Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183260 | KEH44388.1 | 87.961 | 407 | 16 | 2 | 1 | 404 | 1 | 377 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183260 | sp|Q91WT4|DJC17_MOUSE | 31.757 | 296 | 166 | 9 | 4 | 282 | 9 | 285 | 3.75e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183260 | A0A072VSL7 | 87.961 | 407 | 16 | 2 | 1 | 404 | 1 | 377 | 0.0 | 665 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0183260 | Msa0215990 | 0.806046 | 9.947574e-50 | -8.615850e-47 |
| Msa0183260 | Msa0881150 | 0.803299 | 3.724458e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183260 | MtrunA17_Chr1g0211331 | 92.759 | 290 | 18 | 1 | 1 | 287 | 1 | 290 | 0.0 | 520 |
| Msa0183260 | MtrunA17_Chr1g0211331 | 92.982 | 57 | 4 | 0 | 348 | 404 | 282 | 338 | 5.42e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183260 | AT5G23590.1 | 59.155 | 284 | 110 | 1 | 1 | 278 | 1 | 284 | 2.35e-113 | 333 |
| Msa0183260 | AT5G23590.2 | 59.155 | 284 | 110 | 1 | 1 | 278 | 1 | 284 | 2.35e-113 | 333 |
| Msa0183260 | AT1G59980.1 | 45.455 | 66 | 31 | 1 | 8 | 73 | 25 | 85 | 4.29e-11 | 64.7 |
| Msa0183260 | AT1G59980.2 | 45.455 | 66 | 31 | 1 | 8 | 73 | 25 | 85 | 4.34e-11 | 64.3 |
Find 143 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGTATACAACACTAAAA+TGG | 0.185915 | 1_4:-72119417 | Msa0183260:three_prime_UTR |
| TGGAAATTGGCGGCGGCGTT+GGG | 0.191651 | 1_4:+72123594 | None:intergenic |
| GGGTCCATGACAAATGTTTC+TGG | 0.205815 | 1_4:-72119574 | Msa0183260:three_prime_UTR |
| GTTGAAGACGTTGTTATTAA+AGG | 0.212070 | 1_4:-72123150 | Msa0183260:CDS |
| TATTAAAGGCAGTAAGAAAA+AGG | 0.231496 | 1_4:-72123136 | Msa0183260:CDS |
| GAATTCTGAGATTAACCTTT+TGG | 0.237672 | 1_4:-72119362 | Msa0183260:three_prime_UTR |
| TTGGAAATTGGCGGCGGCGT+TGG | 0.267745 | 1_4:+72123593 | None:intergenic |
| CAAGAATCTGCTGGCATTGT+AGG | 0.272513 | 1_4:+72122732 | None:intergenic |
| AAACACCAGAATGGACTATT+TGG | 0.275963 | 1_4:-72120182 | Msa0183260:CDS |
| AAAGGTTAATCTCAGAATTC+TGG | 0.278756 | 1_4:+72119365 | None:intergenic |
| CTTGCTTGCTATGGACCATT+AGG | 0.291350 | 1_4:+72119307 | None:intergenic |
| AGTACGAAGTTGTTGGAAAT+TGG | 0.293897 | 1_4:+72123581 | None:intergenic |
| CGATGGAAAACGCCGTAAAA+TGG | 0.294200 | 1_4:-72123466 | Msa0183260:CDS |
| CTGGTGGTGGTGAACGGTTT+GGG | 0.298523 | 1_4:-72121565 | Msa0183260:CDS |
| CTCCCTCTCGCCGCAGAATC+AGG | 0.301990 | 1_4:+72123405 | None:intergenic |
| GAAGAAAGCAGGAGCTGATT+TGG | 0.308525 | 1_4:-72123316 | Msa0183260:CDS |
| AGGTTGGGACTAAGCTTTGC+TGG | 0.321381 | 1_4:+72119327 | None:intergenic |
| ATTCGCCGATTCTCATTCTT+AGG | 0.328030 | 1_4:-72120152 | Msa0183260:intron |
| CTGTTGGAGAAGGGAGGTTC+TGG | 0.333297 | 1_4:-72121584 | Msa0183260:intron |
| TCAATGATTGTTCCACTAAC+TGG | 0.339426 | 1_4:-72119171 | Msa0183260:three_prime_UTR |
| TTCGAGCTTTGTCATCTTTG+AGG | 0.350993 | 1_4:+72123547 | None:intergenic |
| TCTGGTGGTGGTGAACGGTT+TGG | 0.352114 | 1_4:-72121566 | Msa0183260:CDS |
| AGGATGGAGTTCAAGGGCTT+TGG | 0.352114 | 1_4:+72123635 | None:intergenic |
| AATAAACAAGTCATGTGTTC+TGG | 0.353182 | 1_4:-72119463 | Msa0183260:three_prime_UTR |
| GGGTCGTCGGGGCGTTTGTC+AGG | 0.354379 | 1_4:+72123615 | None:intergenic |
| ACTAGTTTACTCGGAGCTTC+AGG | 0.355993 | 1_4:+72122687 | None:intergenic |
| TACAATGCCAGCAGATTCTT+GGG | 0.357913 | 1_4:-72122730 | Msa0183260:CDS |
| GCGGCGGCGTTGGGGTCGTC+GGG | 0.358836 | 1_4:+72123603 | None:intergenic |
| CTACAATGCCAGCAGATTCT+TGG | 0.359734 | 1_4:-72122731 | Msa0183260:CDS |
| CCCAGCCTGCTTGCTTGCTA+TGG | 0.361825 | 1_4:+72119298 | None:intergenic |
| GGCGGCGGCGTTGGGGTCGT+CGG | 0.363653 | 1_4:+72123602 | None:intergenic |
| CAAGCAAGCAGGCTGGGAAT+TGG | 0.368680 | 1_4:-72119292 | Msa0183260:three_prime_UTR |
| TGTGTTTGCAAGTACAATAA+AGG | 0.375262 | 1_4:-72119244 | Msa0183260:three_prime_UTR |
| ATTGTACTTGCAAACACAAC+GGG | 0.391826 | 1_4:+72119249 | None:intergenic |
| TCATGTGTTCTGGGTCAGTT+TGG | 0.394137 | 1_4:-72119453 | Msa0183260:three_prime_UTR |
| GAGAAGGGAGGTTCTGGTGG+TGG | 0.401447 | 1_4:-72121578 | Msa0183260:intron |
| AGCCCCATCTCTCTCACGTT+TGG | 0.413347 | 1_4:+72121503 | None:intergenic |
| AAGAAAGCAGGAGCTGATTT+GGG | 0.415344 | 1_4:-72123315 | Msa0183260:CDS |
| GCATTCCAAATAGTCCATTC+TGG | 0.416508 | 1_4:+72120177 | None:intergenic |
| CGCATGCATAGCACGAATCC+TGG | 0.416650 | 1_4:+72123338 | None:intergenic |
| AAGCTCCGAGTAAACTAGTT+GGG | 0.422410 | 1_4:-72122683 | Msa0183260:CDS |
| TCTGTATACAACACTAAAAT+GGG | 0.425069 | 1_4:-72119416 | Msa0183260:three_prime_UTR |
| GTTTGTCAGGATGGAGTTCA+AGG | 0.426014 | 1_4:+72123628 | None:intergenic |
| GCTGGCATTGTAGGTTTAAG+AGG | 0.426481 | 1_4:+72122741 | None:intergenic |
| GTGTTTGCAAGTACAATAAA+GGG | 0.436104 | 1_4:-72119243 | Msa0183260:three_prime_UTR |
| GAAGTGGTATAAATTTGATC+AGG | 0.437733 | 1_4:+72123831 | None:intergenic |
| CGCCTGATTCTGCGGCGAGA+GGG | 0.438906 | 1_4:-72123407 | Msa0183260:CDS |
| TTTGAAGGTTTCGTGGGAAA+AGG | 0.442505 | 1_4:-72123229 | Msa0183260:CDS |
| TTGCTATGGACCATTAGGTT+GGG | 0.444827 | 1_4:+72119312 | None:intergenic |
| AGTTGAAGGAAGAGATTGCC+AGG | 0.445579 | 1_4:-72123356 | Msa0183260:CDS |
| CGTCGGGGCGTTTGTCAGGA+TGG | 0.446275 | 1_4:+72123619 | None:intergenic |
| ACTTTCCAGCAGCTAGCATC+TGG | 0.447604 | 1_4:+72119534 | None:intergenic |
| TTCCATCGCGCTGAGATTCA+CGG | 0.451319 | 1_4:+72123481 | None:intergenic |
| TCATCTTGCAAATCCGTTGT+TGG | 0.451491 | 1_4:-72122769 | Msa0183260:CDS |
| ATTATTCAGCGGATAAATTG+AGG | 0.453991 | 1_4:-72123197 | Msa0183260:CDS |
| CGTCCATTGCTTTGTTTCCA+CGG | 0.457848 | 1_4:+72123748 | None:intergenic |
| GAGCCAAACGTGAGAGAGAT+GGG | 0.458236 | 1_4:-72121506 | Msa0183260:CDS |
| CGTAGGAAGTACGAAGTTGT+TGG | 0.458915 | 1_4:+72123574 | None:intergenic |
| CTTGCTATGGACCATTAGGT+TGG | 0.460919 | 1_4:+72119311 | None:intergenic |
| CGGCGGCGTTGGGGTCGTCG+GGG | 0.464485 | 1_4:+72123604 | None:intergenic |
| GCTACAATTGGAAATGTGAT+TGG | 0.468237 | 1_4:-72122792 | Msa0183260:CDS |
| GAGGGAGGGAAGAGGAGGAT+AGG | 0.469186 | 1_4:-72123389 | Msa0183260:CDS |
| TGTTCTTATGAAACTGCAAA+AGG | 0.469467 | 1_4:-72122634 | Msa0183260:intron |
| TCTTCTGATGGTGGTGGCGG+TGG | 0.469942 | 1_4:-72123270 | Msa0183260:CDS |
| GTGCGTCCAAGCTGTAGAAT+AGG | 0.470301 | 1_4:-72119205 | Msa0183260:three_prime_UTR |
| CATACAACAGTACCAGTTAG+TGG | 0.470748 | 1_4:+72119159 | None:intergenic |
| TGCGGCGAGAGGGAGGGAAG+AGG | 0.474308 | 1_4:-72123397 | Msa0183260:CDS |
| AAAGCTTAGTCCCAACCTAA+TGG | 0.479179 | 1_4:-72119322 | Msa0183260:three_prime_UTR |
| TAGGATTGCGAAGAAGTTGA+AGG | 0.481270 | 1_4:-72123370 | Msa0183260:CDS |
| GAGAGATGGGGCTAGGGACA+AGG | 0.482808 | 1_4:-72121493 | Msa0183260:CDS |
| AGCGGAAACGCGGCGCGGCG+CGG | 0.487307 | 1_4:-72121420 | Msa0183260:CDS |
| GGGTTACCTTCCGGCGAAGA+AGG | 0.487950 | 1_4:-72123699 | Msa0183260:CDS |
| ATAAACAAGTCATGTGTTCT+GGG | 0.496377 | 1_4:-72119462 | Msa0183260:three_prime_UTR |
| TGGTGGTGGTGAACGGTTTG+GGG | 0.497327 | 1_4:-72121564 | Msa0183260:CDS |
| CGGTGGAGTTGATCAAGAAA+AGG | 0.497867 | 1_4:-72123253 | Msa0183260:CDS |
| TGGACCCCAAATTCCCCAAA+AGG | 0.498369 | 1_4:+72119347 | None:intergenic |
| ATCGATCACTACACGGTGCT+AGG | 0.503947 | 1_4:-72123720 | Msa0183260:CDS |
| GAGGTTCTGGTGGTGGTGAA+CGG | 0.507405 | 1_4:-72121571 | Msa0183260:CDS |
| TCCATAGCAAGCAAGCAGGC+TGG | 0.509428 | 1_4:-72119299 | Msa0183260:three_prime_UTR |
| TGTTTCTTTGCCGTAGAAAG+AGG | 0.509501 | 1_4:+72123773 | None:intergenic |
| CCATAGCAAGCAAGCAGGCT+GGG | 0.513962 | 1_4:-72119298 | Msa0183260:three_prime_UTR |
| GTCAGAGACCTATGGTCCCT+TGG | 0.514464 | 1_4:-72119513 | Msa0183260:three_prime_UTR |
| GGAAATTGGCGGCGGCGTTG+GGG | 0.517449 | 1_4:+72123595 | None:intergenic |
| GCTATGCATGCGAAGAAAGC+AGG | 0.519220 | 1_4:-72123327 | Msa0183260:CDS |
| GAAGCTCCGAGTAAACTAGT+TGG | 0.521066 | 1_4:-72122684 | Msa0183260:CDS |
| GGGTTCTGCTCTTGTTGTCA+TGG | 0.525705 | 1_4:-72123115 | Msa0183260:CDS |
| GAAAGCACTGCTTCTTCTGA+TGG | 0.527015 | 1_4:-72123282 | Msa0183260:CDS |
| TTGGAGAAGGGAGGTTCTGG+TGG | 0.527484 | 1_4:-72121581 | Msa0183260:intron |
| AGAGACCAGATGCTAGCTGC+TGG | 0.528089 | 1_4:-72119539 | Msa0183260:three_prime_UTR |
| GAAGCACCCCAAGAATCTGC+TGG | 0.528611 | 1_4:+72122723 | None:intergenic |
| TTATGCAACCAAGGGACCAT+AGG | 0.530211 | 1_4:+72119505 | None:intergenic |
| CCGAGTAAACTAGTTGGGGC+TGG | 0.532614 | 1_4:-72122678 | Msa0183260:CDS |
| AACGTGAGAGAGATGGGGCT+AGG | 0.535084 | 1_4:-72121500 | Msa0183260:CDS |
| TGAGCCAAACGTGAGAGAGA+TGG | 0.537992 | 1_4:-72121507 | Msa0183260:CDS |
| TTATTCAGCGGATAAATTGA+GGG | 0.541439 | 1_4:-72123196 | Msa0183260:CDS |
| CGCCGTGAATCTCAGCGCGA+TGG | 0.541631 | 1_4:-72123483 | Msa0183260:CDS |
| GCTTCTTCTGATGGTGGTGG+CGG | 0.541672 | 1_4:-72123273 | Msa0183260:CDS |
| ATAGAACCTATTCTACAGCT+TGG | 0.541942 | 1_4:+72119199 | None:intergenic |
| GAATTGAATCTTATCACCAC+AGG | 0.543960 | 1_4:+72119667 | None:intergenic |
| ACGAAGTTGTTGGAAATTGG+CGG | 0.544130 | 1_4:+72123584 | None:intergenic |
| CTGATTCTGCGGCGAGAGGG+AGG | 0.550419 | 1_4:-72123404 | Msa0183260:CDS |
| AAAGATGTCAAACACCAGAA+TGG | 0.552485 | 1_4:-72120191 | Msa0183260:CDS |
| TCGCCTGATTCTGCGGCGAG+AGG | 0.553814 | 1_4:-72123408 | Msa0183260:CDS |
| GCTGGAAAGTCAGAGACCTA+TGG | 0.556807 | 1_4:-72119521 | Msa0183260:three_prime_UTR |
| ACGTGAGAGAGATGGGGCTA+GGG | 0.559585 | 1_4:-72121499 | Msa0183260:CDS |
| CCAGCCCCAACTAGTTTACT+CGG | 0.560027 | 1_4:+72122678 | None:intergenic |
| AGAGATGGGGCTAGGGACAA+GGG | 0.562635 | 1_4:-72121492 | Msa0183260:CDS |
| GGCGAGAGGGAGGGAAGAGG+AGG | 0.562652 | 1_4:-72123394 | Msa0183260:CDS |
| TGATTCTGCGGCGAGAGGGA+GGG | 0.565858 | 1_4:-72123403 | Msa0183260:CDS |
| TTTGAACCTTCTTCGCCGGA+AGG | 0.567960 | 1_4:+72123693 | None:intergenic |
| TAGGTTTGAACCTTCTTCGC+CGG | 0.574568 | 1_4:+72123689 | None:intergenic |
| CAGTACCTAAGAATGAGAAT+CGG | 0.574643 | 1_4:+72120147 | None:intergenic |
| CAGTCCAGAAACATTTGTCA+TGG | 0.580225 | 1_4:+72119570 | None:intergenic |
| TTTGTCAGGATGGAGTTCAA+GGG | 0.583505 | 1_4:+72123629 | None:intergenic |
| TCGATCACTACACGGTGCTA+GGG | 0.586886 | 1_4:-72123719 | Msa0183260:CDS |
| GTTTCTTTGCCGTAGAAAGA+GGG | 0.588760 | 1_4:+72123774 | None:intergenic |
| ATGGTCCATAGCAAGCAAGC+AGG | 0.590664 | 1_4:-72119303 | Msa0183260:three_prime_UTR |
| ACTGCTTCTTCTGATGGTGG+TGG | 0.591689 | 1_4:-72123276 | Msa0183260:CDS |
| GTCATCTTTGAGGATATCGT+AGG | 0.604899 | 1_4:+72123557 | None:intergenic |
| AAGGTTTCGTGGGAAAAGGT+CGG | 0.605511 | 1_4:-72123225 | Msa0183260:CDS |
| AAACATTTGTCATGGACCCA+AGG | 0.613631 | 1_4:+72119578 | None:intergenic |
| AGCTCCGAGTAAACTAGTTG+GGG | 0.617187 | 1_4:-72122682 | Msa0183260:CDS |
| TGTTGTATACAGATAGCAGA+AGG | 0.624709 | 1_4:+72119426 | None:intergenic |
| TATTGTACTTGCAAACACAA+CGG | 0.625384 | 1_4:+72119248 | None:intergenic |
| ACAAGGGATCATGTGTGGAA+AGG | 0.628371 | 1_4:-72121476 | Msa0183260:CDS |
| ACACCGTGGAAACAAAGCAA+TGG | 0.629384 | 1_4:-72123751 | Msa0183260:exon |
| AAGTTGTTGGAAATTGGCGG+CGG | 0.631104 | 1_4:+72123587 | None:intergenic |
| AGCACTGCTTCTTCTGATGG+TGG | 0.636878 | 1_4:-72123279 | Msa0183260:CDS |
| TAGGGACAAGGGATCATGTG+TGG | 0.637740 | 1_4:-72121481 | Msa0183260:CDS |
| TTAAGAGGTAAAACCAACAA+CGG | 0.640873 | 1_4:+72122756 | None:intergenic |
| GGTGGTGGTGAACGGTTTGG+GGG | 0.648936 | 1_4:-72121563 | Msa0183260:CDS |
| TGGAAGTTGAAGGAGGTGTG+TGG | 0.652342 | 1_4:-72119612 | Msa0183260:CDS |
| GTCAAAGCGGAAACGCGGCG+CGG | 0.654901 | 1_4:-72121425 | Msa0183260:CDS |
| CGCACACATCGATCACTACA+CGG | 0.658367 | 1_4:-72123727 | Msa0183260:CDS |
| GTTGTCATGGCTACTAAACA+AGG | 0.665203 | 1_4:-72123102 | Msa0183260:CDS |
| TAATAATGATAATAATGCAG+AGG | 0.670445 | 1_4:+72119115 | None:intergenic |
| TCTCAGGAGTCTACAACCTG+TGG | 0.670987 | 1_4:-72119683 | Msa0183260:intron |
| TAGTTGTCAAAGCGGAAACG+CGG | 0.675944 | 1_4:-72121430 | Msa0183260:CDS |
| GGTCGGTGAAGATTATTCAG+CGG | 0.685098 | 1_4:-72123208 | Msa0183260:CDS |
| AGCCAAACGTGAGAGAGATG+GGG | 0.700664 | 1_4:-72121505 | Msa0183260:CDS |
| ACAATGCCAGCAGATTCTTG+GGG | 0.711379 | 1_4:-72122729 | Msa0183260:CDS |
| ACGGTGCTAGGGTTACCTTC+CGG | 0.766285 | 1_4:-72123708 | Msa0183260:CDS |
| TACGGCAAAGAAACACACCG+TGG | 0.783305 | 1_4:-72123765 | Msa0183260:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATATTATTAATTA+AGG | - | chr1_4:72121631-72121650 | Msa0183260:intron | 0.0% |
| !!! | TTTTGAATTTTTGAATTATT+AGG | - | chr1_4:72119906-72119925 | Msa0183260:intron | 10.0% |
| !! | TGAAATTAACAAATATAAAA+AGG | + | chr1_4:72121086-72121105 | None:intergenic | 10.0% |
| !! | CTTATTCATAATTTAAAAAT+AGG | + | chr1_4:72123093-72123112 | None:intergenic | 10.0% |
| !!! | CTATTTTTAAATTATGAATA+AGG | - | chr1_4:72123091-72123110 | Msa0183260:intron | 10.0% |
| !!! | ATTATGAATTTTTATTGAAG+TGG | + | chr1_4:72119142-72119161 | None:intergenic | 15.0% |
| !! | TTATAAAGTATACTGTTATA+CGG | + | chr1_4:72122659-72122678 | None:intergenic | 15.0% |
| !! | TAAATTATGAATAAGGTAAA+TGG | - | chr1_4:72123098-72123117 | Msa0183260:CDS | 15.0% |
| !! | AGAATGAACAATCATTTAAA+AGG | - | chr1_4:72119934-72119953 | Msa0183260:intron | 20.0% |
| !! | GAATGAACAATCATTTAAAA+GGG | - | chr1_4:72119935-72119954 | Msa0183260:intron | 20.0% |
| !! | ATTAGTGATGTAAATTTAGT+TGG | - | chr1_4:72120021-72120040 | Msa0183260:intron | 20.0% |
| !!! | TTTTATTGTGTTTTTTTTCC+AGG | - | chr1_4:72120137-72120156 | Msa0183260:intron | 20.0% |
| !!! | AAAATTTTGAATGAATCTGT+TGG | - | chr1_4:72121354-72121373 | Msa0183260:intron | 20.0% |
| !!! | TCATTTTGACTGTAAAAAAA+AGG | - | chr1_4:72121799-72121818 | Msa0183260:intron | 20.0% |
| !! | TAAACAATGTTGTTAAATAG+TGG | + | chr1_4:72122085-72122104 | None:intergenic | 20.0% |
| !! | TGTATTATTGTCCATAAATT+TGG | - | chr1_4:72122131-72122150 | Msa0183260:intron | 20.0% |
| !! | TCCATAAATTTGGTATTAAA+GGG | - | chr1_4:72122141-72122160 | Msa0183260:intron | 20.0% |
| !!! | CATTATTTTAGGGTTATATT+AGG | - | chr1_4:72122570-72122589 | Msa0183260:intron | 20.0% |
| !!! | GTTTTTTTGTTCATCAAAAT+TGG | + | chr1_4:72122598-72122617 | None:intergenic | 20.0% |
| !!! | ATTTTGATGAACAAAAAAAC+TGG | - | chr1_4:72122598-72122617 | Msa0183260:intron | 20.0% |
| !! | GTCATATAAAATATAACTTG+TGG | - | chr1_4:72122950-72122969 | Msa0183260:intron | 20.0% |
| !!! | CTTTTTAAATAGCATTTGTT+AGG | - | chr1_4:72123166-72123185 | Msa0183260:CDS | 20.0% |
| !!! | AGCTTTGTTGATATCTTTTT+GGG | + | chr1_4:72119292-72119311 | None:intergenic | 25.0% |
| !!! | AAGCTTTGTTGATATCTTTT+TGG | + | chr1_4:72119293-72119312 | None:intergenic | 25.0% |
| ! | TATTAAAGGCAGTAAGAAAA+AGG | - | chr1_4:72119818-72119837 | Msa0183260:intron | 25.0% |
| ! | ATTAAAGGCAGTAAGAAAAA+GGG | - | chr1_4:72119819-72119838 | Msa0183260:intron | 25.0% |
| !! | ACAATCATTTAAAAGGGTTT+TGG | - | chr1_4:72119941-72119960 | Msa0183260:intron | 25.0% |
| !!! | TTTAAAAGGGTTTTGGATTT+TGG | - | chr1_4:72119948-72119967 | Msa0183260:intron | 25.0% |
| !!! | TTTTGGATTTTGGAAATTTG+AGG | - | chr1_4:72119958-72119977 | Msa0183260:intron | 25.0% |
| ! | AATAGAAGGAAAAATAAAGC+GGG | + | chr1_4:72120388-72120407 | None:intergenic | 25.0% |
| ! | CAATAGAAGGAAAAATAAAG+CGG | + | chr1_4:72120389-72120408 | None:intergenic | 25.0% |
| ! | TCATTCATTAACTCAATAGA+AGG | + | chr1_4:72120402-72120421 | None:intergenic | 25.0% |
| ! | CATAAATGATGTAAGAAAGT+TGG | + | chr1_4:72120448-72120467 | None:intergenic | 25.0% |
| !! | TACAAAATGTTTTCCAATAG+TGG | + | chr1_4:72120764-72120783 | None:intergenic | 25.0% |
| ! | TGTGACTTTAATTAATCCAA+TGG | + | chr1_4:72120911-72120930 | None:intergenic | 25.0% |
| ! | TGTCTATTAATGGAAAAAAG+GGG | + | chr1_4:72121000-72121019 | None:intergenic | 25.0% |
| ! | GTGTCTATTAATGGAAAAAA+GGG | + | chr1_4:72121001-72121020 | None:intergenic | 25.0% |
| ! | AGTGTCTATTAATGGAAAAA+AGG | + | chr1_4:72121002-72121021 | None:intergenic | 25.0% |
| !!! | AGTAGTAACAGTTTTTTGTT+TGG | - | chr1_4:72121308-72121327 | Msa0183260:intron | 25.0% |
| !!! | GTAGTAACAGTTTTTTGTTT+GGG | - | chr1_4:72121309-72121328 | Msa0183260:intron | 25.0% |
| ! | GTCCATAAATTTGGTATTAA+AGG | - | chr1_4:72122140-72122159 | Msa0183260:intron | 25.0% |
| ! | ACCCTTTAATACCAAATTTA+TGG | + | chr1_4:72122145-72122164 | None:intergenic | 25.0% |
| ! | ATAATTGATGTTAGGCTATA+TGG | + | chr1_4:72122286-72122305 | None:intergenic | 25.0% |
| ! | GTTGCTATATAATTGATGTT+AGG | + | chr1_4:72122294-72122313 | None:intergenic | 25.0% |
| ! | ATTATATAGCAACCAAATTG+AGG | - | chr1_4:72122301-72122320 | Msa0183260:intron | 25.0% |
| ! | TTATATAGCAACCAAATTGA+GGG | - | chr1_4:72122302-72122321 | Msa0183260:intron | 25.0% |
| !! | TGTCTATCAGACATTATTTT+AGG | - | chr1_4:72122559-72122578 | Msa0183260:intron | 25.0% |
| !!! | GTCTATCAGACATTATTTTA+GGG | - | chr1_4:72122560-72122579 | Msa0183260:intron | 25.0% |
| ! | TGTCATCAATGATACATAAT+CGG | - | chr1_4:72122843-72122862 | Msa0183260:intron | 25.0% |
| ! | CATAATACAATACAAACCAT+AGG | + | chr1_4:72122931-72122950 | None:intergenic | 25.0% |
| ! | ATTATTAAGCATTCCATGTT+TGG | - | chr1_4:72123002-72123021 | Msa0183260:intron | 25.0% |
| ! | TTAGGCATAAGTAAAAGAAA+AGG | - | chr1_4:72123184-72123203 | Msa0183260:CDS | 25.0% |
| ! | TAGGCATAAGTAAAAGAAAA+GGG | - | chr1_4:72123185-72123204 | Msa0183260:CDS | 25.0% |
| ! | TTTAAGTACAAATCATTGAC+TGG | - | chr1_4:72123229-72123248 | Msa0183260:CDS | 25.0% |
| !!! | AGTTTTTGGTTTTCATCAAA+AGG | + | chr1_4:72123323-72123342 | None:intergenic | 25.0% |
| !! | TTTTGATGAAAACCAAAAAC+TGG | - | chr1_4:72123322-72123341 | Msa0183260:CDS | 25.0% |
| ! | ATCTGTATACAACACTAAAA+TGG | - | chr1_4:72123537-72123556 | Msa0183260:CDS | 25.0% |
| ! | TCTGTATACAACACTAAAAT+GGG | - | chr1_4:72123538-72123557 | Msa0183260:CDS | 25.0% |
| !!! | AATTCTGAGATTAACCTTTT+GGG | - | chr1_4:72123593-72123612 | Msa0183260:CDS | 25.0% |
| GAAGTGGTATAAATTTGATC+AGG | + | chr1_4:72119126-72119145 | None:intergenic | 30.0% | |
| !!! | TTTTTTACTCCCTCTTTCTA+CGG | - | chr1_4:72119171-72119190 | Msa0183260:three_prime_UTR | 30.0% |
| !!! | TGTTGATATCTTTTTGGGTT+AGG | + | chr1_4:72119287-72119306 | None:intergenic | 30.0% |
| !! | TGATCAAGAAAAGGTTTTGA+AGG | - | chr1_4:72119710-72119729 | Msa0183260:intron | 30.0% |
| ATTATTCAGCGGATAAATTG+AGG | - | chr1_4:72119757-72119776 | Msa0183260:intron | 30.0% | |
| TTATTCAGCGGATAAATTGA+GGG | - | chr1_4:72119758-72119777 | Msa0183260:intron | 30.0% | |
| ! | AGGGAATTGTTTTCGAAATT+CGG | - | chr1_4:72119777-72119796 | Msa0183260:intron | 30.0% |
| ! | GTTGAAGACGTTGTTATTAA+AGG | - | chr1_4:72119804-72119823 | Msa0183260:intron | 30.0% |
| !! | TTGGAAATTTGAGGTTTTGT+TGG | - | chr1_4:72119967-72119986 | Msa0183260:intron | 30.0% |
| ATTTATGTTGCTATGTTCTG+AGG | - | chr1_4:72120079-72120098 | Msa0183260:intron | 30.0% | |
| TTTATGTTGCTATGTTCTGA+GGG | - | chr1_4:72120080-72120099 | Msa0183260:intron | 30.0% | |
| TTAAGAGGTAAAACCAACAA+CGG | + | chr1_4:72120201-72120220 | None:intergenic | 30.0% | |
| TGTTCTTATGAAACTGCAAA+AGG | - | chr1_4:72120320-72120339 | Msa0183260:intron | 30.0% | |
| AGGAAAAATGTACAAGCAAA+TGG | + | chr1_4:72120350-72120369 | None:intergenic | 30.0% | |
| ATAGAAGGAAAAATAAAGCG+GGG | + | chr1_4:72120387-72120406 | None:intergenic | 30.0% | |
| AGTAGTGAATGTGAATCATT+AGG | - | chr1_4:72120498-72120517 | Msa0183260:intron | 30.0% | |
| ATGTTGTCAATCAAAGTTTG+TGG | - | chr1_4:72120545-72120564 | Msa0183260:intron | 30.0% | |
| TCAAAGTTTGTGGAAAATAG+CGG | - | chr1_4:72120555-72120574 | Msa0183260:intron | 30.0% | |
| GAATAATAATTGAGAGCCAT+TGG | - | chr1_4:72120892-72120911 | Msa0183260:intron | 30.0% | |
| !! | CGTGTTCATTTTTCAATGTT+GGG | + | chr1_4:72121051-72121070 | None:intergenic | 30.0% |
| TGTCTCCTTATGTGTATATA+TGG | - | chr1_4:72121156-72121175 | Msa0183260:intron | 30.0% | |
| TCCTTATGTGTATATATGGA+AGG | - | chr1_4:72121160-72121179 | Msa0183260:intron | 30.0% | |
| CCTTATGTGTATATATGGAA+GGG | - | chr1_4:72121161-72121180 | Msa0183260:intron | 30.0% | |
| AATGGTCGATAACATGAATT+GGG | + | chr1_4:72121206-72121225 | None:intergenic | 30.0% | |
| TAATGGTCGATAACATGAAT+TGG | + | chr1_4:72121207-72121226 | None:intergenic | 30.0% | |
| ATCAGAACCAAATTTGAGAA+AGG | - | chr1_4:72121255-72121274 | Msa0183260:intron | 30.0% | |
| TCAGAACCAAATTTGAGAAA+GGG | - | chr1_4:72121256-72121275 | Msa0183260:intron | 30.0% | |
| ! | TTTTGTCATAGTTGTCAAAG+CGG | - | chr1_4:72121516-72121535 | Msa0183260:CDS | 30.0% |
| CAGTCAAAATGAAGAAGAAA+GGG | + | chr1_4:72121791-72121810 | None:intergenic | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | + | chr1_4:72121792-72121811 | None:intergenic | 30.0% | |
| ! | TTAACAGAGATGAGATTTTG+TGG | - | chr1_4:72121826-72121845 | Msa0183260:intron | 30.0% |
| !! | TTGTTAAATAGTGGTTTTGC+GGG | + | chr1_4:72122076-72122095 | None:intergenic | 30.0% |
| !! | GTTGTTAAATAGTGGTTTTG+CGG | + | chr1_4:72122077-72122096 | None:intergenic | 30.0% |
| AATACGAAACTGAAATCCAA+GGG | + | chr1_4:72122176-72122195 | None:intergenic | 30.0% | |
| AAATACGAAACTGAAATCCA+AGG | + | chr1_4:72122177-72122196 | None:intergenic | 30.0% | |
| ! | TGGATTTCAGTTTCGTATTT+TGG | - | chr1_4:72122177-72122196 | Msa0183260:intron | 30.0% |
| CAAAAACACTCAAATTCCAT+TGG | + | chr1_4:72122218-72122237 | None:intergenic | 30.0% | |
| TATATAGCAACCAAATTGAG+GGG | - | chr1_4:72122303-72122322 | Msa0183260:intron | 30.0% | |
| !! | TCTTGCAATTGATAGTTTTC+TGG | - | chr1_4:72122361-72122380 | Msa0183260:intron | 30.0% |
| ! | AGCCTTATCAACAAATAAAC+TGG | - | chr1_4:72122456-72122475 | Msa0183260:intron | 30.0% |
| ! | GTCCAGTTTATTTGTTGATA+AGG | + | chr1_4:72122461-72122480 | None:intergenic | 30.0% |
| TATAGCAACAAATCCGAAAA+TGG | + | chr1_4:72122487-72122506 | None:intergenic | 30.0% | |
| TAGAAACAAGTCAAGAAAAC+AGG | + | chr1_4:72122711-72122730 | None:intergenic | 30.0% | |
| AGGCATAAGTAAAAGAAAAG+GGG | - | chr1_4:72123186-72123205 | Msa0183260:CDS | 30.0% | |
| !!! | TTTTGGTTTTCATCAAAAGG+AGG | + | chr1_4:72123320-72123339 | None:intergenic | 30.0% |
| ! | TCAAGTTTTTATGCAACCAA+GGG | + | chr1_4:72123460-72123479 | None:intergenic | 30.0% |
| !! | TTCAAGTTTTTATGCAACCA+AGG | + | chr1_4:72123461-72123480 | None:intergenic | 30.0% |
| AATAAACAAGTCATGTGTTC+TGG | - | chr1_4:72123491-72123510 | Msa0183260:CDS | 30.0% | |
| ATAAACAAGTCATGTGTTCT+GGG | - | chr1_4:72123492-72123511 | Msa0183260:CDS | 30.0% | |
| AAAGGTTAATCTCAGAATTC+TGG | + | chr1_4:72123592-72123611 | None:intergenic | 30.0% | |
| !!! | GAATTCTGAGATTAACCTTT+TGG | - | chr1_4:72123592-72123611 | Msa0183260:CDS | 30.0% |
| !!! | ATTCTGAGATTAACCTTTTG+GGG | - | chr1_4:72123594-72123613 | Msa0183260:CDS | 30.0% |
| !! | ATTAACCTTTTGGGGAATTT+GGG | - | chr1_4:72123602-72123621 | Msa0183260:CDS | 30.0% |
| TATTGTACTTGCAAACACAA+CGG | + | chr1_4:72123709-72123728 | None:intergenic | 30.0% | |
| TGTGTTTGCAAGTACAATAA+AGG | - | chr1_4:72123710-72123729 | Msa0183260:CDS | 30.0% | |
| GTGTTTGCAAGTACAATAAA+GGG | - | chr1_4:72123711-72123730 | Msa0183260:CDS | 30.0% | |
| AGTACGAAGTTGTTGGAAAT+TGG | + | chr1_4:72119376-72119395 | None:intergenic | 35.0% | |
| ! | CAAGATCGGAAACCATTTTA+CGG | + | chr1_4:72119503-72119522 | None:intergenic | 35.0% |
| !!! | AAAAGGTTTTGAAGGTTTCG+TGG | - | chr1_4:72119718-72119737 | Msa0183260:intron | 35.0% |
| !!! | AAAGGTTTTGAAGGTTTCGT+GGG | - | chr1_4:72119719-72119738 | Msa0183260:intron | 35.0% |
| ! | TTTTTCCAGGTTGCTACAAT+TGG | - | chr1_4:72120150-72120169 | Msa0183260:intron | 35.0% |
| GCTACAATTGGAAATGTGAT+TGG | - | chr1_4:72120162-72120181 | Msa0183260:CDS | 35.0% | |
| GCGGGGAAAAATATTAAAAC+AGG | + | chr1_4:72120370-72120389 | None:intergenic | 35.0% | |
| CATTTATGTCAGATAGCATC+TGG | - | chr1_4:72120460-72120479 | Msa0183260:intron | 35.0% | |
| CAAAGTTTGTGGAAAATAGC+GGG | - | chr1_4:72120556-72120575 | Msa0183260:intron | 35.0% | |
| ! | GTGACTATAGCACTTTTACA+TGG | + | chr1_4:72120596-72120615 | None:intergenic | 35.0% |
| ATGTTGTCAATTGAAGTTCG+CGG | - | chr1_4:72120677-72120696 | Msa0183260:intron | 35.0% | |
| ! | AATAGTGGTAGTGACTATAG+CGG | + | chr1_4:72120749-72120768 | None:intergenic | 35.0% |
| ATTCAGATATGCAAAACCTG+TGG | - | chr1_4:72120822-72120841 | Msa0183260:intron | 35.0% | |
| TCGTAATAGTTCACCAATGA+GGG | + | chr1_4:72120874-72120893 | None:intergenic | 35.0% | |
| TTCGTAATAGTTCACCAATG+AGG | + | chr1_4:72120875-72120894 | None:intergenic | 35.0% | |
| GGTGAACAAGTGTCTATTAA+TGG | + | chr1_4:72121010-72121029 | None:intergenic | 35.0% | |
| GGGAAATGAGAATGTGAAAA+GGG | + | chr1_4:72121031-72121050 | None:intergenic | 35.0% | |
| TGGGAAATGAGAATGTGAAA+AGG | + | chr1_4:72121032-72121051 | None:intergenic | 35.0% | |
| !! | GCGTGTTCATTTTTCAATGT+TGG | + | chr1_4:72121052-72121071 | None:intergenic | 35.0% |
| TCAAACAGCAATGTTCATAC+TGG | - | chr1_4:72121112-72121131 | Msa0183260:intron | 35.0% | |
| ACAAAAGATGTTGGATCTGA+GGG | + | chr1_4:72121139-72121158 | None:intergenic | 35.0% | |
| CATAAGGAGACAAAAGATGT+TGG | + | chr1_4:72121148-72121167 | None:intergenic | 35.0% | |
| CCCTTCCATATATACACATA+AGG | + | chr1_4:72121164-72121183 | None:intergenic | 35.0% | |
| ! | ATGAGATCTGTGGTTTGTAA+TGG | + | chr1_4:72121224-72121243 | None:intergenic | 35.0% |
| CAAAGAGAAAATGAGATCTG+TGG | + | chr1_4:72121234-72121253 | None:intergenic | 35.0% | |
| TGAACACCCTTTCTCAAATT+TGG | + | chr1_4:72121265-72121284 | None:intergenic | 35.0% | |
| !! | AATTTGAGAAAGGGTGTTCA+TGG | - | chr1_4:72121265-72121284 | Msa0183260:intron | 35.0% |
| TGTTCATGGATTTCATAGTG+AGG | - | chr1_4:72121279-72121298 | Msa0183260:intron | 35.0% | |
| TTGAATGAATCTGTTGGAGA+AGG | - | chr1_4:72121360-72121379 | Msa0183260:intron | 35.0% | |
| TGAATGAATCTGTTGGAGAA+GGG | - | chr1_4:72121361-72121380 | Msa0183260:intron | 35.0% | |
| GGAAGAAGTGAAAGATTGAT+TGG | + | chr1_4:72121770-72121789 | None:intergenic | 35.0% | |
| AAAACCTCTGTTGTCAATAG+CGG | + | chr1_4:72122027-72122046 | None:intergenic | 35.0% | |
| TAAAGGGTTTATATTGCCCT+TGG | - | chr1_4:72122157-72122176 | Msa0183260:intron | 35.0% | |
| GTTATTGTAGTTGAAGCCAA+TGG | - | chr1_4:72122199-72122218 | Msa0183260:intron | 35.0% | |
| ATATAGCAACCAAATTGAGG+GGG | - | chr1_4:72122304-72122323 | Msa0183260:intron | 35.0% | |
| AAACTATCAATTGCAAGAGC+TGG | + | chr1_4:72122359-72122378 | None:intergenic | 35.0% | |
| ! | TAAACTGGACACACCATTTT+CGG | - | chr1_4:72122471-72122490 | Msa0183260:intron | 35.0% |
| TGTTGCTATATACTTGATGC+CGG | - | chr1_4:72122497-72122516 | Msa0183260:intron | 35.0% | |
| AGTATACTGTTATACGGCAA+TGG | + | chr1_4:72122653-72122672 | None:intergenic | 35.0% | |
| AGGTAAGATATAAACGACAG+AGG | + | chr1_4:72122691-72122710 | None:intergenic | 35.0% | |
| !! | TCTTGACTTGTTTCTAATGC+AGG | - | chr1_4:72122715-72122734 | Msa0183260:CDS | 35.0% |
| AAAGATGTCAAACACCAGAA+TGG | - | chr1_4:72122763-72122782 | Msa0183260:CDS | 35.0% | |
| !! | AAACACCAGAATGGACTATT+TGG | - | chr1_4:72122772-72122791 | Msa0183260:CDS | 35.0% |
| CAGTACCTAAGAATGAGAAT+CGG | + | chr1_4:72122810-72122829 | None:intergenic | 35.0% | |
| AAAACTCGTTACAAAGACTC+AGG | + | chr1_4:72122880-72122899 | None:intergenic | 35.0% | |
| GTAGTATACTAATCCTCGTA+TGG | + | chr1_4:72122904-72122923 | None:intergenic | 35.0% | |
| TTAGTATACTACAGAGCCTA+TGG | - | chr1_4:72122912-72122931 | Msa0183260:intron | 35.0% | |
| GTAAAGATACTTGCCAAACA+TGG | + | chr1_4:72123018-72123037 | None:intergenic | 35.0% | |
| TGTTTGGCAAGTATCTTTAC+TGG | - | chr1_4:72123018-72123037 | Msa0183260:intron | 35.0% | |
| GGCATAAGTAAAAGAAAAGG+GGG | - | chr1_4:72123187-72123206 | Msa0183260:CDS | 35.0% | |
| GAATTGAATCTTATCACCAC+AGG | + | chr1_4:72123290-72123309 | None:intergenic | 35.0% | |
| AACCAAAAACTGGAAGTTGA+AGG | - | chr1_4:72123332-72123351 | Msa0183260:CDS | 35.0% | |
| TGTTGTATACAGATAGCAGA+AGG | + | chr1_4:72123531-72123550 | None:intergenic | 35.0% | |
| !! | GATTAACCTTTTGGGGAATT+TGG | - | chr1_4:72123601-72123620 | Msa0183260:CDS | 35.0% |
| !! | TTAACCTTTTGGGGAATTTG+GGG | - | chr1_4:72123603-72123622 | Msa0183260:CDS | 35.0% |
| ATTGTACTTGCAAACACAAC+GGG | + | chr1_4:72123708-72123727 | None:intergenic | 35.0% | |
| ATAGAACCTATTCTACAGCT+TGG | + | chr1_4:72123758-72123777 | None:intergenic | 35.0% | |
| TCAATGATTGTTCCACTAAC+TGG | - | chr1_4:72123783-72123802 | Msa0183260:five_prime_UTR | 35.0% | |
| GTTTCTTTGCCGTAGAAAGA+GGG | + | chr1_4:72119183-72119202 | None:intergenic | 40.0% | |
| TGTTTCTTTGCCGTAGAAAG+AGG | + | chr1_4:72119184-72119203 | None:intergenic | 40.0% | |
| TTTGTCAGGATGGAGTTCAA+GGG | + | chr1_4:72119328-72119347 | None:intergenic | 40.0% | |
| ACGAAGTTGTTGGAAATTGG+CGG | + | chr1_4:72119373-72119392 | None:intergenic | 40.0% | |
| ! | GTCATCTTTGAGGATATCGT+AGG | + | chr1_4:72119400-72119419 | None:intergenic | 40.0% |
| ! | TTCGAGCTTTGTCATCTTTG+AGG | + | chr1_4:72119410-72119429 | None:intergenic | 40.0% |
| !! | ACGCTCTCTCTTTTCAAGAT+CGG | + | chr1_4:72119517-72119536 | None:intergenic | 40.0% |
| TAGGATTGCGAAGAAGTTGA+AGG | - | chr1_4:72119584-72119603 | Msa0183260:three_prime_UTR | 40.0% | |
| ! | AAGAAAGCAGGAGCTGATTT+GGG | - | chr1_4:72119639-72119658 | Msa0183260:CDS | 40.0% |
| TTTGAAGGTTTCGTGGGAAA+AGG | - | chr1_4:72119725-72119744 | Msa0183260:intron | 40.0% | |
| GTTGTCATGGCTACTAAACA+AGG | - | chr1_4:72119852-72119871 | Msa0183260:intron | 40.0% | |
| !!! | GGTTTTGTTGGTGTTGCTAA+TGG | - | chr1_4:72119979-72119998 | Msa0183260:intron | 40.0% |
| ! | GTTGGAGTTTGTTTCGAATG+AGG | - | chr1_4:72120039-72120058 | Msa0183260:intron | 40.0% |
| !! | TGCTATGTTCTGAGGGTTTA+AGG | - | chr1_4:72120087-72120106 | Msa0183260:intron | 40.0% |
| CATTTCCAATTGTAGCAACC+TGG | + | chr1_4:72120158-72120177 | None:intergenic | 40.0% | |
| TCATCTTGCAAATCCGTTGT+TGG | - | chr1_4:72120185-72120204 | Msa0183260:CDS | 40.0% | |
| TACAATGCCAGCAGATTCTT+GGG | - | chr1_4:72120224-72120243 | Msa0183260:intron | 40.0% | |
| AAGCTCCGAGTAAACTAGTT+GGG | - | chr1_4:72120271-72120290 | Msa0183260:intron | 40.0% | |
| ! | GCACTTTTACATGGCAGAAT+TGG | + | chr1_4:72120587-72120606 | None:intergenic | 40.0% |
| GCTATAGTCACTACCACTAT+TGG | - | chr1_4:72120748-72120767 | Msa0183260:intron | 40.0% | |
| ATGCAAAACCTGTGGATTCT+TGG | - | chr1_4:72120830-72120849 | Msa0183260:intron | 40.0% | |
| TGCAAAACCTGTGGATTCTT+GGG | - | chr1_4:72120831-72120850 | Msa0183260:intron | 40.0% | |
| CAAAAGATGTTGGATCTGAG+GGG | + | chr1_4:72121138-72121157 | None:intergenic | 40.0% | |
| GACAAAAGATGTTGGATCTG+AGG | + | chr1_4:72121140-72121159 | None:intergenic | 40.0% | |
| TCATGGATTTCATAGTGAGG+CGG | - | chr1_4:72121282-72121301 | Msa0183260:intron | 40.0% | |
| !! | TGGGGGTTTTAACAGTATTG+TGG | - | chr1_4:72121408-72121427 | Msa0183260:CDS | 40.0% |
| GATTGGAGATCTAGAGATCT+AGG | + | chr1_4:72121753-72121772 | None:intergenic | 40.0% | |
| !! | TTAAATAGTGGTTTTGCGGG+TGG | + | chr1_4:72122073-72122092 | None:intergenic | 40.0% |
| TACAGAATTCCCCCTCAATT+TGG | + | chr1_4:72122316-72122335 | None:intergenic | 40.0% | |
| AATTGAGGGGGAATTCTGTA+AGG | - | chr1_4:72122316-72122335 | Msa0183260:intron | 40.0% | |
| GTTGCTATATACTTGATGCC+GGG | - | chr1_4:72122498-72122517 | Msa0183260:intron | 40.0% | |
| ACAGATTGTACAGAGAAGAG+AGG | + | chr1_4:72122625-72122644 | None:intergenic | 40.0% | |
| !! | TGACTTGTTTCTAATGCAGG+CGG | - | chr1_4:72122718-72122737 | Msa0183260:CDS | 40.0% |
| GCATTCCAAATAGTCCATTC+TGG | + | chr1_4:72122780-72122799 | None:intergenic | 40.0% | |
| !! | ATTCGCCGATTCTCATTCTT+AGG | - | chr1_4:72122802-72122821 | Msa0183260:intron | 40.0% |
| CGATTCTCATTCTTAGGTAC+TGG | - | chr1_4:72122808-72122827 | Msa0183260:intron | 40.0% | |
| ! | GTAACGAGTTTTACCATACG+AGG | - | chr1_4:72122888-72122907 | Msa0183260:intron | 40.0% |
| ! | TTGTGGCTGCTATTGTTGTT+GGG | - | chr1_4:72122967-72122986 | Msa0183260:intron | 40.0% |
| !! | ATTGACTGGTTTGTTGTGCT+TGG | - | chr1_4:72123243-72123262 | Msa0183260:CDS | 40.0% |
| ! | CTCCTTCAACTTCCAGTTTT+TGG | + | chr1_4:72123337-72123356 | None:intergenic | 40.0% |
| CAAAAACTGGAAGTTGAAGG+AGG | - | chr1_4:72123335-72123354 | Msa0183260:CDS | 40.0% | |
| AAACATTTGTCATGGACCCA+AGG | + | chr1_4:72123379-72123398 | None:intergenic | 40.0% | |
| CAGTCCAGAAACATTTGTCA+TGG | + | chr1_4:72123387-72123406 | None:intergenic | 40.0% | |
| AAAGCTTAGTCCCAACCTAA+TGG | - | chr1_4:72123632-72123651 | Msa0183260:CDS | 40.0% | |
| TTGCTATGGACCATTAGGTT+GGG | + | chr1_4:72123645-72123664 | None:intergenic | 40.0% | |
| GCTGGGAATTGGACAAAAAA+TGG | - | chr1_4:72123673-72123692 | Msa0183260:CDS | 40.0% | |
| CATACAACAGTACCAGTTAG+TGG | + | chr1_4:72123798-72123817 | None:intergenic | 40.0% | |
| ACACCGTGGAAACAAAGCAA+TGG | - | chr1_4:72119203-72119222 | Msa0183260:three_prime_UTR | 45.0% | |
| !! | CGTCCATTGCTTTGTTTCCA+CGG | + | chr1_4:72119209-72119228 | None:intergenic | 45.0% |
| TAGGTTTGAACCTTCTTCGC+CGG | + | chr1_4:72119268-72119287 | None:intergenic | 45.0% | |
| GTTTGTCAGGATGGAGTTCA+AGG | + | chr1_4:72119329-72119348 | None:intergenic | 45.0% | |
| AAGTTGTTGGAAATTGGCGG+CGG | + | chr1_4:72119370-72119389 | None:intergenic | 45.0% | |
| ! | CGTAGGAAGTACGAAGTTGT+TGG | + | chr1_4:72119383-72119402 | None:intergenic | 45.0% |
| CGATGGAAAACGCCGTAAAA+TGG | - | chr1_4:72119488-72119507 | Msa0183260:three_prime_UTR | 45.0% | |
| !!! | AGCTTTTTCGCCTGATTCTG+CGG | - | chr1_4:72119539-72119558 | Msa0183260:three_prime_UTR | 45.0% |
| AGTTGAAGGAAGAGATTGCC+AGG | - | chr1_4:72119598-72119617 | Msa0183260:exon | 45.0% | |
| GAAGAAAGCAGGAGCTGATT+TGG | - | chr1_4:72119638-72119657 | Msa0183260:CDS | 45.0% | |
| !! | GAAAGCACTGCTTCTTCTGA+TGG | - | chr1_4:72119672-72119691 | Msa0183260:CDS | 45.0% |
| ! | CGGTGGAGTTGATCAAGAAA+AGG | - | chr1_4:72119701-72119720 | Msa0183260:intron | 45.0% |
| AAGGTTTCGTGGGAAAAGGT+CGG | - | chr1_4:72119729-72119748 | Msa0183260:intron | 45.0% | |
| GGTCGGTGAAGATTATTCAG+CGG | - | chr1_4:72119746-72119765 | Msa0183260:intron | 45.0% | |
| !! | TTGGTGTTGCTAATGGTGCT+GGG | - | chr1_4:72119986-72120005 | Msa0183260:intron | 45.0% |
| GCTGGCATTGTAGGTTTAAG+AGG | + | chr1_4:72120216-72120235 | None:intergenic | 45.0% | |
| CAAGAATCTGCTGGCATTGT+AGG | + | chr1_4:72120225-72120244 | None:intergenic | 45.0% | |
| CTACAATGCCAGCAGATTCT+TGG | - | chr1_4:72120223-72120242 | Msa0183260:intron | 45.0% | |
| ACAATGCCAGCAGATTCTTG+GGG | - | chr1_4:72120225-72120244 | Msa0183260:intron | 45.0% | |
| ! | ACTAGTTTACTCGGAGCTTC+AGG | + | chr1_4:72120270-72120289 | None:intergenic | 45.0% |
| GAAGCTCCGAGTAAACTAGT+TGG | - | chr1_4:72120270-72120289 | Msa0183260:intron | 45.0% | |
| AGCTCCGAGTAAACTAGTTG+GGG | - | chr1_4:72120272-72120291 | Msa0183260:intron | 45.0% | |
| !! | GGCTGGTTATCAAGCTTTTG+AGG | - | chr1_4:72120293-72120312 | Msa0183260:intron | 45.0% |
| TTGAAGTTCGCGGAACATAG+CGG | - | chr1_4:72120687-72120706 | Msa0183260:intron | 45.0% | |
| GGTTCAAAGAAGTCCCTCAT+TGG | - | chr1_4:72120858-72120877 | Msa0183260:intron | 45.0% | |
| TGGAAAAAAGGGGAAGCAAG+CGG | + | chr1_4:72120990-72121009 | None:intergenic | 45.0% | |
| ATGAATCTGTTGGAGAAGGG+AGG | - | chr1_4:72121364-72121383 | Msa0183260:intron | 45.0% | |
| ACAAGGGATCATGTGTGGAA+AGG | - | chr1_4:72121478-72121497 | Msa0183260:CDS | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | - | chr1_4:72121524-72121543 | Msa0183260:CDS | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | + | chr1_4:72122017-72122036 | None:intergenic | 45.0% | |
| TAGACCGCTATTGACAACAG+AGG | - | chr1_4:72122020-72122039 | Msa0183260:intron | 45.0% | |
| ACCGAAAATGTTGTGTGACC+CGG | + | chr1_4:72122519-72122538 | None:intergenic | 45.0% | |
| CGGCAGCAAAGCAAAAATGA+TGG | - | chr1_4:72122738-72122757 | Msa0183260:CDS | 45.0% | |
| CTTGTGGCTGCTATTGTTGT+TGG | - | chr1_4:72122966-72122985 | Msa0183260:intron | 45.0% | |
| ! | TGTGGCTGCTATTGTTGTTG+GGG | - | chr1_4:72122968-72122987 | Msa0183260:intron | 45.0% |
| GGTAAATGGTCGAGATTGTG+AGG | - | chr1_4:72123112-72123131 | Msa0183260:CDS | 45.0% | |
| ! | GTTGTGCTTGGTTGATTCTC+AGG | - | chr1_4:72123255-72123274 | Msa0183260:CDS | 45.0% |
| !!! | TGTGGTTTTAGTGCAGCCTT+GGG | - | chr1_4:72123360-72123379 | Msa0183260:CDS | 45.0% |
| GGGTCCATGACAAATGTTTC+TGG | - | chr1_4:72123380-72123399 | Msa0183260:CDS | 45.0% | |
| TTATGCAACCAAGGGACCAT+AGG | + | chr1_4:72123452-72123471 | None:intergenic | 45.0% | |
| ! | TCATGTGTTCTGGGTCAGTT+TGG | - | chr1_4:72123501-72123520 | Msa0183260:CDS | 45.0% |
| ! | CTTGCTATGGACCATTAGGT+TGG | + | chr1_4:72123646-72123665 | None:intergenic | 45.0% |
| !! | CTTGCTTGCTATGGACCATT+AGG | + | chr1_4:72123650-72123669 | None:intergenic | 45.0% |
| TACGGCAAAGAAACACACCG+TGG | - | chr1_4:72119189-72119208 | Msa0183260:three_prime_UTR | 50.0% | |
| CGCACACATCGATCACTACA+CGG | - | chr1_4:72119227-72119246 | Msa0183260:three_prime_UTR | 50.0% | |
| ATCGATCACTACACGGTGCT+AGG | - | chr1_4:72119234-72119253 | Msa0183260:three_prime_UTR | 50.0% | |
| ! | TCGATCACTACACGGTGCTA+GGG | - | chr1_4:72119235-72119254 | Msa0183260:three_prime_UTR | 50.0% |
| TTTGAACCTTCTTCGCCGGA+AGG | + | chr1_4:72119264-72119283 | None:intergenic | 50.0% | |
| AGGATGGAGTTCAAGGGCTT+TGG | + | chr1_4:72119322-72119341 | None:intergenic | 50.0% | |
| TTCCATCGCGCTGAGATTCA+CGG | + | chr1_4:72119476-72119495 | None:intergenic | 50.0% | |
| GCTATGCATGCGAAGAAAGC+AGG | - | chr1_4:72119627-72119646 | Msa0183260:CDS | 50.0% | |
| AGCACTGCTTCTTCTGATGG+TGG | - | chr1_4:72119675-72119694 | Msa0183260:CDS | 50.0% | |
| !! | ACTGCTTCTTCTGATGGTGG+TGG | - | chr1_4:72119678-72119697 | Msa0183260:CDS | 50.0% |
| ! | GGGTTCTGCTCTTGTTGTCA+TGG | - | chr1_4:72119839-72119858 | Msa0183260:intron | 50.0% |
| !! | GTTGGTGTTGCTAATGGTGC+TGG | - | chr1_4:72119985-72120004 | Msa0183260:intron | 50.0% |
| ! | CCAGCCCCAACTAGTTTACT+CGG | + | chr1_4:72120279-72120298 | None:intergenic | 50.0% |
| TGAAGTTCGCGGAACATAGC+GGG | - | chr1_4:72120688-72120707 | Msa0183260:intron | 50.0% | |
| GGAAAAAAGGGGAAGCAAGC+GGG | + | chr1_4:72120989-72121008 | None:intergenic | 50.0% | |
| TGAGCCAAACGTGAGAGAGA+TGG | - | chr1_4:72121447-72121466 | Msa0183260:CDS | 50.0% | |
| GAGCCAAACGTGAGAGAGAT+GGG | - | chr1_4:72121448-72121467 | Msa0183260:CDS | 50.0% | |
| AGCCAAACGTGAGAGAGATG+GGG | - | chr1_4:72121449-72121468 | Msa0183260:CDS | 50.0% | |
| TAGGGACAAGGGATCATGTG+TGG | - | chr1_4:72121473-72121492 | Msa0183260:CDS | 50.0% | |
| AGGCAAACGCGGAACAAAAG+CGG | + | chr1_4:72121940-72121959 | None:intergenic | 50.0% | |
| ! | GCCGGGTCACACAACATTTT+CGG | - | chr1_4:72122515-72122534 | Msa0183260:intron | 50.0% |
| ! | GTGGCTGCTATTGTTGTTGG+GGG | - | chr1_4:72122969-72122988 | Msa0183260:intron | 50.0% |
| TCTCAGGAGTCTACAACCTG+TGG | - | chr1_4:72123271-72123290 | Msa0183260:CDS | 50.0% | |
| ! | TGGAAGTTGAAGGAGGTGTG+TGG | - | chr1_4:72123342-72123361 | Msa0183260:CDS | 50.0% |
| !!! | GTGTGGTTTTAGTGCAGCCT+TGG | - | chr1_4:72123359-72123378 | Msa0183260:CDS | 50.0% |
| ACTTTCCAGCAGCTAGCATC+TGG | + | chr1_4:72123423-72123442 | None:intergenic | 50.0% | |
| GCTGGAAAGTCAGAGACCTA+TGG | - | chr1_4:72123433-72123452 | Msa0183260:CDS | 50.0% | |
| TGGACCCCAAATTCCCCAAA+AGG | + | chr1_4:72123610-72123629 | None:intergenic | 50.0% | |
| AGGTTGGGACTAAGCTTTGC+TGG | + | chr1_4:72123630-72123649 | None:intergenic | 50.0% | |
| ATGGTCCATAGCAAGCAAGC+AGG | - | chr1_4:72123651-72123670 | Msa0183260:CDS | 50.0% | |
| GTGCGTCCAAGCTGTAGAAT+AGG | - | chr1_4:72123749-72123768 | Msa0183260:exon | 50.0% | |
| ! | ACGGTGCTAGGGTTACCTTC+CGG | - | chr1_4:72119246-72119265 | Msa0183260:three_prime_UTR | 55.0% |
| CGCATGCATAGCACGAATCC+TGG | + | chr1_4:72119619-72119638 | None:intergenic | 55.0% | |
| !! | GCTTCTTCTGATGGTGGTGG+CGG | - | chr1_4:72119681-72119700 | Msa0183260:intron | 55.0% |
| ! | GAAGCACCCCAAGAATCTGC+TGG | + | chr1_4:72120234-72120253 | None:intergenic | 55.0% |
| CCGAGTAAACTAGTTGGGGC+TGG | - | chr1_4:72120276-72120295 | Msa0183260:intron | 55.0% | |
| AACCTGTGGATTCTTGGGCG+AGG | - | chr1_4:72120836-72120855 | Msa0183260:intron | 55.0% | |
| ACCTGTGGATTCTTGGGCGA+GGG | - | chr1_4:72120837-72120856 | Msa0183260:intron | 55.0% | |
| CTGTTGGAGAAGGGAGGTTC+TGG | - | chr1_4:72121370-72121389 | Msa0183260:intron | 55.0% | |
| ! | TTGGAGAAGGGAGGTTCTGG+TGG | - | chr1_4:72121373-72121392 | Msa0183260:intron | 55.0% |
| !! | GAGGTTCTGGTGGTGGTGAA+CGG | - | chr1_4:72121383-72121402 | Msa0183260:intron | 55.0% |
| !! | TCTGGTGGTGGTGAACGGTT+TGG | - | chr1_4:72121388-72121407 | Msa0183260:intron | 55.0% |
| !! | CTGGTGGTGGTGAACGGTTT+GGG | - | chr1_4:72121389-72121408 | Msa0183260:intron | 55.0% |
| !! | TGGTGGTGGTGAACGGTTTG+GGG | - | chr1_4:72121390-72121409 | Msa0183260:intron | 55.0% |
| AGCCCCATCTCTCTCACGTT+TGG | + | chr1_4:72121454-72121473 | None:intergenic | 55.0% | |
| AACGTGAGAGAGATGGGGCT+AGG | - | chr1_4:72121454-72121473 | Msa0183260:CDS | 55.0% | |
| ACGTGAGAGAGATGGGGCTA+GGG | - | chr1_4:72121455-72121474 | Msa0183260:CDS | 55.0% | |
| AGAGATGGGGCTAGGGACAA+GGG | - | chr1_4:72121462-72121481 | Msa0183260:CDS | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | - | chr1_4:72121555-72121574 | Msa0183260:CDS | 55.0% | |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | + | chr1_4:72121564-72121583 | None:intergenic | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | + | chr1_4:72121565-72121584 | None:intergenic | 55.0% |
| GGTCAATGCGGGCAAAAAGC+GGG | + | chr1_4:72121897-72121916 | None:intergenic | 55.0% | |
| GGGTCAATGCGGGCAAAAAG+CGG | + | chr1_4:72121898-72121917 | None:intergenic | 55.0% | |
| GGCAAAAAGCGGGTCAATGC+GGG | + | chr1_4:72121908-72121927 | None:intergenic | 55.0% | |
| GGGCAAAAAGCGGGTCAATG+CGG | + | chr1_4:72121909-72121928 | None:intergenic | 55.0% | |
| GAACAAAAGCGGGTCAACGC+GGG | + | chr1_4:72121929-72121948 | None:intergenic | 55.0% | |
| GGAACAAAAGCGGGTCAACG+CGG | + | chr1_4:72121930-72121949 | None:intergenic | 55.0% | |
| GGCAAACGCGGAACAAAAGC+GGG | + | chr1_4:72121939-72121958 | None:intergenic | 55.0% | |
| ! | GTTTTGCGGGTGGCTTCTAG+GGG | + | chr1_4:72122063-72122082 | None:intergenic | 55.0% |
| ! | GGTTTTGCGGGTGGCTTCTA+GGG | + | chr1_4:72122064-72122083 | None:intergenic | 55.0% |
| !! | TGGTTTTGCGGGTGGCTTCT+AGG | + | chr1_4:72122065-72122084 | None:intergenic | 55.0% |
| AGAGACCAGATGCTAGCTGC+TGG | - | chr1_4:72123415-72123434 | Msa0183260:CDS | 55.0% | |
| GTCAGAGACCTATGGTCCCT+TGG | - | chr1_4:72123441-72123460 | Msa0183260:CDS | 55.0% | |
| TCCATAGCAAGCAAGCAGGC+TGG | - | chr1_4:72123655-72123674 | Msa0183260:CDS | 55.0% | |
| CCATAGCAAGCAAGCAGGCT+GGG | - | chr1_4:72123656-72123675 | Msa0183260:CDS | 55.0% | |
| CAAGCAAGCAGGCTGGGAAT+TGG | - | chr1_4:72123662-72123681 | Msa0183260:CDS | 55.0% | |
| GGGTTACCTTCCGGCGAAGA+AGG | - | chr1_4:72119255-72119274 | Msa0183260:three_prime_UTR | 60.0% | |
| TGGAAATTGGCGGCGGCGTT+GGG | + | chr1_4:72119363-72119382 | None:intergenic | 60.0% | |
| TTGGAAATTGGCGGCGGCGT+TGG | + | chr1_4:72119364-72119383 | None:intergenic | 60.0% | |
| TGATTCTGCGGCGAGAGGGA+GGG | - | chr1_4:72119551-72119570 | Msa0183260:three_prime_UTR | 60.0% | |
| GAGGGAGGGAAGAGGAGGAT+AGG | - | chr1_4:72119565-72119584 | Msa0183260:three_prime_UTR | 60.0% | |
| !! | TCTTCTGATGGTGGTGGCGG+TGG | - | chr1_4:72119684-72119703 | Msa0183260:intron | 60.0% |
| ACCCTCGCCCAAGAATCCAC+AGG | + | chr1_4:72120841-72120860 | None:intergenic | 60.0% | |
| GAAGCAAGCGGGAGTGGGAT+GGG | + | chr1_4:72120978-72120997 | None:intergenic | 60.0% | |
| AAGGGGAAGCAAGCGGGAGT+GGG | + | chr1_4:72120983-72121002 | None:intergenic | 60.0% | |
| AAAGGGGAAGCAAGCGGGAG+TGG | + | chr1_4:72120984-72121003 | None:intergenic | 60.0% | |
| ! | GAGAAGGGAGGTTCTGGTGG+TGG | - | chr1_4:72121376-72121395 | Msa0183260:intron | 60.0% |
| ! | GGTGGTGGTGAACGGTTTGG+GGG | - | chr1_4:72121391-72121410 | Msa0183260:intron | 60.0% |
| GAGAGATGGGGCTAGGGACA+AGG | - | chr1_4:72121461-72121480 | Msa0183260:CDS | 60.0% | |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | + | chr1_4:72121560-72121579 | None:intergenic | 60.0% |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | + | chr1_4:72121563-72121582 | None:intergenic | 60.0% |
| CCCCAAAAATTGACGCGGCG+CGG | - | chr1_4:72121560-72121579 | Msa0183260:CDS | 60.0% | |
| AATTGACGCGGCGCGGTAAG+CGG | - | chr1_4:72121567-72121586 | Msa0183260:CDS | 60.0% | |
| ! | GCGGGCGCTTTTACATGACG+CGG | - | chr1_4:72121597-72121616 | Msa0183260:intron | 60.0% |
| GGTCAACGCGGGCAAAAAGC+GGG | + | chr1_4:72121876-72121895 | None:intergenic | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | + | chr1_4:72121877-72121896 | None:intergenic | 60.0% | |
| GGCAAAAAGCGGGTCAACGC+GGG | + | chr1_4:72121887-72121906 | None:intergenic | 60.0% | |
| GGGCAAAAAGCGGGTCAACG+CGG | + | chr1_4:72121888-72121907 | None:intergenic | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | + | chr1_4:72121876-72121895 | None:intergenic | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | + | chr1_4:72121877-72121896 | None:intergenic | 60.0% | |
| AGTCGCGCGTTAGGCAAACG+CGG | + | chr1_4:72121951-72121970 | None:intergenic | 60.0% | |
| CGTTTGCCTAACGCGCGACT+CGG | - | chr1_4:72121951-72121970 | Msa0183260:intron | 60.0% | |
| AATAGCGGTCTAACGCGGCG+CGG | + | chr1_4:72122012-72122031 | None:intergenic | 60.0% | |
| ! | CCCAGCCTGCTTGCTTGCTA+TGG | + | chr1_4:72123659-72123678 | None:intergenic | 60.0% |
| ! | CGTCGGGGCGTTTGTCAGGA+TGG | + | chr1_4:72119338-72119357 | None:intergenic | 65.0% |
| GGAAATTGGCGGCGGCGTTG+GGG | + | chr1_4:72119362-72119381 | None:intergenic | 65.0% | |
| CGCCGTGAATCTCAGCGCGA+TGG | - | chr1_4:72119471-72119490 | Msa0183260:three_prime_UTR | 65.0% | |
| TCGCCTGATTCTGCGGCGAG+AGG | - | chr1_4:72119546-72119565 | Msa0183260:three_prime_UTR | 65.0% | |
| CGCCTGATTCTGCGGCGAGA+GGG | - | chr1_4:72119547-72119566 | Msa0183260:three_prime_UTR | 65.0% | |
| CTCCCTCTCGCCGCAGAATC+AGG | + | chr1_4:72119552-72119571 | None:intergenic | 65.0% | |
| CTGATTCTGCGGCGAGAGGG+AGG | - | chr1_4:72119550-72119569 | Msa0183260:three_prime_UTR | 65.0% | |
| GGAAGCAAGCGGGAGTGGGA+TGG | + | chr1_4:72120979-72120998 | None:intergenic | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | - | chr1_4:72121529-72121548 | Msa0183260:CDS | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | - | chr1_4:72121568-72121587 | Msa0183260:CDS | 65.0% | |
| ! | GGGTCGTCGGGGCGTTTGTC+AGG | + | chr1_4:72119342-72119361 | None:intergenic | 70.0% |
| TGCGGCGAGAGGGAGGGAAG+AGG | - | chr1_4:72119557-72119576 | Msa0183260:three_prime_UTR | 70.0% | |
| GGCGAGAGGGAGGGAAGAGG+AGG | - | chr1_4:72119560-72119579 | Msa0183260:three_prime_UTR | 70.0% | |
| GCAAGCGGGAGTGGGATGGG+AGG | + | chr1_4:72120975-72120994 | None:intergenic | 70.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | + | chr1_4:72121960-72121979 | None:intergenic | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | - | chr1_4:72121971-72121990 | Msa0183260:intron | 70.0% | |
| CGGTCTAACGCGGCGCGGAG+CGG | + | chr1_4:72122007-72122026 | None:intergenic | 75.0% | |
| !! | CGGCGGCGTTGGGGTCGTCG+GGG | + | chr1_4:72119353-72119372 | None:intergenic | 80.0% |
| !! | GCGGCGGCGTTGGGGTCGTC+GGG | + | chr1_4:72119354-72119373 | None:intergenic | 80.0% |
| !! | GGCGGCGGCGTTGGGGTCGT+CGG | + | chr1_4:72119355-72119374 | None:intergenic | 80.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | - | chr1_4:72121534-72121553 | Msa0183260:CDS | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | - | chr1_4:72121578-72121597 | Msa0183260:intron | 80.0% |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | - | chr1_4:72121579-72121598 | Msa0183260:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 72119118 | 72123858 | 72119118 | ID=Msa0183260;Name=Msa0183260 |
| chr1_4 | mRNA | 72119118 | 72123858 | 72119118 | ID=Msa0183260-mRNA-1;Parent=Msa0183260;Name=Msa0183260-mRNA-1;_AED=0.10;_eAED=0.10;_QI=104|0.5|0.8|1|1|1|5|488|406 |
| chr1_4 | exon | 72119118 | 72119699 | 72119118 | ID=Msa0183260-mRNA-1:exon:24332;Parent=Msa0183260-mRNA-1 |
| chr1_4 | exon | 72120153 | 72120239 | 72120153 | ID=Msa0183260-mRNA-1:exon:24331;Parent=Msa0183260-mRNA-1 |
| chr1_4 | exon | 72121395 | 72121594 | 72121395 | ID=Msa0183260-mRNA-1:exon:24330;Parent=Msa0183260-mRNA-1 |
| chr1_4 | exon | 72122635 | 72122817 | 72122635 | ID=Msa0183260-mRNA-1:exon:24329;Parent=Msa0183260-mRNA-1 |
| chr1_4 | exon | 72123098 | 72123858 | 72123098 | ID=Msa0183260-mRNA-1:exon:24328;Parent=Msa0183260-mRNA-1 |
| chr1_4 | five_prime_UTR | 72123755 | 72123858 | 72123755 | ID=Msa0183260-mRNA-1:five_prime_utr;Parent=Msa0183260-mRNA-1 |
| chr1_4 | CDS | 72123098 | 72123754 | 72123098 | ID=Msa0183260-mRNA-1:cds;Parent=Msa0183260-mRNA-1 |
| chr1_4 | CDS | 72122635 | 72122817 | 72122635 | ID=Msa0183260-mRNA-1:cds;Parent=Msa0183260-mRNA-1 |
| chr1_4 | CDS | 72121395 | 72121594 | 72121395 | ID=Msa0183260-mRNA-1:cds;Parent=Msa0183260-mRNA-1 |
| chr1_4 | CDS | 72120153 | 72120239 | 72120153 | ID=Msa0183260-mRNA-1:cds;Parent=Msa0183260-mRNA-1 |
| chr1_4 | CDS | 72119606 | 72119699 | 72119606 | ID=Msa0183260-mRNA-1:cds;Parent=Msa0183260-mRNA-1 |
| chr1_4 | three_prime_UTR | 72119118 | 72119605 | 72119118 | ID=Msa0183260-mRNA-1:three_prime_utr;Parent=Msa0183260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
