Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404520 | XP_013470153.1 | 85.564 | 381 | 7 | 1 | 1 | 333 | 1 | 381 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404520 | A0A072VR82 | 85.564 | 381 | 7 | 1 | 1 | 333 | 1 | 381 | 0.0 | 655 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1384350 | Msa1404520 | 0.808586 | 2.879271e-50 | -8.615850e-47 |
| Msa1392260 | Msa1404520 | 0.814396 | 1.573638e-51 | -8.615850e-47 |
| Msa1404520 | Msa1429900 | 0.808576 | 2.893411e-50 | -8.615850e-47 |
| Msa1404520 | Msa1453320 | 0.815364 | 9.603557e-52 | -8.615850e-47 |
| Msa0647830 | Msa1404520 | 0.824372 | 8.364938e-54 | -8.615850e-47 |
| Msa0658570 | Msa1404520 | 0.800931 | 1.143021e-48 | -8.615850e-47 |
| Msa0689800 | Msa1404520 | 0.812721 | 3.675962e-51 | -8.615850e-47 |
| Msa0690440 | Msa1404520 | 0.812197 | 4.784428e-51 | -8.615850e-47 |
| Msa0722910 | Msa1404520 | 0.807810 | 4.214060e-50 | -8.615850e-47 |
| Msa0723120 | Msa1404520 | 0.804553 | 2.044597e-49 | -8.615850e-47 |
| Msa0724210 | Msa1404520 | 0.814340 | 1.619293e-51 | -8.615850e-47 |
| Msa0735660 | Msa1404520 | 0.800774 | 1.230604e-48 | -8.615850e-47 |
| Msa0790510 | Msa1404520 | 0.811631 | 6.357764e-51 | -8.615850e-47 |
| Msa0182370 | Msa1404520 | 0.871687 | 5.654217e-67 | -8.615850e-47 |
| Msa0188830 | Msa1404520 | 0.825095 | 5.648846e-54 | -8.615850e-47 |
| Msa1239530 | Msa1404520 | 0.807884 | 4.064673e-50 | -8.615850e-47 |
| Msa1279210 | Msa1404520 | 0.817559 | 3.097203e-52 | -8.615850e-47 |
| Msa1283860 | Msa1404520 | 0.806804 | 6.885419e-50 | -8.615850e-47 |
| Msa0389340 | Msa1404520 | 0.814849 | 1.249065e-51 | -8.615850e-47 |
| Msa0412970 | Msa1404520 | 0.821168 | 4.659579e-53 | -8.615850e-47 |
| Msa0440400 | Msa1404520 | 0.815770 | 7.795678e-52 | -8.615850e-47 |
| Msa1003620 | Msa1404520 | 0.802911 | 4.480549e-49 | -8.615850e-47 |
| Msa1014540 | Msa1404520 | 0.803508 | 3.370738e-49 | -8.615850e-47 |
| Msa1046460 | Msa1404520 | 0.802249 | 6.137528e-49 | -8.615850e-47 |
| Msa1082500 | Msa1404520 | 0.811292 | 7.532397e-51 | -8.615850e-47 |
| Msa0270100 | Msa1404520 | 0.802351 | 5.846717e-49 | -8.615850e-47 |
| Msa1116130 | Msa1404520 | -0.801566 | 8.475120e-49 | -8.615850e-47 |
| Msa1162550 | Msa1404520 | -0.804340 | 2.264614e-49 | -8.615850e-47 |
| Msa1194920 | Msa1404520 | 0.814009 | 1.915733e-51 | -8.615850e-47 |
| Msa0553460 | Msa1404520 | 0.820071 | 8.323808e-53 | -8.615850e-47 |
| Msa0843260 | Msa1404520 | 0.840461 | 8.573089e-58 | -8.615850e-47 |
| Msa0930390 | Msa1404520 | 0.817443 | 3.288814e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404520 | MtrunA17_Chr1g0209221 | 85.564 | 381 | 7 | 1 | 1 | 333 | 1 | 381 | 0.0 | 655 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404520 | AT2G01220.2 | 59.896 | 384 | 103 | 2 | 1 | 333 | 1 | 384 | 1.52e-165 | 467 |
| Msa1404520 | AT2G01220.1 | 59.791 | 383 | 104 | 2 | 1 | 333 | 1 | 383 | 1.11e-164 | 464 |
| Msa1404520 | AT3G27610.1 | 55.065 | 385 | 121 | 3 | 1 | 333 | 1 | 385 | 2.16e-151 | 431 |
| Msa1404520 | AT3G27610.3 | 61.029 | 272 | 102 | 2 | 66 | 333 | 3 | 274 | 2.80e-123 | 355 |
| Msa1404520 | AT3G27610.5 | 61.029 | 272 | 102 | 2 | 66 | 333 | 3 | 274 | 2.80e-123 | 355 |
| Msa1404520 | AT3G27610.8 | 61.029 | 272 | 102 | 2 | 66 | 333 | 3 | 274 | 2.80e-123 | 355 |
| Msa1404520 | AT3G27610.2 | 60.886 | 271 | 102 | 2 | 67 | 333 | 43 | 313 | 5.95e-122 | 353 |
| Msa1404520 | AT3G27610.4 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
| Msa1404520 | AT3G27610.7 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
| Msa1404520 | AT3G27610.6 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
| Msa1404520 | AT3G27610.9 | 60.886 | 271 | 102 | 2 | 67 | 333 | 47 | 317 | 2.22e-121 | 352 |
Find 94 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCGGAGCTTCTCAGGTTC+TGG | 0.181157 | tig0023067:-69945 | Msa1404520:CDS |
| TTAACTATACCACTTCTAAA+TGG | 0.256565 | tig0023067:+67048 | None:intergenic |
| GAATGTAGATGGTGCATTTA+AGG | 0.263029 | tig0023067:-63406 | Msa1404520:intron |
| CTCTTGTTGGGATTTGTAAC+TGG | 0.295115 | tig0023067:-62878 | Msa1404520:three_prime_UTR |
| AATGTCTCTGATTCAGTTAC+TGG | 0.301982 | tig0023067:-69858 | Msa1404520:CDS |
| ATCAGAGACATTCTAGAATA+AGG | 0.322427 | tig0023067:+69869 | None:intergenic |
| AATACTCATGCACAAATATA+AGG | 0.325904 | tig0023067:-62985 | Msa1404520:three_prime_UTR |
| AAGAAGGCTGAACTATTTCC+TGG | 0.340874 | tig0023067:-64739 | Msa1404520:CDS |
| GGCGGAGCTTCTCAGGTTCT+GGG | 0.342045 | tig0023067:-69944 | Msa1404520:CDS |
| GGTTTGTTGCTATCTGTTCC+CGG | 0.354909 | tig0023067:-69923 | Msa1404520:CDS |
| TAGTCCCCATCATAGTATTT+AGG | 0.363349 | tig0023067:+63495 | None:intergenic |
| AATTAAATATACACTCTTGT+TGG | 0.367448 | tig0023067:-62891 | Msa1404520:three_prime_UTR |
| TGCAGACAAACCTCCATTAT+CGG | 0.371975 | tig0023067:-65425 | Msa1404520:CDS |
| ATGCAAGCTTCCGTCATTCT+CGG | 0.372587 | tig0023067:+70025 | None:intergenic |
| GGTTCCTTCCAATGATATTC+CGG | 0.387200 | tig0023067:-67172 | Msa1404520:CDS |
| TTGATCTGAGACACCGATAA+TGG | 0.391288 | tig0023067:+65412 | None:intergenic |
| GAGTGTATATTTAATTCAAT+TGG | 0.400636 | tig0023067:+62898 | None:intergenic |
| ATTAAATATACACTCTTGTT+GGG | 0.403116 | tig0023067:-62890 | Msa1404520:three_prime_UTR |
| CTTGGTGGTTGTAAAGAAAC+AGG | 0.410949 | tig0023067:-63453 | Msa1404520:CDS |
| TGCAAGCTTCCGTCATTCTC+GGG | 0.416275 | tig0023067:+70026 | None:intergenic |
| TCTTGCTGGCGGAGCTTCTC+AGG | 0.417825 | tig0023067:-69951 | Msa1404520:CDS |
| GAGTTAGAGCAACTTATAAA+TGG | 0.417856 | tig0023067:-67093 | Msa1404520:CDS |
| TCTTTCAATCCTTTACATGA+TGG | 0.429935 | tig0023067:-66909 | Msa1404520:CDS |
| CAAGGACAGCTGATCGACTT+TGG | 0.438388 | tig0023067:-68471 | Msa1404520:CDS |
| CTATGCAGCATTTGCGGTGA+TGG | 0.440527 | tig0023067:-65478 | Msa1404520:intron |
| CTTTCAATCCTTTACATGAT+GGG | 0.442953 | tig0023067:-66908 | Msa1404520:CDS |
| ACTCAACTCCGGAATATCAT+TGG | 0.445183 | tig0023067:+67164 | None:intergenic |
| CTGATCGACTTTGGATATCA+AGG | 0.446712 | tig0023067:-68462 | Msa1404520:CDS |
| GTATTGCTTCTACGGCGGTT+CGG | 0.459716 | tig0023067:+70002 | None:intergenic |
| GTGGCTGGTCGGAATGTAGA+TGG | 0.465218 | tig0023067:-63417 | Msa1404520:CDS |
| CAAACCGTTCTCTATCTTGC+TGG | 0.471519 | tig0023067:-69965 | Msa1404520:CDS |
| TTGCAGCCTAAATACTATGA+TGG | 0.482577 | tig0023067:-63501 | Msa1404520:intron |
| TGCAGCCTAAATACTATGAT+GGG | 0.483015 | tig0023067:-63500 | Msa1404520:intron |
| GCGGAACTGTTCAGCTGGAA+TGG | 0.483659 | tig0023067:+63251 | None:intergenic |
| GCACATCTATGCAGCATTTG+CGG | 0.486089 | tig0023067:-65484 | Msa1404520:intron |
| AACAAGATGCTGAAGATACT+TGG | 0.487034 | tig0023067:-63471 | Msa1404520:CDS |
| TCCTCTTTGAAACTATGAAA+AGG | 0.490320 | tig0023067:+63032 | None:intergenic |
| AGATAGAGAACGGTTTGGTA+TGG | 0.507910 | tig0023067:+69971 | None:intergenic |
| TCTGATTCAGTTACTGGGCA+AGG | 0.510772 | tig0023067:-69852 | Msa1404520:intron |
| AACGGCTTCAAGAACAGTAT+TGG | 0.513679 | tig0023067:+69895 | None:intergenic |
| GGATGCACCTTCCTTGTGGC+TGG | 0.519870 | tig0023067:-63432 | Msa1404520:CDS |
| TCCATGCGGAACTGTTCAGC+TGG | 0.520712 | tig0023067:+63246 | None:intergenic |
| CAATAAAAGTTACCACAAGT+TGG | 0.521697 | tig0023067:+62812 | None:intergenic |
| AGAGGAGTGTATTGCTTCTA+CGG | 0.529778 | tig0023067:+69994 | None:intergenic |
| ACAAATCCGCAATATAAAAG+TGG | 0.530865 | tig0023067:-63134 | Msa1404520:three_prime_UTR |
| AAGAACAGTATTGGAAGCAC+CGG | 0.533288 | tig0023067:+69904 | None:intergenic |
| GAAAGGAAAATAATACTGCC+TGG | 0.537291 | tig0023067:-66933 | Msa1404520:CDS |
| AAGATTTATCCATTTAGAAG+TGG | 0.537829 | tig0023067:-67057 | Msa1404520:intron |
| CAAAGAGGAGTCGTGTGTGT+TGG | 0.538913 | tig0023067:-63018 | Msa1404520:three_prime_UTR |
| CAGCAAGATAGAGAACGGTT+TGG | 0.539013 | tig0023067:+69966 | None:intergenic |
| ATTCTCGGGTTAATTGTAAG+TGG | 0.540737 | tig0023067:+70040 | None:intergenic |
| TGCGGATTTGTGCTTCATGA+AGG | 0.542304 | tig0023067:+63146 | None:intergenic |
| ATCAAGGGTGACCTTGACTA+AGG | 0.543834 | tig0023067:-68446 | Msa1404520:intron |
| TGATGGGCATATCAAGCTCA+TGG | 0.544631 | tig0023067:-66892 | Msa1404520:CDS |
| AATATACTAAAATTCAAGAA+TGG | 0.545658 | tig0023067:+62956 | None:intergenic |
| TTCTCGGGTTAATTGTAAGT+GGG | 0.554404 | tig0023067:+70041 | None:intergenic |
| TTGATATGCCCATCATGTAA+AGG | 0.555036 | tig0023067:+66900 | None:intergenic |
| TATGCAGCATTTGCGGTGAT+GGG | 0.555470 | tig0023067:-65477 | Msa1404520:intron |
| GCACCTTCCTTGTGGCTGGT+CGG | 0.555628 | tig0023067:-63428 | Msa1404520:CDS |
| GTACTCGAGAAGAAGAAGAC+AGG | 0.555650 | tig0023067:-67477 | Msa1404520:CDS |
| GGCTATTGCAAATGCATGCA+AGG | 0.557504 | tig0023067:-67193 | Msa1404520:CDS |
| TTTCAGAGATACCAGCAGAA+AGG | 0.561633 | tig0023067:-66950 | Msa1404520:intron |
| GTTCGATGAACATAAAACCT+TGG | 0.562493 | tig0023067:+63058 | None:intergenic |
| TACACACCTTGAGCAAAAGA+TGG | 0.582043 | tig0023067:+67446 | None:intergenic |
| TGTAAAGGATTGAAAGAACC+AGG | 0.585182 | tig0023067:+66915 | None:intergenic |
| CCAATTACAAAAGCACTGCC+AGG | 0.591748 | tig0023067:+64721 | None:intergenic |
| TACAATTAACCCGAGAATGA+CGG | 0.594198 | tig0023067:-70035 | Msa1404520:exon |
| TGTTGACTACAAAACTGAGA+TGG | 0.598301 | tig0023067:+69735 | None:intergenic |
| ATGTCTCTGATTCAGTTACT+GGG | 0.600917 | tig0023067:-69857 | Msa1404520:CDS |
| ACCGTTCTCTATCTTGCTGG+CGG | 0.601927 | tig0023067:-69962 | Msa1404520:CDS |
| AGCTCATGGAAGTTGCAACC+CGG | 0.605279 | tig0023067:-66878 | Msa1404520:intron |
| GAGAACGGTTTGGTATGGAG+AGG | 0.609234 | tig0023067:+69976 | None:intergenic |
| AACAGGATGCACCTTCCTTG+TGG | 0.612787 | tig0023067:-63436 | Msa1404520:CDS |
| ACATCTGATTCACTCAACTC+CGG | 0.616929 | tig0023067:+67153 | None:intergenic |
| TCCAGCTGAACAGTTCCGCA+TGG | 0.617440 | tig0023067:-63247 | Msa1404520:CDS |
| AACTCCGGAATATCATTGGA+AGG | 0.620571 | tig0023067:+67168 | None:intergenic |
| TGATCGACTTTGGATATCAA+GGG | 0.621563 | tig0023067:-68461 | Msa1404520:CDS |
| TGGGATTTGTAACTGGTGTG+TGG | 0.622560 | tig0023067:-62871 | Msa1404520:three_prime_UTR |
| ATCTGAGACACCGATAATGG+AGG | 0.627893 | tig0023067:+65415 | None:intergenic |
| ATTCCGACCAGCCACAAGGA+AGG | 0.629562 | tig0023067:+63425 | None:intergenic |
| AGATAACAGTACCTTAGTCA+AGG | 0.631491 | tig0023067:+68435 | None:intergenic |
| TCCGCCAGCAAGATAGAGAA+CGG | 0.634589 | tig0023067:+69961 | None:intergenic |
| AAACGACATAGTAATGTCGA+TGG | 0.650992 | tig0023067:+70073 | None:intergenic |
| GGAGTGTATTGCTTCTACGG+CGG | 0.655091 | tig0023067:+69997 | None:intergenic |
| TACTCGAGAAGAAGAAGACA+GGG | 0.658022 | tig0023067:-67476 | Msa1404520:CDS |
| TTGGTCTGGTTGCCAACTTG+TGG | 0.659440 | tig0023067:-62824 | Msa1404520:three_prime_UTR |
| CTACATTCCGACCAGCCACA+AGG | 0.664799 | tig0023067:+63421 | None:intergenic |
| AGAACAGTATTGGAAGCACC+GGG | 0.667991 | tig0023067:+69905 | None:intergenic |
| ACCGCAGATAGTTCAAAACA+AGG | 0.670657 | tig0023067:+65451 | None:intergenic |
| CATTCTAGAATAAGGAACAA+CGG | 0.672244 | tig0023067:+69877 | None:intergenic |
| GCAGCCTAAATACTATGATG+GGG | 0.673324 | tig0023067:-63499 | Msa1404520:intron |
| AAGATGCTGAAGATACTTGG+TGG | 0.689804 | tig0023067:-63468 | Msa1404520:CDS |
| CAGTAGAGGATATATCCATG+CGG | 0.761286 | tig0023067:+63232 | None:intergenic |
| TTGGTGCTGACACAGCAGTG+AGG | 0.763503 | tig0023067:-64702 | Msa1404520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTACATTTCTTAAAAA+TGG | - | tig0023067:63483-63502 | Msa1404520:CDS | 10.0% |
| !!! | TTTGCTAAATATTTTAATTT+AGG | - | tig0023067:65392-65411 | Msa1404520:CDS | 10.0% |
| !!! | TTGCTAAATATTTTAATTTA+GGG | - | tig0023067:65393-65412 | Msa1404520:CDS | 10.0% |
| !!! | ATTGATAATTTTTTATTCTT+TGG | - | tig0023067:65925-65944 | Msa1404520:intron | 10.0% |
| !! | ATGATAAAAAACAAAAACAA+AGG | + | tig0023067:63119-63138 | None:intergenic | 15.0% |
| !! | TATAAAATTAGCGTATATAT+AGG | - | tig0023067:63310-63329 | Msa1404520:intron | 15.0% |
| !!! | TTTATATTTTATAATCCAAG+TGG | + | tig0023067:63855-63874 | None:intergenic | 15.0% |
| !! | AAAAGTAAATAAATTGGAAA+GGG | + | tig0023067:64636-64655 | None:intergenic | 15.0% |
| !!! | TGCTAAATATTTTAATTTAG+GGG | - | tig0023067:65394-65413 | Msa1404520:CDS | 15.0% |
| !! | ATTTAAACAAATATGAAGAA+AGG | + | tig0023067:65637-65656 | None:intergenic | 15.0% |
| !!! | TGTTCTTTTTAATCTTTAAA+TGG | - | tig0023067:66231-66250 | Msa1404520:intron | 15.0% |
| !!! | GTTCTTTTTAATCTTTAAAT+GGG | - | tig0023067:66232-66251 | Msa1404520:intron | 15.0% |
| !! | TATAATAAGAAAAAAAGAGA+AGG | + | tig0023067:66608-66627 | None:intergenic | 15.0% |
| !! | TTGAATAAAACCTATAAAAA+AGG | - | tig0023067:66903-66922 | Msa1404520:CDS | 15.0% |
| !! | TATAACATAAATGATGAAAT+CGG | - | tig0023067:67004-67023 | Msa1404520:intron | 15.0% |
| !!! | GATAACTAATATTAACATTT+TGG | + | tig0023067:67098-67117 | None:intergenic | 15.0% |
| !! | AAAGAAATAACTTATCATAT+AGG | - | tig0023067:67139-67158 | Msa1404520:CDS | 15.0% |
| !! | AAGAAATAACTTATCATATA+GGG | - | tig0023067:67140-67159 | Msa1404520:CDS | 15.0% |
| !! | GATATTCAAATATCATTAAT+TGG | - | tig0023067:67219-67238 | Msa1404520:intron | 15.0% |
| !! | ACAAAACAAAAAAATCATAT+GGG | + | tig0023067:68377-68396 | None:intergenic | 15.0% |
| !! | AACAAAACAAAAAAATCATA+TGG | + | tig0023067:68378-68397 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTTTTGTTTTTG+TGG | - | tig0023067:68382-68401 | Msa1404520:intron | 15.0% |
| !! | GTTTAATTATATTCCTAAAA+TGG | - | tig0023067:68527-68546 | Msa1404520:intron | 15.0% |
| !!! | TTATTTTTCAAATGTTATTG+AGG | - | tig0023067:69556-69575 | Msa1404520:intron | 15.0% |
| !! | AATATACTAAAATTCAAGAA+TGG | + | tig0023067:69945-69964 | None:intergenic | 15.0% |
| !! | TTTCAAAGGAAAAAAAAAAT+TGG | - | tig0023067:70055-70074 | Msa1404520:five_prime_UTR | 15.0% |
| !!! | TTTTGTTTTTTATCATTCGT+TGG | - | tig0023067:63123-63142 | Msa1404520:three_prime_UTR | 20.0% |
| !!! | ATACGCTAATTTTATAACAA+AGG | + | tig0023067:63306-63325 | None:intergenic | 20.0% |
| !! | AAATAAGCTGAAATTGAATA+AGG | + | tig0023067:63522-63541 | None:intergenic | 20.0% |
| !! | TAAACAGAAAAATTACTTTG+AGG | + | tig0023067:63642-63661 | None:intergenic | 20.0% |
| !!! | CAAAGTAATTTTTCTGTTTA+AGG | - | tig0023067:63642-63661 | Msa1404520:intron | 20.0% |
| !!! | TTTTGTAGATCAATTTTTGT+TGG | - | tig0023067:63774-63793 | Msa1404520:intron | 20.0% |
| !! | AATATAAAAACTTGTGTTTC+AGG | - | tig0023067:63867-63886 | Msa1404520:intron | 20.0% |
| !! | ATGATTACTAAAACAATTTG+AGG | + | tig0023067:63972-63991 | None:intergenic | 20.0% |
| !!! | GAATGTATATTTTTCCTAAA+TGG | - | tig0023067:64100-64119 | Msa1404520:intron | 20.0% |
| !! | TTAAACAAAAATAAATCCAG+AGG | + | tig0023067:64236-64255 | None:intergenic | 20.0% |
| !! | TTAATTCAAATTCATGACTT+TGG | - | tig0023067:64252-64271 | Msa1404520:intron | 20.0% |
| !!! | GTTTGTTGTTCAAATAAAAA+AGG | + | tig0023067:64608-64627 | None:intergenic | 20.0% |
| !! | CAAAAGTAAATAAATTGGAA+AGG | + | tig0023067:64637-64656 | None:intergenic | 20.0% |
| !!! | CTTTCCAATTTATTTACTTT+TGG | - | tig0023067:64635-64654 | Msa1404520:intron | 20.0% |
| !! | GTTTCCAAAAGTAAATAAAT+TGG | + | tig0023067:64642-64661 | None:intergenic | 20.0% |
| !! | TAACATCAGATAGAAAATTA+CGG | - | tig0023067:64813-64832 | Msa1404520:intron | 20.0% |
| !! | AAATATTCATTATGTTTGTG+TGG | + | tig0023067:65356-65375 | None:intergenic | 20.0% |
| !! | TCTAATGCATAATCTTATAA+AGG | + | tig0023067:65555-65574 | None:intergenic | 20.0% |
| !!! | AAATTGTTTTTCACATTCAT+CGG | + | tig0023067:65773-65792 | None:intergenic | 20.0% |
| !! | TGAAATTAACATGTGTAAAA+CGG | - | tig0023067:66535-66554 | Msa1404520:intron | 20.0% |
| !! | ATTATATGTGAAAACTACAA+AGG | - | tig0023067:66622-66641 | Msa1404520:intron | 20.0% |
| !! | TTATATGTGAAAACTACAAA+GGG | - | tig0023067:66623-66642 | Msa1404520:intron | 20.0% |
| !!! | GGTTTTATTCAATGAAATTT+GGG | + | tig0023067:66895-66914 | None:intergenic | 20.0% |
| !!! | AGGTTTTATTCAATGAAATT+TGG | + | tig0023067:66896-66915 | None:intergenic | 20.0% |
| !!! | GTTGACATTTTATAACATAA+AGG | - | tig0023067:66934-66953 | Msa1404520:CDS | 20.0% |
| !! | TCATCATTTATGTTATAATG+AGG | + | tig0023067:67001-67020 | None:intergenic | 20.0% |
| !! | ATAACATAAATGATGAAATC+GGG | - | tig0023067:67005-67024 | Msa1404520:intron | 20.0% |
| !! | GTTACCTAAAATTAAGTTAA+AGG | - | tig0023067:67054-67073 | Msa1404520:intron | 20.0% |
| !!! | TAGTCCTTTAACTTAATTTT+AGG | + | tig0023067:67061-67080 | None:intergenic | 20.0% |
| !!! | TCTCTTTTGAAAGTATAATT+AGG | - | tig0023067:67310-67329 | Msa1404520:intron | 20.0% |
| !!! | TCTGTTATACTATTTTATGA+AGG | - | tig0023067:67576-67595 | Msa1404520:intron | 20.0% |
| !!! | TTCTATTTTTATGCTTAACA+GGG | - | tig0023067:67608-67627 | Msa1404520:intron | 20.0% |
| !! | TGTACCATATATTATGTAAT+TGG | - | tig0023067:67648-67667 | Msa1404520:intron | 20.0% |
| !! | ATTGCCAATTACATAATATA+TGG | + | tig0023067:67655-67674 | None:intergenic | 20.0% |
| !!! | AACAATCAAGTATTGAAAAA+TGG | + | tig0023067:68290-68309 | None:intergenic | 20.0% |
| !! | CAATTATGTTTAACAAAAGT+CGG | + | tig0023067:68554-68573 | None:intergenic | 20.0% |
| !!! | GAAAAGATCAATTCTAATTT+TGG | - | tig0023067:69528-69547 | Msa1404520:intron | 20.0% |
| !!! | GTGGGATTTAAATATTTTTA+TGG | - | tig0023067:69704-69723 | Msa1404520:intron | 20.0% |
| !!! | TTAAATATTTTTATGGCTGA+AGG | - | tig0023067:69711-69730 | Msa1404520:intron | 20.0% |
| !! | GAGTGTATATTTAATTCAAT+TGG | + | tig0023067:70003-70022 | None:intergenic | 20.0% |
| !! | AATTAAATATACACTCTTGT+TGG | - | tig0023067:70007-70026 | Msa1404520:CDS | 20.0% |
| !! | ATTAAATATACACTCTTGTT+GGG | - | tig0023067:70008-70027 | Msa1404520:CDS | 20.0% |
| ! | TGATGAAATTGAAGATGAAA+AGG | + | tig0023067:63078-63097 | None:intergenic | 25.0% |
| ! | ACAAAAACAAAGGTAAAAGT+GGG | + | tig0023067:63109-63128 | None:intergenic | 25.0% |
| ! | AACAAAAACAAAGGTAAAAG+TGG | + | tig0023067:63110-63129 | None:intergenic | 25.0% |
| !!! | TTATCATTCGTTGGTTTTTT+TGG | - | tig0023067:63132-63151 | Msa1404520:three_prime_UTR | 25.0% |
| !!! | TGCATTTTTTGTTGTTGATT+AGG | - | tig0023067:63382-63401 | Msa1404520:intron | 25.0% |
| ! | TCAATTTCAGCTTATTTGTA+AGG | - | tig0023067:63525-63544 | Msa1404520:intron | 25.0% |
| ! | ACGACTGTAATTAGTTAATA+AGG | - | tig0023067:63946-63965 | Msa1404520:intron | 25.0% |
| ! | AGCAAATAATCAATAACAAG+AGG | + | tig0023067:64067-64086 | None:intergenic | 25.0% |
| ! | TAGGAAAAATATACATTCAC+AGG | + | tig0023067:64098-64117 | None:intergenic | 25.0% |
| ! | TTCACCAAAAATCATATATG+GGG | + | tig0023067:64354-64373 | None:intergenic | 25.0% |
| ! | CTTCACCAAAAATCATATAT+GGG | + | tig0023067:64355-64374 | None:intergenic | 25.0% |
| ! | TCTTCACCAAAAATCATATA+TGG | + | tig0023067:64356-64375 | None:intergenic | 25.0% |
| !! | GTAGATTTTATATGTCAACA+AGG | - | tig0023067:64409-64428 | Msa1404520:intron | 25.0% |
| ! | TTAAGAAAGCTTACAATCAT+CGG | - | tig0023067:64770-64789 | Msa1404520:CDS | 25.0% |
| !! | ATATCCTCACATTTCATTTT+TGG | + | tig0023067:64962-64981 | None:intergenic | 25.0% |
| ! | GAACAATAAAATGGAAGATT+TGG | - | tig0023067:65172-65191 | Msa1404520:intron | 25.0% |
| ! | TATAGAACTACTTAATCAGT+AGG | + | tig0023067:65241-65260 | None:intergenic | 25.0% |
| !! | CTGATTAAGTAGTTCTATAA+AGG | - | tig0023067:65242-65261 | Msa1404520:intron | 25.0% |
| !! | CCAGTTATCTTTTACAAATA+CGG | + | tig0023067:65304-65323 | None:intergenic | 25.0% |
| ! | CGTATTTGTAAAAGATAACT+GGG | - | tig0023067:65302-65321 | Msa1404520:intron | 25.0% |
| !! | TATTCCTGATCTCATTTTAT+GGG | + | tig0023067:65589-65608 | None:intergenic | 25.0% |
| !! | ATATTCCTGATCTCATTTTA+TGG | + | tig0023067:65590-65609 | None:intergenic | 25.0% |
| ! | AAAATGAGATCAGGAATATT+TGG | - | tig0023067:65591-65610 | Msa1404520:intron | 25.0% |
| ! | AAGATTTATCCATTTAGAAG+TGG | - | tig0023067:65841-65860 | Msa1404520:intron | 25.0% |
| ! | TTAACTATACCACTTCTAAA+TGG | + | tig0023067:65853-65872 | None:intergenic | 25.0% |
| !!! | ATAATATTGTTTCTGCACAA+AGG | + | tig0023067:65877-65896 | None:intergenic | 25.0% |
| ! | CTCTAATGTCATAATGAAAT+TGG | + | tig0023067:66405-66424 | None:intergenic | 25.0% |
| ! | CAATTTCATTATGACATTAG+AGG | - | tig0023067:66403-66422 | Msa1404520:intron | 25.0% |
| ! | TAATTAATATAACCGTGTCT+TGG | - | tig0023067:66427-66446 | Msa1404520:intron | 25.0% |
| !! | TCTAACAATCACTCTTTTAT+TGG | - | tig0023067:66511-66530 | Msa1404520:intron | 25.0% |
| !! | CTAACAATCACTCTTTTATT+GGG | - | tig0023067:66512-66531 | Msa1404520:intron | 25.0% |
| ! | GAAATTAACATGTGTAAAAC+GGG | - | tig0023067:66536-66555 | Msa1404520:intron | 25.0% |
| ! | GCTATTTACTGAAAAATGTT+AGG | - | tig0023067:66671-66690 | Msa1404520:intron | 25.0% |
| ! | ATAACATCAAGGATTAAATC+AGG | + | tig0023067:66761-66780 | None:intergenic | 25.0% |
| ! | GTTACGTAATAATAACATCA+AGG | + | tig0023067:66772-66791 | None:intergenic | 25.0% |
| ! | TGTTTGTATGATGAAGATTT+GGG | + | tig0023067:66866-66885 | None:intergenic | 25.0% |
| ! | ATGTTTGTATGATGAAGATT+TGG | + | tig0023067:66867-66886 | None:intergenic | 25.0% |
| !!! | ACACTGATATCCTTTTTTAT+AGG | + | tig0023067:66916-66935 | None:intergenic | 25.0% |
| ! | TCATATAGGGCTAATAATAA+AGG | - | tig0023067:67153-67172 | Msa1404520:CDS | 25.0% |
| ! | ATCAGTTATATGTATGATGA+TGG | - | tig0023067:67333-67352 | Msa1404520:intron | 25.0% |
| !! | GTTATACTATTTTATGAAGG+AGG | - | tig0023067:67579-67598 | Msa1404520:intron | 25.0% |
| ! | TAAGCATAAAAATAGAAGCA+GGG | + | tig0023067:67605-67624 | None:intergenic | 25.0% |
| ! | TTAAGCATAAAAATAGAAGC+AGG | + | tig0023067:67606-67625 | None:intergenic | 25.0% |
| !!! | CTTCTATTTTTATGCTTAAC+AGG | - | tig0023067:67607-67626 | Msa1404520:intron | 25.0% |
| ! | AATATGTTATAGTGAAGAGT+AGG | - | tig0023067:67756-67775 | Msa1404520:intron | 25.0% |
| ! | AGATTCAGTTAGATAAATAC+AGG | - | tig0023067:67829-67848 | Msa1404520:intron | 25.0% |
| ! | GATTCAGTTAGATAAATACA+GGG | - | tig0023067:67830-67849 | Msa1404520:intron | 25.0% |
| ! | AGAATGAACAAATCTAAACA+GGG | + | tig0023067:67957-67976 | None:intergenic | 25.0% |
| ! | TAGAATGAACAAATCTAAAC+AGG | + | tig0023067:67958-67977 | None:intergenic | 25.0% |
| ! | AGTGATGAAAAATAGAGAAA+TGG | + | tig0023067:67995-68014 | None:intergenic | 25.0% |
| ! | CTTATAAAAATAAGGCTGAT+TGG | + | tig0023067:68142-68161 | None:intergenic | 25.0% |
| !!! | TCAGCCTTATTTTTATAAGA+AGG | - | tig0023067:68143-68162 | Msa1404520:intron | 25.0% |
| ! | TCAGCCTTCTTATAAAAATA+AGG | + | tig0023067:68150-68169 | None:intergenic | 25.0% |
| !! | TTCAATACTTGATTGTTTCT+AGG | - | tig0023067:68293-68312 | Msa1404520:intron | 25.0% |
| !!! | TCAATACTTGATTGTTTCTA+GGG | - | tig0023067:68294-68313 | Msa1404520:intron | 25.0% |
| ! | TTTGTCCAAAACATTAATTG+AGG | - | tig0023067:68624-68643 | Msa1404520:intron | 25.0% |
| ! | AAAACATTAATTGAGGTTCT+GGG | - | tig0023067:68631-68650 | Msa1404520:intron | 25.0% |
| ! | TGTCCTAAACATTAGTATAT+AGG | - | tig0023067:68957-68976 | Msa1404520:intron | 25.0% |
| !!! | TCTATCAAGTTTTATGAAGA+TGG | - | tig0023067:68986-69005 | Msa1404520:intron | 25.0% |
| ! | ATGTTGAAATATCACATAAG+AGG | - | tig0023067:69057-69076 | Msa1404520:intron | 25.0% |
| ! | ATATGGTGATTGAGTTAATT+GGG | - | tig0023067:69104-69123 | Msa1404520:intron | 25.0% |
| ! | ATTATGTCTACAAATTTCAG+AGG | - | tig0023067:69195-69214 | Msa1404520:intron | 25.0% |
| !! | AGAATTGATCTTTTCTATTG+CGG | + | tig0023067:69523-69542 | None:intergenic | 25.0% |
| !!! | TTTTAAAATGTAGAGGAACA+AGG | + | tig0023067:69793-69812 | None:intergenic | 25.0% |
| ! | AATACTCATGCACAAATATA+AGG | - | tig0023067:69913-69932 | Msa1404520:CDS | 25.0% |
| ! | AAGGAAAAAAAAAATTGGTC+TGG | - | tig0023067:70060-70079 | Msa1404520:five_prime_UTR | 25.0% |
| !! | TTGTGGTAACTTTTATTGAA+GGG | - | tig0023067:70091-70110 | Msa1404520:five_prime_UTR | 25.0% |
| !! | CATTCTAGAATAAGGAACAA+CGG | + | tig0023067:63024-63043 | None:intergenic | 30.0% |
| !! | ATCAGAGACATTCTAGAATA+AGG | + | tig0023067:63032-63051 | None:intergenic | 30.0% |
| AAGCTGAAATTGAATAAGGT+GGG | + | tig0023067:63518-63537 | None:intergenic | 30.0% | |
| TAAGCTGAAATTGAATAAGG+TGG | + | tig0023067:63519-63538 | None:intergenic | 30.0% | |
| TGACATGTTCAAACATAAAC+TGG | + | tig0023067:63597-63616 | None:intergenic | 30.0% | |
| ! | AACCTTTTGTAATGAGAACA+GGG | - | tig0023067:63745-63764 | Msa1404520:intron | 30.0% |
| TCGTTATAAATCTTATGTGG+TGG | + | tig0023067:64023-64042 | None:intergenic | 30.0% | |
| ACCACATAAGATTTATAACG+AGG | - | tig0023067:64022-64041 | Msa1404520:intron | 30.0% | |
| TCCTCGTTATAAATCTTATG+TGG | + | tig0023067:64026-64045 | None:intergenic | 30.0% | |
| ! | AACGCACTTTTATACAGTTA+AGG | + | tig0023067:64197-64216 | None:intergenic | 30.0% |
| TCACCAAAAATCATATATGG+GGG | + | tig0023067:64353-64372 | None:intergenic | 30.0% | |
| TGTGTACATGATATTATCAC+AGG | + | tig0023067:64529-64548 | None:intergenic | 30.0% | |
| TGATAATATCATGTACACAC+AGG | - | tig0023067:64530-64549 | Msa1404520:intron | 30.0% | |
| ! | TCAAATAAAAAAGGTGCAGT+TGG | + | tig0023067:64599-64618 | None:intergenic | 30.0% |
| AACAAGAAACTGAAAGGTTT+AGG | + | tig0023067:64664-64683 | None:intergenic | 30.0% | |
| AACAGAAACAAGAAACTGAA+AGG | + | tig0023067:64670-64689 | None:intergenic | 30.0% | |
| AACACCAAAAATGAAATGTG+AGG | - | tig0023067:64955-64974 | Msa1404520:intron | 30.0% | |
| !! | GTTTGTTGTCCAATTGAAAA+AGG | - | tig0023067:65275-65294 | Msa1404520:intron | 30.0% |
| CCGTATTTGTAAAAGATAAC+TGG | - | tig0023067:65301-65320 | Msa1404520:intron | 30.0% | |
| TATTCATTATGTTTGTGTGG+TGG | + | tig0023067:65353-65372 | None:intergenic | 30.0% | |
| GCTAGTTATTTGCATTTACA+TGG | - | tig0023067:65510-65529 | Msa1404520:intron | 30.0% | |
| TTCTTACTATGTTCTGTTCT+AGG | - | tig0023067:65684-65703 | Msa1404520:intron | 30.0% | |
| GAGTTAGAGCAACTTATAAA+TGG | - | tig0023067:65805-65824 | Msa1404520:intron | 30.0% | |
| ! | AGTATTATTTTCCTTTCTGC+TGG | + | tig0023067:65962-65981 | None:intergenic | 30.0% |
| TCTTTCAATCCTTTACATGA+TGG | - | tig0023067:65989-66008 | Msa1404520:intron | 30.0% | |
| CTTTCAATCCTTTACATGAT+GGG | - | tig0023067:65990-66009 | Msa1404520:intron | 30.0% | |
| TACTTCTGTCAAAAGAACAT+GGG | + | tig0023067:66054-66073 | None:intergenic | 30.0% | |
| ATACTTCTGTCAAAAGAACA+TGG | + | tig0023067:66055-66074 | None:intergenic | 30.0% | |
| TCTTGGAACATATGAAGTTA+AGG | - | tig0023067:66444-66463 | Msa1404520:intron | 30.0% | |
| AAGTTAAGGTTAACTACATG+AGG | - | tig0023067:66458-66477 | Msa1404520:intron | 30.0% | |
| ! | ATGTGTAAAACGGGTATTTT+AGG | - | tig0023067:66545-66564 | Msa1404520:intron | 30.0% |
| !! | AAAGGGTGCTCTTATAAAAA+GGG | - | tig0023067:66640-66659 | Msa1404520:intron | 30.0% |
| TCGTCTCTTAACTTAATTTC+AGG | - | tig0023067:66708-66727 | Msa1404520:intron | 30.0% | |
| TCGCGAAAAAAAGAAGATAA+AGG | - | tig0023067:66963-66982 | Msa1404520:intron | 30.0% | |
| GTCAACCAATTTGAAAAAGT+TGG | - | tig0023067:67516-67535 | Msa1404520:intron | 30.0% | |
| !!! | TCTCACCAACTTTTTCAAAT+TGG | + | tig0023067:67524-67543 | None:intergenic | 30.0% |
| ! | CAGATGATCTTTAAAAACCA+AGG | + | tig0023067:67560-67579 | None:intergenic | 30.0% |
| TAATATATGGTACATCAGAG+AGG | + | tig0023067:67642-67661 | None:intergenic | 30.0% | |
| AAGTCATTTACAACTTTAGG+TGG | + | tig0023067:68084-68103 | None:intergenic | 30.0% | |
| GAGAAGTCATTTACAACTTT+AGG | + | tig0023067:68087-68106 | None:intergenic | 30.0% | |
| !! | ATCAAGTATTGAAAAATGGC+AGG | + | tig0023067:68286-68305 | None:intergenic | 30.0% |
| AATCATATGGGATAGTAACA+TGG | + | tig0023067:68365-68384 | None:intergenic | 30.0% | |
| ACAAATTGACACACAGTTTA+AGG | + | tig0023067:68493-68512 | None:intergenic | 30.0% | |
| AATAGCAATTTCAATGTGCT+AGG | + | tig0023067:68606-68625 | None:intergenic | 30.0% | |
| ! | CAGAACCTCAATTAATGTTT+TGG | + | tig0023067:68632-68651 | None:intergenic | 30.0% |
| CAAAACATTAATTGAGGTTC+TGG | - | tig0023067:68630-68649 | Msa1404520:intron | 30.0% | |
| TCAAATACACAATGAGATGA+TGG | - | tig0023067:68773-68792 | Msa1404520:intron | 30.0% | |
| ! | TGATCTCTTTTTGGATCTAT+TGG | + | tig0023067:68807-68826 | None:intergenic | 30.0% |
| ! | GACATTCTATGATCTCTTTT+TGG | + | tig0023067:68816-68835 | None:intergenic | 30.0% |
| AAGAGATCATAGAATGTCAT+CGG | - | tig0023067:68818-68837 | Msa1404520:intron | 30.0% | |
| ACAAAGAGTTAGCAAAACTT+AGG | - | tig0023067:68870-68889 | Msa1404520:intron | 30.0% | |
| GTGTGAAAATCTTACATGAA+GGG | + | tig0023067:68903-68922 | None:intergenic | 30.0% | |
| CCACCTATATACTAATGTTT+AGG | + | tig0023067:68963-68982 | None:intergenic | 30.0% | |
| CCTAAACATTAGTATATAGG+TGG | - | tig0023067:68960-68979 | Msa1404520:intron | 30.0% | |
| !! | ATCAAGTTTTATGAAGATGG+AGG | - | tig0023067:68989-69008 | Msa1404520:intron | 30.0% |
| TTCATGTAACAAGATCATGT+GGG | + | tig0023067:69027-69046 | None:intergenic | 30.0% | |
| TTTCATGTAACAAGATCATG+TGG | + | tig0023067:69028-69047 | None:intergenic | 30.0% | |
| GATATGGTGATTGAGTTAAT+TGG | - | tig0023067:69103-69122 | Msa1404520:intron | 30.0% | |
| ACATTTGAGAAATGTCATGT+GGG | + | tig0023067:69151-69170 | None:intergenic | 30.0% | |
| AACATTTGAGAAATGTCATG+TGG | + | tig0023067:69152-69171 | None:intergenic | 30.0% | |
| !!! | AACATGTCTTTTAGTTCTTC+AGG | + | tig0023067:69622-69641 | None:intergenic | 30.0% |
| ! | TCTTTTTCTAATCTCAGTAG+AGG | + | tig0023067:69683-69702 | None:intergenic | 30.0% |
| ACTGAGATTAGAAAAAGAAG+TGG | - | tig0023067:69685-69704 | Msa1404520:intron | 30.0% | |
| CTGAGATTAGAAAAAGAAGT+GGG | - | tig0023067:69686-69705 | Msa1404520:intron | 30.0% | |
| ACAAATCCGCAATATAAAAG+TGG | - | tig0023067:69764-69783 | Msa1404520:intron | 30.0% | |
| !!! | GCGATTGTTTTAAAATGTAG+AGG | + | tig0023067:69800-69819 | None:intergenic | 30.0% |
| !!! | CTACATTTTAAAACAATCGC+AGG | - | tig0023067:69800-69819 | Msa1404520:intron | 30.0% |
| ! | TCCTTTTCATAGTTTCAAAG+AGG | - | tig0023067:69865-69884 | Msa1404520:CDS | 30.0% |
| !! | TCCTCTTTGAAACTATGAAA+AGG | + | tig0023067:69869-69888 | None:intergenic | 30.0% |
| CAATAAAAGTTACCACAAGT+TGG | + | tig0023067:70089-70108 | None:intergenic | 30.0% | |
| ! | CTTGTGGTAACTTTTATTGA+AGG | - | tig0023067:70090-70109 | Msa1404520:five_prime_UTR | 30.0% |
| AAACGACATAGTAATGTCGA+TGG | + | tig0023067:62828-62847 | None:intergenic | 35.0% | |
| TTCTCGGGTTAATTGTAAGT+GGG | + | tig0023067:62860-62879 | None:intergenic | 35.0% | |
| ATTCTCGGGTTAATTGTAAG+TGG | + | tig0023067:62861-62880 | None:intergenic | 35.0% | |
| TACAATTAACCCGAGAATGA+CGG | - | tig0023067:62863-62882 | Msa1404520:three_prime_UTR | 35.0% | |
| AATGTCTCTGATTCAGTTAC+TGG | - | tig0023067:63040-63059 | Msa1404520:three_prime_UTR | 35.0% | |
| ATGTCTCTGATTCAGTTACT+GGG | - | tig0023067:63041-63060 | Msa1404520:three_prime_UTR | 35.0% | |
| ! | TGTTGACTACAAAACTGAGA+TGG | + | tig0023067:63166-63185 | None:intergenic | 35.0% |
| TCAACATACTGCTGAAGATA+TGG | - | tig0023067:63180-63199 | Msa1404520:three_prime_UTR | 35.0% | |
| TTAGATTAGTGAAGCAACCT+GGG | + | tig0023067:63243-63262 | None:intergenic | 35.0% | |
| ATTAGATTAGTGAAGCAACC+TGG | + | tig0023067:63244-63263 | None:intergenic | 35.0% | |
| ATGTGAAACTAAACTACCCA+AGG | - | tig0023067:63708-63727 | Msa1404520:intron | 35.0% | |
| ! | GAACCTTTTGTAATGAGAAC+AGG | - | tig0023067:63744-63763 | Msa1404520:intron | 35.0% |
| AACCCTGTTCTCATTACAAA+AGG | + | tig0023067:63750-63769 | None:intergenic | 35.0% | |
| TTTGTAATGAGAACAGGGTT+AGG | - | tig0023067:63750-63769 | Msa1404520:intron | 35.0% | |
| !! | TTGGAAAGCATTGAGAAGTT+AGG | - | tig0023067:63793-63812 | Msa1404520:intron | 35.0% |
| !! | AAAGCATTGAGAAGTTAGGT+GGG | - | tig0023067:63797-63816 | Msa1404520:intron | 35.0% |
| ACTTGTGTTTCAGGAACTAT+TGG | - | tig0023067:63876-63895 | Msa1404520:intron | 35.0% | |
| TAATACAGCTAGCTCCATTT+AGG | + | tig0023067:64117-64136 | None:intergenic | 35.0% | |
| CTGTATTAGTCATGGATACA+TGG | - | tig0023067:64129-64148 | Msa1404520:intron | 35.0% | |
| !!! | ACTTCTTTTCAAGTTTCCTC+TGG | - | tig0023067:64217-64236 | Msa1404520:intron | 35.0% |
| ! | TGATCGACTTTGGATATCAA+GGG | - | tig0023067:64437-64456 | Msa1404520:intron | 35.0% |
| AGATAACAGTACCTTAGTCA+AGG | + | tig0023067:64466-64485 | None:intergenic | 35.0% | |
| CCTTTAGTGACTATAGGAAA+GGG | + | tig0023067:64693-64712 | None:intergenic | 35.0% | |
| TAAGAGCCTTTAGTGACTAT+AGG | + | tig0023067:64699-64718 | None:intergenic | 35.0% | |
| CTCTTAATCCAGGAACAAAT+AGG | - | tig0023067:64713-64732 | Msa1404520:CDS | 35.0% | |
| TTGACATGATTGAATGCCTT+AGG | + | tig0023067:64739-64758 | None:intergenic | 35.0% | |
| TCTTAATGCAGAACTACTCA+AGG | + | tig0023067:64845-64864 | None:intergenic | 35.0% | |
| ! | CCAGTTACAACATCTTTTCT+CGG | + | tig0023067:64878-64897 | None:intergenic | 35.0% |
| CTTCATGTGAAATTGAAGAC+AGG | + | tig0023067:65001-65020 | None:intergenic | 35.0% | |
| ACATGAAGAACAAGCTTCTA+TGG | - | tig0023067:65013-65032 | Msa1404520:intron | 35.0% | |
| ! | TTAACCATTTTGGACCACTA+AGG | + | tig0023067:65055-65074 | None:intergenic | 35.0% |
| AGTGGTCCAAAATGGTTAAA+CGG | - | tig0023067:65056-65075 | Msa1404520:intron | 35.0% | |
| AAGGGAAGCGAACAATAAAA+TGG | - | tig0023067:65163-65182 | Msa1404520:intron | 35.0% | |
| !!! | ATACGGACACCTTTTTCAAT+TGG | + | tig0023067:65287-65306 | None:intergenic | 35.0% |
| ATTATGTTTGTGTGGTGGTT+GGG | + | tig0023067:65348-65367 | None:intergenic | 35.0% | |
| AGATCCCATAAAATGAGATC+AGG | - | tig0023067:65582-65601 | Msa1404520:intron | 35.0% | |
| GAAAGGAAAATAATACTGCC+TGG | - | tig0023067:65965-65984 | Msa1404520:intron | 35.0% | |
| TGTAAAGGATTGAAAGAACC+AGG | + | tig0023067:65986-66005 | None:intergenic | 35.0% | |
| TTGATATGCCCATCATGTAA+AGG | + | tig0023067:66001-66020 | None:intergenic | 35.0% | |
| AAGAACATGGGTTTCTATAC+CGG | + | tig0023067:66042-66061 | None:intergenic | 35.0% | |
| AACTATACTGGTAACTCCAA+GGG | + | tig0023067:66351-66370 | None:intergenic | 35.0% | |
| ACTTCATATGTTCCAAGACA+CGG | + | tig0023067:66442-66461 | None:intergenic | 35.0% | |
| TTAACTACATGAGGAATGCT+AGG | - | tig0023067:66467-66486 | Msa1404520:intron | 35.0% | |
| !! | CAAAGGGTGCTCTTATAAAA+AGG | - | tig0023067:66639-66658 | Msa1404520:intron | 35.0% |
| !!! | TCCTTGTTTTGAACTATCTG+CGG | - | tig0023067:67446-67465 | Msa1404520:intron | 35.0% |
| !!! | GAGATTTTTTATGCTCTCCT+TGG | - | tig0023067:67540-67559 | Msa1404520:intron | 35.0% |
| TAGTGAAGAGTAGGATTAAG+AGG | - | tig0023067:67765-67784 | Msa1404520:intron | 35.0% | |
| !! | ACATTCAGCCACTTGTTTTT+GGG | - | tig0023067:67869-67888 | Msa1404520:intron | 35.0% |
| GTATGAAACTACTTACTGCT+TGG | - | tig0023067:68228-68247 | Msa1404520:intron | 35.0% | |
| AAAGCGCATCATTTAGTCAT+TGG | - | tig0023067:68427-68446 | Msa1404520:intron | 35.0% | |
| AACTGTGTGTCAATTTGTAG+TGG | - | tig0023067:68495-68514 | Msa1404520:intron | 35.0% | |
| ! | AACAAAAGTCGGTCCATTTT+AGG | + | tig0023067:68543-68562 | None:intergenic | 35.0% |
| TTCTGGGTGAATAAGTAAGA+TGG | - | tig0023067:68647-68666 | Msa1404520:intron | 35.0% | |
| !! | ACAATGAGATGATGGAAAGT+GGG | - | tig0023067:68781-68800 | Msa1404520:intron | 35.0% |
| GAGTTAGCAAAACTTAGGAA+CGG | - | tig0023067:68875-68894 | Msa1404520:intron | 35.0% | |
| CGTGTGAAAATCTTACATGA+AGG | + | tig0023067:68904-68923 | None:intergenic | 35.0% | |
| !!! | GACATAATGCTGTTTTCAAG+AGG | + | tig0023067:69183-69202 | None:intergenic | 35.0% |
| !! | TATTTCTCATTTTTGCCTCG+TGG | - | tig0023067:69272-69291 | Msa1404520:intron | 35.0% |
| !! | ATTTCTCATTTTTGCCTCGT+GGG | - | tig0023067:69273-69292 | Msa1404520:intron | 35.0% |
| ACATATACCATTCAGACTTG+TGG | + | tig0023067:69310-69329 | None:intergenic | 35.0% | |
| AGTCTGAATGGTATATGTAG+TGG | - | tig0023067:69312-69331 | Msa1404520:intron | 35.0% | |
| TTGCAGCCTAAATACTATGA+TGG | - | tig0023067:69397-69416 | Msa1404520:intron | 35.0% | |
| TGCAGCCTAAATACTATGAT+GGG | - | tig0023067:69398-69417 | Msa1404520:intron | 35.0% | |
| TAGTCCCCATCATAGTATTT+AGG | + | tig0023067:69406-69425 | None:intergenic | 35.0% | |
| AACAAGATGCTGAAGATACT+TGG | - | tig0023067:69427-69446 | Msa1404520:intron | 35.0% | |
| GAATGTAGATGGTGCATTTA+AGG | - | tig0023067:69492-69511 | Msa1404520:intron | 35.0% | |
| ATGTTATTGAGGACATTGTG+TGG | - | tig0023067:69567-69586 | Msa1404520:intron | 35.0% | |
| ! | TTTTTATGGCTGAAGGTCAA+AGG | - | tig0023067:69718-69737 | Msa1404520:intron | 35.0% |
| !! | AGGTCACCACTTTTATATTG+CGG | + | tig0023067:69773-69792 | None:intergenic | 35.0% |
| !!! | CATTTTAAAACAATCGCAGG+AGG | - | tig0023067:69803-69822 | Msa1404520:intron | 35.0% |
| GTTCGATGAACATAAAACCT+TGG | + | tig0023067:69843-69862 | None:intergenic | 35.0% | |
| ! | AGAGGAGTGTATTGCTTCTA+CGG | + | tig0023067:62907-62926 | None:intergenic | 40.0% |
| !! | AGATAGAGAACGGTTTGGTA+TGG | + | tig0023067:62930-62949 | None:intergenic | 40.0% |
| ! | AAGAACAGTATTGGAAGCAC+CGG | + | tig0023067:62997-63016 | None:intergenic | 40.0% |
| AACGGCTTCAAGAACAGTAT+TGG | + | tig0023067:63006-63025 | None:intergenic | 40.0% | |
| TAGATTAGTGAAGCAACCTG+GGG | + | tig0023067:63242-63261 | None:intergenic | 40.0% | |
| TTCACCTGTTGTGATTCCTT+GGG | + | tig0023067:63727-63746 | None:intergenic | 40.0% | |
| !! | GAAAGCATTGAGAAGTTAGG+TGG | - | tig0023067:63796-63815 | Msa1404520:intron | 40.0% |
| AATAACCTGCTAGTACCACT+TGG | - | tig0023067:63837-63856 | Msa1404520:intron | 40.0% | |
| ATAATCCAAGTGGTACTAGC+AGG | + | tig0023067:63845-63864 | None:intergenic | 40.0% | |
| AATCATATATGGGGGAGCAA+GGG | + | tig0023067:64345-64364 | None:intergenic | 40.0% | |
| AAATCATATATGGGGGAGCA+AGG | + | tig0023067:64346-64365 | None:intergenic | 40.0% | |
| ! | GCTCCCCCATATATGATTTT+TGG | - | tig0023067:64347-64366 | Msa1404520:intron | 40.0% |
| ! | CTGATCGACTTTGGATATCA+AGG | - | tig0023067:64436-64455 | Msa1404520:intron | 40.0% |
| CCCTTTCCTATAGTCACTAA+AGG | - | tig0023067:64690-64709 | Msa1404520:intron | 40.0% | |
| GCCTTTAGTGACTATAGGAA+AGG | + | tig0023067:64694-64713 | None:intergenic | 40.0% | |
| TCACTAAAGGCTCTTAATCC+AGG | - | tig0023067:64703-64722 | Msa1404520:CDS | 40.0% | |
| CATCGGTACAAGATAAAGCT+AGG | - | tig0023067:64787-64806 | Msa1404520:intron | 40.0% | |
| CCGAGAAAAGATGTTGTAAC+TGG | - | tig0023067:64875-64894 | Msa1404520:intron | 40.0% | |
| GAAGACAGGAACACAACAAA+GGG | + | tig0023067:64987-65006 | None:intergenic | 40.0% | |
| TGAAGACAGGAACACAACAA+AGG | + | tig0023067:64988-65007 | None:intergenic | 40.0% | |
| CGCTTCAATTACAACCTTAG+TGG | - | tig0023067:65038-65057 | Msa1404520:intron | 40.0% | |
| ACAACCTTAGTGGTCCAAAA+TGG | - | tig0023067:65048-65067 | Msa1404520:intron | 40.0% | |
| !!! | TGGTTTTATGGTGGCTATGA+AGG | - | tig0023067:65095-65114 | Msa1404520:intron | 40.0% |
| TTATGTTTGTGTGGTGGTTG+GGG | + | tig0023067:65347-65366 | None:intergenic | 40.0% | |
| CATTATGTTTGTGTGGTGGT+TGG | + | tig0023067:65349-65368 | None:intergenic | 40.0% | |
| TACTCGAGAAGAAGAAGACA+GGG | - | tig0023067:65422-65441 | Msa1404520:CDS | 40.0% | |
| ! | TTCTAGCCATCTTTTGCTCA+AGG | - | tig0023067:65446-65465 | Msa1404520:CDS | 40.0% |
| TACACACCTTGAGCAAAAGA+TGG | + | tig0023067:65455-65474 | None:intergenic | 40.0% | |
| ! | TTTTGCTCAAGGTGTGTAAC+AGG | - | tig0023067:65457-65476 | Msa1404520:CDS | 40.0% |
| GGTTCCTTCCAATGATATTC+CGG | - | tig0023067:65726-65745 | Msa1404520:intron | 40.0% | |
| AACTCCGGAATATCATTGGA+AGG | + | tig0023067:65733-65752 | None:intergenic | 40.0% | |
| ACTCAACTCCGGAATATCAT+TGG | + | tig0023067:65737-65756 | None:intergenic | 40.0% | |
| ACATCTGATTCACTCAACTC+CGG | + | tig0023067:65748-65767 | None:intergenic | 40.0% | |
| TTTCAGAGATACCAGCAGAA+AGG | - | tig0023067:65948-65967 | Msa1404520:intron | 40.0% | |
| AGAACATGGGTTTCTATACC+GGG | + | tig0023067:66041-66060 | None:intergenic | 40.0% | |
| AATCCCACAGCTATACTTGT+GGG | + | tig0023067:66262-66281 | None:intergenic | 40.0% | |
| TAATCCCACAGCTATACTTG+TGG | + | tig0023067:66263-66282 | None:intergenic | 40.0% | |
| TTAACCGATGGGATCATGAA+TGG | - | tig0023067:66280-66299 | Msa1404520:intron | 40.0% | |
| AATCCTACAGTCAACGCTTA+AGG | + | tig0023067:66324-66343 | None:intergenic | 40.0% | |
| GAACTATACTGGTAACTCCA+AGG | + | tig0023067:66352-66371 | None:intergenic | 40.0% | |
| AGTTACCAGTATAGTTCACC+TGG | - | tig0023067:66355-66374 | Msa1404520:intron | 40.0% | |
| GTTACCAGTATAGTTCACCT+GGG | - | tig0023067:66356-66375 | Msa1404520:intron | 40.0% | |
| TCGGGAGAACAAACAGATAA+AGG | - | tig0023067:67023-67042 | Msa1404520:intron | 40.0% | |
| ACCGCAGATAGTTCAAAACA+AGG | + | tig0023067:67450-67469 | None:intergenic | 40.0% | |
| TGCAGACAAACCTCCATTAT+CGG | - | tig0023067:67473-67492 | Msa1404520:CDS | 40.0% | |
| ! | TTGATCTGAGACACCGATAA+TGG | + | tig0023067:67489-67508 | None:intergenic | 40.0% |
| ATTCGTTAGGGCAGTTAGTT+AGG | - | tig0023067:67804-67823 | Msa1404520:intron | 40.0% | |
| TTCGTTAGGGCAGTTAGTTA+GGG | - | tig0023067:67805-67824 | Msa1404520:intron | 40.0% | |
| !! | GACATTCAGCCACTTGTTTT+TGG | - | tig0023067:67868-67887 | Msa1404520:intron | 40.0% |
| AGTTCTCTCCCAAAAACAAG+TGG | + | tig0023067:67880-67899 | None:intergenic | 40.0% | |
| GACTTCTCTACGATAAATGC+AGG | - | tig0023067:68099-68118 | Msa1404520:intron | 40.0% | |
| AAGAAGGCTGAACTATTTCC+TGG | - | tig0023067:68159-68178 | Msa1404520:intron | 40.0% | |
| AACATGGTCCAACAGAATCT+GGG | + | tig0023067:68349-68368 | None:intergenic | 40.0% | |
| TAACATGGTCCAACAGAATC+TGG | + | tig0023067:68350-68369 | None:intergenic | 40.0% | |
| GTGTGTCAATTTGTAGTGGT+TGG | - | tig0023067:68499-68518 | Msa1404520:intron | 40.0% | |
| !! | CACAATGAGATGATGGAAAG+TGG | - | tig0023067:68780-68799 | Msa1404520:intron | 40.0% |
| AGATCATAGAATGTCATCGG+TGG | - | tig0023067:68821-68840 | Msa1404520:intron | 40.0% | |
| TCTATGACCTATGCTGAGAA+AGG | + | tig0023067:69085-69104 | None:intergenic | 40.0% | |
| CTCAGCATAGGTCATAGATA+TGG | - | tig0023067:69087-69106 | Msa1404520:intron | 40.0% | |
| TGGTGATTGAGTTAATTGGG+AGG | - | tig0023067:69107-69126 | Msa1404520:intron | 40.0% | |
| TTCAGAGGCTAAACACGTTA+AGG | - | tig0023067:69210-69229 | Msa1404520:intron | 40.0% | |
| TACCATTCAGACTTGTGGTT+TGG | + | tig0023067:69305-69324 | None:intergenic | 40.0% | |
| AAGCACAGAATGCGAATTTC+AGG | + | tig0023067:69349-69368 | None:intergenic | 40.0% | |
| GCAGCCTAAATACTATGATG+GGG | - | tig0023067:69399-69418 | Msa1404520:intron | 40.0% | |
| AAGATGCTGAAGATACTTGG+TGG | - | tig0023067:69430-69449 | Msa1404520:intron | 40.0% | |
| ! | CTTGGTGGTTGTAAAGAAAC+AGG | - | tig0023067:69445-69464 | Msa1404520:intron | 40.0% |
| CAGTAGAGGATATATCCATG+CGG | + | tig0023067:69669-69688 | None:intergenic | 40.0% | |
| ! | AGGTACAGTTTTCTGATCCA+AGG | - | tig0023067:69823-69842 | Msa1404520:intron | 40.0% |
| CTCTTGTTGGGATTTGTAAC+TGG | - | tig0023067:70020-70039 | Msa1404520:CDS | 40.0% | |
| ! | GGTGTGTGGTCTATTTTCAA+AGG | - | tig0023067:70041-70060 | Msa1404520:exon | 40.0% |
| ATGCAAGCTTCCGTCATTCT+CGG | + | tig0023067:62876-62895 | None:intergenic | 45.0% | |
| CAGCAAGATAGAGAACGGTT+TGG | + | tig0023067:62935-62954 | None:intergenic | 45.0% | |
| CAAACCGTTCTCTATCTTGC+TGG | - | tig0023067:62933-62952 | Msa1404520:three_prime_UTR | 45.0% | |
| !! | GGTTTGTTGCTATCTGTTCC+CGG | - | tig0023067:62975-62994 | Msa1404520:three_prime_UTR | 45.0% |
| !! | AGAACAGTATTGGAAGCACC+GGG | + | tig0023067:62996-63015 | None:intergenic | 45.0% |
| TCTGATTCAGTTACTGGGCA+AGG | - | tig0023067:63046-63065 | Msa1404520:three_prime_UTR | 45.0% | |
| CGATGAGCGCATGTGTTATA+AGG | - | tig0023067:63341-63360 | Msa1404520:intron | 45.0% | |
| TGATTAGGATCCCCAGTTGT+TGG | - | tig0023067:63397-63416 | Msa1404520:intron | 45.0% | |
| !! | TTCACCGGTTCTTTGGTTAG+CGG | - | tig0023067:63427-63446 | Msa1404520:CDS | 45.0% |
| ! | TACCTATGTTCCCCGTGTTT+TGG | + | tig0023067:63457-63476 | None:intergenic | 45.0% |
| GATATGCCTAGCTACCGAAA+AGG | - | tig0023067:63554-63573 | Msa1404520:intron | 45.0% | |
| ! | AGGAAACCTTTTCGGTAGCT+AGG | + | tig0023067:63563-63582 | None:intergenic | 45.0% |
| TACCGAAAAGGTTTCCTCGT+GGG | - | tig0023067:63566-63585 | Msa1404520:intron | 45.0% | |
| ACTACCCAAGGAATCACAAC+AGG | - | tig0023067:63720-63739 | Msa1404520:intron | 45.0% | |
| GTTCACCTGTTGTGATTCCT+TGG | + | tig0023067:63728-63747 | None:intergenic | 45.0% | |
| GGAGCTAGCTGTATTAGTCA+TGG | - | tig0023067:64121-64140 | Msa1404520:intron | 45.0% | |
| ATCAAGGGTGACCTTGACTA+AGG | - | tig0023067:64452-64471 | Msa1404520:intron | 45.0% | |
| TCCAGGAACAAATAGGCCTA+AGG | - | tig0023067:64720-64739 | Msa1404520:CDS | 45.0% | |
| GGTCCAAAATGGTTAAACGG+AGG | - | tig0023067:65059-65078 | Msa1404520:intron | 45.0% | |
| ! | CCACCTCCGTTTAACCATTT+TGG | + | tig0023067:65065-65084 | None:intergenic | 45.0% |
| CCAAAATGGTTAAACGGAGG+TGG | - | tig0023067:65062-65081 | Msa1404520:intron | 45.0% | |
| AAATGGTTAAACGGAGGTGG+TGG | - | tig0023067:65065-65084 | Msa1404520:intron | 45.0% | |
| ATGGTGGCTATGAAGGAACA+AGG | - | tig0023067:65102-65121 | Msa1404520:intron | 45.0% | |
| GAACATTTCCGAGAAAGCAG+CGG | - | tig0023067:65135-65154 | Msa1404520:intron | 45.0% | |
| ! | CTTTCTTACCGCTGCTTTCT+CGG | + | tig0023067:65146-65165 | None:intergenic | 45.0% |
| GAGAAAGCAGCGGTAAGAAA+GGG | - | tig0023067:65145-65164 | Msa1404520:intron | 45.0% | |
| TATGTTTGTGTGGTGGTTGG+GGG | + | tig0023067:65346-65365 | None:intergenic | 45.0% | |
| GTACTCGAGAAGAAGAAGAC+AGG | - | tig0023067:65421-65440 | Msa1404520:CDS | 45.0% | |
| GGCTATTGCAAATGCATGCA+AGG | - | tig0023067:65705-65724 | Msa1404520:intron | 45.0% | |
| ! | TGATGGGCATATCAAGCTCA+TGG | - | tig0023067:66006-66025 | Msa1404520:intron | 45.0% |
| AATCCCCACAAGTATAGCTG+TGG | - | tig0023067:66255-66274 | Msa1404520:intron | 45.0% | |
| ATCCCCACAAGTATAGCTGT+GGG | - | tig0023067:66256-66275 | Msa1404520:intron | 45.0% | |
| ATCCCACAGCTATACTTGTG+GGG | + | tig0023067:66261-66280 | None:intergenic | 45.0% | |
| ATAGCTGTGGGATTAACCGA+TGG | - | tig0023067:66268-66287 | Msa1404520:intron | 45.0% | |
| TAGCTGTGGGATTAACCGAT+GGG | - | tig0023067:66269-66288 | Msa1404520:intron | 45.0% | |
| ACCACCATTCATGATCCCAT+CGG | + | tig0023067:66287-66306 | None:intergenic | 45.0% | |
| CTACAGTCAACGCTTAAGGA+AGG | + | tig0023067:66320-66339 | None:intergenic | 45.0% | |
| !! | CTTCCTTAAGCGTTGACTGT+AGG | - | tig0023067:66318-66337 | Msa1404520:intron | 45.0% |
| GACTGTAGGATTTGAACCCT+TGG | - | tig0023067:66332-66351 | Msa1404520:intron | 45.0% | |
| TGAACCCAGGTGAACTATAC+TGG | + | tig0023067:66363-66382 | None:intergenic | 45.0% | |
| TAAGAGTAGACTGTGAACCC+AGG | + | tig0023067:66376-66395 | None:intergenic | 45.0% | |
| GCACATCTATGCAGCATTTG+CGG | - | tig0023067:67414-67433 | Msa1404520:intron | 45.0% | |
| TATGCAGCATTTGCGGTGAT+GGG | - | tig0023067:67421-67440 | Msa1404520:intron | 45.0% | |
| ! | ATCTGAGACACCGATAATGG+AGG | + | tig0023067:67486-67505 | None:intergenic | 45.0% |
| TCGTTAGGGCAGTTAGTTAG+GGG | - | tig0023067:67806-67825 | Msa1404520:intron | 45.0% | |
| !! | CCAATTACAAAAGCACTGCC+AGG | + | tig0023067:68180-68199 | None:intergenic | 45.0% |
| ! | CCTGGCAGTGCTTTTGTAAT+TGG | - | tig0023067:68177-68196 | Msa1404520:intron | 45.0% |
| CACTCAATCCCAGATTCTGT+TGG | - | tig0023067:68338-68357 | Msa1404520:intron | 45.0% | |
| TCATAGAATGTCATCGGTGG+TGG | - | tig0023067:68824-68843 | Msa1404520:intron | 45.0% | |
| AGAGGATCCTTTCTCAGCAT+AGG | - | tig0023067:69075-69094 | Msa1404520:intron | 45.0% | |
| ! | ATTCAGACTTGTGGTTTGGC+TGG | + | tig0023067:69301-69320 | None:intergenic | 45.0% |
| AGCCAAACCACAAGTCTGAA+TGG | - | tig0023067:69300-69319 | Msa1404520:intron | 45.0% | |
| TGCGGATTTGTGCTTCATGA+AGG | + | tig0023067:69755-69774 | None:intergenic | 45.0% | |
| TGGGATTTGTAACTGGTGTG+TGG | - | tig0023067:70027-70046 | Msa1404520:exon | 45.0% | |
| !!! | TTAAATTTATTTTCATTTAT+TGG | - | tig0023067:67361-67380 | Msa1404520:intron | 5.0% |
| TGCAAGCTTCCGTCATTCTC+GGG | + | tig0023067:62875-62894 | None:intergenic | 50.0% | |
| GTATTGCTTCTACGGCGGTT+CGG | + | tig0023067:62899-62918 | None:intergenic | 50.0% | |
| GGAGTGTATTGCTTCTACGG+CGG | + | tig0023067:62904-62923 | None:intergenic | 50.0% | |
| !! | GAGAACGGTTTGGTATGGAG+AGG | + | tig0023067:62925-62944 | None:intergenic | 50.0% |
| ACCGTTCTCTATCTTGCTGG+CGG | - | tig0023067:62936-62955 | Msa1404520:three_prime_UTR | 50.0% | |
| TCCGCCAGCAAGATAGAGAA+CGG | + | tig0023067:62940-62959 | None:intergenic | 50.0% | |
| ATTAGTGAAGCAACCTGGGG+AGG | + | tig0023067:63239-63258 | None:intergenic | 50.0% | |
| TGAAGCCCACACCAACAACT+GGG | + | tig0023067:63411-63430 | None:intergenic | 50.0% | |
| ACGACCGCTAACCAAAGAAC+CGG | + | tig0023067:63434-63453 | None:intergenic | 50.0% | |
| GTTAGCGGTCGTCCAAAACA+CGG | - | tig0023067:63442-63461 | Msa1404520:CDS | 50.0% | |
| TTAGCGGTCGTCCAAAACAC+GGG | - | tig0023067:63443-63462 | Msa1404520:CDS | 50.0% | |
| GTCCAAAACACGGGGAACAT+AGG | - | tig0023067:63452-63471 | Msa1404520:CDS | 50.0% | |
| CTACCGAAAAGGTTTCCTCG+TGG | - | tig0023067:63565-63584 | Msa1404520:intron | 50.0% | |
| ACCGAAAAGGTTTCCTCGTG+GGG | - | tig0023067:63567-63586 | Msa1404520:intron | 50.0% | |
| ATAAACTGGAATCCCCCACG+AGG | + | tig0023067:63583-63602 | None:intergenic | 50.0% | |
| ! | CAAGGACAGCTGATCGACTT+TGG | - | tig0023067:64427-64446 | Msa1404520:intron | 50.0% |
| GCCTTAGGCCTATTTGTTCC+TGG | + | tig0023067:64724-64743 | None:intergenic | 50.0% | |
| AGCCACCATAAAACCACCAC+CGG | + | tig0023067:65091-65110 | None:intergenic | 50.0% | |
| GAAGGAACAAGGTAATGCCG+CGG | - | tig0023067:65113-65132 | Msa1404520:intron | 50.0% | |
| GCTTTCTCGGAAATGTTCCG+CGG | + | tig0023067:65133-65152 | None:intergenic | 50.0% | |
| CGAGAAAGCAGCGGTAAGAA+AGG | - | tig0023067:65144-65163 | Msa1404520:intron | 50.0% | |
| AGCTCATGGAAGTTGCAACC+CGG | - | tig0023067:66020-66039 | Msa1404520:intron | 50.0% | |
| ACCGATGGGATCATGAATGG+TGG | - | tig0023067:66283-66302 | Msa1404520:intron | 50.0% | |
| CTATGCAGCATTTGCGGTGA+TGG | - | tig0023067:67420-67439 | Msa1404520:intron | 50.0% | |
| TGATGACAAGCAGAAGCCCT+TGG | - | tig0023067:67912-67931 | Msa1404520:intron | 50.0% | |
| GATGACAAGCAGAAGCCCTT+GGG | - | tig0023067:67913-67932 | Msa1404520:intron | 50.0% | |
| ATGACAAGCAGAAGCCCTTG+GGG | - | tig0023067:67914-67933 | Msa1404520:intron | 50.0% | |
| CCAAGAGATACTCTCCCCAA+GGG | + | tig0023067:67931-67950 | None:intergenic | 50.0% | |
| ACCAAGAGATACTCTCCCCA+AGG | + | tig0023067:67932-67951 | None:intergenic | 50.0% | |
| AACAGGATGCACCTTCCTTG+TGG | - | tig0023067:69462-69481 | Msa1404520:intron | 50.0% | |
| !! | AGGACATTGTGTGGTGCTAC+AGG | - | tig0023067:69576-69595 | Msa1404520:intron | 50.0% |
| CAAAGAGGAGTCGTGTGTGT+TGG | - | tig0023067:69880-69899 | Msa1404520:CDS | 50.0% | |
| TTGGTCTGGTTGCCAACTTG+TGG | - | tig0023067:70074-70093 | Msa1404520:five_prime_UTR | 50.0% | |
| AGGATCCCCAGTTGTTGGTG+TGG | - | tig0023067:63402-63421 | Msa1404520:intron | 55.0% | |
| GGATCCCCAGTTGTTGGTGT+GGG | - | tig0023067:63403-63422 | Msa1404520:intron | 55.0% | |
| GAAGCCCACACCAACAACTG+GGG | + | tig0023067:63410-63429 | None:intergenic | 55.0% | |
| GTGAAGCCCACACCAACAAC+TGG | + | tig0023067:63412-63431 | None:intergenic | 55.0% | |
| GTTGTTGGTGTGGGCTTCAC+CGG | - | tig0023067:63412-63431 | Msa1404520:CDS | 55.0% | |
| !! | TGTGGGCTTCACCGGTTCTT+TGG | - | tig0023067:63420-63439 | Msa1404520:CDS | 55.0% |
| TAGCGGTCGTCCAAAACACG+GGG | - | tig0023067:63444-63463 | Msa1404520:CDS | 55.0% | |
| ! | CCCCCACGAGGAAACCTTTT+CGG | + | tig0023067:63571-63590 | None:intergenic | 55.0% |
| CCGAAAAGGTTTCCTCGTGG+GGG | - | tig0023067:63568-63587 | Msa1404520:intron | 55.0% | |
| !! | CCCTTGGGGAGAGTATCTCT+TGG | - | tig0023067:67928-67947 | Msa1404520:intron | 55.0% |
| !! | TTGGTGCTGACACAGCAGTG+AGG | - | tig0023067:68196-68215 | Msa1404520:intron | 55.0% |
| ATTCCGACCAGCCACAAGGA+AGG | + | tig0023067:69476-69495 | None:intergenic | 55.0% | |
| CTACATTCCGACCAGCCACA+AGG | + | tig0023067:69480-69499 | None:intergenic | 55.0% | |
| ! | GTGGCTGGTCGGAATGTAGA+TGG | - | tig0023067:69481-69500 | Msa1404520:intron | 55.0% |
| GCGGAACTGTTCAGCTGGAA+TGG | + | tig0023067:69650-69669 | None:intergenic | 55.0% | |
| TCCAGCTGAACAGTTCCGCA+TGG | - | tig0023067:69651-69670 | Msa1404520:intron | 55.0% | |
| TCCATGCGGAACTGTTCAGC+TGG | + | tig0023067:69655-69674 | None:intergenic | 55.0% | |
| TCTTGCTGGCGGAGCTTCTC+AGG | - | tig0023067:62947-62966 | Msa1404520:three_prime_UTR | 60.0% | |
| TGGCGGAGCTTCTCAGGTTC+TGG | - | tig0023067:62953-62972 | Msa1404520:three_prime_UTR | 60.0% | |
| GGCGGAGCTTCTCAGGTTCT+GGG | - | tig0023067:62954-62973 | Msa1404520:three_prime_UTR | 60.0% | |
| GCTCTTAAGCTCTCCTCCCC+AGG | - | tig0023067:63223-63242 | Msa1404520:CDS | 60.0% | |
| !! | TGGGGGAGCAAGGGTATCAC+AGG | + | tig0023067:64336-64355 | None:intergenic | 60.0% |
| ! | GGTTAAACGGAGGTGGTGGC+CGG | - | tig0023067:65069-65088 | Msa1404520:intron | 60.0% |
| !! | GGTGGCCGGTGGTGGTTTTA+TGG | - | tig0023067:65083-65102 | Msa1404520:intron | 60.0% |
| !!! | GGCCGGTGGTGGTTTTATGG+TGG | - | tig0023067:65086-65105 | Msa1404520:intron | 60.0% |
| TTGTGTGGTGGTTGGGGGAG+AGG | + | tig0023067:65341-65360 | None:intergenic | 60.0% | |
| GGATGCACCTTCCTTGTGGC+TGG | - | tig0023067:69466-69485 | Msa1404520:intron | 60.0% | |
| GCACCTTCCTTGTGGCTGGT+CGG | - | tig0023067:69470-69489 | Msa1404520:intron | 60.0% | |
| ! | TAAACGGAGGTGGTGGCCGG+TGG | - | tig0023067:65072-65091 | Msa1404520:intron | 65.0% |
| ! | TGGTTTGGCTGGCACCCACG+AGG | + | tig0023067:69290-69309 | None:intergenic | 65.0% |
| GTGGTGGTTGGGGGAGAGGC+TGG | + | tig0023067:65337-65356 | None:intergenic | 70.0% | |
| ! | ACGGAGGTGGTGGCCGGTGG+TGG | - | tig0023067:65075-65094 | Msa1404520:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023067 | gene | 62799 | 70121 | 62799 | ID=Msa1404520;Name=Msa1404520 |
| tig0023067 | mRNA | 62799 | 70121 | 62799 | ID=Msa1404520-mRNA-1;Parent=Msa1404520;Name=Msa1404520-mRNA-1;_AED=0.15;_eAED=0.15;_QI=80|0.88|0.9|1|0.77|0.9|10|407|334 |
| tig0023067 | exon | 62799 | 63322 | 62799 | ID=Msa1404520-mRNA-1:exon:23664;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 63407 | 63517 | 63407 | ID=Msa1404520-mRNA-1:exon:23663;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 64693 | 64799 | 64693 | ID=Msa1404520-mRNA-1:exon:23662;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 65383 | 65492 | 65383 | ID=Msa1404520-mRNA-1:exon:23661;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 66879 | 66966 | 66879 | ID=Msa1404520-mRNA-1:exon:23660;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 67058 | 67214 | 67058 | ID=Msa1404520-mRNA-1:exon:23659;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 67453 | 67506 | 67453 | ID=Msa1404520-mRNA-1:exon:23658;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 68447 | 68507 | 68447 | ID=Msa1404520-mRNA-1:exon:23657;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 69750 | 69760 | 69750 | ID=Msa1404520-mRNA-1:exon:23656;Parent=Msa1404520-mRNA-1 |
| tig0023067 | exon | 69853 | 70121 | 69853 | ID=Msa1404520-mRNA-1:exon:23655;Parent=Msa1404520-mRNA-1 |
| tig0023067 | five_prime_UTR | 70042 | 70121 | 70042 | ID=Msa1404520-mRNA-1:five_prime_utr;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 69853 | 70041 | 69853 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 69750 | 69760 | 69750 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 68447 | 68507 | 68447 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 67453 | 67506 | 67453 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 67058 | 67214 | 67058 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 66879 | 66966 | 66879 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 65383 | 65492 | 65383 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 64693 | 64799 | 64693 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 63407 | 63517 | 63407 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | CDS | 63206 | 63322 | 63206 | ID=Msa1404520-mRNA-1:cds;Parent=Msa1404520-mRNA-1 |
| tig0023067 | three_prime_UTR | 62799 | 63205 | 62799 | ID=Msa1404520-mRNA-1:three_prime_utr;Parent=Msa1404520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
