AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0184980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184980 MtrunA17_Chr3g0101811 84.432 546 55 4 1 540 1 522 0.0 941
Msa0184980 MtrunA17_Chr3g0101731 75.138 543 94 3 1 539 1 506 0.0 835
Msa0184980 MtrunA17_Chr3g0101831 76.611 543 87 3 1 539 1 507 0.0 821
Msa0184980 MtrunA17_Chr3g0101721 71.295 533 112 3 12 539 12 508 0.0 789
Msa0184980 MtrunA17_Chr3g0101761 70.849 542 115 3 1 537 1 504 0.0 780
Msa0184980 MtrunA17_Chr3g0101801 68.073 545 131 3 1 540 8 514 0.0 754
Msa0184980 MtrunA17_Chr3g0101821 68.819 542 126 3 1 537 1 504 0.0 753
Msa0184980 MtrunA17_Chr8g0357431 69.871 541 123 2 1 537 1 505 0.0 753
Msa0184980 MtrunA17_Chr3g0101751 67.339 545 135 3 1 540 8 514 0.0 749
Msa0184980 MtrunA17_Chr8g0357421 68.333 540 132 2 1 537 1 504 0.0 730
Msa0184980 MtrunA17_Chr3g0101741 67.091 471 108 4 73 539 1 428 0.0 651
Msa0184980 MtrunA17_Chr1g0162801 60.487 534 166 5 11 538 11 505 0.0 632
Msa0184980 MtrunA17_Chr1g0162811 57.993 538 182 6 5 538 5 502 0.0 626
Msa0184980 MtrunA17_Chr3g0101711 54.880 543 203 3 1 537 1 507 0.0 618
Msa0184980 MtrunA17_Chr3g0101671 54.945 546 203 4 1 539 1 510 0.0 607
Msa0184980 MtrunA17_Chr3g0101661 55.638 541 196 5 1 534 1 504 0.0 607
Msa0184980 MtrunA17_Chr4g0020041 55.075 532 195 5 6 531 6 499 0.0 606
Msa0184980 MtrunA17_Chr1g0167321 59.065 535 174 5 11 539 8 503 0.0 603
Msa0184980 MtrunA17_Chr3g0101701 55.453 541 198 4 1 534 1 505 0.0 602
Msa0184980 MtrunA17_Chr3g0101691 53.050 541 211 4 1 534 1 505 0.0 599
Msa0184980 MtrunA17_Chr3g0101631 53.137 542 204 5 1 536 1 498 0.0 594
Msa0184980 MtrunA17_Chr3g0101651 53.558 534 205 4 11 537 11 508 0.0 592
Msa0184980 MtrunA17_Chr3g0101601 53.407 543 202 6 1 536 1 499 0.0 592
Msa0184980 MtrunA17_Chr3g0101621 53.333 540 201 6 1 536 1 493 0.0 579
Msa0184980 MtrunA17_Chr8g0361471 51.832 546 218 4 1 540 1 507 0.0 558
Msa0184980 MtrunA17_Chr6g0466331 51.756 541 216 4 1 535 1 502 0.0 556
Msa0184980 MtrunA17_Chr6g0465511 51.756 541 216 4 1 535 1 502 0.0 553
Msa0184980 MtrunA17_Chr3g0101611 51.351 518 210 3 26 538 27 507 0.0 537
Msa0184980 MtrunA17_Chr3g0101571 48.876 534 231 4 6 536 7 501 0.0 526
Msa0184980 MtrunA17_Chr3g0101581 47.103 535 239 5 6 535 8 503 0.0 522
Msa0184980 MtrunA17_Chr5g0431641 48.679 530 228 5 9 536 15 502 1.53e-179 514
Msa0184980 MtrunA17_Chr5g0446161 47.486 537 236 5 6 536 6 502 9.52e-179 513
Msa0184980 MtrunA17_Chr5g0445531 49.412 510 220 3 28 536 29 501 5.35e-177 508
Msa0184980 MtrunA17_Chr5g0403351 46.916 535 240 3 8 534 5 503 7.79e-177 508
Msa0184980 MtrunA17_Chr5g0445451 48.491 530 229 5 4 531 10 497 1.19e-174 502
Msa0184980 MtrunA17_Chr5g0445381 48.752 521 228 4 13 531 45 528 1.15e-173 501
Msa0184980 MtrunA17_Chr6g0463801 48.062 516 231 2 24 539 24 502 7.12e-173 498
Msa0184980 MtrunA17_Chr5g0445441 48.113 530 231 5 4 531 51 538 2.41e-172 498
Msa0184980 MtrunA17_Chr5g0431671 47.140 507 228 4 33 536 34 503 1.75e-171 494
Msa0184980 MtrunA17_Chr2g0280261 49.516 517 224 2 23 539 20 499 5.46e-171 493
Msa0184980 MtrunA17_Chr4g0076161 46.516 531 230 8 13 531 12 500 1.53e-169 489
Msa0184980 MtrunA17_Chr5g0445461 47.664 535 236 5 4 536 10 502 2.03e-169 489
Msa0184980 MtrunA17_Chr4g0024771 46.604 530 239 5 9 536 15 502 5.96e-169 488
Msa0184980 MtrunA17_Chr5g0445421 47.358 530 214 6 4 531 84 550 8.72e-169 489
Msa0184980 MtrunA17_Chr5g0403321 46.833 521 230 5 25 534 22 506 1.53e-167 484
Msa0184980 MtrunA17_Chr5g0446151 46.257 521 233 6 23 536 23 503 1.63e-167 484
Msa0184980 MtrunA17_Chr6g0463791 46.355 535 231 9 9 534 12 499 3.55e-164 476
Msa0184980 MtrunA17_Chr5g0403331 45.472 508 233 4 35 534 33 504 7.61e-161 467
Msa0184980 MtrunA17_Chr3g0116681 40.525 533 269 6 10 535 15 506 4.64e-139 412
Msa0184980 MtrunA17_Chr4g0047661 38.776 539 281 6 5 534 19 517 1.52e-127 382
Msa0184980 MtrunA17_Chr3g0116741 36.414 541 290 7 2 535 24 517 1.28e-122 370
Msa0184980 MtrunA17_Chr2g0310391 37.525 501 269 5 37 531 28 490 1.20e-121 367
Msa0184980 MtrunA17_Chr4g0058231 37.361 538 278 7 4 528 1 492 6.83e-120 362
Msa0184980 MtrunA17_Chr1g0156101 37.240 529 267 7 27 531 22 509 4.31e-119 360
Msa0184980 MtrunA17_Chr4g0047631 37.573 511 277 6 28 534 40 512 8.47e-119 360
Msa0184980 MtrunA17_Chr4g0047691 38.966 503 265 5 36 534 51 515 2.60e-118 359
Msa0184980 MtrunA17_Chr4g0058191 36.381 536 288 7 4 534 1 488 6.80e-118 357
Msa0184980 MtrunA17_Chr2g0310381 37.525 501 269 5 37 531 28 490 9.65e-118 357
Msa0184980 MtrunA17_Chr4g0058261 38.224 518 268 8 30 534 55 533 2.13e-117 357
Msa0184980 MtrunA17_Chr5g0430031 36.229 541 286 8 1 531 10 501 4.56e-117 355
Msa0184980 MtrunA17_Chr6g0472311 37.477 539 281 8 9 528 10 511 1.91e-115 351
Msa0184980 MtrunA17_Chr4g0058201 37.030 505 276 5 31 530 22 489 2.43e-115 350
Msa0184980 MtrunA17_Chr4g0058281 38.015 534 279 11 11 534 23 514 3.95e-115 350
Msa0184980 MtrunA17_Chr4g0047641 37.192 527 288 6 14 534 27 516 6.22e-115 350
Msa0184980 MtrunA17_Chr4g0011961 37.640 534 283 6 3 530 2 491 7.23e-114 347
Msa0184980 MtrunA17_Chr5g0430131 37.222 540 283 9 2 531 7 500 1.29e-111 341
Msa0184980 MtrunA17_Chr5g0405001 35.968 506 272 8 38 531 45 510 1.85e-111 341
Msa0184980 MtrunA17_Chr1g0156081 37.636 550 277 8 5 531 27 533 1.25e-110 340
Msa0184980 MtrunA17_Chr4g0035921 37.670 515 258 10 38 531 38 510 2.13e-110 338
Msa0184980 MtrunA17_Chr5g0430081 36.111 540 290 8 2 531 5 499 2.45e-110 338
Msa0184980 MtrunA17_Chr6g0484841 38.264 507 257 12 38 531 38 501 4.52e-110 337
Msa0184980 MtrunA17_Chr5g0419691 36.747 498 273 3 38 529 30 491 6.66e-110 337
Msa0184980 MtrunA17_Chr4g0011921 36.673 529 291 4 8 530 2 492 7.66e-110 336
Msa0184980 MtrunA17_Chr5g0431591 46.418 349 148 3 185 531 4 315 9.73e-110 330
Msa0184980 MtrunA17_Chr8g0382901 36.673 499 273 5 37 531 492 951 9.96e-110 349
Msa0184980 MtrunA17_Chr8g0382901 36.620 497 261 6 37 531 28 472 4.97e-107 342
Msa0184980 MtrunA17_Chr5g0430101 36.481 540 282 10 4 531 8 498 3.32e-109 335
Msa0184980 MtrunA17_Chr5g0430091 36.313 537 283 9 7 531 12 501 1.65e-107 331
Msa0184980 MtrunA17_Chr4g0011981 36.473 499 275 3 38 530 30 492 1.75e-107 330
Msa0184980 MtrunA17_Chr4g0011871 36.473 499 274 3 38 529 30 492 2.43e-107 330
Msa0184980 MtrunA17_Chr5g0431511 34.861 502 283 5 37 530 33 498 7.52e-107 329
Msa0184980 MtrunA17_Chr8g0390881 33.886 543 303 10 1 531 3 501 6.80e-106 327
Msa0184980 MtrunA17_Chr8g0344151 35.130 501 274 6 35 524 34 494 8.29e-106 326
Msa0184980 MtrunA17_Chr4g0011901 35.953 509 284 3 28 530 20 492 1.06e-105 325
Msa0184980 MtrunA17_Chr8g0344181 35.130 501 274 6 35 524 36 496 2.24e-105 325
Msa0184980 MtrunA17_Chr5g0431501 35.857 502 278 5 37 530 33 498 4.15e-104 322
Msa0184980 MtrunA17_Chr5g0431461 35.857 502 278 5 37 530 33 498 4.15e-104 322
Msa0184980 MtrunA17_Chr7g0218611 34.902 510 286 6 28 530 26 496 1.17e-103 320
Msa0184980 MtrunA17_Chr6g0484811 35.108 507 274 9 38 531 38 502 2.43e-103 320
Msa0184980 MtrunA17_Chr3g0086691 34.799 546 289 11 12 538 8 505 3.48e-103 320
Msa0184980 MtrunA17_Chr5g0406651 37.800 500 269 3 37 530 30 493 5.53e-103 318
Msa0184980 MtrunA17_Chr7g0218601 35.630 508 281 10 30 530 27 495 6.77e-102 316
Msa0184980 MtrunA17_Chr8g0372251 35.897 507 272 9 38 531 36 502 8.03e-102 316
Msa0184980 MtrunA17_Chr3g0086661 34.727 550 299 9 4 538 1 505 1.26e-101 316
Msa0184980 MtrunA17_Chr4g0061381 34.381 509 272 8 46 538 40 502 2.73e-100 312
Msa0184980 MtrunA17_Chr3g0086651 34.364 550 301 9 4 538 1 505 3.38e-100 312
Msa0184980 MtrunA17_Chr1g0205361 34.709 533 301 10 7 532 3 495 9.62e-100 310
Msa0184980 MtrunA17_Chr4g0011881 37.000 500 270 5 38 530 31 492 1.90e-99 309
Msa0184980 MtrunA17_Chr3g0094231 34.861 502 271 11 33 523 32 488 1.90e-98 307
Msa0184980 MtrunA17_Chr3g0094171 34.400 500 274 10 37 524 40 497 2.43e-98 307
Msa0184980 MtrunA17_Chr1g0156061 36.576 514 226 6 27 532 45 466 4.83e-98 305
Msa0184980 MtrunA17_Chr1g0160851 34.264 537 296 10 3 532 9 495 1.34e-97 305
Msa0184980 MtrunA17_Chr7g0258221 33.761 545 300 10 4 531 1 501 7.19e-97 303
Msa0184980 MtrunA17_Chr5g0446101 41.477 352 166 4 184 535 3 314 8.45e-96 294
Msa0184980 MtrunA17_Chr8g0344191 32.008 528 307 7 7 524 43 528 1.57e-95 301
Msa0184980 MtrunA17_Chr1g0174451 31.993 547 311 10 1 531 1 502 3.35e-95 299
Msa0184980 MtrunA17_Chr3g0101591 60.680 206 81 0 330 535 34 239 3.37e-93 284
Msa0184980 MtrunA17_Chr1g0174471 32.364 550 305 13 1 531 16 517 6.82e-93 293
Msa0184980 MtrunA17_Chr5g0395321 31.073 531 316 9 7 531 9 495 1.29e-92 293
Msa0184980 MtrunA17_Chr3g0084921 33.455 547 298 11 4 531 8 507 4.45e-92 291
Msa0184980 MtrunA17_Chr4g0057001 34.902 510 282 10 30 531 43 510 1.62e-91 290
Msa0184980 MtrunA17_Chr7g0235551 33.877 552 295 14 4 538 8 506 1.71e-91 289
Msa0184980 MtrunA17_Chr7g0265611 32.819 518 298 8 26 531 35 514 3.41e-91 289
Msa0184980 MtrunA17_Chr1g0174481 31.157 536 313 11 7 531 6 496 5.72e-91 288
Msa0184980 MtrunA17_Chr7g0246221 31.895 533 304 10 4 523 6 492 4.67e-90 285
Msa0184980 MtrunA17_Chr8g0362701 33.151 549 301 13 1 531 1 501 9.79e-90 285
Msa0184980 MtrunA17_Chr1g0174461 30.109 548 319 12 1 531 1 501 3.44e-89 283
Msa0184980 MtrunA17_Chr5g0401681 32.793 555 295 14 3 539 1 495 2.01e-88 281
Msa0184980 MtrunA17_Chr5g0395331 30.604 513 305 9 30 531 30 502 3.20e-88 281
Msa0184980 MtrunA17_Chr5g0445751 44.728 313 162 3 7 315 11 316 2.12e-87 272
Msa0184980 MtrunA17_Chr5g0430111 35.590 458 240 8 7 454 12 424 2.31e-86 273
Msa0184980 MtrunA17_Chr1g0174441 29.803 557 327 14 1 538 20 531 2.66e-86 276
Msa0184980 MtrunA17_Chr7g0255531 29.811 530 309 8 4 519 1 481 1.25e-85 274
Msa0184980 MtrunA17_Chr7g0258211 33.714 525 284 11 10 515 11 490 7.71e-85 272
Msa0184980 MtrunA17_Chr5g0395381 30.435 529 295 10 8 531 10 470 1.28e-84 270
Msa0184980 MtrunA17_Chr1g0200961 32.495 517 292 10 36 540 27 498 1.65e-84 271
Msa0184980 MtrunA17_Chr1g0176831 31.373 510 297 10 2 505 36 498 2.29e-84 271
Msa0184980 MtrunA17_Chr1g0205371 34.524 504 284 9 34 531 32 495 2.77e-84 270
Msa0184980 MtrunA17_Chr1g0164211 31.548 504 293 10 37 531 31 491 3.97e-84 270
Msa0184980 MtrunA17_Chr8g0356001 31.481 540 318 10 2 532 8 504 5.05e-84 270
Msa0184980 MtrunA17_Chr4g0056951 33.198 491 276 7 52 531 56 505 5.70e-84 270
Msa0184980 MtrunA17_Chr8g0362481 33.124 477 256 11 73 531 1 432 1.44e-83 266
Msa0184980 MtrunA17_Chr1g0213671 32.234 546 299 11 14 538 16 511 4.60e-83 268
Msa0184980 MtrunA17_Chr7g0246121 32.331 532 296 10 8 523 6 489 6.39e-83 267
Msa0184980 MtrunA17_Chr4g0053621 33.395 539 276 13 8 521 1 481 1.30e-82 266
Msa0184980 MtrunA17_Chr5g0401691 31.309 527 292 12 4 519 25 492 1.62e-81 263
Msa0184980 MtrunA17_Chr2g0314721 32.712 483 270 9 34 505 41 479 2.32e-81 263
Msa0184980 MtrunA17_Chr4g0039901 31.992 497 293 8 33 523 31 488 5.10e-80 259
Msa0184980 MtrunA17_Chr4g0052861 31.471 537 293 14 1 523 4 479 1.00e-79 258
Msa0184980 MtrunA17_Chr2g0314731 30.874 515 295 12 1 505 5 468 1.12e-79 258
Msa0184980 MtrunA17_Chr6g0451751 31.311 511 285 10 45 530 49 518 2.51e-79 258
Msa0184980 MtrunA17_Chr7g0254641 31.485 505 288 11 36 521 36 501 6.04e-79 257
Msa0184980 MtrunA17_Chr8g0355961 31.589 535 314 9 6 531 12 503 4.06e-78 254
Msa0184980 MtrunA17_Chr6g0463621 55.882 204 85 3 335 534 1 203 1.69e-77 243
Msa0184980 MtrunA17_Chr7g0246131 33.142 522 311 12 4 522 6 492 6.70e-77 251
Msa0184980 MtrunA17_Chr7g0246151 31.402 535 311 10 4 527 6 495 2.92e-76 249
Msa0184980 MtrunA17_Chr4g0052851 30.986 497 285 10 36 527 32 475 6.13e-76 248
Msa0184980 MtrunA17_Chr1g0207841 29.191 507 297 9 48 531 49 516 1.61e-75 248
Msa0184980 MtrunA17_Chr8g0351801 30.350 514 293 10 47 534 44 518 2.45e-75 248
Msa0184980 MtrunA17_Chr6g0451781 31.061 528 297 10 30 530 64 551 3.14e-75 248
Msa0184980 MtrunA17_Chr7g0224551 28.136 558 321 15 1 531 1 505 3.21e-75 247
Msa0184980 MtrunA17_Chr6g0451691 30.350 514 290 10 45 530 49 522 4.12e-75 247
Msa0184980 MtrunA17_Chr4g0030701 29.537 518 302 11 38 531 36 514 4.54e-75 247
Msa0184980 MtrunA17_Chr4g0046321 28.868 530 308 14 30 533 25 511 9.07e-75 246
Msa0184980 MtrunA17_Chr6g0463611 40.956 293 166 5 13 302 26 314 1.80e-74 239
Msa0184980 MtrunA17_Chr7g0224561 28.444 559 318 15 1 531 1 505 9.73e-74 243
Msa0184980 MtrunA17_Chr4g0052881 31.752 548 299 13 8 540 7 494 1.09e-73 242
Msa0184980 MtrunA17_Chr6g0451741 29.825 513 293 9 45 530 68 540 1.61e-72 241
Msa0184980 MtrunA17_Chr4g0030711 29.104 536 312 11 23 531 23 517 1.98e-72 240
Msa0184980 MtrunA17_Chr8g0339331 29.703 505 290 10 38 521 40 500 4.63e-72 239
Msa0184980 MtrunA17_Chr4g0046351 28.491 530 310 13 30 533 25 511 5.72e-72 238
Msa0184980 MtrunA17_Chr8g0339311 30.948 517 295 14 37 531 44 520 1.36e-71 238
Msa0184980 MtrunA17_Chr4g0046331 27.869 549 325 14 13 533 8 513 1.90e-71 237
Msa0184980 MtrunA17_Chr4g0008101 30.273 512 291 9 45 530 47 518 2.61e-71 237
Msa0184980 MtrunA17_Chr5g0445371 43.197 294 98 5 238 530 1 226 3.95e-71 228
Msa0184980 MtrunA17_Chr3g0082701 30.214 513 291 10 45 530 47 519 5.38e-71 236
Msa0184980 MtrunA17_Chr5g0445351 64.848 165 58 0 363 527 52 216 6.06e-71 226
Msa0184980 MtrunA17_Chr1g0197891 29.400 517 318 9 7 517 3 478 1.85e-70 234
Msa0184980 MtrunA17_Chr1g0197881 28.682 516 322 8 7 517 3 477 3.03e-70 233
Msa0184980 MtrunA17_Chr1g0197851 28.820 517 321 9 7 517 3 478 1.20e-69 231
Msa0184980 MtrunA17_Chr6g0458561 29.390 541 310 13 6 521 20 513 1.52e-69 232
Msa0184980 MtrunA17_Chr6g0451641 31.227 554 297 17 3 530 16 511 1.51e-68 229
Msa0184980 MtrunA17_Chr4g0039391 30.291 515 302 10 28 530 26 495 1.95e-68 229
Msa0184980 MtrunA17_Chr7g0246181 29.379 531 319 10 4 523 6 491 3.08e-68 228
Msa0184980 MtrunA17_Chr5g0445761 57.005 207 88 1 335 540 1 207 4.25e-68 218
Msa0184980 MtrunA17_Chr5g0430071 35.294 357 184 5 183 531 37 354 1.01e-67 223
Msa0184980 MtrunA17_Chr1g0197871 29.572 514 299 11 14 513 10 474 2.90e-67 225
Msa0184980 MtrunA17_Chr6g0466941 29.679 529 303 12 11 514 12 496 9.01e-67 225
Msa0184980 MtrunA17_Chr4g0011941 50.000 194 97 0 338 531 4 197 1.47e-66 214
Msa0184980 MtrunA17_Chr2g0296651 29.323 532 300 11 1 516 1 472 5.43e-66 222
Msa0184980 MtrunA17_Chr2g0304871 29.352 494 291 9 45 520 46 499 1.22e-65 222
Msa0184980 MtrunA17_Chr4g0017411 30.515 485 278 13 36 515 29 459 1.35e-65 221
Msa0184980 MtrunA17_Chr4g0011851 47.573 206 108 0 324 529 5 210 3.63e-65 211
Msa0184980 MtrunA17_Chr1g0160861 34.807 362 190 6 171 532 21 336 5.62e-65 214
Msa0184980 MtrunA17_Chr4g0058211 48.223 197 100 1 334 530 18 212 8.76e-65 210
Msa0184980 MtrunA17_Chr4g0046631 29.730 481 277 10 38 499 47 485 1.73e-64 219
Msa0184980 MtrunA17_Chr2g0310351 49.738 191 96 0 341 531 7 197 7.78e-64 207
Msa0184980 MtrunA17_Chr6g0466901 29.002 531 305 13 8 514 13 495 2.71e-62 213
Msa0184980 MtrunA17_Chr5g0445361 64.394 132 47 0 405 536 8 139 4.29e-59 192
Msa0184980 MtrunA17_Chr3g0101541 62.500 136 51 0 383 518 1 136 1.22e-58 191
Msa0184980 MtrunA17_Chr1g0210091 27.059 510 304 13 46 533 74 537 4.13e-57 199
Msa0184980 MtrunA17_Chr8g0390871 44.279 201 110 2 332 531 24 223 2.10e-56 189
Msa0184980 MtrunA17_Chr5g0432751 26.036 507 302 11 35 518 31 487 1.55e-55 194
Msa0184980 MtrunA17_Chr1g0200951 28.854 506 296 13 39 527 63 521 3.50e-55 194
Msa0184980 MtrunA17_Chr4g0076171 49.474 190 69 4 351 534 1 169 4.05e-54 180
Msa0184980 MtrunA17_Chr5g0419451 28.543 494 276 17 31 500 46 486 7.10e-53 187
Msa0184980 MtrunA17_Chr2g0296661 28.252 492 281 11 49 521 44 482 2.46e-51 183
Msa0184980 MtrunA17_Chr3g0107541 26.707 498 300 12 46 521 59 513 1.12e-50 182
Msa0184980 MtrunA17_Chr8g0377341 28.623 552 299 19 6 527 32 518 1.33e-49 179
Msa0184980 MtrunA17_Chr5g0445411 53.289 152 70 1 13 163 21 172 2.52e-49 168
Msa0184980 MtrunA17_Chr5g0423621 40.884 181 105 1 351 531 1 179 3.35e-48 165
Msa0184980 MtrunA17_Chr1g0174421 32.374 278 179 4 34 303 44 320 3.01e-47 167
Msa0184980 MtrunA17_Chr3g0107611 26.030 534 321 14 6 511 23 510 4.80e-47 172
Msa0184980 MtrunA17_Chr2g0314781 45.806 155 84 0 351 505 1 155 8.40e-47 161
Msa0184980 MtrunA17_Chr8g0346261 28.243 478 275 15 40 500 87 513 3.67e-46 169
Msa0184980 MtrunA17_Chr1g0174431 39.706 204 114 3 335 531 1 202 1.09e-45 159
Msa0184980 MtrunA17_Chr8g0370641 24.490 539 339 11 11 524 14 509 3.07e-45 167
Msa0184980 MtrunA17_Chr3g0086681 48.125 160 74 2 383 538 13 167 5.02e-45 156
Msa0184980 MtrunA17_Chr8g0370651 24.862 543 339 12 8 524 14 513 6.85e-45 166
Msa0184980 MtrunA17_Chr4g0074581 28.180 511 319 17 29 527 61 535 9.14e-45 166
Msa0184980 MtrunA17_Chr5g0431631 55.000 140 57 2 9 147 27 161 3.20e-44 154
Msa0184980 MtrunA17_Chr6g0451811 40.000 200 115 2 333 530 3 199 5.16e-44 155
Msa0184980 MtrunA17_Chr1g0198191 24.165 509 332 12 3 500 18 483 1.10e-43 162
Msa0184980 MtrunA17_Chr4g0046681 39.583 192 111 2 338 527 34 222 8.46e-43 152
Msa0184980 MtrunA17_Chr4g0011931 32.660 297 192 3 8 298 2 296 1.44e-42 154
Msa0184980 MtrunA17_Chr2g0280121 25.773 485 304 13 55 522 54 499 1.50e-42 159
Msa0184980 MtrunA17_Chr4g0011861 32.836 268 173 2 38 298 30 297 1.52e-42 154
Msa0184980 MtrunA17_Chr5g0430041 46.835 158 83 1 361 517 1 158 2.41e-42 149
Msa0184980 MtrunA17_Chr3g0117301 51.282 117 57 0 386 502 1 117 1.51e-41 145
Msa0184980 MtrunA17_Chr2g0280081 26.240 484 295 12 56 521 51 490 4.28e-41 159
Msa0184980 MtrunA17_Chr2g0280081 26.004 473 302 13 62 522 558 994 1.71e-40 157
Msa0184980 MtrunA17_Chr6g0451771 39.899 198 114 2 335 530 22 216 6.28e-41 147
Msa0184980 MtrunA17_Chr2g0280071 26.587 504 320 13 33 522 59 526 6.37e-41 157
Msa0184980 MtrunA17_Chr5g0430151 43.023 172 97 1 361 531 1 172 8.03e-41 145
Msa0184980 MtrunA17_Chr5g0413911 26.453 499 318 16 36 515 41 509 2.03e-40 153
Msa0184980 MtrunA17_Chr2g0280041 26.033 484 302 14 55 522 82 525 5.90e-40 152
Msa0184980 MtrunA17_Chr8g0387101 27.329 483 284 14 62 522 59 496 9.13e-40 151
Msa0184980 MtrunA17_Chr5g0430171 39.207 227 127 4 7 231 12 229 9.28e-40 144
Msa0184980 MtrunA17_Chr4g0028321 49.612 129 64 1 404 531 26 154 5.11e-39 140
Msa0184980 MtrunA17_Chr2g0334021 22.913 515 327 10 34 529 30 493 2.14e-38 147
Msa0184980 MtrunA17_Chr6g0451681 37.895 190 113 2 328 515 270 456 2.47e-38 147
Msa0184980 MtrunA17_Chr6g0451681 37.654 162 91 2 27 178 51 212 4.98e-23 102
Msa0184980 MtrunA17_Chr5g0409051 27.017 533 337 18 10 527 6 501 7.60e-38 145
Msa0184980 MtrunA17_Chr5g0402981 39.888 178 101 3 346 520 3 177 8.15e-38 138
Msa0184980 MtrunA17_Chr3g0116731 45.638 149 66 2 386 534 1 134 5.42e-37 133
Msa0184980 MtrunA17_Chr8g0364651 25.475 526 327 16 14 522 11 488 6.27e-37 143
Msa0184980 MtrunA17_Chr4g0046661 41.463 164 94 1 338 499 28 191 7.08e-34 128
Msa0184980 MtrunA17_Chr4g0046701 48.387 124 62 1 378 499 2 125 1.70e-33 125
Msa0184980 MtrunA17_Chr2g0310371 46.667 120 63 1 37 156 28 146 2.33e-31 118
Msa0184980 MtrunA17_Chr5g0445541 47.581 124 59 2 9 131 15 133 3.89e-31 117
Msa0184980 MtrunA17_Chr5g0444981 40.805 174 102 1 344 517 20 192 3.13e-30 117
Msa0184980 MtrunA17_Chr4g0046691 28.947 266 181 4 38 298 40 302 3.59e-30 120
Msa0184980 MtrunA17_Chr8g0364631 25.434 519 312 14 31 522 26 496 3.93e-30 123
Msa0184980 MtrunA17_Chr2g0280011 34.343 198 118 5 334 522 7 201 5.17e-29 114
Msa0184980 MtrunA17_Chr4g0076181 61.333 75 29 0 73 147 1 75 2.20e-28 110
Msa0184980 MtrunA17_Chr4g0076181 33.708 89 59 0 208 296 73 161 8.94e-12 63.5
Msa0184980 MtrunA17_Chr4g0030741 25.843 356 211 9 12 358 38 349 2.60e-28 115
Msa0184980 MtrunA17_Chr3g0117321 48.276 116 59 1 41 156 11 125 2.57e-27 106
Msa0184980 MtrunA17_Chr4g0046671 26.449 276 186 6 38 298 45 318 3.30e-27 112
Msa0184980 MtrunA17_Chr6g0477081 26.117 291 159 5 161 445 1 241 2.30e-26 107
Msa0184980 MtrunA17_Chr5g0431601 56.627 83 35 1 73 155 1 82 2.81e-26 102
Msa0184980 MtrunA17_Chr2g0280061 33.862 189 115 4 334 515 7 192 3.16e-26 106
Msa0184980 MtrunA17_Chr5g0402971 28.452 239 152 5 38 260 41 276 5.36e-26 108
Msa0184980 MtrunA17_Chr1g0207851 25.373 268 180 6 48 298 49 313 7.30e-26 108
Msa0184980 MtrunA17_Chr6g0451801 26.846 298 190 8 28 298 27 323 8.25e-26 108
Msa0184980 MtrunA17_Chr3g0105751 27.660 282 180 9 37 299 47 323 1.14e-24 106
Msa0184980 MtrunA17_Chr5g0430051 43.478 115 63 2 2 116 4 116 7.00e-24 96.7
Msa0184980 MtrunA17_Chr5g0445341 51.765 85 40 1 73 156 1 85 9.88e-24 95.1
Msa0184980 MtrunA17_Chr3g0107561 25.246 305 206 9 6 294 18 316 1.60e-23 101
Msa0184980 MtrunA17_Chr5g0396521 32.673 202 107 4 338 511 351 551 1.20e-22 101
Msa0184980 MtrunA17_Chr6g0484771 36.154 130 81 1 73 200 1 130 1.58e-22 94.0
Msa0184980 MtrunA17_Chr8g0381571 23.140 484 297 17 28 498 34 455 2.89e-22 100
Msa0184980 MtrunA17_Chr8g0381541 22.951 488 303 17 28 502 34 461 3.71e-22 99.8
Msa0184980 MtrunA17_Chr3g0107551 30.675 163 110 1 341 500 11 173 4.23e-22 94.7
Msa0184980 MtrunA17_Chr4g0030761 33.766 154 75 5 388 531 3 139 7.77e-22 92.0
Msa0184980 MtrunA17_Chr3g0105761 29.688 192 121 3 341 529 6 186 1.36e-21 93.2
Msa0184980 MtrunA17_Chr3g0116721 26.991 226 121 5 144 361 1 190 2.04e-21 92.4
Msa0184980 MtrunA17_Chr1g0179811 24.473 474 305 16 41 502 80 512 2.86e-20 94.4
Msa0184980 MtrunA17_Chr2g0313821 22.000 500 325 18 26 502 32 489 3.24e-20 94.0
Msa0184980 MtrunA17_Chr2g0293411 23.395 483 293 21 35 502 39 459 4.12e-20 93.6
Msa0184980 MtrunA17_Chr3g0101641 45.333 75 41 0 183 257 2 76 6.92e-20 84.3
Msa0184980 MtrunA17_Chr2g0293421 23.654 520 302 21 2 498 7 454 1.07e-19 92.0
Msa0184980 MtrunA17_Chr8g0354531 24.605 443 283 15 67 502 220 618 1.32e-19 92.4
Msa0184980 MtrunA17_Chr0c19g0493771 32.353 170 111 3 338 505 456 623 2.51e-19 91.7
Msa0184980 MtrunA17_Chr8g0354571 22.748 444 291 13 67 502 98 497 2.89e-19 90.9
Msa0184980 MtrunA17_Chr5g0445551 62.069 58 22 0 476 533 1 58 4.48e-19 81.3
Msa0184980 MtrunA17_Chr2g0313781 21.857 517 317 16 26 502 32 501 9.51e-19 89.4
Msa0184980 MtrunA17_Chr2g0288661 20.309 453 297 15 62 499 87 490 1.28e-18 89.0
Msa0184980 MtrunA17_Chr2g0313831 22.222 441 296 16 68 502 90 489 1.53e-18 89.0
Msa0184980 MtrunA17_Chr2g0313791 22.004 509 309 16 26 502 32 484 1.56e-18 88.6
Msa0184980 MtrunA17_Chr8g0351401 28.571 182 108 4 338 502 306 482 1.83e-17 85.5
Msa0184980 MtrunA17_Chr2g0307291 22.400 500 322 18 26 502 35 491 2.05e-17 85.1
Msa0184980 MtrunA17_Chr2g0307301 22.445 499 323 16 26 502 35 491 2.34e-17 85.1
Msa0184980 MtrunA17_Chr8g0354511 23.077 455 286 15 62 502 93 497 2.94e-17 84.7
Msa0184980 MtrunA17_Chr8g0372591 30.370 135 93 1 333 467 1 134 4.67e-17 78.2
Msa0184980 MtrunA17_Chr7g0235261 22.371 447 295 14 58 498 79 479 1.07e-16 83.2
Msa0184980 MtrunA17_Chr8g0351391 24.217 479 298 16 45 502 49 483 1.28e-16 82.8
Msa0184980 MtrunA17_Chr4g0004601 22.838 451 288 16 58 498 100 500 1.66e-16 82.4
Msa0184980 MtrunA17_Chr8g0351421 28.108 185 117 4 338 508 306 488 1.92e-16 82.0
Msa0184980 MtrunA17_Chr2g0313751 20.490 449 291 13 69 502 119 516 2.34e-16 82.0
Msa0184980 MtrunA17_Chr8g0362731 30.178 169 115 3 335 502 215 381 2.38e-16 81.3
Msa0184980 MtrunA17_Chr8g0336361 21.212 495 303 14 51 502 81 531 2.57e-16 82.0
Msa0184980 MtrunA17_Chr8g0351441 27.568 185 118 4 338 508 305 487 3.31e-16 81.6
Msa0184980 MtrunA17_Chr3g0135841 34.356 163 96 5 338 494 342 499 3.91e-16 81.3
Msa0184980 MtrunA17_Chr5g0400421 29.586 169 108 4 338 502 301 462 8.63e-16 80.1
Msa0184980 MtrunA17_Chr5g0445641 46.250 80 43 0 139 218 22 101 1.06e-15 73.6
Msa0184980 MtrunA17_Chr1g0204271 28.814 177 115 3 338 503 303 479 1.29e-15 79.7
Msa0184980 MtrunA17_Chr2g0313801 21.893 507 317 21 26 502 32 489 1.62e-15 79.3
Msa0184980 MtrunA17_Chr1g0176861 42.553 94 45 3 2 95 10 94 2.22e-15 72.0
Msa0184980 MtrunA17_Chr8g0364081 20.961 458 311 14 58 500 91 512 2.52e-15 79.0
Msa0184980 MtrunA17_Chr8g0351311 23.909 481 298 16 45 502 49 484 2.72e-15 78.6
Msa0184980 MtrunA17_Chr2g0313761 21.124 445 297 16 67 502 85 484 3.02e-15 78.6
Msa0184980 MtrunA17_Chr8g0339861 22.745 510 309 23 11 502 16 458 3.48e-15 78.2
Msa0184980 MtrunA17_Chr2g0314771 25.478 157 111 2 73 223 1 157 3.79e-15 73.2
Msa0184980 MtrunA17_Chr4g0014051 22.870 446 278 16 68 498 103 497 3.92e-15 78.2
Msa0184980 MtrunA17_Chr1g0151221 33.333 159 103 3 338 494 334 491 7.55e-15 77.4
Msa0184980 MtrunA17_Chr8g0351461 25.946 185 121 4 338 508 305 487 1.11e-14 76.6
Msa0184980 MtrunA17_Chr2g0328711 50.000 56 28 0 476 531 1 56 6.55e-14 66.6
Msa0184980 MtrunA17_Chr5g0445651 56.364 55 21 1 333 387 8 59 9.13e-14 66.2
Msa0184980 MtrunA17_Chr6g0472221 31.579 171 110 5 335 502 333 499 1.08e-13 73.6
Msa0184980 MtrunA17_Chr1g0203141 27.219 169 120 3 335 502 322 488 1.12e-13 73.6
Msa0184980 MtrunA17_Chr1g0203151 27.326 172 122 3 335 505 318 487 1.94e-13 72.8
Msa0184980 MtrunA17_Chr3g0107501 21.250 480 301 12 36 500 32 449 2.29e-13 72.4
Msa0184980 MtrunA17_Chr8g0372711 32.558 172 99 6 338 502 297 458 4.52e-13 71.6
Msa0184980 MtrunA17_Chr6g0455461 28.090 178 121 3 333 507 271 444 5.16e-13 71.2
Msa0184980 MtrunA17_Chr3g0078411 28.090 178 121 3 333 507 271 444 5.26e-13 71.2
Msa0184980 MtrunA17_Chr5g0446131 26.786 168 120 3 336 502 322 487 5.47e-13 71.2
Msa0184980 MtrunA17_Chr8g0372341 30.952 126 79 2 45 165 52 174 1.08e-12 67.4
Msa0184980 MtrunA17_Chr3g0128461 20.299 468 312 15 67 521 98 517 1.41e-12 70.1
Msa0184980 MtrunA17_Chr6g0451761 26.172 256 151 9 45 286 49 280 1.53e-12 68.2
Msa0184980 MtrunA17_Chr2g0280001 32.353 136 81 3 33 165 59 186 3.96e-12 65.9
Msa0184980 MtrunA17_Chr4g0063221 25.882 170 124 2 334 502 324 492 5.46e-12 68.2
Msa0184980 MtrunA17_Chr5g0446111 53.846 52 24 0 62 113 1 52 1.60e-11 59.3
Msa0184980 MtrunA17_Chr2g0308651 22.558 430 278 13 84 502 3 388 1.91e-11 66.2
Msa0184980 MtrunA17_Chr7g0248991 32.759 116 76 2 338 453 238 351 2.72e-11 65.5
Msa0184980 MtrunA17_Chr8g0381561 32.456 114 68 3 385 498 2 106 3.44e-11 60.8
Msa0184980 MtrunA17_Chr8g0372331 30.556 108 70 2 420 524 9 114 5.45e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184980 AT1G13110.1 37.660 547 286 11 1 535 1 504 5.20e-125 376
Msa0184980 AT3G26310.1 38.636 528 266 9 16 531 12 493 1.34e-124 375
Msa0184980 AT5G25120.1 39.024 533 270 8 7 531 5 490 3.94e-119 360
Msa0184980 AT3G26330.1 38.264 507 262 9 38 534 32 497 7.73e-119 360
Msa0184980 AT3G26300.1 37.009 535 279 10 10 531 5 494 2.18e-118 358
Msa0184980 AT3G26210.1 40.726 496 246 7 46 531 40 497 6.39e-118 357
Msa0184980 AT3G26320.1 37.187 519 269 10 29 534 23 497 2.46e-117 356
Msa0184980 AT5G25180.1 37.970 532 270 9 9 531 10 490 2.08e-116 353
Msa0184980 AT5G07990.1 35.401 548 295 10 3 538 1 501 1.10e-115 352
Msa0184980 AT5G25140.1 38.764 534 270 9 7 531 5 490 3.04e-115 350
Msa0184980 AT3G26270.1 38.314 522 267 12 26 535 23 501 4.04e-114 348
Msa0184980 AT3G26280.1 39.347 521 260 12 26 533 23 500 4.43e-114 348
Msa0184980 AT3G26280.2 39.347 521 260 12 26 533 40 517 5.01e-114 348
Msa0184980 AT5G57260.1 38.552 511 253 10 38 531 31 497 1.09e-113 347
Msa0184980 AT5G25130.1 36.920 539 283 9 1 531 1 490 1.85e-112 343
Msa0184980 AT3G26290.1 38.031 518 266 9 29 534 23 497 2.43e-110 338
Msa0184980 AT3G26290.2 38.031 518 266 9 29 534 36 510 3.43e-110 338
Msa0184980 AT5G24950.1 36.008 511 276 8 30 531 25 493 4.53e-110 337
Msa0184980 AT1G13080.1 36.245 538 279 11 12 531 7 498 1.44e-109 336
Msa0184980 AT3G26230.1 38.069 549 270 15 4 535 3 498 2.46e-108 333
Msa0184980 AT3G48310.1 34.870 499 279 5 26 523 25 478 2.48e-108 332
Msa0184980 AT2G24180.1 37.598 508 264 8 33 531 32 495 3.58e-108 332
Msa0184980 AT3G48280.1 34.476 525 295 8 1 524 2 478 5.11e-108 332
Msa0184980 AT3G48270.1 34.870 499 282 5 26 523 21 477 1.65e-107 330
Msa0184980 AT4G13310.1 36.204 511 278 6 29 531 24 494 2.05e-107 330
Msa0184980 AT1G13090.2 37.628 489 257 8 33 511 24 474 3.69e-107 330
Msa0184980 AT3G26180.1 36.245 538 291 15 6 531 1 498 1.42e-106 328
Msa0184980 AT3G26170.1 34.815 540 296 12 6 531 1 498 1.85e-105 325
Msa0184980 AT2G02580.1 38.632 541 274 11 5 534 4 497 1.66e-104 323
Msa0184980 AT3G48300.1 34.911 507 283 6 26 531 19 479 9.81e-104 320
Msa0184980 AT3G48300.2 34.911 507 283 6 26 531 21 481 1.04e-103 320
Msa0184980 AT3G48290.2 35.446 505 299 6 22 523 25 505 1.29e-103 321
Msa0184980 AT2G45560.1 35.675 541 286 12 8 531 9 504 3.38e-103 320
Msa0184980 AT2G30770.1 34.592 503 281 7 36 531 32 493 3.57e-103 319
Msa0184980 AT4G36220.1 34.585 506 271 9 45 531 48 512 3.58e-103 320
Msa0184980 AT2G45550.1 34.206 535 302 8 8 531 9 504 1.95e-102 318
Msa0184980 AT4G31500.1 34.766 512 278 7 34 531 26 495 6.67e-101 313
Msa0184980 AT2G45570.1 34.572 538 291 9 11 531 12 505 1.18e-99 311
Msa0184980 AT3G26220.1 37.454 542 284 13 8 535 1 501 1.45e-99 310
Msa0184980 AT3G48290.1 33.797 503 284 5 22 523 25 479 1.82e-99 310
Msa0184980 AT3G26160.1 35.478 544 292 13 1 531 1 498 2.81e-99 310
Msa0184980 AT4G13290.1 33.659 511 283 7 29 531 25 487 4.12e-99 309
Msa0184980 AT3G48320.1 34.118 510 290 5 15 523 14 478 1.20e-98 307
Msa0184980 AT3G26150.1 35.596 545 288 14 1 531 3 498 1.43e-98 308
Msa0184980 AT1G11610.1 33.792 509 289 7 30 531 26 493 5.10e-98 306
Msa0184980 AT5G24960.1 36.187 514 276 9 28 531 23 494 6.81e-98 306
Msa0184980 AT2G30750.1 34.834 511 285 7 28 531 24 493 3.90e-97 304
Msa0184980 AT4G13770.1 34.442 511 279 9 35 531 28 496 1.64e-96 302
Msa0184980 AT1G11610.2 33.466 502 286 7 30 524 26 486 1.39e-95 300
Msa0184980 AT1G33720.1 34.015 538 301 11 8 532 9 505 1.08e-93 295
Msa0184980 AT1G13100.1 36.523 512 261 12 26 521 19 482 6.34e-93 293
Msa0184980 AT5G06900.1 33.021 533 294 11 12 531 7 489 1.01e-92 293
Msa0184980 AT3G26830.1 34.747 495 273 9 33 516 24 479 1.12e-92 292
Msa0184980 AT3G44250.1 35.827 508 278 8 33 530 24 493 2.67e-92 291
Msa0184980 AT3G26200.1 35.922 515 279 10 29 531 20 495 3.91e-92 291
Msa0184980 AT3G26190.1 35.328 518 278 11 33 535 24 499 6.55e-92 290
Msa0184980 AT4G12320.1 32.890 526 306 11 15 531 20 507 8.58e-91 288
Msa0184980 AT3G61040.1 32.937 504 284 8 38 531 34 493 8.81e-91 287
Msa0184980 AT5G44620.1 33.131 495 281 7 46 531 55 508 1.08e-90 288
Msa0184980 AT5G04330.1 33.725 510 281 11 38 531 33 501 2.35e-89 284
Msa0184980 AT2G40890.1 32.665 499 279 6 35 519 25 480 2.70e-89 284
Msa0184980 AT4G12300.1 32.143 532 305 10 12 531 18 505 2.59e-88 281
Msa0184980 AT5G42590.1 33.952 539 303 11 1 531 1 494 3.38e-86 275
Msa0184980 AT3G53280.1 34.570 512 286 11 33 534 24 496 9.91e-85 271
Msa0184980 AT3G53300.1 34.394 503 287 9 37 531 28 495 1.95e-82 266
Msa0184980 AT2G42250.1 29.508 549 324 10 3 537 9 508 1.18e-81 264
Msa0184980 AT4G22710.1 31.984 494 287 7 46 531 62 514 1.67e-81 264
Msa0184980 AT2G45580.1 32.563 519 295 8 27 531 28 505 4.59e-81 263
Msa0184980 AT4G12310.1 31.124 498 290 9 46 531 53 509 4.90e-81 263
Msa0184980 AT4G22690.1 31.791 497 284 7 46 531 93 545 1.42e-80 263
Msa0184980 AT4G12330.1 31.776 535 306 10 12 531 17 507 2.01e-80 261
Msa0184980 AT5G35715.1 32.836 469 269 9 73 531 1 433 5.76e-78 252
Msa0184980 AT4G37320.1 31.559 526 287 15 11 521 8 475 1.28e-77 253
Msa0184980 AT4G37430.1 30.490 551 306 16 11 540 1 495 2.75e-76 249
Msa0184980 AT5G67310.1 30.171 527 300 17 5 521 18 486 3.79e-75 247
Msa0184980 AT1G01280.1 32.448 527 295 12 4 511 1 485 3.59e-74 244
Msa0184980 AT3G52970.1 29.865 519 304 10 37 535 36 514 9.16e-74 243
Msa0184980 AT4G13310.2 34.644 407 219 5 29 428 24 390 1.17e-73 239
Msa0184980 AT4G15360.1 28.571 546 333 10 1 532 1 503 2.63e-73 243
Msa0184980 AT4G37410.1 33.267 499 273 14 35 522 28 477 7.85e-73 241
Msa0184980 AT1G13080.2 33.501 397 202 9 153 531 28 380 1.39e-72 236
Msa0184980 AT4G15330.1 28.600 500 305 7 28 518 29 485 1.62e-72 240
Msa0184980 AT1G33730.1 34.634 410 200 11 139 528 4 365 5.75e-72 234
Msa0184980 AT1G33730.2 34.634 410 200 11 139 528 4 365 5.75e-72 234
Msa0184980 AT4G37330.1 30.682 528 294 11 5 521 6 472 1.16e-71 237
Msa0184980 AT3G52970.2 29.081 533 304 10 37 535 36 528 1.42e-71 238
Msa0184980 AT2G25160.1 30.812 542 307 16 1 519 1 497 1.38e-70 235
Msa0184980 AT3G20090.2 29.668 482 285 8 48 518 54 492 1.58e-70 235
Msa0184980 AT4G37340.1 29.602 527 295 15 9 518 5 472 1.82e-70 234
Msa0184980 AT5G06905.1 30.309 518 296 12 9 504 7 481 2.44e-70 234
Msa0184980 AT5G10610.1 28.571 532 324 9 8 531 4 487 7.59e-70 233
Msa0184980 AT5G57220.1 30.426 516 292 11 35 540 28 486 8.26e-70 232
Msa0184980 AT1G74550.1 28.598 542 309 13 1 530 1 476 1.48e-69 231
Msa0184980 AT3G32047.1 29.039 489 295 8 48 525 53 500 1.71e-69 232
Msa0184980 AT4G37400.1 31.365 491 274 13 46 524 40 479 1.80e-69 232
Msa0184980 AT3G20940.1 28.144 501 307 7 26 515 31 489 6.79e-69 231
Msa0184980 AT5G10600.1 29.515 515 301 13 37 540 46 509 1.35e-68 230
Msa0184980 AT3G20110.1 29.222 527 318 8 3 519 1 482 1.67e-68 229
Msa0184980 AT1G33720.4 33.820 411 222 8 133 532 2 373 2.01e-68 225
Msa0184980 AT1G33720.3 33.820 411 222 8 133 532 2 373 2.01e-68 225
Msa0184980 AT1G33720.5 33.820 411 222 8 133 532 2 373 2.01e-68 225
Msa0184980 AT3G20130.1 27.863 524 321 9 26 536 31 510 4.48e-68 228
Msa0184980 AT3G20950.1 28.108 555 330 12 4 538 13 518 2.37e-67 227
Msa0184980 AT1G33720.2 34.063 411 246 7 133 532 2 398 3.41e-67 223
Msa0184980 AT4G37310.1 28.022 546 325 12 1 529 1 495 4.06e-67 226
Msa0184980 AT4G15350.1 28.980 490 286 9 48 521 45 488 4.28e-67 226
Msa0184980 AT5G36220.1 29.346 535 300 13 4 521 8 481 4.43e-67 225
Msa0184980 AT5G47990.1 29.019 479 286 8 48 515 53 488 1.94e-66 224
Msa0184980 AT4G31940.1 29.240 513 297 13 45 530 40 513 5.77e-65 220
Msa0184980 AT3G28740.1 30.830 506 283 12 36 527 38 490 6.31e-65 220
Msa0184980 AT3G20140.1 28.317 505 308 8 26 521 31 490 7.09e-65 220
Msa0184980 AT2G14100.1 29.211 469 278 10 48 504 54 480 8.40e-65 220
Msa0184980 AT1G28430.1 29.623 530 303 10 4 519 17 490 1.34e-64 219
Msa0184980 AT3G25180.1 29.119 522 319 12 11 521 12 493 3.41e-64 218
Msa0184980 AT1G50520.1 28.330 473 285 8 46 504 52 484 4.77e-64 218
Msa0184980 AT2G23220.1 28.902 519 297 12 25 529 38 498 1.01e-63 217
Msa0184980 AT4G31970.1 29.435 513 295 14 45 530 40 512 1.09e-63 217
Msa0184980 AT5G42580.1 27.974 454 273 6 58 504 60 466 2.10e-63 216
Msa0184980 AT3G20100.1 28.953 487 287 9 46 518 50 491 2.73e-63 216
Msa0184980 AT4G37370.1 28.791 521 299 13 14 521 12 473 7.00e-63 214
Msa0184980 AT4G37360.1 28.492 537 306 15 1 521 1 475 9.41e-63 214
Msa0184980 AT2G23190.1 28.782 542 310 16 3 530 49 528 1.91e-62 214
Msa0184980 AT5G24960.2 33.820 411 221 8 28 429 23 391 5.23e-61 206
Msa0184980 AT1G50560.1 28.178 472 284 8 48 504 54 485 7.49e-61 209
Msa0184980 AT4G20240.1 29.398 432 254 10 37 460 33 421 9.31e-61 207
Msa0184980 AT3G20120.4 28.370 497 298 9 48 531 52 503 2.62e-60 207
Msa0184980 AT3G26180.2 47.368 209 107 2 324 531 158 364 2.80e-60 204
Msa0184980 AT3G26180.2 39.823 113 63 4 6 117 1 109 3.40e-17 84.0
Msa0184980 AT3G20960.2 28.602 465 276 10 65 517 69 489 4.23e-60 207
Msa0184980 AT2G27000.1 28.340 494 293 8 28 504 30 479 6.12e-60 207
Msa0184980 AT2G45580.2 47.236 199 104 1 333 531 154 351 8.69e-60 202
Msa0184980 AT4G15330.2 26.400 500 288 8 28 518 29 457 5.32e-58 201
Msa0184980 AT5G09970.1 30.074 542 293 21 5 515 30 516 2.64e-57 200
Msa0184980 AT1G74540.1 28.244 524 306 12 10 519 4 471 4.53e-57 199
Msa0184980 AT4G31950.1 27.713 516 289 15 45 530 40 501 8.03e-55 193
Msa0184980 AT3G20130.2 26.145 524 302 10 26 536 31 482 1.38e-54 192
Msa0184980 AT2G30490.1 27.172 541 316 14 1 518 1 486 1.44e-52 187
Msa0184980 AT2G46660.1 27.660 517 307 16 25 527 58 521 1.61e-52 187
Msa0184980 AT1G74110.1 29.310 522 279 17 40 528 66 530 1.96e-52 187
Msa0184980 AT3G20080.2 26.640 503 312 8 26 515 31 489 4.03e-52 186
Msa0184980 AT3G20080.1 26.640 503 312 8 26 515 31 489 4.03e-52 186
Msa0184980 AT3G53290.1 30.416 457 247 9 90 535 10 406 4.78e-52 183
Msa0184980 AT1G66540.1 28.019 414 237 8 121 523 1 364 7.14e-52 182
Msa0184980 AT2G05180.1 27.166 427 254 7 48 459 52 436 2.77e-51 182
Msa0184980 AT4G15380.1 25.974 462 288 8 63 515 68 484 1.03e-50 182
Msa0184980 AT4G20240.2 28.928 401 235 9 37 430 33 390 2.18e-50 178
Msa0184980 AT1G79370.1 26.758 512 325 11 14 505 24 505 8.52e-50 180
Msa0184980 AT3G20960.1 27.674 430 255 10 100 517 1 386 6.39e-49 175
Msa0184980 AT2G27010.1 26.680 506 292 12 28 518 26 467 1.37e-48 176
Msa0184980 AT1G13710.1 28.512 477 264 16 48 500 59 482 3.30e-48 175
Msa0184980 AT3G61880.1 28.240 517 302 18 28 527 58 522 4.73e-48 175
Msa0184980 AT1G64940.1 25.760 559 343 14 1 535 1 511 1.20e-47 173
Msa0184980 AT1G11600.1 30.255 509 308 17 31 527 29 502 1.56e-47 173
Msa0184980 AT3G61880.2 28.240 517 302 18 28 527 58 522 1.86e-47 174
Msa0184980 AT3G03470.1 26.679 521 326 14 14 516 8 490 2.88e-47 172
Msa0184980 AT3G61040.2 27.901 405 238 8 38 432 34 394 2.43e-46 167
Msa0184980 AT3G10560.1 25.992 504 313 11 14 500 20 480 3.05e-46 169
Msa0184980 AT4G39950.1 25.568 528 310 13 8 503 27 503 9.78e-45 166
Msa0184980 AT1G01190.2 26.707 498 290 16 36 515 77 517 1.26e-44 166
Msa0184980 AT1G01190.1 26.707 498 290 16 36 515 72 512 1.48e-44 165
Msa0184980 AT4G39950.2 25.568 528 310 13 8 503 67 543 2.17e-44 166
Msa0184980 AT1G58260.1 24.906 534 323 16 12 511 10 499 2.33e-44 165
Msa0184980 AT3G20090.1 27.456 397 234 8 133 518 1 354 9.45e-44 160
Msa0184980 AT2G22330.1 24.008 529 339 11 4 511 27 513 2.18e-43 162
Msa0184980 AT2G22330.2 24.008 529 339 11 4 511 50 536 4.04e-43 162
Msa0184980 AT5G05260.2 25.766 555 337 17 8 534 8 515 7.42e-43 160
Msa0184980 AT5G04630.1 26.681 476 302 14 36 500 37 476 7.82e-43 160
Msa0184980 AT2G12190.1 26.397 519 322 13 29 527 24 502 9.71e-43 160
Msa0184980 AT1G64950.1 25.856 526 330 13 30 535 25 510 5.59e-42 157
Msa0184980 AT2G25160.2 28.378 444 255 14 1 423 1 402 2.14e-41 154
Msa0184980 AT1G66540.2 28.947 342 192 7 183 523 14 305 2.40e-41 152
Msa0184980 AT5G36220.2 28.743 334 188 5 188 521 52 335 2.78e-41 152
Msa0184980 AT5G05260.1 25.405 555 307 16 8 534 8 483 1.39e-40 154
Msa0184980 AT5G61320.1 28.099 484 261 15 62 522 58 477 4.99e-40 152
Msa0184980 AT1G13090.1 32.491 277 176 6 33 300 24 298 6.55e-40 147
Msa0184980 AT2G45580.3 28.365 416 243 8 27 428 28 402 2.81e-39 148
Msa0184980 AT3G20120.2 29.392 296 161 5 241 531 115 367 5.78e-39 146
Msa0184980 AT3G20120.3 29.392 296 161 5 241 531 115 367 5.78e-39 146
Msa0184980 AT3G20120.1 29.392 296 161 5 241 531 115 367 5.78e-39 146
Msa0184980 AT3G20935.1 37.696 191 109 3 334 519 133 318 6.07e-39 145
Msa0184980 AT1G16400.1 25.097 514 342 14 3 502 13 497 1.02e-38 149
Msa0184980 AT1G16410.1 23.614 559 336 14 6 530 14 515 1.00e-37 146
Msa0184980 AT1G64930.1 25.189 528 332 16 30 535 25 511 1.58e-36 142
Msa0184980 AT3G10570.1 24.777 448 301 10 57 500 65 480 2.53e-35 139
Msa0184980 AT5G04660.1 25.170 441 295 10 64 500 70 479 2.65e-35 139
Msa0184980 AT5G25900.1 22.495 489 314 11 36 505 40 482 4.66e-35 138
Msa0184980 AT3G20080.4 25.740 338 200 6 187 515 57 352 5.39e-32 127
Msa0184980 AT3G20080.5 25.740 338 200 6 187 515 57 352 5.39e-32 127
Msa0184980 AT3G20080.6 25.740 338 200 6 187 515 57 352 5.39e-32 127
Msa0184980 AT3G20080.3 25.740 338 200 6 187 515 57 352 5.39e-32 127
Msa0184980 AT3G25180.2 24.533 428 269 11 11 424 12 399 1.57e-31 126
Msa0184980 AT1G64900.1 25.636 511 319 17 44 535 38 506 1.35e-30 125
Msa0184980 AT5G35917.1 24.667 450 253 14 36 456 41 433 4.03e-29 120
Msa0184980 AT3G53305.1 46.617 133 66 1 383 515 185 312 1.32e-28 117
Msa0184980 AT3G53305.1 32.927 164 102 4 73 228 1 164 1.89e-16 81.3
Msa0184980 AT4G20235.1 27.437 277 167 8 1 272 1 248 1.38e-27 114
Msa0184980 AT4G20235.1 42.105 76 43 1 428 502 255 330 1.79e-14 75.5
Msa0184980 AT2G45560.3 31.915 235 140 7 8 228 9 237 1.40e-27 111
Msa0184980 AT2G45560.2 28.814 295 186 9 11 288 12 299 7.88e-27 111
Msa0184980 AT1G16410.2 22.595 447 271 11 6 423 14 414 1.24e-25 109
Msa0184980 AT3G53130.1 24.051 474 293 15 41 495 80 505 2.12e-22 101
Msa0184980 AT3G14640.1 22.986 509 305 20 27 502 33 487 2.19e-22 100
Msa0184980 AT3G14640.2 22.986 509 305 19 27 502 55 509 2.51e-22 100
Msa0184980 AT4G15110.1 24.952 521 284 17 48 511 89 559 1.03e-20 96.3
Msa0184980 AT2G26170.1 25.290 518 299 19 11 494 21 484 2.56e-20 94.7
Msa0184980 AT3G14680.1 21.825 504 316 17 26 502 33 485 4.02e-20 94.0
Msa0184980 AT1G05160.2 21.803 477 303 14 37 501 45 463 5.63e-19 90.5
Msa0184980 AT1G05160.1 21.803 477 303 14 37 501 45 463 5.63e-19 90.5
Msa0184980 AT2G45510.1 29.213 178 111 5 338 502 305 480 3.36e-18 88.2
Msa0184980 AT3G14620.1 20.667 450 298 16 62 502 89 488 4.22e-18 87.8
Msa0184980 AT2G32440.2 21.893 507 320 14 3 498 16 457 1.74e-17 85.9
Msa0184980 AT2G32440.1 21.893 507 320 14 3 498 16 457 1.74e-17 85.9
Msa0184980 AT3G14610.1 20.860 465 304 14 69 519 91 505 2.99e-17 85.1
Msa0184980 AT2G44890.1 25.683 183 121 4 333 502 300 480 1.10e-16 83.6
Msa0184980 AT1G31800.1 29.146 199 132 5 310 505 352 544 1.37e-16 83.6
Msa0184980 AT3G14630.1 22.521 484 300 16 45 502 47 481 2.86e-16 82.0
Msa0184980 AT2G26170.2 41.667 108 61 2 388 494 295 401 6.60e-16 80.5
Msa0184980 AT3G14630.2 22.360 483 302 15 45 502 102 536 7.53e-16 80.9
Msa0184980 AT3G19270.2 22.421 504 310 14 15 507 12 445 2.81e-15 79.0
Msa0184980 AT1G47620.1 23.239 284 179 7 233 509 244 495 1.21e-14 77.0
Msa0184980 AT5G35920.1 34.234 111 71 1 392 500 6 116 5.72e-14 70.1
Msa0184980 AT5G24900.2 28.205 195 128 6 335 522 217 406 6.91e-14 73.9
Msa0184980 AT5G24900.1 28.205 195 128 6 335 522 334 523 1.08e-13 73.9
Msa0184980 AT2G26710.1 27.059 170 122 2 334 502 320 488 2.47e-13 72.8
Msa0184980 AT3G26125.1 25.275 182 119 3 338 502 324 505 2.90e-13 72.8
Msa0184980 AT5G38450.1 32.143 168 109 3 336 502 326 489 4.03e-13 72.4
Msa0184980 AT1G65340.1 28.161 174 120 3 338 509 313 483 4.36e-13 72.0
Msa0184980 AT1G13140.1 21.574 394 240 12 130 495 138 490 5.19e-13 72.0
Msa0184980 AT5G24910.1 21.171 444 305 14 67 502 99 505 5.89e-13 71.6
Msa0184980 AT5G52400.1 28.313 166 116 3 335 499 326 489 1.37e-12 70.5
Msa0184980 AT1G13150.1 25.463 216 146 5 302 502 275 490 1.51e-12 70.5
Msa0184980 AT1G13140.2 26.190 168 114 3 338 495 297 464 2.77e-12 69.7
Msa0184980 AT1G19630.2 22.526 475 284 17 8 461 1 412 4.29e-12 68.6
Msa0184980 AT5G05690.3 27.711 166 115 3 338 500 159 322 2.04e-11 66.2
Msa0184980 AT1G69500.1 21.212 462 282 13 85 502 73 496 2.17e-11 66.6
Msa0184980 AT5G05690.1 27.711 166 115 3 338 500 278 441 2.31e-11 66.6

Find 117 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTATAATTGGTAGCTTTAT+TGG 0.107418 1_4:-74683590 None:intergenic
TGCATTATTTCACTGGTTTA+AGG 0.122417 1_4:+74684152 Msa0184980:CDS
TCAAGGGAATCTGTTATATT+TGG 0.169092 1_4:-74684379 None:intergenic
CATCTCCTTATGGTAATTAT+TGG 0.176141 1_4:+74683837 Msa0184980:CDS
TGTGCTTTCTTCATAACTTT+TGG 0.177680 1_4:-74684881 None:intergenic
GAGAACTCTTCTTCTCTAAT+TGG 0.217555 1_4:-74683923 None:intergenic
AACAAGGAATAACTGGTTTA+AGG 0.219884 1_4:+74684248 Msa0184980:CDS
AGCAATCCATTTGACAATAT+TGG 0.220075 1_4:-74683945 None:intergenic
ATATGCCCAGGGAGCATATT+TGG 0.227610 1_4:+74685235 Msa0184980:CDS
ACGACCACCTTAGTCTTAAT+TGG 0.228656 1_4:-74685076 None:intergenic
CTTCTTGCCAAAGGCAGATT+TGG 0.255741 1_4:-74684032 None:intergenic
TTGGACATGACCGAGGAATT+TGG 0.256803 1_4:+74685340 Msa0184980:CDS
TTGTGTAAATTTCCTATAAT+TGG 0.268961 1_4:-74683602 None:intergenic
TTCTACCATTGCCCAATCTA+TGG 0.288739 1_4:-74684846 None:intergenic
AATTCCGAAGCTAGGACTTT+AGG 0.292876 1_4:-74683785 None:intergenic
GGAAACGCTATTGACTATAA+AGG 0.295416 1_4:+74685172 Msa0184980:CDS
TGACGACTGATTTCAAATAA+TGG 0.296460 1_4:-74684967 None:intergenic
ATGATATTAACTTTGCAATA+AGG 0.302055 1_4:+74683762 Msa0184980:CDS
AGAGACTTGGCCAGAAAATA+TGG 0.303414 1_4:+74683656 Msa0184980:CDS
CCAATAAAGCTACCAATTAT+AGG 0.310453 1_4:+74683590 Msa0184980:CDS
GGTAGCTTTATTGGCCCTTT+AGG 0.313593 1_4:-74683581 None:intergenic
GCACAGGAATGTGTAGTCTA+AGG 0.313618 1_4:-74684997 None:intergenic
CAATATCAAGGCTATAATTC+TGG 0.336701 1_4:+74684339 Msa0184980:CDS
TCTGGTTCAGTCCAGTAGTT+TGG 0.337087 1_4:-74685124 None:intergenic
GGTATAATTTCATCTCCTTA+TGG 0.340822 1_4:+74683827 Msa0184980:CDS
CCGCCGATATAAACTTATCT+TGG 0.345151 1_4:-74684063 None:intergenic
TACACCTTGAGTGAGGTTAA+TGG 0.346057 1_4:-74683984 None:intergenic
ACACCTTGAGTGAGGTTAAT+GGG 0.368641 1_4:-74683983 None:intergenic
GAGGCTAAACAAGGAATAAC+TGG 0.372937 1_4:+74684241 Msa0184980:CDS
TGGAATCAAAAGCGAAGAAT+TGG 0.375550 1_4:+74685321 Msa0184980:CDS
ATTCTTTCCAAATCTGCCTT+TGG 0.376487 1_4:+74684025 Msa0184980:CDS
CTCTCTGGATAAAATTTCTC+TGG 0.397381 1_4:-74685142 None:intergenic
CCCTTGATGCATCTTCAACT+TGG 0.414015 1_4:+74683680 Msa0184980:CDS
TAATGCATCCATGTAATAGA+AGG 0.420655 1_4:-74684136 None:intergenic
GGGCAATGGTAGAAATGATA+AGG 0.425387 1_4:+74684855 Msa0184980:CDS
CATCAGCAAGCACCATAGAT+TGG 0.427902 1_4:+74684834 Msa0184980:CDS
TCGACAGGTTGATCAGATAA+TGG 0.428126 1_4:+74684195 Msa0184980:CDS
CAACTTATAACCTTCCTAAA+GGG 0.438018 1_4:+74683567 Msa0184980:CDS
AGTTGTTTCCTTCTATTACA+TGG 0.438211 1_4:+74684128 Msa0184980:CDS
GAAACGCTATTGACTATAAA+GGG 0.447026 1_4:+74685173 Msa0184980:CDS
TTCCACTTAAAAGATATTCA+AGG 0.451319 1_4:-74684396 None:intergenic
TCTAACTAAAGACAATATCA+AGG 0.463649 1_4:+74684327 Msa0184980:CDS
ATCAGCAAGCACCATAGATT+GGG 0.464173 1_4:+74684835 Msa0184980:CDS
ACATGGATGCATTATTTCAC+TGG 0.464643 1_4:+74684145 Msa0184980:CDS
CACTCTCTTGGTAGTAAAAG+AGG 0.475300 1_4:-74685019 None:intergenic
GCGTTTCCCATGAATCTCTC+TGG 0.477933 1_4:-74685157 None:intergenic
TTTCATCACCTGACTGTGCT+AGG 0.479163 1_4:+74683723 Msa0184980:CDS
CTCAAACCAAATATGCTCCC+TGG 0.480427 1_4:-74685241 None:intergenic
AGTTCTCCAATATTGTCAAA+TGG 0.482165 1_4:+74683939 Msa0184980:CDS
CCTTGAGAGGGTGCATCGAC+AGG 0.484063 1_4:+74684180 Msa0184980:CDS
AAGAAATTAATTCCGAAGCT+AGG 0.487979 1_4:-74683793 None:intergenic
ACTCTTCTTCTCTAATTGGC+TGG 0.497277 1_4:-74683919 None:intergenic
TCACATACCAATTAAGACTA+AGG 0.500585 1_4:+74685069 Msa0184980:CDS
ATCACCTCCCTAGCACAGTC+AGG 0.503650 1_4:-74683731 None:intergenic
AGACCAAGATAAGTTTATAT+CGG 0.504533 1_4:+74684060 Msa0184980:CDS
TTAATTTCTTATAATTCCAC+AGG 0.505742 1_4:+74683806 Msa0184980:CDS
GGCAATGGTAGAAATGATAA+GGG 0.505891 1_4:+74684856 Msa0184980:CDS
GGCAAAGGATGATAAACAAA+AGG 0.507764 1_4:-74685400 None:intergenic
AAATGGATTGCTTCCGAGGA+AGG 0.509490 1_4:+74683956 Msa0184980:CDS
AAGGCCTAAAGTCCTAGCTT+CGG 0.512758 1_4:+74683781 Msa0184980:CDS
TCAACTTATAACCTTCCTAA+AGG 0.513124 1_4:+74683566 Msa0184980:CDS
TGTCTCCAATAATTACCATA+AGG 0.516677 1_4:-74683842 None:intergenic
CATGCTTGACCACACTCTCT+TGG 0.517336 1_4:-74685031 None:intergenic
TCGCAAGAGATCCAAACTAC+TGG 0.520277 1_4:+74685113 Msa0184980:CDS
ATTCTTCGTCCTGCACCAAA+AGG 0.523400 1_4:-74685214 None:intergenic
TCCAAGTTGAAGATGCATCA+AGG 0.523441 1_4:-74683681 None:intergenic
TCCACTTAAAAGATATTCAA+GGG 0.526686 1_4:-74684395 None:intergenic
GAGTTGATAAAGATTGCAGC+AGG 0.526967 1_4:+74684091 Msa0184980:CDS
CTTGGTAGTAAAAGAGGCAC+AGG 0.527800 1_4:-74685013 None:intergenic
TCTCATGTTAAAGTTCGTCT+TGG 0.528656 1_4:+74684439 Msa0184980:CDS
CCTGTCGATGCACCCTCTCA+AGG 0.529260 1_4:-74684180 None:intergenic
AATAGAATAACAATGTTGCA+AGG 0.529876 1_4:-74685279 None:intergenic
TGTCAAATGGATTGCTTCCG+AGG 0.530943 1_4:+74683952 Msa0184980:CDS
TTCATCACCTGACTGTGCTA+GGG 0.531506 1_4:+74683724 Msa0184980:CDS
TCAAACCAAATATGCTCCCT+GGG 0.533323 1_4:-74685240 None:intergenic
GTCTTTACACTTCTTGCCAA+AGG 0.540103 1_4:-74684041 None:intergenic
TCTAGTTAAGCTCACATGAC+AGG 0.541017 1_4:-74685421 None:intergenic
AGAAAAGATATGACAAGTAG+AGG 0.541920 1_4:-74683484 None:intergenic
GCTTTATTGGCCCTTTAGGA+AGG 0.546707 1_4:-74683577 None:intergenic
CACTGCGACTCCAAATTCCT+CGG 0.547512 1_4:-74685350 None:intergenic
GGTCAAGCATGTGAGATTCA+TGG 0.551237 1_4:+74685043 Msa0184980:CDS
GTTTAAGGCCTACCCTTGAG+AGG 0.555690 1_4:+74684167 Msa0184980:CDS
CACAGGAATGTGTAGTCTAA+GGG 0.556551 1_4:-74684996 None:intergenic
CTAAGGTGGTCGTCAATGCA+TGG 0.564358 1_4:+74685086 Msa0184980:CDS
AGCACAAGATGAGGTGAGAG+AGG 0.569716 1_4:+74684898 Msa0184980:CDS
GTAGAGGACTAGTAGAGCCA+TGG 0.573691 1_4:-74683468 None:intergenic
GCAGGACGAAGAATATGCCC+AGG 0.574903 1_4:+74685223 Msa0184980:CDS
CCAAGTTGAAGATGCATCAA+GGG 0.578944 1_4:-74683680 None:intergenic
CTGTCGATGCACCCTCTCAA+GGG 0.581193 1_4:-74684179 None:intergenic
TTTGTACAACAATGGCTAAG+AGG 0.582797 1_4:-74683514 None:intergenic
TTTAAGGCCTACCCTTGAGA+GGG 0.582902 1_4:+74684168 Msa0184980:CDS
TAAGCTCACATGACAGGCAA+AGG 0.582976 1_4:-74685415 None:intergenic
ATAGAATAACAATGTTGCAA+GGG 0.589053 1_4:-74685278 None:intergenic
ATGAGAACATCTACCAGGGT+AGG 0.593673 1_4:-74684271 None:intergenic
CGATGCACCCTCTCAAGGGT+AGG 0.597257 1_4:-74684175 None:intergenic
GTTAATGGGTGATCCTTCCT+CGG 0.598010 1_4:-74683969 None:intergenic
TAAGGTGGTCGTCAATGCAT+GGG 0.600011 1_4:+74685087 Msa0184980:CDS
AACTGGTTTAAGGCCTACCC+TGG 0.601771 1_4:+74684258 Msa0184980:CDS
ATCACCTGACTGTGCTAGGG+AGG 0.602191 1_4:+74683727 Msa0184980:CDS
GTTCTCATAAAATATGAAGA+CGG 0.612637 1_4:+74684286 Msa0184980:CDS
CATCATCAATGAGCACAAAG+AGG 0.615332 1_4:+74684222 Msa0184980:CDS
AGACGAACTTTAACATGAGA+CGG 0.615472 1_4:-74684436 None:intergenic
TATGAAGAAAGCACAAGATG+AGG 0.616257 1_4:+74684889 Msa0184980:CDS
AGGAGATGAAATTATACCTG+TGG 0.619165 1_4:-74683822 None:intergenic
CCAAGATAAGTTTATATCGG+CGG 0.624248 1_4:+74684063 Msa0184980:CDS
AAGAAATTACACCTTGAGTG+AGG 0.627522 1_4:-74683991 None:intergenic
GAGCACAAAGAGGCTAAACA+AGG 0.636508 1_4:+74684232 Msa0184980:CDS
TCACCCATTAACCTCACTCA+AGG 0.636789 1_4:+74683980 Msa0184980:CDS
CGAAGAATTGGACATGACCG+AGG 0.640626 1_4:+74685333 Msa0184980:CDS
GCCATTGTTGTACAAAACGT+AGG 0.654824 1_4:+74683521 Msa0184980:CDS
CATACCAATTAAGACTAAGG+TGG 0.671400 1_4:+74685072 Msa0184980:CDS
AAGCACCATAGATTGGGCAA+TGG 0.671942 1_4:+74684841 Msa0184980:CDS
AACAATGGCTAAGAGGACAA+AGG 0.672531 1_4:-74683507 None:intergenic
TTTGATTGGAAGCTTCCCGG+TGG 0.680090 1_4:+74685301 Msa0184980:CDS
ATATGAAGACGGAAACAACA+AGG 0.681274 1_4:+74684297 Msa0184980:CDS
CAGGACGAAGAATATGCCCA+GGG 0.702734 1_4:+74685224 Msa0184980:CDS
CGAACTTTAACATGAGACGG+AGG 0.721208 1_4:-74684433 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGTTCTTAATATATAA+TGG - chr1_4:74684549-74684568 None:intergenic 10.0%
!! AAAATGTTCTTAATATATAA+TGG - chr1_4:74684549-74684568 None:intergenic 10.0%
!!! TTTTAGTCAACAAATATTAT+TGG + chr1_4:74684565-74684584 Msa0184980:intron 15.0%
!!! TTTTAGTCAACAAATATTAT+TGG + chr1_4:74684565-74684584 Msa0184980:intron 15.0%
!! TTGTGTAAATTTCCTATAAT+TGG - chr1_4:74683605-74683624 None:intergenic 20.0%
!! ATGATATTAACTTTGCAATA+AGG + chr1_4:74683762-74683781 Msa0184980:CDS 20.0%
!! TTAATTTCTTATAATTCCAC+AGG + chr1_4:74683806-74683825 Msa0184980:CDS 20.0%
!! TTAATATATAATGGCATAAG+TGG - chr1_4:74684540-74684559 None:intergenic 20.0%
!! AATAGAACCGAAAAAATTTA+GGG - chr1_4:74684671-74684690 None:intergenic 20.0%
!! AAATAGAACCGAAAAAATTT+AGG - chr1_4:74684672-74684691 None:intergenic 20.0%
!!! GTCTAATATTTTGAACTTAA+GGG - chr1_4:74684699-74684718 None:intergenic 20.0%
!!! TGTCTAATATTTTGAACTTA+AGG - chr1_4:74684700-74684719 None:intergenic 20.0%
!! GTTCAAAATATTAGACAAAT+TGG + chr1_4:74684703-74684722 Msa0184980:intron 20.0%
!!! CATTGTTATTCTATTTTGAT+TGG + chr1_4:74685287-74685306 Msa0184980:CDS 20.0%
!! TTGTGTAAATTTCCTATAAT+TGG - chr1_4:74683605-74683624 None:intergenic 20.0%
!! ATGATATTAACTTTGCAATA+AGG + chr1_4:74683762-74683781 Msa0184980:CDS 20.0%
!! TTAATTTCTTATAATTCCAC+AGG + chr1_4:74683806-74683825 Msa0184980:CDS 20.0%
!! TTAATATATAATGGCATAAG+TGG - chr1_4:74684540-74684559 None:intergenic 20.0%
!! AATAGAACCGAAAAAATTTA+GGG - chr1_4:74684671-74684690 None:intergenic 20.0%
!! AAATAGAACCGAAAAAATTT+AGG - chr1_4:74684672-74684691 None:intergenic 20.0%
!!! GTCTAATATTTTGAACTTAA+GGG - chr1_4:74684699-74684718 None:intergenic 20.0%
!!! TGTCTAATATTTTGAACTTA+AGG - chr1_4:74684700-74684719 None:intergenic 20.0%
!! GTTCAAAATATTAGACAAAT+TGG + chr1_4:74684703-74684722 Msa0184980:intron 20.0%
!!! CATTGTTATTCTATTTTGAT+TGG + chr1_4:74685287-74685306 Msa0184980:CDS 20.0%
!!! AAGTCTCTTAGTTTTTTATG+TGG - chr1_4:74683644-74683663 None:intergenic 25.0%
! ACATAAAAAACTAAGAGACT+TGG + chr1_4:74683643-74683662 Msa0184980:CDS 25.0%
! AGACCAAGATAAGTTTATAT+CGG + chr1_4:74684060-74684079 Msa0184980:CDS 25.0%
! GTTCTCATAAAATATGAAGA+CGG + chr1_4:74684286-74684305 Msa0184980:CDS 25.0%
! TCTAACTAAAGACAATATCA+AGG + chr1_4:74684327-74684346 Msa0184980:CDS 25.0%
! TCCACTTAAAAGATATTCAA+GGG - chr1_4:74684398-74684417 None:intergenic 25.0%
! TTCCACTTAAAAGATATTCA+AGG - chr1_4:74684399-74684418 None:intergenic 25.0%
! TATTGGCAAAATTACACTTT+CGG + chr1_4:74684582-74684601 Msa0184980:intron 25.0%
!! TTTCGGTCTCAAAATTTTTA+AGG + chr1_4:74684599-74684618 Msa0184980:intron 25.0%
!!! TTTTAAGGTTTGTTCCATTT+TGG + chr1_4:74684614-74684633 Msa0184980:intron 25.0%
!!! CTTTAGTCCCTAAATTTTTT+CGG + chr1_4:74684661-74684680 Msa0184980:intron 25.0%
!!! TAATATTTTGAACTTAAGGG+AGG - chr1_4:74684696-74684715 None:intergenic 25.0%
!! ACTTTAAGGACATAGTTAAA+AGG - chr1_4:74684742-74684761 None:intergenic 25.0%
! TCGTAGATGTTTAAACTTTA+AGG - chr1_4:74684756-74684775 None:intergenic 25.0%
! AATAACTATCAATAAGGTCA+AGG - chr1_4:74684783-74684802 None:intergenic 25.0%
! CTGAACAATAACTATCAATA+AGG - chr1_4:74684789-74684808 None:intergenic 25.0%
!! CTTATTGATAGTTATTGTTC+AGG + chr1_4:74684787-74684806 Msa0184980:intron 25.0%
! ATAGAATAACAATGTTGCAA+GGG - chr1_4:74685281-74685300 None:intergenic 25.0%
! AATAGAATAACAATGTTGCA+AGG - chr1_4:74685282-74685301 None:intergenic 25.0%
!!! AAGTCTCTTAGTTTTTTATG+TGG - chr1_4:74683644-74683663 None:intergenic 25.0%
! ACATAAAAAACTAAGAGACT+TGG + chr1_4:74683643-74683662 Msa0184980:CDS 25.0%
! AGACCAAGATAAGTTTATAT+CGG + chr1_4:74684060-74684079 Msa0184980:CDS 25.0%
! GTTCTCATAAAATATGAAGA+CGG + chr1_4:74684286-74684305 Msa0184980:CDS 25.0%
! TCTAACTAAAGACAATATCA+AGG + chr1_4:74684327-74684346 Msa0184980:CDS 25.0%
! TCCACTTAAAAGATATTCAA+GGG - chr1_4:74684398-74684417 None:intergenic 25.0%
! TTCCACTTAAAAGATATTCA+AGG - chr1_4:74684399-74684418 None:intergenic 25.0%
! TATTGGCAAAATTACACTTT+CGG + chr1_4:74684582-74684601 Msa0184980:intron 25.0%
!! TTTCGGTCTCAAAATTTTTA+AGG + chr1_4:74684599-74684618 Msa0184980:intron 25.0%
!!! TTTTAAGGTTTGTTCCATTT+TGG + chr1_4:74684614-74684633 Msa0184980:intron 25.0%
!!! CTTTAGTCCCTAAATTTTTT+CGG + chr1_4:74684661-74684680 Msa0184980:intron 25.0%
!!! TAATATTTTGAACTTAAGGG+AGG - chr1_4:74684696-74684715 None:intergenic 25.0%
!! ACTTTAAGGACATAGTTAAA+AGG - chr1_4:74684742-74684761 None:intergenic 25.0%
! TCGTAGATGTTTAAACTTTA+AGG - chr1_4:74684756-74684775 None:intergenic 25.0%
! AATAACTATCAATAAGGTCA+AGG - chr1_4:74684783-74684802 None:intergenic 25.0%
! CTGAACAATAACTATCAATA+AGG - chr1_4:74684789-74684808 None:intergenic 25.0%
!! CTTATTGATAGTTATTGTTC+AGG + chr1_4:74684787-74684806 Msa0184980:intron 25.0%
! ATAGAATAACAATGTTGCAA+GGG - chr1_4:74685281-74685300 None:intergenic 25.0%
! AATAGAATAACAATGTTGCA+AGG - chr1_4:74685282-74685301 None:intergenic 25.0%
AGAAAAGATATGACAAGTAG+AGG - chr1_4:74683487-74683506 None:intergenic 30.0%
TCAACTTATAACCTTCCTAA+AGG + chr1_4:74683566-74683585 Msa0184980:CDS 30.0%
CAACTTATAACCTTCCTAAA+GGG + chr1_4:74683567-74683586 Msa0184980:CDS 30.0%
!! CCTATAATTGGTAGCTTTAT+TGG - chr1_4:74683593-74683612 None:intergenic 30.0%
CCAATAAAGCTACCAATTAT+AGG + chr1_4:74683590-74683609 Msa0184980:CDS 30.0%
AAGAAATTAATTCCGAAGCT+AGG - chr1_4:74683796-74683815 None:intergenic 30.0%
GGTATAATTTCATCTCCTTA+TGG + chr1_4:74683827-74683846 Msa0184980:CDS 30.0%
CATCTCCTTATGGTAATTAT+TGG + chr1_4:74683837-74683856 Msa0184980:CDS 30.0%
TGTCTCCAATAATTACCATA+AGG - chr1_4:74683845-74683864 None:intergenic 30.0%
AGTTCTCCAATATTGTCAAA+TGG + chr1_4:74683939-74683958 Msa0184980:CDS 30.0%
AGCAATCCATTTGACAATAT+TGG - chr1_4:74683948-74683967 None:intergenic 30.0%
! AGTTGTTTCCTTCTATTACA+TGG + chr1_4:74684128-74684147 Msa0184980:CDS 30.0%
TAATGCATCCATGTAATAGA+AGG - chr1_4:74684139-74684158 None:intergenic 30.0%
!! TGCATTATTTCACTGGTTTA+AGG + chr1_4:74684152-74684171 Msa0184980:CDS 30.0%
! AACAAGGAATAACTGGTTTA+AGG + chr1_4:74684248-74684267 Msa0184980:CDS 30.0%
! TTTTATGAGAACATCTACCA+GGG - chr1_4:74684278-74684297 None:intergenic 30.0%
! ATTTTATGAGAACATCTACC+AGG - chr1_4:74684279-74684298 None:intergenic 30.0%
CAATATCAAGGCTATAATTC+TGG + chr1_4:74684339-74684358 Msa0184980:CDS 30.0%
TCAAGGGAATCTGTTATATT+TGG - chr1_4:74684382-74684401 None:intergenic 30.0%
! TCCCTTGAATATCTTTTAAG+TGG + chr1_4:74684394-74684413 Msa0184980:CDS 30.0%
TGGCATAAGTGGAATATAAT+TGG - chr1_4:74684529-74684548 None:intergenic 30.0%
TGCTAACATTCGTAACTTAA+GGG - chr1_4:74684641-74684660 None:intergenic 30.0%
! GTTATTGTTCAGGACATTTT+TGG + chr1_4:74684797-74684816 Msa0184980:intron 30.0%
! TGTGCTTTCTTCATAACTTT+TGG - chr1_4:74684884-74684903 None:intergenic 30.0%
! AGAGAGGTTTTCAAAATGAA+AGG + chr1_4:74684914-74684933 Msa0184980:CDS 30.0%
! AGGTTTTCAAAATGAAAGGA+AGG + chr1_4:74684918-74684937 Msa0184980:CDS 30.0%
! GGTTTTCAAAATGAAAGGAA+GGG + chr1_4:74684919-74684938 Msa0184980:CDS 30.0%
! TGACGACTGATTTCAAATAA+TGG - chr1_4:74684970-74684989 None:intergenic 30.0%
TCACATACCAATTAAGACTA+AGG + chr1_4:74685069-74685088 Msa0184980:CDS 30.0%
! ATTTTATCCAGAGAGATTCA+TGG + chr1_4:74685150-74685169 Msa0184980:CDS 30.0%
! TTTTATCCAGAGAGATTCAT+GGG + chr1_4:74685151-74685170 Msa0184980:CDS 30.0%
! GAAACGCTATTGACTATAAA+GGG + chr1_4:74685173-74685192 Msa0184980:CDS 30.0%
!! GATTTTGAGTACATTCCTTT+TGG + chr1_4:74685199-74685218 Msa0184980:CDS 30.0%
AGAAAAGATATGACAAGTAG+AGG - chr1_4:74683487-74683506 None:intergenic 30.0%
TCAACTTATAACCTTCCTAA+AGG + chr1_4:74683566-74683585 Msa0184980:CDS 30.0%
CAACTTATAACCTTCCTAAA+GGG + chr1_4:74683567-74683586 Msa0184980:CDS 30.0%
!! CCTATAATTGGTAGCTTTAT+TGG - chr1_4:74683593-74683612 None:intergenic 30.0%
CCAATAAAGCTACCAATTAT+AGG + chr1_4:74683590-74683609 Msa0184980:CDS 30.0%
AAGAAATTAATTCCGAAGCT+AGG - chr1_4:74683796-74683815 None:intergenic 30.0%
GGTATAATTTCATCTCCTTA+TGG + chr1_4:74683827-74683846 Msa0184980:CDS 30.0%
CATCTCCTTATGGTAATTAT+TGG + chr1_4:74683837-74683856 Msa0184980:CDS 30.0%
TGTCTCCAATAATTACCATA+AGG - chr1_4:74683845-74683864 None:intergenic 30.0%
AGTTCTCCAATATTGTCAAA+TGG + chr1_4:74683939-74683958 Msa0184980:CDS 30.0%
AGCAATCCATTTGACAATAT+TGG - chr1_4:74683948-74683967 None:intergenic 30.0%
! AGTTGTTTCCTTCTATTACA+TGG + chr1_4:74684128-74684147 Msa0184980:CDS 30.0%
TAATGCATCCATGTAATAGA+AGG - chr1_4:74684139-74684158 None:intergenic 30.0%
!! TGCATTATTTCACTGGTTTA+AGG + chr1_4:74684152-74684171 Msa0184980:CDS 30.0%
! AACAAGGAATAACTGGTTTA+AGG + chr1_4:74684248-74684267 Msa0184980:CDS 30.0%
! TTTTATGAGAACATCTACCA+GGG - chr1_4:74684278-74684297 None:intergenic 30.0%
! ATTTTATGAGAACATCTACC+AGG - chr1_4:74684279-74684298 None:intergenic 30.0%
CAATATCAAGGCTATAATTC+TGG + chr1_4:74684339-74684358 Msa0184980:CDS 30.0%
TCAAGGGAATCTGTTATATT+TGG - chr1_4:74684382-74684401 None:intergenic 30.0%
! TCCCTTGAATATCTTTTAAG+TGG + chr1_4:74684394-74684413 Msa0184980:CDS 30.0%
TGGCATAAGTGGAATATAAT+TGG - chr1_4:74684529-74684548 None:intergenic 30.0%
TGCTAACATTCGTAACTTAA+GGG - chr1_4:74684641-74684660 None:intergenic 30.0%
! GTTATTGTTCAGGACATTTT+TGG + chr1_4:74684797-74684816 Msa0184980:intron 30.0%
! TGTGCTTTCTTCATAACTTT+TGG - chr1_4:74684884-74684903 None:intergenic 30.0%
! AGAGAGGTTTTCAAAATGAA+AGG + chr1_4:74684914-74684933 Msa0184980:CDS 30.0%
! AGGTTTTCAAAATGAAAGGA+AGG + chr1_4:74684918-74684937 Msa0184980:CDS 30.0%
! GGTTTTCAAAATGAAAGGAA+GGG + chr1_4:74684919-74684938 Msa0184980:CDS 30.0%
! TGACGACTGATTTCAAATAA+TGG - chr1_4:74684970-74684989 None:intergenic 30.0%
TCACATACCAATTAAGACTA+AGG + chr1_4:74685069-74685088 Msa0184980:CDS 30.0%
! ATTTTATCCAGAGAGATTCA+TGG + chr1_4:74685150-74685169 Msa0184980:CDS 30.0%
! TTTTATCCAGAGAGATTCAT+GGG + chr1_4:74685151-74685170 Msa0184980:CDS 30.0%
! GAAACGCTATTGACTATAAA+GGG + chr1_4:74685173-74685192 Msa0184980:CDS 30.0%
!! GATTTTGAGTACATTCCTTT+TGG + chr1_4:74685199-74685218 Msa0184980:CDS 30.0%
TTTGTACAACAATGGCTAAG+AGG - chr1_4:74683517-74683536 None:intergenic 35.0%
! TCCTACGTTTTGTACAACAA+TGG - chr1_4:74683525-74683544 None:intergenic 35.0%
AGGAGATGAAATTATACCTG+TGG - chr1_4:74683825-74683844 None:intergenic 35.0%
! GCTACGAAAAATTTGTTCCT+CGG + chr1_4:74683865-74683884 Msa0184980:CDS 35.0%
GAGAACTCTTCTTCTCTAAT+TGG - chr1_4:74683926-74683945 None:intergenic 35.0%
AAGAAATTACACCTTGAGTG+AGG - chr1_4:74683994-74684013 None:intergenic 35.0%
ATTCTTTCCAAATCTGCCTT+TGG + chr1_4:74684025-74684044 Msa0184980:CDS 35.0%
CCAAGATAAGTTTATATCGG+CGG + chr1_4:74684063-74684082 Msa0184980:CDS 35.0%
ACATGGATGCATTATTTCAC+TGG + chr1_4:74684145-74684164 Msa0184980:CDS 35.0%
ATATGAAGACGGAAACAACA+AGG + chr1_4:74684297-74684316 Msa0184980:CDS 35.0%
AGACGAACTTTAACATGAGA+CGG - chr1_4:74684439-74684458 None:intergenic 35.0%
TCTCATGTTAAAGTTCGTCT+TGG + chr1_4:74684439-74684458 Msa0184980:CDS 35.0%
GTGCTAACATTCGTAACTTA+AGG - chr1_4:74684642-74684661 None:intergenic 35.0%
! GACAAATTGGTCCTTTTTGT+CGG + chr1_4:74684716-74684735 Msa0184980:intron 35.0%
TAGTTAAAAGGCCGACAAAA+AGG - chr1_4:74684730-74684749 None:intergenic 35.0%
GGCAATGGTAGAAATGATAA+GGG + chr1_4:74684856-74684875 Msa0184980:CDS 35.0%
! TATGAAGAAAGCACAAGATG+AGG + chr1_4:74684889-74684908 Msa0184980:CDS 35.0%
CATACCAATTAAGACTAAGG+TGG + chr1_4:74685072-74685091 Msa0184980:CDS 35.0%
CTCTCTGGATAAAATTTCTC+TGG - chr1_4:74685145-74685164 None:intergenic 35.0%
! GGAAACGCTATTGACTATAA+AGG + chr1_4:74685172-74685191 Msa0184980:CDS 35.0%
!!! TATTTTGATTGGAAGCTTCC+CGG + chr1_4:74685298-74685317 Msa0184980:CDS 35.0%
TGGAATCAAAAGCGAAGAAT+TGG + chr1_4:74685321-74685340 Msa0184980:CDS 35.0%
GGCAAAGGATGATAAACAAA+AGG - chr1_4:74685403-74685422 None:intergenic 35.0%
TTTGTACAACAATGGCTAAG+AGG - chr1_4:74683517-74683536 None:intergenic 35.0%
! TCCTACGTTTTGTACAACAA+TGG - chr1_4:74683525-74683544 None:intergenic 35.0%
AGGAGATGAAATTATACCTG+TGG - chr1_4:74683825-74683844 None:intergenic 35.0%
! GCTACGAAAAATTTGTTCCT+CGG + chr1_4:74683865-74683884 Msa0184980:CDS 35.0%
GAGAACTCTTCTTCTCTAAT+TGG - chr1_4:74683926-74683945 None:intergenic 35.0%
AAGAAATTACACCTTGAGTG+AGG - chr1_4:74683994-74684013 None:intergenic 35.0%
ATTCTTTCCAAATCTGCCTT+TGG + chr1_4:74684025-74684044 Msa0184980:CDS 35.0%
CCAAGATAAGTTTATATCGG+CGG + chr1_4:74684063-74684082 Msa0184980:CDS 35.0%
ACATGGATGCATTATTTCAC+TGG + chr1_4:74684145-74684164 Msa0184980:CDS 35.0%
ATATGAAGACGGAAACAACA+AGG + chr1_4:74684297-74684316 Msa0184980:CDS 35.0%
AGACGAACTTTAACATGAGA+CGG - chr1_4:74684439-74684458 None:intergenic 35.0%
TCTCATGTTAAAGTTCGTCT+TGG + chr1_4:74684439-74684458 Msa0184980:CDS 35.0%
GTGCTAACATTCGTAACTTA+AGG - chr1_4:74684642-74684661 None:intergenic 35.0%
! GACAAATTGGTCCTTTTTGT+CGG + chr1_4:74684716-74684735 Msa0184980:intron 35.0%
TAGTTAAAAGGCCGACAAAA+AGG - chr1_4:74684730-74684749 None:intergenic 35.0%
GGCAATGGTAGAAATGATAA+GGG + chr1_4:74684856-74684875 Msa0184980:CDS 35.0%
! TATGAAGAAAGCACAAGATG+AGG + chr1_4:74684889-74684908 Msa0184980:CDS 35.0%
CATACCAATTAAGACTAAGG+TGG + chr1_4:74685072-74685091 Msa0184980:CDS 35.0%
CTCTCTGGATAAAATTTCTC+TGG - chr1_4:74685145-74685164 None:intergenic 35.0%
! GGAAACGCTATTGACTATAA+AGG + chr1_4:74685172-74685191 Msa0184980:CDS 35.0%
!!! TATTTTGATTGGAAGCTTCC+CGG + chr1_4:74685298-74685317 Msa0184980:CDS 35.0%
TGGAATCAAAAGCGAAGAAT+TGG + chr1_4:74685321-74685340 Msa0184980:CDS 35.0%
GGCAAAGGATGATAAACAAA+AGG - chr1_4:74685403-74685422 None:intergenic 35.0%
AACAATGGCTAAGAGGACAA+AGG - chr1_4:74683510-74683529 None:intergenic 40.0%
GCCATTGTTGTACAAAACGT+AGG + chr1_4:74683521-74683540 Msa0184980:CDS 40.0%
AGAGACTTGGCCAGAAAATA+TGG + chr1_4:74683656-74683675 Msa0184980:CDS 40.0%
! CATCAAGGGTCCATATTTTC+TGG - chr1_4:74683669-74683688 None:intergenic 40.0%
! CCAAGTTGAAGATGCATCAA+GGG - chr1_4:74683683-74683702 None:intergenic 40.0%
! TCCAAGTTGAAGATGCATCA+AGG - chr1_4:74683684-74683703 None:intergenic 40.0%
AATTCCGAAGCTAGGACTTT+AGG - chr1_4:74683788-74683807 None:intergenic 40.0%
! TTTTATGCTCAAAAGCTCCG+AGG - chr1_4:74683885-74683904 None:intergenic 40.0%
ACTCTTCTTCTCTAATTGGC+TGG - chr1_4:74683922-74683941 None:intergenic 40.0%
ACACCTTGAGTGAGGTTAAT+GGG - chr1_4:74683986-74684005 None:intergenic 40.0%
TACACCTTGAGTGAGGTTAA+TGG - chr1_4:74683987-74684006 None:intergenic 40.0%
GTCTTTACACTTCTTGCCAA+AGG - chr1_4:74684044-74684063 None:intergenic 40.0%
CCGCCGATATAAACTTATCT+TGG - chr1_4:74684066-74684085 None:intergenic 40.0%
!! GAGTTGATAAAGATTGCAGC+AGG + chr1_4:74684091-74684110 Msa0184980:CDS 40.0%
!! TCGACAGGTTGATCAGATAA+TGG + chr1_4:74684195-74684214 Msa0184980:CDS 40.0%
CATCATCAATGAGCACAAAG+AGG + chr1_4:74684222-74684241 Msa0184980:CDS 40.0%
GAGGCTAAACAAGGAATAAC+TGG + chr1_4:74684241-74684260 Msa0184980:CDS 40.0%
CGTAACTTAAGGGACCAAAA+TGG - chr1_4:74684631-74684650 None:intergenic 40.0%
ATCAGCAAGCACCATAGATT+GGG + chr1_4:74684835-74684854 Msa0184980:CDS 40.0%
TTCTACCATTGCCCAATCTA+TGG - chr1_4:74684849-74684868 None:intergenic 40.0%
GGGCAATGGTAGAAATGATA+AGG + chr1_4:74684855-74684874 Msa0184980:CDS 40.0%
CACAGGAATGTGTAGTCTAA+GGG - chr1_4:74684999-74685018 None:intergenic 40.0%
! CACTCTCTTGGTAGTAAAAG+AGG - chr1_4:74685022-74685041 None:intergenic 40.0%
! CTTTTACTACCAAGAGAGTG+TGG + chr1_4:74685022-74685041 Msa0184980:CDS 40.0%
!! ACGACCACCTTAGTCTTAAT+TGG - chr1_4:74685079-74685098 None:intergenic 40.0%
TCAAACCAAATATGCTCCCT+GGG - chr1_4:74685243-74685262 None:intergenic 40.0%
!! TTCTTCGCTTTTGATTCCAC+CGG - chr1_4:74685320-74685339 None:intergenic 40.0%
AACAATGGCTAAGAGGACAA+AGG - chr1_4:74683510-74683529 None:intergenic 40.0%
GCCATTGTTGTACAAAACGT+AGG + chr1_4:74683521-74683540 Msa0184980:CDS 40.0%
AGAGACTTGGCCAGAAAATA+TGG + chr1_4:74683656-74683675 Msa0184980:CDS 40.0%
! CATCAAGGGTCCATATTTTC+TGG - chr1_4:74683669-74683688 None:intergenic 40.0%
! CCAAGTTGAAGATGCATCAA+GGG - chr1_4:74683683-74683702 None:intergenic 40.0%
! TCCAAGTTGAAGATGCATCA+AGG - chr1_4:74683684-74683703 None:intergenic 40.0%
AATTCCGAAGCTAGGACTTT+AGG - chr1_4:74683788-74683807 None:intergenic 40.0%
! TTTTATGCTCAAAAGCTCCG+AGG - chr1_4:74683885-74683904 None:intergenic 40.0%
ACTCTTCTTCTCTAATTGGC+TGG - chr1_4:74683922-74683941 None:intergenic 40.0%
ACACCTTGAGTGAGGTTAAT+GGG - chr1_4:74683986-74684005 None:intergenic 40.0%
TACACCTTGAGTGAGGTTAA+TGG - chr1_4:74683987-74684006 None:intergenic 40.0%
GTCTTTACACTTCTTGCCAA+AGG - chr1_4:74684044-74684063 None:intergenic 40.0%
CCGCCGATATAAACTTATCT+TGG - chr1_4:74684066-74684085 None:intergenic 40.0%
!! GAGTTGATAAAGATTGCAGC+AGG + chr1_4:74684091-74684110 Msa0184980:CDS 40.0%
!! TCGACAGGTTGATCAGATAA+TGG + chr1_4:74684195-74684214 Msa0184980:CDS 40.0%
CATCATCAATGAGCACAAAG+AGG + chr1_4:74684222-74684241 Msa0184980:CDS 40.0%
GAGGCTAAACAAGGAATAAC+TGG + chr1_4:74684241-74684260 Msa0184980:CDS 40.0%
CGTAACTTAAGGGACCAAAA+TGG - chr1_4:74684631-74684650 None:intergenic 40.0%
ATCAGCAAGCACCATAGATT+GGG + chr1_4:74684835-74684854 Msa0184980:CDS 40.0%
TTCTACCATTGCCCAATCTA+TGG - chr1_4:74684849-74684868 None:intergenic 40.0%
GGGCAATGGTAGAAATGATA+AGG + chr1_4:74684855-74684874 Msa0184980:CDS 40.0%
CACAGGAATGTGTAGTCTAA+GGG - chr1_4:74684999-74685018 None:intergenic 40.0%
! CACTCTCTTGGTAGTAAAAG+AGG - chr1_4:74685022-74685041 None:intergenic 40.0%
! CTTTTACTACCAAGAGAGTG+TGG + chr1_4:74685022-74685041 Msa0184980:CDS 40.0%
!! ACGACCACCTTAGTCTTAAT+TGG - chr1_4:74685079-74685098 None:intergenic 40.0%
TCAAACCAAATATGCTCCCT+GGG - chr1_4:74685243-74685262 None:intergenic 40.0%
!! TTCTTCGCTTTTGATTCCAC+CGG - chr1_4:74685320-74685339 None:intergenic 40.0%
! GCTTTATTGGCCCTTTAGGA+AGG - chr1_4:74683580-74683599 None:intergenic 45.0%
!! GGTAGCTTTATTGGCCCTTT+AGG - chr1_4:74683584-74683603 None:intergenic 45.0%
CCCTTGATGCATCTTCAACT+TGG + chr1_4:74683680-74683699 Msa0184980:CDS 45.0%
TTTCATCACCTGACTGTGCT+AGG + chr1_4:74683723-74683742 Msa0184980:CDS 45.0%
TTCATCACCTGACTGTGCTA+GGG + chr1_4:74683724-74683743 Msa0184980:CDS 45.0%
AAGGCCTAAAGTCCTAGCTT+CGG + chr1_4:74683781-74683800 Msa0184980:CDS 45.0%
!! TGTCAAATGGATTGCTTCCG+AGG + chr1_4:74683952-74683971 Msa0184980:CDS 45.0%
!! AAATGGATTGCTTCCGAGGA+AGG + chr1_4:74683956-74683975 Msa0184980:CDS 45.0%
! GTTAATGGGTGATCCTTCCT+CGG - chr1_4:74683972-74683991 None:intergenic 45.0%
TCACCCATTAACCTCACTCA+AGG + chr1_4:74683980-74683999 Msa0184980:CDS 45.0%
CTTCTTGCCAAAGGCAGATT+TGG - chr1_4:74684035-74684054 None:intergenic 45.0%
! TTTAAGGCCTACCCTTGAGA+GGG + chr1_4:74684168-74684187 Msa0184980:CDS 45.0%
GAGCACAAAGAGGCTAAACA+AGG + chr1_4:74684232-74684251 Msa0184980:CDS 45.0%
ATGAGAACATCTACCAGGGT+AGG - chr1_4:74684274-74684293 None:intergenic 45.0%
CGAACTTTAACATGAGACGG+AGG - chr1_4:74684436-74684455 None:intergenic 45.0%
!!! GTTCAGGACATTTTTGGTGC+TGG + chr1_4:74684803-74684822 Msa0184980:intron 45.0%
CATCAGCAAGCACCATAGAT+TGG + chr1_4:74684834-74684853 Msa0184980:CDS 45.0%
AAGCACCATAGATTGGGCAA+TGG + chr1_4:74684841-74684860 Msa0184980:CDS 45.0%
GCACAGGAATGTGTAGTCTA+AGG - chr1_4:74685000-74685019 None:intergenic 45.0%
! CTTGGTAGTAAAAGAGGCAC+AGG - chr1_4:74685016-74685035 None:intergenic 45.0%
GGTCAAGCATGTGAGATTCA+TGG + chr1_4:74685043-74685062 Msa0184980:CDS 45.0%
TAAGGTGGTCGTCAATGCAT+GGG + chr1_4:74685087-74685106 Msa0184980:CDS 45.0%
TCGCAAGAGATCCAAACTAC+TGG + chr1_4:74685113-74685132 Msa0184980:CDS 45.0%
! TCTGGTTCAGTCCAGTAGTT+TGG - chr1_4:74685127-74685146 None:intergenic 45.0%
!! GAGTACATTCCTTTTGGTGC+AGG + chr1_4:74685205-74685224 Msa0184980:CDS 45.0%
ATTCTTCGTCCTGCACCAAA+AGG - chr1_4:74685217-74685236 None:intergenic 45.0%
! ATATGCCCAGGGAGCATATT+TGG + chr1_4:74685235-74685254 Msa0184980:CDS 45.0%
CTCAAACCAAATATGCTCCC+TGG - chr1_4:74685244-74685263 None:intergenic 45.0%
!! TCTTCGCTTTTGATTCCACC+GGG - chr1_4:74685319-74685338 None:intergenic 45.0%
TTGGACATGACCGAGGAATT+TGG + chr1_4:74685340-74685359 Msa0184980:CDS 45.0%
! GCTTTATTGGCCCTTTAGGA+AGG - chr1_4:74683580-74683599 None:intergenic 45.0%
!! GGTAGCTTTATTGGCCCTTT+AGG - chr1_4:74683584-74683603 None:intergenic 45.0%
CCCTTGATGCATCTTCAACT+TGG + chr1_4:74683680-74683699 Msa0184980:CDS 45.0%
TTTCATCACCTGACTGTGCT+AGG + chr1_4:74683723-74683742 Msa0184980:CDS 45.0%
TTCATCACCTGACTGTGCTA+GGG + chr1_4:74683724-74683743 Msa0184980:CDS 45.0%
AAGGCCTAAAGTCCTAGCTT+CGG + chr1_4:74683781-74683800 Msa0184980:CDS 45.0%
!! TGTCAAATGGATTGCTTCCG+AGG + chr1_4:74683952-74683971 Msa0184980:CDS 45.0%
!! AAATGGATTGCTTCCGAGGA+AGG + chr1_4:74683956-74683975 Msa0184980:CDS 45.0%
! GTTAATGGGTGATCCTTCCT+CGG - chr1_4:74683972-74683991 None:intergenic 45.0%
TCACCCATTAACCTCACTCA+AGG + chr1_4:74683980-74683999 Msa0184980:CDS 45.0%
CTTCTTGCCAAAGGCAGATT+TGG - chr1_4:74684035-74684054 None:intergenic 45.0%
! TTTAAGGCCTACCCTTGAGA+GGG + chr1_4:74684168-74684187 Msa0184980:CDS 45.0%
GAGCACAAAGAGGCTAAACA+AGG + chr1_4:74684232-74684251 Msa0184980:CDS 45.0%
ATGAGAACATCTACCAGGGT+AGG - chr1_4:74684274-74684293 None:intergenic 45.0%
CGAACTTTAACATGAGACGG+AGG - chr1_4:74684436-74684455 None:intergenic 45.0%
!!! GTTCAGGACATTTTTGGTGC+TGG + chr1_4:74684803-74684822 Msa0184980:intron 45.0%
CATCAGCAAGCACCATAGAT+TGG + chr1_4:74684834-74684853 Msa0184980:CDS 45.0%
AAGCACCATAGATTGGGCAA+TGG + chr1_4:74684841-74684860 Msa0184980:CDS 45.0%
GCACAGGAATGTGTAGTCTA+AGG - chr1_4:74685000-74685019 None:intergenic 45.0%
! CTTGGTAGTAAAAGAGGCAC+AGG - chr1_4:74685016-74685035 None:intergenic 45.0%
GGTCAAGCATGTGAGATTCA+TGG + chr1_4:74685043-74685062 Msa0184980:CDS 45.0%
TAAGGTGGTCGTCAATGCAT+GGG + chr1_4:74685087-74685106 Msa0184980:CDS 45.0%
TCGCAAGAGATCCAAACTAC+TGG + chr1_4:74685113-74685132 Msa0184980:CDS 45.0%
! TCTGGTTCAGTCCAGTAGTT+TGG - chr1_4:74685127-74685146 None:intergenic 45.0%
!! GAGTACATTCCTTTTGGTGC+AGG + chr1_4:74685205-74685224 Msa0184980:CDS 45.0%
ATTCTTCGTCCTGCACCAAA+AGG - chr1_4:74685217-74685236 None:intergenic 45.0%
! ATATGCCCAGGGAGCATATT+TGG + chr1_4:74685235-74685254 Msa0184980:CDS 45.0%
CTCAAACCAAATATGCTCCC+TGG - chr1_4:74685244-74685263 None:intergenic 45.0%
!! TCTTCGCTTTTGATTCCACC+GGG - chr1_4:74685319-74685338 None:intergenic 45.0%
TTGGACATGACCGAGGAATT+TGG + chr1_4:74685340-74685359 Msa0184980:CDS 45.0%
! GTTTAAGGCCTACCCTTGAG+AGG + chr1_4:74684167-74684186 Msa0184980:CDS 50.0%
! AACTGGTTTAAGGCCTACCC+TGG + chr1_4:74684258-74684277 Msa0184980:CDS 50.0%
!!! CAGGACATTTTTGGTGCTGG+AGG + chr1_4:74684806-74684825 Msa0184980:intron 50.0%
AGCACAAGATGAGGTGAGAG+AGG + chr1_4:74684898-74684917 Msa0184980:CDS 50.0%
CATGCTTGACCACACTCTCT+TGG - chr1_4:74685034-74685053 None:intergenic 50.0%
CTAAGGTGGTCGTCAATGCA+TGG + chr1_4:74685086-74685105 Msa0184980:CDS 50.0%
GCGTTTCCCATGAATCTCTC+TGG - chr1_4:74685160-74685179 None:intergenic 50.0%
CAGGACGAAGAATATGCCCA+GGG + chr1_4:74685224-74685243 Msa0184980:CDS 50.0%
TTTGATTGGAAGCTTCCCGG+TGG + chr1_4:74685301-74685320 Msa0184980:CDS 50.0%
CGAAGAATTGGACATGACCG+AGG + chr1_4:74685333-74685352 Msa0184980:CDS 50.0%
CACTGCGACTCCAAATTCCT+CGG - chr1_4:74685353-74685372 None:intergenic 50.0%
! GTTTAAGGCCTACCCTTGAG+AGG + chr1_4:74684167-74684186 Msa0184980:CDS 50.0%
! AACTGGTTTAAGGCCTACCC+TGG + chr1_4:74684258-74684277 Msa0184980:CDS 50.0%
!!! CAGGACATTTTTGGTGCTGG+AGG + chr1_4:74684806-74684825 Msa0184980:intron 50.0%
AGCACAAGATGAGGTGAGAG+AGG + chr1_4:74684898-74684917 Msa0184980:CDS 50.0%
CATGCTTGACCACACTCTCT+TGG - chr1_4:74685034-74685053 None:intergenic 50.0%
CTAAGGTGGTCGTCAATGCA+TGG + chr1_4:74685086-74685105 Msa0184980:CDS 50.0%
GCGTTTCCCATGAATCTCTC+TGG - chr1_4:74685160-74685179 None:intergenic 50.0%
CAGGACGAAGAATATGCCCA+GGG + chr1_4:74685224-74685243 Msa0184980:CDS 50.0%
TTTGATTGGAAGCTTCCCGG+TGG + chr1_4:74685301-74685320 Msa0184980:CDS 50.0%
CGAAGAATTGGACATGACCG+AGG + chr1_4:74685333-74685352 Msa0184980:CDS 50.0%
CACTGCGACTCCAAATTCCT+CGG - chr1_4:74685353-74685372 None:intergenic 50.0%
ATCACCTGACTGTGCTAGGG+AGG + chr1_4:74683727-74683746 Msa0184980:CDS 55.0%
ATCACCTCCCTAGCACAGTC+AGG - chr1_4:74683734-74683753 None:intergenic 55.0%
CTGTCGATGCACCCTCTCAA+GGG - chr1_4:74684182-74684201 None:intergenic 55.0%
GCAGGACGAAGAATATGCCC+AGG + chr1_4:74685223-74685242 Msa0184980:CDS 55.0%
ATCACCTGACTGTGCTAGGG+AGG + chr1_4:74683727-74683746 Msa0184980:CDS 55.0%
ATCACCTCCCTAGCACAGTC+AGG - chr1_4:74683734-74683753 None:intergenic 55.0%
CTGTCGATGCACCCTCTCAA+GGG - chr1_4:74684182-74684201 None:intergenic 55.0%
GCAGGACGAAGAATATGCCC+AGG + chr1_4:74685223-74685242 Msa0184980:CDS 55.0%
CGATGCACCCTCTCAAGGGT+AGG - chr1_4:74684178-74684197 None:intergenic 60.0%
CCTGTCGATGCACCCTCTCA+AGG - chr1_4:74684183-74684202 None:intergenic 60.0%
! CCTTGAGAGGGTGCATCGAC+AGG + chr1_4:74684180-74684199 Msa0184980:CDS 60.0%
CGATGCACCCTCTCAAGGGT+AGG - chr1_4:74684178-74684197 None:intergenic 60.0%
CCTGTCGATGCACCCTCTCA+AGG - chr1_4:74684183-74684202 None:intergenic 60.0%
! CCTTGAGAGGGTGCATCGAC+AGG + chr1_4:74684180-74684199 Msa0184980:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 74683470 74685432 74683470 ID=Msa0184980;Name=Msa0184980
chr1_4 mRNA 74683470 74685432 74683470 ID=Msa0184980-mRNA-1;Parent=Msa0184980;Name=Msa0184980-mRNA-1;_AED=0.95;_eAED=0.95;_QI=0|0|0|0.5|1|1|2|0|540
chr1_4 exon 74683470 74684468 74683470 ID=Msa0184980-mRNA-1:exon:25487;Parent=Msa0184980-mRNA-1
chr1_4 exon 74684809 74685432 74684809 ID=Msa0184980-mRNA-1:exon:25488;Parent=Msa0184980-mRNA-1
chr1_4 CDS 74683470 74684468 74683470 ID=Msa0184980-mRNA-1:cds;Parent=Msa0184980-mRNA-1
chr1_4 CDS 74684809 74685432 74684809 ID=Msa0184980-mRNA-1:cds;Parent=Msa0184980-mRNA-1
Gene Sequence

>Msa0184980

ATGGCTCTACTAGTCCTCTACTTGTCATATCTTTTCTCCTTTGTCCTCTTAGCCATTGTTGTACAAAACGTAGGAAAGAAGCTCAAGAAATCATACTCAACTTATAACCTTCCTAAAGGGCCAATAAAGCTACCAATTATAGGAAATTTACACAATCTGTTAAGTTCTCAACCACATAAAAAACTAAGAGACTTGGCCAGAAAATATGGACCCTTGATGCATCTTCAACTTGGAGAGATTTCTACTGTTGTAATTTCATCACCTGACTGTGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTAAAGTCCTAGCTTCGGAATTAATTTCTTATAATTCCACAGGTATAATTTCATCTCCTTATGGTAATTATTGGAGACAGCTACGAAAAATTTGTTCCTCGGAGCTTTTGAGCATAAAACGCGTTAACTCATACCAGCCAATTAGAGAAGAAGAGTTCTCCAATATTGTCAAATGGATTGCTTCCGAGGAAGGATCACCCATTAACCTCACTCAAGGTGTAATTTCTTCAATATACACTATTCTTTCCAAATCTGCCTTTGGCAAGAAGTGTAAAGACCAAGATAAGTTTATATCGGCGGTAAAAGAGTTGATAAAGATTGCAGCAGGTTTTGACTTAGCAGAGTTGTTTCCTTCTATTACATGGATGCATTATTTCACTGGTTTAAGGCCTACCCTTGAGAGGGTGCATCGACAGGTTGATCAGATAATGGAAAACATCATCAATGAGCACAAAGAGGCTAAACAAGGAATAACTGGTTTAAGGCCTACCCTGGTAGATGTTCTCATAAAATATGAAGACGGAAACAACAAGGAATTTTTTCTAACTAAAGACAATATCAAGGCTATAATTCTGGTAAGAATAATAACTCTTCCAAATATAACAGATTCCCTTGAATATCTTTTAAGTGGAAGATTTGAAATACTTCCTCCGTCTCATGTTAAAGTTCGTCTTGGAAATATTGACATTTTTGGTGCTGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAAAGTTATGAAGAAAGCACAAGATGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGACGAAAGTTGCATCAACGAGCTCCATTATTTGAAATCAGTCGTCAAAGAAACCCTTAGACTACACATTCCTGTGCCTCTTTTACTACCAAGAGAGTGTGGTCAAGCATGTGAGATTCATGGTTATCACATACCAATTAAGACTAAGGTGGTCGTCAATGCATGGGCAATCGCAAGAGATCCAAACTACTGGACTGAACCAGAGAAATTTTATCCAGAGAGATTCATGGGAAACGCTATTGACTATAAAGGGACTGATTTTGAGTACATTCCTTTTGGTGCAGGACGAAGAATATGCCCAGGGAGCATATTTGGTTTGAGAAATGTTGAGTTAACCCTTGCAACATTGTTATTCTATTTTGATTGGAAGCTTCCCGGTGGAATCAAAAGCGAAGAATTGGACATGACCGAGGAATTTGGAGTCGCAGTGAGAAGAAAAGATGATCTTTTATTGTTGCCTTTTGTTTATCATCCTTTGCCTGTCATGTGA
Protein sequence

>Msa0184980

MALLVLYLSYLFSFVLLAIVVQNVGKKLKKSYSTYNLPKGPIKLPIIGNLHNLLSSQPHKKLRDLARKYGPLMHLQLGEISTVVISSPDCAREVMKTHDINFAIRPKVLASELISYNSTGIISSPYGNYWRQLRKICSSELLSIKRVNSYQPIREEEFSNIVKWIASEEGSPINLTQGVISSIYTILSKSAFGKKCKDQDKFISAVKELIKIAAGFDLAELFPSITWMHYFTGLRPTLERVHRQVDQIMENIINEHKEAKQGITGLRPTLVDVLIKYEDGNNKEFFLTKDNIKAIILVRIITLPNITDSLEYLLSGRFEILPPSHVKVRLGNIDIFGAGGETSASTIDWAMVEMIRDPKVMKKAQDEVREVFKMKGRVDESCINELHYLKSVVKETLRLHIPVPLLLPRECGQACEIHGYHIPIKTKVVVNAWAIARDPNYWTEPEKFYPERFMGNAIDYKGTDFEYIPFGAGRRICPGSIFGLRNVELTLATLLFYFDWKLPGGIKSEELDMTEEFGVAVRRKDDLLLLPFVYHPLPVM*