | chr1_4:70845050-70845069 | Msa0182370:intron | 45.0% | |
| ! | TGATGGGCATATCAAGCTCA+TGG | + | chr1_4:70845351-70845370 | Msa0182370:CDS | 45.0% |
| AATCCCCACAAGTATAGCTG+TGG | + | chr1_4:70845600-70845619 | Msa0182370:intron | 45.0% | |
| ATCCCCACAAGTATAGCTGT+GGG | + | chr1_4:70845601-70845620 | Msa0182370:intron | 45.0% | |
| ATCCCACAGCTATACTTGTG+GGG | - | chr1_4:70845606-70845625 | None:intergenic | 45.0% | |
| ATAGCTGTGGGATTAACCGA+TGG | + | chr1_4:70845613-70845632 | Msa0182370:intron | 45.0% | |
| TAGCTGTGGGATTAACCGAT+GGG | + | chr1_4:70845614-70845633 | Msa0182370:intron | 45.0% | |
| ACCACCATTCATGATCCCAT+CGG | - | chr1_4:70845632-70845651 | None:intergenic | 45.0% | |
| CTACAGTCAACGCTTAAGGA+AGG | - | chr1_4:70845665-70845684 | None:intergenic | 45.0% | |
| !! | CTTCCTTAAGCGTTGACTGT+AGG | + | chr1_4:70845663-70845682 | Msa0182370:intron | 45.0% |
| GACTGTAGGATTTGAACCCT+TGG | + | chr1_4:70845677-70845696 | Msa0182370:intron | 45.0% | |
| TGAACCCAGGTGAACTATAC+TGG | - | chr1_4:70845708-70845727 | None:intergenic | 45.0% | |
| TAAGAGTAGACTGTGAACCC+AGG | - | chr1_4:70845721-70845740 | None:intergenic | 45.0% | |
| GCACATCTATGCAGCATTTG+CGG | + | chr1_4:70846761-70846780 | Msa0182370:intron | 45.0% | |
| TATGCAGCATTTGCGGTGAT+GGG | + | chr1_4:70846768-70846787 | Msa0182370:intron | 45.0% | |
| ! | ATCTGAGACACCGATAATGG+AGG | - | chr1_4:70846833-70846852 | None:intergenic | 45.0% |
| TCGTTAGGGCAGTTAGTTAG+GGG | + | chr1_4:70847153-70847172 | Msa0182370:intron | 45.0% | |
| !! | CCAATTACAAAAGCACTGCC+AGG | - | chr1_4:70847527-70847546 | None:intergenic | 45.0% |
| ! | CCTGGCAGTGCTTTTGTAAT+TGG | + | chr1_4:70847524-70847543 | Msa0182370:CDS | 45.0% |
| CACTCAATCCCAGATTCTGT+TGG | + | chr1_4:70847685-70847704 | Msa0182370:intron | 45.0% | |
| TCATAGAATGTCATCGGTGG+TGG | + | chr1_4:70848171-70848190 | Msa0182370:intron | 45.0% | |
| AGAGGATCCTTTCTCAGCAT+AGG | + | chr1_4:70848422-70848441 | Msa0182370:intron | 45.0% | |
| ! | ATTCAGACTTGTGGTTTGGC+TGG | - | chr1_4:70848648-70848667 | None:intergenic | 45.0% |
| AGCCAAACCACAAGTCTGAA+TGG | + | chr1_4:70848647-70848666 | Msa0182370:intron | 45.0% | |
| TGCGGATTTGTGCTTCATGA+AGG | - | chr1_4:70849102-70849121 | None:intergenic | 45.0% | |
| TGGGATTTGTAACTGGTGTG+TGG | + | chr1_4:70849374-70849393 | Msa0182370:three_prime_UTR | 45.0% | |
| !!! | TTAAATTTATTTTCATTTAT+TGG | + | chr1_4:70846708-70846727 | Msa0182370:intron | 5.0% |
| TGCAAGCTTCCGTCATTCTC+GGG | - | chr1_4:70842220-70842239 | None:intergenic | 50.0% | |
| GTATTGCTTCTACGGCGGTT+CGG | - | chr1_4:70842244-70842263 | None:intergenic | 50.0% | |
| GGAGTGTATTGCTTCTACGG+CGG | - | chr1_4:70842249-70842268 | None:intergenic | 50.0% | |
| !! | GAGAACGGTTTGGTATGGAG+AGG | - | chr1_4:70842270-70842289 | None:intergenic | 50.0% |
| ACCGTTCTCTATCTTGCTGG+CGG | + | chr1_4:70842281-70842300 | Msa0182370:CDS | 50.0% | |
| TCCGCCAGCAAGATAGAGAA+CGG | - | chr1_4:70842285-70842304 | None:intergenic | 50.0% | |
| ATTAGTGAAGCAACCTGGGG+AGG | - | chr1_4:70842584-70842603 | None:intergenic | 50.0% | |
| TGAAGCCCACACCAACAACT+GGG | - | chr1_4:70842756-70842775 | None:intergenic | 50.0% | |
| ACGACCGCTAACCAAAGAAC+CGG | - | chr1_4:70842779-70842798 | None:intergenic | 50.0% | |
| GTTAGCGGTCGTCCAAAACA+CGG | + | chr1_4:70842787-70842806 | Msa0182370:intron | 50.0% | |
| TTAGCGGTCGTCCAAAACAC+GGG | + | chr1_4:70842788-70842807 | Msa0182370:intron | 50.0% | |
| GTCCAAAACACGGGGAACAT+AGG | + | chr1_4:70842797-70842816 | Msa0182370:intron | 50.0% | |
| CTACCGAAAAGGTTTCCTCG+TGG | + | chr1_4:70842910-70842929 | Msa0182370:intron | 50.0% | |
| ACCGAAAAGGTTTCCTCGTG+GGG | + | chr1_4:70842912-70842931 | Msa0182370:intron | 50.0% | |
| ATAAACTGGAATCCCCCACG+AGG | - | chr1_4:70842928-70842947 | None:intergenic | 50.0% | |
| ! | CAAGGACAGCTGATCGACTT+TGG | + | chr1_4:70843772-70843791 | Msa0182370:CDS | 50.0% |
| GCCTTAGGCCTATTTGTTCC+TGG | - | chr1_4:70844069-70844088 | None:intergenic | 50.0% | |
| AGCCACCATAAAACCACCAC+CGG | - | chr1_4:70844436-70844455 | None:intergenic | 50.0% | |
| GAAGGAACAAGGTAATGCCG+CGG | + | chr1_4:70844458-70844477 | Msa0182370:intron | 50.0% | |
| GCTTTCTCGGAAATGTTCCG+CGG | - | chr1_4:70844478-70844497 | None:intergenic | 50.0% | |
| CGAGAAAGCAGCGGTAAGAA+AGG | + | chr1_4:70844489-70844508 | Msa0182370:intron | 50.0% | |
| AGCTCATGGAAGTTGCAACC+CGG | + | chr1_4:70845365-70845384 | Msa0182370:CDS | 50.0% | |
| ACCGATGGGATCATGAATGG+TGG | + | chr1_4:70845628-70845647 | Msa0182370:intron | 50.0% | |
| CTATGCAGCATTTGCGGTGA+TGG | + | chr1_4:70846767-70846786 | Msa0182370:intron | 50.0% | |
| TGATGACAAGCAGAAGCCCT+TGG | + | chr1_4:70847259-70847278 | Msa0182370:intron | 50.0% | |
| GATGACAAGCAGAAGCCCTT+GGG | + | chr1_4:70847260-70847279 | Msa0182370:intron | 50.0% | |
| ATGACAAGCAGAAGCCCTTG+GGG | + | chr1_4:70847261-70847280 | Msa0182370:intron | 50.0% | |
| CCAAGAGATACTCTCCCCAA+GGG | - | chr1_4:70847278-70847297 | None:intergenic | 50.0% | |
| ACCAAGAGATACTCTCCCCA+AGG | - | chr1_4:70847279-70847298 | None:intergenic | 50.0% | |
| AACAGGATGCACCTTCCTTG+TGG | + | chr1_4:70848809-70848828 | Msa0182370:CDS | 50.0% | |
| !! | AGGACATTGTGTGGTGCTAC+AGG | + | chr1_4:70848923-70848942 | Msa0182370:intron | 50.0% |
| CAAAGAGGAGTCGTGTGTGT+TGG | + | chr1_4:70849227-70849246 | Msa0182370:three_prime_UTR | 50.0% | |
| TTGGTCTGGTTGCCAACTTG+TGG | + | chr1_4:70849421-70849440 | Msa0182370:three_prime_UTR | 50.0% | |
| AGGATCCCCAGTTGTTGGTG+TGG | + | chr1_4:70842747-70842766 | Msa0182370:intron | 55.0% | |
| GGATCCCCAGTTGTTGGTGT+GGG | + | chr1_4:70842748-70842767 | Msa0182370:intron | 55.0% | |
| GAAGCCCACACCAACAACTG+GGG | - | chr1_4:70842755-70842774 | None:intergenic | 55.0% | |
| GTGAAGCCCACACCAACAAC+TGG | - | chr1_4:70842757-70842776 | None:intergenic | 55.0% | |
| GTTGTTGGTGTGGGCTTCAC+CGG | + | chr1_4:70842757-70842776 | Msa0182370:intron | 55.0% | |
| !! | TGTGGGCTTCACCGGTTCTT+TGG | + | chr1_4:70842765-70842784 | Msa0182370:intron | 55.0% |
| TAGCGGTCGTCCAAAACACG+GGG | + | chr1_4:70842789-70842808 | Msa0182370:intron | 55.0% | |
| ! | CCCCCACGAGGAAACCTTTT+CGG | - | chr1_4:70842916-70842935 | None:intergenic | 55.0% |
| CCGAAAAGGTTTCCTCGTGG+GGG | + | chr1_4:70842913-70842932 | Msa0182370:intron | 55.0% | |
| !! | CCCTTGGGGAGAGTATCTCT+TGG | + | chr1_4:70847275-70847294 | Msa0182370:intron | 55.0% |
| !! | TTGGTGCTGACACAGCAGTG+AGG | + | chr1_4:70847543-70847562 | Msa0182370:CDS | 55.0% |
| ATTCCGACCAGCCACAAGGA+AGG | - | chr1_4:70848823-70848842 | None:intergenic | 55.0% | |
| CTACATTCCGACCAGCCACA+AGG | - | chr1_4:70848827-70848846 | None:intergenic | 55.0% | |
| ! | GTGGCTGGTCGGAATGTAGA+TGG | + | chr1_4:70848828-70848847 | Msa0182370:CDS | 55.0% |
| GCGGAACTGTTCAGCTGGAA+TGG | - | chr1_4:70848997-70849016 | None:intergenic | 55.0% | |
| TCCAGCTGAACAGTTCCGCA+TGG | + | chr1_4:70848998-70849017 | Msa0182370:CDS | 55.0% | |
| TCCATGCGGAACTGTTCAGC+TGG | - | chr1_4:70849002-70849021 | None:intergenic | 55.0% | |
| TCTTGCTGGCGGAGCTTCTC+AGG | + | chr1_4:70842292-70842311 | Msa0182370:CDS | 60.0% | |
| TGGCGGAGCTTCTCAGGTTC+TGG | + | chr1_4:70842298-70842317 | Msa0182370:CDS | 60.0% | |
| GGCGGAGCTTCTCAGGTTCT+GGG | + | chr1_4:70842299-70842318 | Msa0182370:CDS | 60.0% | |
| GCTCTTAAGCTCTCCTCCCC+AGG | + | chr1_4:70842568-70842587 | Msa0182370:intron | 60.0% | |
| !! | TGGGGGAGCAAGGGTATCAC+AGG | - | chr1_4:70843681-70843700 | None:intergenic | 60.0% |
| ! | GGTTAAACGGAGGTGGTGGC+CGG | + | chr1_4:70844414-70844433 | Msa0182370:intron | 60.0% |
| !! | GGTGGCCGGTGGTGGTTTTA+TGG | + | chr1_4:70844428-70844447 | Msa0182370:intron | 60.0% |
| !!! | GGCCGGTGGTGGTTTTATGG+TGG | + | chr1_4:70844431-70844450 | Msa0182370:intron | 60.0% |
| TTGTGTGGTGGTTGGGGGAG+AGG | - | chr1_4:70844686-70844705 | None:intergenic | 60.0% | |
| GGATGCACCTTCCTTGTGGC+TGG | + | chr1_4:70848813-70848832 | Msa0182370:CDS | 60.0% | |
| GCACCTTCCTTGTGGCTGGT+CGG | + | chr1_4:70848817-70848836 | Msa0182370:CDS | 60.0% | |
| ! | TAAACGGAGGTGGTGGCCGG+TGG | + | chr1_4:70844417-70844436 | Msa0182370:intron | 65.0% |
| ! | TGGTTTGGCTGGCACCCACG+AGG | - | chr1_4:70848637-70848656 | None:intergenic | 65.0% |
| GTGGTGGTTGGGGGAGAGGC+TGG | - | chr1_4:70844682-70844701 | None:intergenic | 70.0% | |
| ! | ACGGAGGTGGTGGCCGGTGG+TGG | + | chr1_4:70844420-70844439 | Msa0182370:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 70842144 | 70849468 | 70842144 | ID=Msa0182370;Name=Msa0182370 |
| chr1_4 | mRNA | 70842144 | 70849468 | 70842144 | ID=Msa0182370-mRNA-1;Parent=Msa0182370;Name=Msa0182370-mRNA-1;_AED=0.15;_eAED=0.15;_QI=80|0.88|0.9|1|0.77|0.9|10|407|334 |
| chr1_4 | exon | 70842144 | 70842412 | 70842144 | ID=Msa0182370-mRNA-1:exon:23732;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70842505 | 70842515 | 70842505 | ID=Msa0182370-mRNA-1:exon:23733;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70843758 | 70843818 | 70843758 | ID=Msa0182370-mRNA-1:exon:23734;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70844759 | 70844812 | 70844759 | ID=Msa0182370-mRNA-1:exon:23735;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70845051 | 70845207 | 70845051 | ID=Msa0182370-mRNA-1:exon:23736;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70845299 | 70845386 | 70845299 | ID=Msa0182370-mRNA-1:exon:23737;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70846775 | 70846884 | 70846775 | ID=Msa0182370-mRNA-1:exon:23738;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70847468 | 70847574 | 70847468 | ID=Msa0182370-mRNA-1:exon:23739;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70848750 | 70848860 | 70848750 | ID=Msa0182370-mRNA-1:exon:23740;Parent=Msa0182370-mRNA-1 |
| chr1_4 | exon | 70848945 | 70849468 | 70848945 | ID=Msa0182370-mRNA-1:exon:23741;Parent=Msa0182370-mRNA-1 |
| chr1_4 | five_prime_UTR | 70842144 | 70842223 | 70842144 | ID=Msa0182370-mRNA-1:five_prime_utr;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70842224 | 70842412 | 70842224 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70842505 | 70842515 | 70842505 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70843758 | 70843818 | 70843758 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70844759 | 70844812 | 70844759 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70845051 | 70845207 | 70845051 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70845299 | 70845386 | 70845299 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70846775 | 70846884 | 70846775 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70847468 | 70847574 | 70847468 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70848750 | 70848860 | 70848750 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | CDS | 70848945 | 70849061 | 70848945 | ID=Msa0182370-mRNA-1:cds;Parent=Msa0182370-mRNA-1 |
| chr1_4 | three_prime_UTR | 70849062 | 70849468 | 70849062 | ID=Msa0182370-mRNA-1:three_prime_utr;Parent=Msa0182370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
