AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0362740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362740 MtrunA17_Chr3g0101811 85.662 544 56 2 1 544 1 522 0.0 956
Msa0362740 MtrunA17_Chr3g0101731 76.243 543 92 2 1 543 1 506 0.0 855
Msa0362740 MtrunA17_Chr3g0101831 78.085 543 83 1 1 543 1 507 0.0 847
Msa0362740 MtrunA17_Chr3g0101721 72.420 533 110 2 12 543 12 508 0.0 803
Msa0362740 MtrunA17_Chr3g0101761 71.771 542 114 3 1 541 1 504 0.0 793
Msa0362740 MtrunA17_Chr3g0101821 69.926 542 124 3 1 541 1 504 0.0 771
Msa0362740 MtrunA17_Chr3g0101801 69.048 546 130 3 1 545 8 515 0.0 770
Msa0362740 MtrunA17_Chr3g0101751 68.257 545 134 3 1 544 8 514 0.0 763
Msa0362740 MtrunA17_Chr8g0357431 69.871 541 127 1 1 541 1 505 0.0 753
Msa0362740 MtrunA17_Chr8g0357421 68.946 541 131 2 1 541 1 504 0.0 739
Msa0362740 MtrunA17_Chr3g0101741 67.941 471 108 3 73 543 1 428 0.0 662
Msa0362740 MtrunA17_Chr1g0162801 60.894 537 169 4 8 542 8 505 0.0 641
Msa0362740 MtrunA17_Chr1g0162811 58.333 540 181 6 5 542 5 502 0.0 634
Msa0362740 MtrunA17_Chr3g0101711 55.249 543 205 2 1 541 1 507 0.0 629
Msa0362740 MtrunA17_Chr1g0167321 60.000 535 173 4 11 543 8 503 0.0 618
Msa0362740 MtrunA17_Chr3g0101671 55.678 546 203 4 1 543 1 510 0.0 614
Msa0362740 MtrunA17_Chr3g0101661 55.455 550 201 5 1 545 1 511 0.0 614
Msa0362740 MtrunA17_Chr3g0101651 54.494 534 204 3 11 541 11 508 0.0 611
Msa0362740 MtrunA17_Chr3g0101701 55.638 541 201 3 1 538 1 505 0.0 610
Msa0362740 MtrunA17_Chr4g0020041 55.263 532 198 4 6 535 6 499 0.0 610
Msa0362740 MtrunA17_Chr3g0101691 53.420 541 213 3 1 538 1 505 0.0 610
Msa0362740 MtrunA17_Chr3g0101631 54.059 542 203 5 1 540 1 498 0.0 608
Msa0362740 MtrunA17_Chr3g0101601 54.696 543 199 6 1 540 1 499 0.0 606
Msa0362740 MtrunA17_Chr3g0101621 54.797 542 194 7 1 540 1 493 0.0 595
Msa0362740 MtrunA17_Chr8g0361471 52.564 546 218 4 1 544 1 507 0.0 569
Msa0362740 MtrunA17_Chr6g0466331 52.495 541 216 4 1 539 1 502 0.0 566
Msa0362740 MtrunA17_Chr6g0465511 52.495 541 216 4 1 539 1 502 0.0 563
Msa0362740 MtrunA17_Chr3g0101611 51.731 520 209 4 26 542 27 507 0.0 544
Msa0362740 MtrunA17_Chr3g0101571 49.533 535 230 4 6 540 7 501 0.0 538
Msa0362740 MtrunA17_Chr3g0101581 47.770 538 235 6 6 539 8 503 0.0 527
Msa0362740 MtrunA17_Chr5g0431641 48.689 534 226 5 9 540 15 502 1.08e-180 521
Msa0362740 MtrunA17_Chr5g0403351 48.037 535 238 4 8 538 5 503 1.94e-180 521
Msa0362740 MtrunA17_Chr5g0446161 48.059 541 231 6 6 540 6 502 2.48e-179 518
Msa0362740 MtrunA17_Chr5g0445531 49.416 514 218 3 28 540 29 501 1.74e-177 513
Msa0362740 MtrunA17_Chr5g0445451 48.689 534 226 5 4 535 10 497 3.62e-176 509
Msa0362740 MtrunA17_Chr5g0445441 48.315 534 228 5 4 535 51 538 8.35e-174 505
Msa0362740 MtrunA17_Chr5g0431671 47.554 511 224 4 33 540 34 503 1.72e-173 503
Msa0362740 MtrunA17_Chr5g0445381 48.387 527 229 4 11 535 43 528 5.23e-173 503
Msa0362740 MtrunA17_Chr6g0463801 48.462 520 227 3 24 543 24 502 5.20e-172 499
Msa0362740 MtrunA17_Chr4g0024771 47.191 534 234 5 9 540 15 502 2.00e-171 498
Msa0362740 MtrunA17_Chr2g0280261 49.520 521 222 2 23 543 20 499 6.23e-170 494
Msa0362740 MtrunA17_Chr5g0445461 47.495 539 235 5 4 540 10 502 1.03e-169 493
Msa0362740 MtrunA17_Chr4g0076161 46.704 531 233 8 13 535 12 500 2.13e-169 493
Msa0362740 MtrunA17_Chr5g0403321 46.833 521 234 4 25 538 22 506 1.22e-168 491
Msa0362740 MtrunA17_Chr5g0446151 46.857 525 228 7 23 540 23 503 3.05e-168 489
Msa0362740 MtrunA17_Chr5g0445421 46.816 534 215 6 4 535 84 550 8.03e-167 488
Msa0362740 MtrunA17_Chr5g0403331 45.866 508 235 4 35 538 33 504 5.53e-164 479
Msa0362740 MtrunA17_Chr6g0463791 45.810 537 235 8 9 538 12 499 2.29e-162 474
Msa0362740 MtrunA17_Chr3g0116681 40.596 537 267 6 10 539 15 506 3.02e-140 418
Msa0362740 MtrunA17_Chr4g0047661 38.776 539 285 5 5 538 19 517 3.41e-126 382
Msa0362740 MtrunA17_Chr1g0156101 37.905 525 273 6 27 535 22 509 1.93e-123 375
Msa0362740 MtrunA17_Chr3g0116741 36.514 545 288 7 2 539 24 517 3.60e-123 375
Msa0362740 MtrunA17_Chr2g0310391 37.624 505 267 6 37 535 28 490 2.03e-120 367
Msa0362740 MtrunA17_Chr4g0058231 37.546 538 281 7 4 532 1 492 2.45e-120 367
Msa0362740 MtrunA17_Chr4g0047631 37.695 512 279 5 28 538 40 512 1.84e-119 365
Msa0362740 MtrunA17_Chr4g0047691 39.484 504 265 5 36 538 51 515 2.37e-119 365
Msa0362740 MtrunA17_Chr4g0058261 38.536 519 269 8 30 538 55 533 2.52e-118 362
Msa0362740 MtrunA17_Chr5g0430031 36.697 545 282 9 1 535 10 501 1.28e-117 360
Msa0362740 MtrunA17_Chr2g0310381 37.822 505 266 6 37 535 28 490 1.76e-117 359
Msa0362740 MtrunA17_Chr4g0058191 36.481 540 286 9 4 538 1 488 1.02e-116 357
Msa0362740 MtrunA17_Chr4g0047641 36.989 538 298 5 4 538 17 516 2.68e-116 357
Msa0362740 MtrunA17_Chr4g0058281 38.015 534 283 11 11 538 23 514 4.20e-116 356
Msa0362740 MtrunA17_Chr6g0472311 37.662 539 284 8 9 532 10 511 5.67e-115 353
Msa0362740 MtrunA17_Chr1g0156081 38.208 547 282 7 5 535 27 533 8.32e-115 353
Msa0362740 MtrunA17_Chr4g0035921 38.641 515 257 10 38 535 38 510 1.43e-114 352
Msa0362740 MtrunA17_Chr4g0011961 37.361 538 283 6 3 534 2 491 2.41e-114 351
Msa0362740 MtrunA17_Chr4g0058201 36.935 509 275 7 31 534 22 489 3.31e-113 348
Msa0362740 MtrunA17_Chr5g0431591 46.761 355 146 3 185 537 4 317 1.21e-112 340
Msa0362740 MtrunA17_Chr4g0011921 37.148 533 287 5 8 534 2 492 4.10e-112 345
Msa0362740 MtrunA17_Chr5g0430131 37.500 544 280 10 2 535 7 500 5.57e-112 345
Msa0362740 MtrunA17_Chr5g0430081 36.581 544 286 9 2 535 5 499 7.43e-112 345
Msa0362740 MtrunA17_Chr8g0382901 36.978 503 270 6 37 535 492 951 7.04e-111 355
Msa0362740 MtrunA17_Chr8g0382901 36.327 501 261 7 37 535 28 472 7.90e-105 339
Msa0362740 MtrunA17_Chr5g0405001 35.120 541 291 10 7 535 18 510 1.87e-110 342
Msa0362740 MtrunA17_Chr5g0419691 36.853 502 271 4 38 533 30 491 1.10e-109 339
Msa0362740 MtrunA17_Chr4g0011981 36.779 503 272 4 38 534 30 492 1.28e-109 339
Msa0362740 MtrunA17_Chr5g0430101 36.431 538 289 9 4 535 8 498 1.69e-109 339
Msa0362740 MtrunA17_Chr6g0484841 38.160 511 256 12 38 535 38 501 2.84e-109 338
Msa0362740 MtrunA17_Chr5g0430091 36.784 541 279 10 7 535 12 501 7.82e-109 337
Msa0362740 MtrunA17_Chr4g0011901 36.257 513 281 4 28 534 20 492 7.49e-108 334
Msa0362740 MtrunA17_Chr8g0390881 33.761 545 305 10 1 535 3 501 2.12e-107 333
Msa0362740 MtrunA17_Chr5g0431511 35.050 505 282 5 37 534 33 498 2.48e-107 333
Msa0362740 MtrunA17_Chr4g0011871 36.382 503 273 4 38 533 30 492 5.07e-107 332
Msa0362740 MtrunA17_Chr7g0218611 35.088 513 285 6 28 534 26 496 2.35e-106 330
Msa0362740 MtrunA17_Chr7g0218601 34.834 511 285 6 30 534 27 495 2.60e-106 330
Msa0362740 MtrunA17_Chr6g0484811 35.630 508 274 9 38 535 38 502 1.63e-105 328
Msa0362740 MtrunA17_Chr3g0086691 34.775 555 289 11 12 546 8 509 3.97e-105 328
Msa0362740 MtrunA17_Chr8g0344181 35.317 504 273 7 35 528 36 496 2.76e-104 325
Msa0362740 MtrunA17_Chr8g0344151 34.921 504 275 6 35 528 34 494 2.81e-103 323
Msa0362740 MtrunA17_Chr5g0431501 35.644 505 279 5 37 534 33 498 6.24e-103 322
Msa0362740 MtrunA17_Chr5g0431461 35.644 505 279 5 37 534 33 498 6.24e-103 322
Msa0362740 MtrunA17_Chr3g0086661 35.116 561 294 11 4 546 1 509 6.96e-103 322
Msa0362740 MtrunA17_Chr8g0372251 36.471 510 269 9 38 535 36 502 1.30e-102 321
Msa0362740 MtrunA17_Chr5g0406651 37.698 504 268 4 37 534 30 493 6.54e-102 319
Msa0362740 MtrunA17_Chr1g0156061 37.182 511 231 5 27 536 45 466 1.35e-101 317
Msa0362740 MtrunA17_Chr3g0086651 34.759 561 296 11 4 546 1 509 1.75e-101 318
Msa0362740 MtrunA17_Chr4g0061381 34.496 516 274 7 46 546 40 506 2.16e-101 318
Msa0362740 MtrunA17_Chr4g0011881 36.779 503 271 5 38 534 31 492 1.91e-99 312
Msa0362740 MtrunA17_Chr1g0174451 32.176 547 314 10 1 535 1 502 2.06e-97 308
Msa0362740 MtrunA17_Chr5g0446101 42.697 356 160 5 184 539 3 314 3.24e-97 300
Msa0362740 MtrunA17_Chr1g0205361 33.520 537 306 9 7 536 3 495 6.74e-97 306
Msa0362740 MtrunA17_Chr3g0094171 32.103 542 306 11 3 528 2 497 3.85e-96 304
Msa0362740 MtrunA17_Chr7g0258221 33.761 545 304 10 4 535 1 501 4.30e-96 304
Msa0362740 MtrunA17_Chr3g0094231 34.190 506 273 11 33 527 32 488 1.73e-95 302
Msa0362740 MtrunA17_Chr1g0160851 33.457 541 299 9 3 536 9 495 2.71e-95 301
Msa0362740 MtrunA17_Chr1g0174471 32.784 546 312 11 1 535 16 517 9.90e-95 301
Msa0362740 MtrunA17_Chr8g0344191 32.392 531 305 8 7 528 43 528 1.20e-94 301
Msa0362740 MtrunA17_Chr3g0084921 34.249 546 299 11 4 535 8 507 9.01e-94 298
Msa0362740 MtrunA17_Chr7g0235551 33.752 557 301 13 4 546 8 510 1.67e-93 297
Msa0362740 MtrunA17_Chr7g0265611 33.525 522 293 10 26 535 35 514 3.95e-93 296
Msa0362740 MtrunA17_Chr1g0174481 31.227 538 314 11 7 535 6 496 1.05e-92 295
Msa0362740 MtrunA17_Chr4g0057001 33.981 515 284 9 30 535 43 510 6.51e-92 293
Msa0362740 MtrunA17_Chr3g0101591 60.680 206 81 0 334 539 34 239 8.53e-92 283
Msa0362740 MtrunA17_Chr5g0395321 31.402 535 313 11 7 535 9 495 1.04e-91 293
Msa0362740 MtrunA17_Chr8g0362701 33.333 549 304 12 1 535 1 501 3.77e-91 291
Msa0362740 MtrunA17_Chr7g0246221 30.827 532 315 8 4 527 6 492 4.11e-91 291
Msa0362740 MtrunA17_Chr1g0174461 30.474 548 321 12 1 535 1 501 1.45e-90 290
Msa0362740 MtrunA17_Chr1g0174441 30.576 556 328 13 1 542 20 531 4.35e-89 286
Msa0362740 MtrunA17_Chr5g0395331 30.814 516 304 8 30 535 30 502 5.88e-88 283
Msa0362740 MtrunA17_Chr5g0430111 35.853 463 238 9 7 459 12 425 5.31e-87 278
Msa0362740 MtrunA17_Chr5g0445751 44.795 317 160 5 7 319 11 316 8.34e-87 273
Msa0362740 MtrunA17_Chr8g0362481 33.753 477 257 10 73 535 1 432 4.81e-86 276
Msa0362740 MtrunA17_Chr1g0200961 32.495 517 296 9 36 544 27 498 1.71e-85 276
Msa0362740 MtrunA17_Chr5g0401681 32.200 559 297 14 3 543 1 495 2.05e-85 276
Msa0362740 MtrunA17_Chr4g0056951 33.198 494 276 8 52 535 56 505 2.85e-85 276
Msa0362740 MtrunA17_Chr7g0258211 33.094 556 299 13 10 546 11 512 3.72e-85 276
Msa0362740 MtrunA17_Chr5g0395381 30.451 532 295 11 8 535 10 470 5.13e-84 271
Msa0362740 MtrunA17_Chr1g0176831 30.934 514 298 10 2 509 36 498 1.60e-83 271
Msa0362740 MtrunA17_Chr1g0213671 32.364 550 297 11 14 542 16 511 1.82e-83 271
Msa0362740 MtrunA17_Chr1g0205371 33.725 510 282 9 35 535 33 495 2.12e-83 271
Msa0362740 MtrunA17_Chr8g0356001 31.685 546 313 11 2 536 8 504 2.21e-83 271
Msa0362740 MtrunA17_Chr6g0451751 32.164 513 282 12 45 534 49 518 3.46e-83 271
Msa0362740 MtrunA17_Chr7g0246121 32.836 536 292 12 8 527 6 489 3.90e-83 270
Msa0362740 MtrunA17_Chr1g0164211 31.423 506 295 10 37 535 31 491 1.18e-82 268
Msa0362740 MtrunA17_Chr4g0053621 33.333 543 275 13 8 525 1 481 1.03e-81 266
Msa0362740 MtrunA17_Chr7g0255531 29.213 534 311 9 4 523 1 481 1.24e-81 266
Msa0362740 MtrunA17_Chr5g0401691 31.073 531 292 12 4 523 25 492 2.07e-80 263
Msa0362740 MtrunA17_Chr4g0039901 31.373 510 283 7 33 527 31 488 5.64e-80 261
Msa0362740 MtrunA17_Chr4g0030701 29.664 536 311 11 38 553 36 525 3.67e-79 260
Msa0362740 MtrunA17_Chr2g0314731 30.250 519 297 12 1 509 5 468 1.20e-78 258
Msa0362740 MtrunA17_Chr6g0451691 31.395 516 286 11 45 534 49 522 1.42e-78 259
Msa0362740 MtrunA17_Chr8g0355961 31.978 541 308 10 6 535 12 503 1.59e-78 258
Msa0362740 MtrunA17_Chr7g0246151 31.801 544 301 12 4 531 6 495 2.16e-78 258
Msa0362740 MtrunA17_Chr7g0246131 32.015 531 309 10 4 526 6 492 2.35e-78 258
Msa0362740 MtrunA17_Chr8g0351801 30.948 517 290 10 47 538 44 518 3.16e-78 258
Msa0362740 MtrunA17_Chr7g0254641 31.621 506 290 11 36 525 36 501 3.29e-78 258
Msa0362740 MtrunA17_Chr2g0314721 31.622 487 274 10 34 509 41 479 6.49e-78 256
Msa0362740 MtrunA17_Chr6g0463621 56.863 204 83 3 339 538 1 203 7.17e-78 246
Msa0362740 MtrunA17_Chr4g0052861 31.054 541 294 13 1 527 4 479 1.27e-77 255
Msa0362740 MtrunA17_Chr7g0224551 28.495 558 323 14 1 535 1 505 1.72e-77 256
Msa0362740 MtrunA17_Chr1g0207841 30.178 507 296 10 48 535 49 516 5.22e-77 254
Msa0362740 MtrunA17_Chr4g0046321 29.057 530 311 13 30 537 25 511 7.50e-77 254
Msa0362740 MtrunA17_Chr6g0451781 31.827 531 293 11 30 534 64 551 1.06e-76 255
Msa0362740 MtrunA17_Chr7g0224561 28.980 559 319 14 1 535 1 505 2.67e-76 253
Msa0362740 MtrunA17_Chr6g0451741 30.680 515 290 10 45 534 68 540 2.81e-75 251
Msa0362740 MtrunA17_Chr4g0046351 28.922 529 311 12 30 536 25 510 5.20e-75 249
Msa0362740 MtrunA17_Chr4g0030711 30.037 536 311 12 23 535 23 517 6.07e-75 249
Msa0362740 MtrunA17_Chr3g0082701 31.395 516 285 12 45 534 47 519 1.56e-74 248
Msa0362740 MtrunA17_Chr4g0046331 28.285 548 326 13 13 536 8 512 2.18e-74 248
Msa0362740 MtrunA17_Chr4g0008101 31.068 515 287 10 45 534 47 518 4.26e-74 247
Msa0362740 MtrunA17_Chr4g0052851 31.337 501 282 11 36 531 32 475 1.10e-73 245
Msa0362740 MtrunA17_Chr6g0451641 31.522 552 302 16 3 534 16 511 1.64e-73 245
Msa0362740 MtrunA17_Chr6g0463611 40.404 297 166 5 13 306 26 314 1.79e-72 236
Msa0362740 MtrunA17_Chr8g0339331 29.862 509 288 11 38 525 40 500 5.46e-72 241
Msa0362740 MtrunA17_Chr4g0052881 31.284 553 301 12 8 545 7 495 5.53e-72 240
Msa0362740 MtrunA17_Chr6g0458561 29.725 545 307 13 6 525 20 513 7.58e-72 241
Msa0362740 MtrunA17_Chr8g0339311 30.769 533 302 14 27 535 31 520 8.52e-72 241
Msa0362740 MtrunA17_Chr5g0445371 42.953 298 97 5 238 534 1 226 3.01e-71 230
Msa0362740 MtrunA17_Chr7g0246181 30.093 535 314 10 4 527 6 491 4.71e-71 238
Msa0362740 MtrunA17_Chr6g0466941 30.057 529 305 11 11 518 12 496 5.93e-71 238
Msa0362740 MtrunA17_Chr1g0197891 29.240 513 314 9 14 521 10 478 2.57e-69 233
Msa0362740 MtrunA17_Chr5g0445761 57.971 207 86 1 339 544 1 207 3.90e-69 223
Msa0362740 MtrunA17_Chr5g0445351 63.636 165 60 0 367 531 52 216 4.19e-69 223
Msa0362740 MtrunA17_Chr1g0197881 28.516 519 323 8 7 521 3 477 8.77e-69 231
Msa0362740 MtrunA17_Chr4g0039391 30.250 519 301 11 28 534 26 495 1.18e-68 232
Msa0362740 MtrunA17_Chr1g0197851 28.654 520 322 9 7 521 3 478 3.22e-68 230
Msa0362740 MtrunA17_Chr2g0304871 29.577 497 290 9 45 524 46 499 7.48e-68 230
Msa0362740 MtrunA17_Chr1g0197871 28.958 518 301 10 14 517 10 474 1.74e-67 228
Msa0362740 MtrunA17_Chr5g0430071 35.457 361 182 6 183 535 37 354 8.38e-67 223
Msa0362740 MtrunA17_Chr4g0011941 48.731 197 101 0 339 535 1 197 7.66e-66 214
Msa0362740 MtrunA17_Chr6g0466901 29.323 532 306 12 8 518 13 495 1.78e-65 224
Msa0362740 MtrunA17_Chr4g0046631 29.193 483 281 9 38 503 47 485 1.02e-64 222
Msa0362740 MtrunA17_Chr4g0011851 47.087 206 109 0 328 533 5 210 2.08e-64 211
Msa0362740 MtrunA17_Chr2g0296651 28.839 534 304 10 1 520 1 472 4.45e-64 219
Msa0362740 MtrunA17_Chr4g0058211 47.716 197 101 1 338 534 18 212 6.20e-64 210
Msa0362740 MtrunA17_Chr4g0017411 29.857 489 280 12 36 519 29 459 6.30e-64 219
Msa0362740 MtrunA17_Chr1g0160861 33.333 366 194 5 171 536 21 336 3.48e-62 209
Msa0362740 MtrunA17_Chr2g0310351 47.208 197 104 0 339 535 1 197 2.60e-61 202
Msa0362740 MtrunA17_Chr3g0101541 63.971 136 49 0 387 522 1 136 1.13e-59 196
Msa0362740 MtrunA17_Chr5g0445361 62.879 132 49 0 409 540 8 139 3.73e-57 189
Msa0362740 MtrunA17_Chr1g0200951 29.216 510 293 14 39 531 63 521 1.31e-56 200
Msa0362740 MtrunA17_Chr8g0390871 44.279 201 110 2 336 535 24 223 3.17e-56 190
Msa0362740 MtrunA17_Chr1g0210091 27.006 511 307 13 46 537 74 537 3.76e-56 199
Msa0362740 MtrunA17_Chr4g0076171 50.526 190 67 4 355 538 1 169 1.72e-54 183
Msa0362740 MtrunA17_Chr5g0432751 25.692 506 309 10 35 522 31 487 2.00e-54 193
Msa0362740 MtrunA17_Chr5g0419451 29.046 482 273 15 39 504 58 486 1.01e-53 192
Msa0362740 MtrunA17_Chr3g0107541 27.273 506 291 14 46 525 59 513 1.85e-50 183
Msa0362740 MtrunA17_Chr2g0296661 27.530 494 286 12 49 525 44 482 3.01e-50 182
Msa0362740 MtrunA17_Chr1g0174421 31.949 313 202 5 1 307 13 320 1.30e-49 176
Msa0362740 MtrunA17_Chr5g0445411 53.289 152 70 1 13 163 21 172 7.61e-49 168
Msa0362740 MtrunA17_Chr8g0377341 27.869 549 311 17 6 531 32 518 1.10e-47 175
Msa0362740 MtrunA17_Chr8g0346261 28.423 482 273 15 40 504 87 513 2.40e-47 175
Msa0362740 MtrunA17_Chr5g0423621 40.331 181 106 1 355 535 1 179 3.45e-47 164
Msa0362740 MtrunA17_Chr3g0107611 26.022 538 320 14 6 515 23 510 3.68e-47 174
Msa0362740 MtrunA17_Chr1g0174431 39.706 204 114 3 339 535 1 202 6.14e-46 162
Msa0362740 MtrunA17_Chr2g0314781 45.161 155 85 0 355 509 1 155 1.99e-45 159
Msa0362740 MtrunA17_Chr8g0370641 24.771 545 334 12 11 528 14 509 7.68e-45 167
Msa0362740 MtrunA17_Chr3g0086681 46.951 164 78 2 387 546 13 171 1.13e-44 157
Msa0362740 MtrunA17_Chr8g0370651 25.626 519 310 12 37 528 44 513 1.21e-44 167
Msa0362740 MtrunA17_Chr6g0451811 40.000 200 115 2 337 534 3 199 7.16e-44 156
Msa0362740 MtrunA17_Chr5g0431631 55.000 140 57 2 9 147 27 161 8.05e-44 154
Msa0362740 MtrunA17_Chr4g0011931 33.223 301 189 4 8 302 2 296 1.42e-43 158
Msa0362740 MtrunA17_Chr1g0198191 24.951 513 326 14 7 504 15 483 2.16e-43 163
Msa0362740 MtrunA17_Chr4g0074581 28.544 515 316 17 29 531 61 535 4.20e-43 162
Msa0362740 MtrunA17_Chr4g0046681 38.974 195 114 2 339 531 31 222 4.90e-43 154
Msa0362740 MtrunA17_Chr5g0430041 47.468 158 82 1 365 521 1 158 6.52e-43 152
Msa0362740 MtrunA17_Chr4g0011861 33.088 272 171 3 38 302 30 297 1.53e-42 155
Msa0362740 MtrunA17_Chr3g0117301 52.137 117 56 0 390 506 1 117 3.22e-42 148
Msa0362740 MtrunA17_Chr2g0280071 26.772 508 318 12 33 526 59 526 4.15e-42 162
Msa0362740 MtrunA17_Chr2g0280081 26.598 485 296 12 56 525 51 490 5.48e-42 163
Msa0362740 MtrunA17_Chr2g0280081 27.386 482 288 13 62 526 558 994 8.64e-42 162
Msa0362740 MtrunA17_Chr2g0280121 25.926 486 306 12 55 526 54 499 7.89e-42 158
Msa0362740 MtrunA17_Chr6g0451771 41.327 196 109 3 342 534 24 216 5.42e-41 149
Msa0362740 MtrunA17_Chr5g0430151 41.398 186 101 2 365 549 1 179 1.13e-40 146
Msa0362740 MtrunA17_Chr2g0280041 26.230 488 300 14 55 526 82 525 3.07e-40 154
Msa0362740 MtrunA17_Chr5g0430171 39.648 227 126 4 7 231 12 229 1.46e-39 145
Msa0362740 MtrunA17_Chr5g0413911 25.882 510 335 15 36 531 41 521 1.57e-39 152
Msa0362740 MtrunA17_Chr6g0451681 32.482 274 171 5 251 519 192 456 2.85e-39 150
Msa0362740 MtrunA17_Chr6g0451681 37.654 162 91 2 27 178 51 212 9.86e-23 102
Msa0362740 MtrunA17_Chr4g0028321 50.769 130 63 1 407 535 25 154 6.44e-39 140
Msa0362740 MtrunA17_Chr8g0364651 25.665 526 330 14 14 526 11 488 7.33e-39 150
Msa0362740 MtrunA17_Chr2g0334021 22.587 518 329 9 34 533 30 493 3.26e-38 148
Msa0362740 MtrunA17_Chr8g0387101 26.694 487 286 14 62 526 59 496 3.67e-38 148
Msa0362740 MtrunA17_Chr5g0402981 40.449 178 100 3 350 524 3 177 4.14e-38 140
Msa0362740 MtrunA17_Chr5g0409051 25.885 537 342 16 10 531 6 501 2.39e-37 145
Msa0362740 MtrunA17_Chr3g0116731 46.000 150 64 3 390 538 1 134 5.47e-36 132
Msa0362740 MtrunA17_Chr4g0046661 39.080 174 104 1 332 503 18 191 2.17e-34 130
Msa0362740 MtrunA17_Chr4g0046701 48.387 124 62 1 382 503 2 125 6.80e-34 127
Msa0362740 MtrunA17_Chr2g0310371 46.667 120 63 1 37 156 28 146 3.29e-31 119
Msa0362740 MtrunA17_Chr5g0445541 47.581 124 59 2 9 131 15 133 6.06e-31 117
Msa0362740 MtrunA17_Chr8g0364631 24.857 523 314 13 31 526 26 496 9.81e-30 123
Msa0362740 MtrunA17_Chr5g0444981 39.344 183 108 2 341 521 11 192 1.04e-29 117
Msa0362740 MtrunA17_Chr4g0030741 25.634 355 217 8 12 362 38 349 1.08e-29 120
Msa0362740 MtrunA17_Chr2g0280011 35.354 198 116 5 338 526 7 201 1.22e-29 116
Msa0362740 MtrunA17_Chr4g0046691 28.889 270 180 4 38 302 40 302 3.14e-29 118
Msa0362740 MtrunA17_Chr5g0402971 28.114 281 181 6 38 302 41 316 6.89e-29 117
Msa0362740 MtrunA17_Chr6g0451801 27.619 315 198 8 11 302 16 323 7.10e-29 117
Msa0362740 MtrunA17_Chr4g0076181 61.333 75 29 0 73 147 1 75 2.63e-28 111
Msa0362740 MtrunA17_Chr4g0076181 35.484 93 56 2 208 300 73 161 5.43e-12 64.3
Msa0362740 MtrunA17_Chr1g0207851 27.239 268 179 7 48 302 49 313 2.10e-27 114
Msa0362740 MtrunA17_Chr3g0117321 48.276 116 59 1 41 156 11 125 3.29e-27 106
Msa0362740 MtrunA17_Chr2g0280061 34.343 198 118 5 338 526 7 201 6.08e-27 108
Msa0362740 MtrunA17_Chr5g0431601 56.627 83 35 1 73 155 1 82 2.99e-26 102
Msa0362740 MtrunA17_Chr6g0477081 25.763 295 159 5 161 449 1 241 3.28e-26 107
Msa0362740 MtrunA17_Chr4g0046671 27.143 280 183 7 38 302 45 318 5.38e-26 108
Msa0362740 MtrunA17_Chr3g0105751 28.322 286 177 10 37 303 47 323 6.12e-25 107
Msa0362740 MtrunA17_Chr5g0430051 43.478 115 63 2 2 116 4 116 1.97e-24 98.6
Msa0362740 MtrunA17_Chr3g0107561 25.080 311 203 9 6 298 18 316 7.20e-24 103
Msa0362740 MtrunA17_Chr5g0445341 51.765 85 40 1 73 156 1 85 9.88e-24 95.5
Msa0362740 MtrunA17_Chr5g0396521 31.884 207 112 4 337 515 346 551 1.26e-22 102
Msa0362740 MtrunA17_Chr6g0484771 36.154 130 81 1 73 200 1 130 1.34e-22 94.4
Msa0362740 MtrunA17_Chr8g0381541 22.561 492 304 18 28 506 34 461 2.94e-22 100
Msa0362740 MtrunA17_Chr8g0381571 22.746 488 298 18 28 502 34 455 3.10e-22 100
Msa0362740 MtrunA17_Chr3g0105761 29.524 210 130 4 345 551 6 200 4.39e-22 94.7
Msa0362740 MtrunA17_Chr4g0030761 33.766 154 75 5 392 535 3 139 6.51e-22 92.4
Msa0362740 MtrunA17_Chr3g0107551 30.000 170 116 1 338 504 4 173 8.41e-22 94.4
Msa0362740 MtrunA17_Chr3g0116721 27.193 228 122 5 144 365 1 190 9.59e-22 93.6
Msa0362740 MtrunA17_Chr2g0293411 23.711 485 293 21 35 506 39 459 1.60e-21 98.2
Msa0362740 MtrunA17_Chr8g0354571 23.214 448 288 14 67 506 98 497 3.14e-21 97.8
Msa0362740 MtrunA17_Chr8g0354531 24.330 448 282 15 67 506 220 618 1.86e-20 95.9
Msa0362740 MtrunA17_Chr2g0293421 23.136 523 305 20 2 502 7 454 5.31e-20 93.6
Msa0362740 MtrunA17_Chr3g0101641 43.210 81 46 0 183 263 2 82 7.56e-20 84.7
Msa0362740 MtrunA17_Chr0c19g0493771 24.138 464 285 17 62 509 211 623 8.36e-20 94.0
Msa0362740 MtrunA17_Chr8g0354511 23.736 455 287 17 62 506 93 497 3.53e-19 91.3
Msa0362740 MtrunA17_Chr5g0445551 62.069 58 22 0 480 537 1 58 5.06e-19 81.3
Msa0362740 MtrunA17_Chr2g0288661 20.131 457 297 16 62 503 87 490 5.36e-19 90.9
Msa0362740 MtrunA17_Chr2g0313831 22.472 445 294 17 68 506 90 489 7.19e-19 90.5
Msa0362740 MtrunA17_Chr2g0313791 22.119 538 323 18 5 506 7 484 8.19e-19 90.1
Msa0362740 MtrunA17_Chr1g0179811 30.102 196 129 6 314 506 322 512 1.35e-18 89.7
Msa0362740 MtrunA17_Chr8g0351391 24.638 483 295 15 45 506 49 483 1.53e-18 89.4
Msa0362740 MtrunA17_Chr1g0204271 22.328 524 317 16 11 506 17 478 4.25e-18 87.8
Msa0362740 MtrunA17_Chr2g0313781 21.676 549 329 18 5 506 7 501 5.19e-18 87.8
Msa0362740 MtrunA17_Chr2g0313821 22.619 504 321 22 26 506 32 489 5.82e-18 87.4
Msa0362740 MtrunA17_Chr8g0351401 28.342 187 112 4 337 506 301 482 6.86e-18 87.4
Msa0362740 MtrunA17_Chr6g0451761 27.413 259 148 9 45 290 49 280 8.41e-18 84.3
Msa0362740 MtrunA17_Chr8g0362731 23.697 422 268 12 91 506 8 381 1.15e-17 85.9
Msa0362740 MtrunA17_Chr7g0235261 21.319 455 294 13 58 502 79 479 4.79e-17 84.7
Msa0362740 MtrunA17_Chr4g0004601 23.516 455 284 18 58 502 100 500 5.58e-17 84.3
Msa0362740 MtrunA17_Chr8g0372591 29.851 134 91 1 337 470 1 131 5.94e-17 78.2
Msa0362740 MtrunA17_Chr8g0336361 22.156 501 295 15 51 506 81 531 7.67e-17 84.0
Msa0362740 MtrunA17_Chr2g0313771 22.453 481 301 16 43 506 71 496 8.52e-17 84.0
Msa0362740 MtrunA17_Chr2g0307291 22.421 504 321 19 26 506 35 491 9.89e-17 83.6
Msa0362740 MtrunA17_Chr8g0351421 27.895 190 121 4 337 512 301 488 1.17e-16 83.2
Msa0362740 MtrunA17_Chr2g0313811 21.459 466 285 15 68 506 90 501 1.19e-16 83.6
Msa0362740 MtrunA17_Chr2g0307301 22.465 503 322 17 26 506 35 491 1.20e-16 83.2
Msa0362740 MtrunA17_Chr8g0351311 23.918 485 297 15 45 506 49 484 1.35e-16 83.2
Msa0362740 MtrunA17_Chr8g0351441 27.368 190 122 4 337 512 300 487 1.48e-16 83.2
Msa0362740 MtrunA17_Chr6g0472221 22.707 458 277 15 67 506 101 499 1.68e-16 82.8
Msa0362740 MtrunA17_Chr3g0135841 34.356 163 96 5 342 498 342 499 2.41e-16 82.4
Msa0362740 MtrunA17_Chr8g0364081 21.429 462 308 14 58 504 91 512 2.87e-16 82.4
Msa0362740 MtrunA17_Chr1g0203141 20.645 465 312 14 49 506 74 488 3.79e-16 81.6
Msa0362740 MtrunA17_Chr5g0445641 46.250 80 43 0 139 218 22 101 6.81e-16 74.3
Msa0362740 MtrunA17_Chr5g0400421 29.586 169 108 4 342 506 301 462 1.03e-15 80.1
Msa0362740 MtrunA17_Chr4g0014051 22.667 450 278 17 68 502 103 497 1.57e-15 79.7
Msa0362740 MtrunA17_Chr1g0176861 42.553 94 45 3 2 95 10 94 2.08e-15 72.4
Msa0362740 MtrunA17_Chr2g0313801 20.985 467 312 17 49 506 71 489 2.81e-15 79.0
Msa0362740 MtrunA17_Chr2g0314771 25.478 157 111 2 73 223 1 157 4.18e-15 73.6
Msa0362740 MtrunA17_Chr1g0203151 21.471 340 217 10 173 509 195 487 4.68e-15 78.2
Msa0362740 MtrunA17_Chr8g0351461 25.789 190 125 4 337 512 300 487 5.40e-15 78.2
Msa0362740 MtrunA17_Chr1g0151221 33.333 159 103 3 342 498 334 491 6.39e-15 77.8
Msa0362740 MtrunA17_Chr2g0313761 22.075 453 289 17 66 506 84 484 9.73e-15 77.4
Msa0362740 MtrunA17_Chr3g0078411 29.775 178 118 4 337 511 271 444 2.01e-14 76.3
Msa0362740 MtrunA17_Chr6g0455461 29.213 178 119 3 337 511 271 444 2.33e-14 75.9
Msa0362740 MtrunA17_Chr2g0313751 21.272 456 283 15 69 506 119 516 2.58e-14 76.3
Msa0362740 MtrunA17_Chr3g0128461 20.763 472 309 16 67 525 98 517 6.10e-14 74.7
Msa0362740 MtrunA17_Chr2g0328711 50.000 56 28 0 480 535 1 56 7.41e-14 66.6
Msa0362740 MtrunA17_Chr3g0107501 21.901 484 297 14 36 504 32 449 1.58e-13 73.6
Msa0362740 MtrunA17_Chr5g0445651 56.364 55 21 1 337 391 8 59 1.68e-13 65.5
Msa0362740 MtrunA17_Chr5g0446131 22.154 325 208 9 186 506 204 487 3.13e-13 72.4
Msa0362740 MtrunA17_Chr8g0372341 30.233 129 82 2 45 168 52 177 1.46e-12 67.4
Msa0362740 MtrunA17_Chr4g0063221 25.882 170 124 2 338 506 324 492 1.46e-12 70.5
Msa0362740 MtrunA17_Chr2g0280001 32.353 136 81 3 33 165 59 186 6.86e-12 65.5
Msa0362740 MtrunA17_Chr8g0381561 32.743 113 67 3 390 502 3 106 7.86e-12 62.8
Msa0362740 MtrunA17_Chr1g0204241 29.560 159 99 4 361 506 111 269 1.19e-11 66.2
Msa0362740 MtrunA17_Chr6g0479681 19.951 406 253 13 127 509 149 505 1.34e-11 67.4
Msa0362740 MtrunA17_Chr2g0308651 28.161 174 115 5 339 506 219 388 1.44e-11 67.0
Msa0362740 MtrunA17_Chr5g0446111 53.846 52 24 0 62 113 1 52 1.52e-11 59.7
Msa0362740 MtrunA17_Chr7g0248991 31.933 119 79 2 339 457 235 351 1.99e-11 66.2
Msa0362740 MtrunA17_Chr8g0354541 28.105 153 107 3 355 506 1 151 3.79e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362740 AT3G26310.1 38.722 532 264 9 16 535 12 493 2.10e-126 382
Msa0362740 AT1G13110.1 38.113 551 282 11 1 539 1 504 3.59e-125 379
Msa0362740 AT3G26330.1 37.843 510 264 7 38 538 32 497 9.61e-121 368
Msa0362740 AT5G25120.1 39.479 537 266 8 7 535 5 490 3.91e-120 366
Msa0362740 AT3G26300.1 37.106 539 277 10 10 535 5 494 2.15e-119 364
Msa0362740 AT3G26210.1 41.200 500 242 7 46 535 40 497 6.78e-119 363
Msa0362740 AT3G26320.1 36.224 519 278 7 29 538 23 497 2.41e-118 362
Msa0362740 AT5G07990.1 35.368 557 297 10 3 547 1 506 4.94e-117 359
Msa0362740 AT5G25140.1 39.219 538 266 10 7 535 5 490 2.68e-116 356
Msa0362740 AT3G26270.1 38.550 524 267 12 26 539 23 501 7.14e-116 355
Msa0362740 AT5G57260.1 38.835 515 250 10 38 535 31 497 1.48e-115 355
Msa0362740 AT5G25180.1 37.500 536 271 9 9 535 10 490 8.79e-115 352
Msa0362740 AT3G26280.1 39.238 525 259 13 26 537 23 500 1.24e-112 347
Msa0362740 AT5G25130.1 36.784 541 285 8 1 535 1 490 2.00e-112 346
Msa0362740 AT3G26280.2 39.238 525 259 13 26 537 40 517 2.65e-112 347
Msa0362740 AT5G24950.1 36.062 513 277 7 30 535 25 493 1.31e-111 344
Msa0362740 AT3G26290.1 37.739 522 266 8 29 538 23 497 5.28e-111 343
Msa0362740 AT3G26290.2 37.739 522 266 8 29 538 36 510 6.04e-111 343
Msa0362740 AT1G13080.1 36.431 538 282 10 12 535 7 498 6.88e-111 343
Msa0362740 AT3G48280.1 34.216 529 295 6 1 528 2 478 6.34e-110 340
Msa0362740 AT3G48310.1 34.791 503 278 5 26 527 25 478 3.44e-109 338
Msa0362740 AT3G26230.1 37.705 549 276 14 4 539 3 498 2.23e-108 336
Msa0362740 AT2G24180.1 37.305 512 264 8 33 535 32 495 3.35e-108 336
Msa0362740 AT3G26180.1 36.347 542 289 15 6 535 1 498 6.25e-108 335
Msa0362740 AT4G13310.1 36.117 515 277 6 29 535 24 494 7.42e-108 335
Msa0362740 AT1G13090.2 38.105 496 249 9 33 515 24 474 8.75e-108 334
Msa0362740 AT3G48270.1 34.990 503 280 5 26 527 21 477 1.36e-107 333
Msa0362740 AT3G26170.1 35.240 542 295 12 6 535 1 498 2.77e-107 333
Msa0362740 AT2G30770.1 35.294 510 278 8 33 535 29 493 3.38e-106 330
Msa0362740 AT2G02580.1 38.419 544 275 10 5 538 4 497 7.99e-106 329
Msa0362740 AT4G36220.1 36.436 505 267 9 45 535 48 512 1.03e-104 327
Msa0362740 AT3G48300.1 34.442 511 284 6 26 535 19 479 7.88e-103 321
Msa0362740 AT3G48300.2 34.442 511 284 6 26 535 21 481 8.36e-103 321
Msa0362740 AT3G48290.2 35.152 495 297 5 36 527 32 505 2.39e-102 321
Msa0362740 AT2G45560.1 35.780 545 284 13 8 535 9 504 2.41e-102 321
Msa0362740 AT2G45550.1 34.444 540 298 10 8 535 9 504 2.63e-102 321
Msa0362740 AT4G31500.1 34.843 508 281 6 37 535 29 495 1.13e-100 316
Msa0362740 AT3G26160.1 35.401 548 291 13 1 535 1 498 1.45e-100 316
Msa0362740 AT3G26150.1 34.973 549 290 13 1 535 3 498 2.55e-99 313
Msa0362740 AT4G13290.1 33.592 515 282 7 29 535 25 487 2.64e-99 312
Msa0362740 AT3G48320.1 34.047 514 289 5 15 527 14 478 8.62e-99 311
Msa0362740 AT5G24960.1 36.047 516 278 8 28 535 23 494 8.91e-99 311
Msa0362740 AT1G11610.1 34.320 507 281 7 36 535 32 493 1.08e-98 311
Msa0362740 AT3G26220.1 37.316 544 286 13 8 539 1 501 1.90e-98 310
Msa0362740 AT3G48290.1 33.469 493 282 4 36 527 32 479 2.34e-98 310
Msa0362740 AT2G30750.1 34.757 515 284 7 28 535 24 493 4.90e-98 309
Msa0362740 AT2G45570.1 34.082 534 303 8 11 535 12 505 4.92e-98 310
Msa0362740 AT1G11610.2 33.597 506 284 7 30 528 26 486 5.83e-96 304
Msa0362740 AT1G13100.1 36.089 496 251 11 46 525 37 482 5.53e-95 301
Msa0362740 AT1G33720.1 34.015 538 305 10 8 536 9 505 2.76e-94 300
Msa0362740 AT4G13770.1 34.113 513 282 9 35 535 28 496 2.76e-94 300
Msa0362740 AT3G26190.1 36.100 518 270 11 37 539 28 499 5.22e-94 299
Msa0362740 AT3G44250.1 35.616 511 279 7 33 534 24 493 7.82e-94 298
Msa0362740 AT3G26200.1 35.838 519 278 10 29 535 20 495 2.51e-93 297
Msa0362740 AT5G04330.1 34.247 511 281 11 38 535 33 501 3.10e-92 295
Msa0362740 AT3G61040.1 33.333 507 282 8 38 535 34 493 1.16e-91 293
Msa0362740 AT3G26830.1 34.132 501 272 9 33 520 24 479 1.60e-91 292
Msa0362740 AT5G44620.1 32.932 498 282 7 46 535 55 508 3.79e-91 292
Msa0362740 AT4G12300.1 33.022 536 299 12 12 535 18 505 5.17e-91 291
Msa0362740 AT4G12320.1 31.827 531 309 10 15 535 20 507 1.37e-90 290
Msa0362740 AT3G53280.1 34.236 517 285 10 33 538 24 496 1.61e-87 282
Msa0362740 AT5G06900.1 31.970 538 303 11 7 535 6 489 2.52e-87 281
Msa0362740 AT5G42590.1 34.070 543 301 11 1 535 1 494 5.02e-87 280
Msa0362740 AT2G40890.1 32.008 503 281 7 35 523 25 480 3.49e-85 276
Msa0362740 AT4G22710.1 32.129 498 285 8 46 535 62 514 4.79e-84 273
Msa0362740 AT3G53300.1 33.728 507 289 8 37 535 28 495 7.58e-84 272
Msa0362740 AT4G22690.1 31.526 498 288 8 46 535 93 545 3.96e-83 272
Msa0362740 AT2G45580.1 32.630 521 296 9 27 535 28 505 5.19e-82 268
Msa0362740 AT4G12310.1 31.200 500 291 10 46 535 53 509 2.16e-81 266
Msa0362740 AT4G12330.1 31.725 539 305 10 12 535 17 507 4.95e-80 263
Msa0362740 AT2G42250.1 29.433 547 324 10 3 535 9 507 7.62e-79 259
Msa0362740 AT5G35715.1 31.712 473 273 8 73 535 1 433 3.14e-78 256
Msa0362740 AT4G37320.1 31.321 530 287 15 11 525 8 475 2.48e-76 252
Msa0362740 AT1G33730.1 34.414 401 217 7 139 532 4 365 1.99e-75 246
Msa0362740 AT1G33730.2 34.414 401 217 7 139 532 4 365 1.99e-75 246
Msa0362740 AT3G52970.1 30.460 522 301 11 37 539 36 514 7.62e-75 249
Msa0362740 AT4G37430.1 30.926 540 322 14 11 544 1 495 1.03e-74 248
Msa0362740 AT5G67310.1 30.320 531 298 17 5 525 18 486 2.09e-74 248
Msa0362740 AT5G06905.1 30.326 521 296 11 9 508 7 481 3.80e-74 247
Msa0362740 AT1G13080.2 33.753 397 205 8 153 535 28 380 4.29e-74 243
Msa0362740 AT1G01280.1 32.325 529 297 12 4 515 1 485 4.88e-74 246
Msa0362740 AT4G13310.2 34.550 411 218 5 29 432 24 390 1.16e-73 242
Msa0362740 AT4G15360.1 28.909 550 330 12 1 536 1 503 3.44e-73 245
Msa0362740 AT2G25160.1 31.319 546 303 17 1 523 1 497 8.61e-73 244
Msa0362740 AT3G52970.2 29.664 536 301 11 37 539 36 528 1.28e-72 243
Msa0362740 AT3G20090.2 30.041 486 282 9 48 522 54 492 3.30e-71 239
Msa0362740 AT4G37410.1 34.137 498 274 15 35 526 28 477 7.47e-71 238
Msa0362740 AT3G20940.1 28.713 505 303 8 26 519 31 489 5.87e-70 236
Msa0362740 AT4G37330.1 30.263 532 295 11 5 525 6 472 9.18e-70 234
Msa0362740 AT5G57220.1 32.108 517 286 13 35 544 28 486 1.36e-69 234
Msa0362740 AT4G15330.1 28.571 504 304 8 28 522 29 485 2.04e-69 234
Msa0362740 AT1G33720.4 33.577 411 227 7 133 536 2 373 3.78e-69 229
Msa0362740 AT1G33720.3 33.577 411 227 7 133 536 2 373 3.78e-69 229
Msa0362740 AT1G33720.5 33.577 411 227 7 133 536 2 373 3.78e-69 229
Msa0362740 AT4G37340.1 29.379 531 295 15 9 522 5 472 1.13e-68 232
Msa0362740 AT3G32047.1 28.600 493 296 8 48 529 53 500 2.73e-68 231
Msa0362740 AT1G74550.1 29.121 546 305 13 1 534 1 476 3.70e-68 230
Msa0362740 AT1G33720.2 33.820 411 251 6 133 536 2 398 5.70e-68 227
Msa0362740 AT3G20130.1 27.841 528 320 10 26 540 31 510 5.18e-67 228
Msa0362740 AT3G20950.1 27.907 559 330 12 4 542 13 518 5.78e-67 228
Msa0362740 AT4G31940.1 28.682 516 300 12 45 534 40 513 1.19e-66 227
Msa0362740 AT3G20140.1 28.963 511 301 10 26 525 31 490 1.41e-66 227
Msa0362740 AT5G10610.1 28.172 536 325 9 8 535 4 487 1.49e-66 226
Msa0362740 AT3G20110.1 29.264 516 310 8 3 508 1 471 1.85e-66 226
Msa0362740 AT4G15350.1 29.472 492 285 9 48 525 45 488 1.98e-66 226
Msa0362740 AT4G37310.1 28.000 550 324 12 1 533 1 495 2.05e-66 226
Msa0362740 AT3G25180.1 29.412 527 315 11 11 525 12 493 3.52e-66 226
Msa0362740 AT1G50520.1 28.931 477 281 8 46 508 52 484 9.07e-66 225
Msa0362740 AT5G36220.1 29.128 539 300 13 4 525 8 481 9.47e-66 224
Msa0362740 AT5G42580.1 28.144 501 284 10 58 547 60 495 1.53e-65 224
Msa0362740 AT4G31970.1 28.988 514 300 11 45 534 40 512 2.10e-65 224
Msa0362740 AT5G10600.1 28.462 520 308 11 37 546 46 511 2.34e-65 224
Msa0362740 AT5G47990.1 28.157 483 289 7 48 519 53 488 3.25e-65 223
Msa0362740 AT3G20100.1 29.124 491 285 9 46 522 50 491 4.89e-65 223
Msa0362740 AT1G28430.1 29.963 534 300 11 4 523 17 490 6.43e-65 223
Msa0362740 AT4G37400.1 30.120 498 275 14 46 528 40 479 1.49e-64 221
Msa0362740 AT2G14100.1 29.387 473 276 11 48 508 54 480 9.44e-64 219
Msa0362740 AT3G20120.4 28.711 512 298 11 48 546 52 509 1.39e-62 216
Msa0362740 AT1G50560.1 28.571 476 281 8 48 508 54 485 2.35e-62 216
Msa0362740 AT3G28740.1 30.000 510 286 11 36 531 38 490 3.94e-62 215
Msa0362740 AT3G20960.2 28.571 469 275 10 65 521 69 489 1.42e-61 214
Msa0362740 AT3G26180.2 47.847 209 106 2 328 535 158 364 2.05e-61 209
Msa0362740 AT3G26180.2 39.823 113 63 4 6 117 1 109 4.14e-17 84.0
Msa0362740 AT4G37360.1 28.492 537 304 16 5 525 3 475 2.49e-61 212
Msa0362740 AT4G37370.1 28.571 525 299 13 14 525 12 473 4.18e-61 212
Msa0362740 AT2G23220.1 28.298 523 299 12 25 533 38 498 4.88e-61 212
Msa0362740 AT5G24960.2 33.414 413 224 7 28 433 23 391 1.19e-60 207
Msa0362740 AT4G20240.1 29.195 435 255 9 37 464 33 421 1.66e-60 209
Msa0362740 AT2G27000.1 28.543 494 296 8 28 508 30 479 2.99e-60 210
Msa0362740 AT2G23190.1 28.205 546 312 16 3 534 49 528 7.12e-60 209
Msa0362740 AT2G45580.2 32.275 378 204 7 168 535 16 351 3.40e-59 202
Msa0362740 AT1G74540.1 27.632 532 319 12 10 531 4 479 1.93e-58 204
Msa0362740 AT5G09970.1 29.889 542 298 20 5 519 30 516 6.13e-58 204
Msa0362740 AT4G31950.1 27.379 515 296 13 45 534 40 501 2.48e-56 199
Msa0362740 AT4G15330.2 26.488 521 294 10 11 522 17 457 4.85e-55 195
Msa0362740 AT2G46660.1 27.692 520 307 16 25 531 58 521 7.26e-55 196
Msa0362740 AT1G74110.1 29.730 518 286 16 40 532 66 530 3.03e-54 194
Msa0362740 AT3G20130.2 26.136 528 301 11 26 540 31 482 1.79e-53 191
Msa0362740 AT3G20080.2 26.233 507 313 8 26 519 31 489 6.62e-52 187
Msa0362740 AT3G20080.1 26.233 507 313 8 26 519 31 489 6.62e-52 187
Msa0362740 AT3G53290.1 30.349 458 248 9 91 539 11 406 1.31e-51 184
Msa0362740 AT2G05180.1 27.419 434 266 6 48 475 52 442 2.84e-51 184
Msa0362740 AT4G20240.2 28.960 404 235 8 37 434 33 390 3.26e-51 182
Msa0362740 AT2G30490.1 26.549 565 333 14 1 546 1 502 4.89e-51 184
Msa0362740 AT1G66540.1 27.990 418 236 8 121 527 1 364 1.05e-50 181
Msa0362740 AT1G64940.1 26.619 556 346 14 1 539 1 511 1.31e-50 183
Msa0362740 AT3G20960.1 27.650 434 254 10 100 521 1 386 1.84e-50 181
Msa0362740 AT3G61880.1 28.407 521 300 19 28 531 58 522 1.00e-48 179
Msa0362740 AT4G15380.1 25.259 483 302 9 63 535 68 501 1.49e-48 178
Msa0362740 AT3G61880.2 28.407 521 300 19 28 531 58 522 1.87e-48 178
Msa0362740 AT2G27010.1 26.482 506 297 11 28 522 26 467 1.92e-48 177
Msa0362740 AT1G13710.1 28.125 480 266 16 48 504 59 482 2.56e-48 177
Msa0362740 AT3G61040.2 28.676 408 235 8 38 436 34 394 3.06e-48 174
Msa0362740 AT1G79370.1 26.163 516 327 11 14 509 24 505 3.95e-47 174
Msa0362740 AT1G64950.1 26.515 528 328 14 30 539 25 510 4.52e-45 168
Msa0362740 AT3G03470.1 26.286 525 327 14 14 520 8 490 5.55e-45 168
Msa0362740 AT3G20090.1 27.059 425 248 9 133 546 1 374 7.79e-45 164
Msa0362740 AT3G10560.1 25.595 504 319 11 14 504 20 480 9.75e-45 167
Msa0362740 AT4G39950.1 25.142 529 315 13 8 507 27 503 1.46e-44 167
Msa0362740 AT1G11600.1 29.240 513 312 16 31 531 29 502 1.80e-44 166
Msa0362740 AT4G39950.2 25.142 529 315 13 8 507 67 543 5.04e-44 166
Msa0362740 AT1G58260.1 24.581 537 325 15 12 515 10 499 6.08e-44 165
Msa0362740 AT2G12190.1 26.679 521 322 14 29 531 24 502 6.19e-44 165
Msa0362740 AT1G01190.1 26.113 494 302 14 36 519 72 512 3.21e-43 163
Msa0362740 AT5G05260.2 25.650 577 341 17 8 551 8 529 3.26e-43 163
Msa0362740 AT2G25160.2 29.018 448 251 15 1 427 1 402 3.97e-43 160
Msa0362740 AT1G01190.2 26.113 494 302 14 36 519 77 517 4.20e-43 163
Msa0362740 AT2G22330.1 23.608 521 335 10 15 515 36 513 4.52e-43 163
Msa0362740 AT2G22330.2 23.872 532 340 11 4 515 50 536 6.83e-43 163
Msa0362740 AT5G04630.1 25.245 511 327 13 9 504 6 476 7.25e-42 159
Msa0362740 AT3G20120.2 29.904 311 161 7 241 546 115 373 7.25e-42 156
Msa0362740 AT3G20120.3 29.904 311 161 7 241 546 115 373 7.25e-42 156
Msa0362740 AT3G20120.1 29.904 311 161 7 241 546 115 373 7.25e-42 156
Msa0362740 AT2G45580.3 28.708 418 243 9 27 432 28 402 2.27e-41 155
Msa0362740 AT5G61320.1 27.975 479 272 14 62 526 58 477 8.21e-41 155
Msa0362740 AT1G66540.2 39.791 191 107 2 337 527 123 305 1.75e-40 150
Msa0362740 AT5G36220.2 28.487 337 187 5 189 525 53 335 6.11e-40 150
Msa0362740 AT1G13090.1 32.746 284 170 7 33 304 24 298 3.75e-39 146
Msa0362740 AT3G20935.1 37.696 191 109 3 338 523 133 318 1.03e-38 146
Msa0362740 AT1G16410.1 22.985 583 355 14 6 553 14 537 2.47e-37 146
Msa0362740 AT1G16400.1 24.008 529 324 12 11 506 14 497 3.44e-37 146
Msa0362740 AT1G64930.1 25.709 529 332 16 30 539 25 511 4.33e-37 145
Msa0362740 AT5G25900.1 22.718 493 312 10 36 509 40 482 1.12e-36 144
Msa0362740 AT5G04660.1 25.439 456 279 12 64 504 70 479 2.15e-35 140
Msa0362740 AT3G10570.1 25.658 456 291 11 57 504 65 480 8.78e-35 139
Msa0362740 AT3G25180.2 24.537 432 268 11 11 428 12 399 2.14e-32 130
Msa0362740 AT3G20080.4 25.146 342 201 6 187 519 57 352 3.61e-32 129
Msa0362740 AT3G20080.5 25.146 342 201 6 187 519 57 352 3.61e-32 129
Msa0362740 AT3G20080.6 25.146 342 201 6 187 519 57 352 3.61e-32 129
Msa0362740 AT3G20080.3 25.146 342 201 6 187 519 57 352 3.61e-32 129
Msa0362740 AT1G64900.1 25.388 516 318 14 44 539 38 506 6.18e-32 130
Msa0362740 AT5G35917.1 24.724 453 253 13 36 460 41 433 2.96e-29 122
Msa0362740 AT2G45560.2 29.801 302 184 10 8 292 9 299 2.45e-28 116
Msa0362740 AT3G53305.1 45.865 133 67 1 387 519 185 312 3.12e-28 116
Msa0362740 AT3G53305.1 33.537 164 101 4 73 228 1 164 1.30e-16 82.0
Msa0362740 AT2G45560.3 32.340 235 139 7 8 228 9 237 1.09e-27 112
Msa0362740 AT4G20235.1 27.586 261 157 7 1 256 1 234 4.06e-27 113
Msa0362740 AT4G20235.1 42.105 76 43 1 432 506 255 330 1.05e-14 76.3
Msa0362740 AT1G16410.2 22.717 449 272 11 6 427 14 414 2.83e-26 112
Msa0362740 AT5G05260.1 32.110 218 134 5 338 551 290 497 7.84e-26 112
Msa0362740 AT5G05260.1 28.144 167 108 4 8 165 8 171 1.55e-13 73.9
Msa0362740 AT3G14640.1 23.689 515 298 21 27 506 33 487 2.90e-24 107
Msa0362740 AT3G14640.2 23.689 515 298 20 27 506 55 509 4.14e-24 107
Msa0362740 AT3G53130.1 23.517 472 302 15 41 499 80 505 6.58e-21 97.1
Msa0362740 AT3G14680.1 22.047 508 314 17 26 506 33 485 1.14e-20 96.3
Msa0362740 AT4G15110.1 25.000 516 294 16 48 515 89 559 2.04e-20 95.9
Msa0362740 AT3G14650.1 21.366 454 289 15 65 506 88 485 7.88e-20 93.6
Msa0362740 AT3G14620.1 21.145 454 295 17 62 506 89 488 1.12e-19 93.2
Msa0362740 AT2G26170.1 24.663 519 305 20 11 498 21 484 1.51e-19 92.8
Msa0362740 AT1G05160.2 21.667 480 304 14 37 505 45 463 1.18e-18 89.7
Msa0362740 AT1G05160.1 21.667 480 304 14 37 505 45 463 1.18e-18 89.7
Msa0362740 AT2G45510.1 28.962 183 115 5 337 506 300 480 1.35e-18 89.7
Msa0362740 AT3G14610.1 20.940 468 304 15 69 523 91 505 4.33e-18 88.2
Msa0362740 AT3G14690.2 20.935 492 302 16 45 506 86 520 4.88e-18 88.2
Msa0362740 AT3G14690.1 20.935 492 302 16 45 506 51 485 5.31e-18 88.2
Msa0362740 AT3G14630.1 23.566 488 294 18 45 506 47 481 2.33e-17 85.9
Msa0362740 AT2G44890.1 24.026 462 288 17 64 506 63 480 2.77e-17 85.9
Msa0362740 AT3G14630.2 23.566 488 294 18 45 506 102 536 4.01e-17 85.5
Msa0362740 AT1G31800.1 30.000 200 129 7 314 509 352 544 4.05e-17 85.5
Msa0362740 AT3G14660.1 20.530 453 296 14 64 506 87 485 6.79e-17 84.7
Msa0362740 AT2G26170.2 41.667 108 61 2 392 498 295 401 4.41e-16 81.6
Msa0362740 AT1G19630.1 23.647 499 284 20 8 483 1 425 1.07e-15 80.5
Msa0362740 AT1G19630.3 23.647 499 284 20 8 483 1 425 1.08e-15 80.5
Msa0362740 AT3G19270.2 22.047 508 311 14 15 511 12 445 1.33e-15 80.1
Msa0362740 AT5G24900.1 22.594 478 303 18 67 526 95 523 3.79e-15 79.0
Msa0362740 AT2G32440.2 20.980 510 325 15 3 502 16 457 3.96e-15 79.0
Msa0362740 AT2G32440.1 20.980 510 325 15 3 502 16 457 3.96e-15 79.0
Msa0362740 AT5G38970.2 26.271 236 146 5 309 540 163 374 5.72e-15 77.8
Msa0362740 AT5G38970.4 26.271 236 146 5 309 540 163 374 5.72e-15 77.8
Msa0362740 AT5G38970.1 26.271 236 146 5 309 540 244 455 1.28e-14 77.0
Msa0362740 AT5G24910.1 21.253 447 305 14 67 506 99 505 1.86e-14 77.0
Msa0362740 AT5G24900.2 28.718 195 127 6 339 526 217 406 1.94e-14 76.3
Msa0362740 AT2G26710.1 27.811 169 120 2 339 506 321 488 2.22e-14 76.6
Msa0362740 AT3G26125.1 21.446 415 241 13 130 506 138 505 7.17e-14 75.1
Msa0362740 AT1G47620.1 24.752 202 147 4 317 513 294 495 9.68e-14 74.7
Msa0362740 AT1G65340.1 24.497 298 180 10 223 513 224 483 1.93e-13 73.6
Msa0362740 AT1G57750.1 24.895 237 161 6 303 528 266 496 2.41e-13 73.2
Msa0362740 AT5G35920.1 33.333 111 72 1 396 504 6 116 3.20e-13 68.2
Msa0362740 AT3G14660.2 27.219 169 120 3 339 506 173 339 5.47e-13 71.2
Msa0362740 AT2G44890.2 24.590 183 109 5 337 506 296 462 6.71e-13 72.0
Msa0362740 AT1G19630.2 23.077 481 278 18 8 465 1 412 7.89e-13 71.2
Msa0362740 AT1G13150.1 25.463 216 146 5 306 506 275 490 8.28e-13 71.6
Msa0362740 AT1G13140.1 24.793 242 161 6 279 499 249 490 8.37e-13 71.6
Msa0362740 AT5G38450.1 30.366 191 125 4 339 525 325 511 9.13e-13 71.6
Msa0362740 AT1G13140.2 26.087 184 125 4 327 499 281 464 1.39e-12 70.9
Msa0362740 AT1G69500.1 22.078 462 282 13 85 506 73 496 4.08e-12 69.3
Msa0362740 AT3G61035.1 25.373 268 176 9 46 303 51 304 7.78e-11 64.3

Find 147 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTATAATTGGTAGCTTTAT+TGG 0.107418 3_1:-54325499 None:intergenic
TCGTCTGCTGCCAATGTTTC+TGG 0.123580 3_1:-54328382 None:intergenic
TGCATTATTTCACTGGTTTA+AGG 0.145231 3_1:+54326061 Msa0362740:CDS
TCAAGGGAATCTGTTATATT+TGG 0.169092 3_1:-54326300 None:intergenic
CATCTCCTTATGGTAATTAT+TGG 0.176141 3_1:+54325746 Msa0362740:CDS
TGTGCTTTCTTCATAACTTT+TGG 0.177680 3_1:-54326802 None:intergenic
TAATTCAGCTTGGTCATTAA+TGG 0.200116 3_1:-54326166 None:intergenic
GAGAACTCTTCTTCTCTAAT+TGG 0.217555 3_1:-54325832 None:intergenic
AGCAATCCATTTGACAATAT+TGG 0.220075 3_1:-54325854 None:intergenic
ATATGCCCAGGGAGCATATT+TGG 0.227610 3_1:+54327156 Msa0362740:CDS
ACGACCACCTTAGTCTTAAT+TGG 0.228656 3_1:-54326997 None:intergenic
CAATGTTTCTGGAAATCTTT+TGG 0.240657 3_1:-54328371 None:intergenic
CTTCTTGCCAAAGGCAGATT+TGG 0.255741 3_1:-54325941 None:intergenic
TTGGACATGACCGAGGAATT+TGG 0.256803 3_1:+54327261 Msa0362740:CDS
TTGTGTAAATTTCCTATAAT+TGG 0.268961 3_1:-54325511 None:intergenic
TTCTACCATTGCCCAATCTA+TGG 0.288739 3_1:-54326767 None:intergenic
AATTCCGAAGCTAGGACTTT+AGG 0.292876 3_1:-54325694 None:intergenic
TGACGACTGATTTCAAATAA+TGG 0.296460 3_1:-54326888 None:intergenic
ATGATATTAACTTTGCAATA+AGG 0.302055 3_1:+54325671 Msa0362740:CDS
AGAGACTTGGCCAGAAAATA+TGG 0.303414 3_1:+54325565 Msa0362740:CDS
CCAATAAAGCTACCAATTAT+AGG 0.310453 3_1:+54325499 Msa0362740:CDS
GGTAGCTTTATTGGCCCTTT+AGG 0.313593 3_1:-54325490 None:intergenic
GCACAGGAATGTGTAGTCTA+AGG 0.313618 3_1:-54326918 None:intergenic
CAATATCAAGGCTATAATTC+TGG 0.336701 3_1:+54326260 Msa0362740:CDS
TCTGGTTCAGTCCAGTAGTT+TGG 0.337087 3_1:-54327045 None:intergenic
GGTATAATTTCATCTCCTTA+TGG 0.340822 3_1:+54325736 Msa0362740:CDS
CCGCCGATATAAACTTATCT+TGG 0.345151 3_1:-54325972 None:intergenic
TACACCTTGAGTGAGGTTAA+TGG 0.346057 3_1:-54325893 None:intergenic
ACGACAAGAGAGTTGGAAAA+AGG 0.364127 3_1:+54328401 Msa0362740:CDS
ACCAATAAAGGCGTCCAGAT+TGG 0.367644 3_1:+54328236 Msa0362740:intron
ACACCTTGAGTGAGGTTAAT+GGG 0.368641 3_1:-54325892 None:intergenic
TGGAATCAAAAGCGAAGAAT+TGG 0.375550 3_1:+54327242 Msa0362740:CDS
ATTCTTTCCAAATCTGCCTT+TGG 0.376487 3_1:+54325934 Msa0362740:CDS
TTCACTGTCGGTACCCAATC+TGG 0.384231 3_1:-54328250 None:intergenic
GACAACGCTATTGACTATAA+AGG 0.387116 3_1:+54327093 Msa0362740:CDS
CTCTCTGGATAAAATTTCTC+TGG 0.397381 3_1:-54327063 None:intergenic
AGAGTGCAGGTGGTGGCTAT+TGG 0.410105 3_1:+54328289 Msa0362740:CDS
TAATGCAGCCATGTAATAGA+AGG 0.413703 3_1:-54326045 None:intergenic
CCCTTGATGCATCTTCAACT+TGG 0.414015 3_1:+54325589 Msa0362740:CDS
GCAGGCTAATGTTGGTTGGC+TGG 0.422379 3_1:+54328314 Msa0362740:CDS
TCGACAGGTTGATCAGATAA+TGG 0.422786 3_1:+54326104 Msa0362740:CDS
CCAATAAAGGCGTCCAGATT+GGG 0.423339 3_1:+54328237 Msa0362740:intron
GGGCAATGGTAGAAATGATA+AGG 0.425387 3_1:+54326776 Msa0362740:CDS
CATCAGCAAGCACCATAGAT+TGG 0.427902 3_1:+54326755 Msa0362740:CDS
AGAGGAGGCGGTCACAGAGC+TGG 0.429941 3_1:+54328340 Msa0362740:CDS
CAACTTATAACCTTCCTAAA+GGG 0.438018 3_1:+54325476 Msa0362740:CDS
TTCCACTTAAAAGATATTCA+AGG 0.451319 3_1:-54326317 None:intergenic
ACATGGCTGCATTATTTCAC+TGG 0.454725 3_1:+54326054 Msa0362740:CDS
AGTTGTTTCCTTCTATTACA+TGG 0.462554 3_1:+54326037 Msa0362740:CDS
TCTAACTAAAGACAATATCA+AGG 0.463649 3_1:+54326248 Msa0362740:CDS
ATCAGCAAGCACCATAGATT+GGG 0.464173 3_1:+54326756 Msa0362740:CDS
AATAAAACAACAACGTTGCA+AGG 0.464680 3_1:-54327200 None:intergenic
CACTCTCTTGGTAGTAAAAG+AGG 0.475300 3_1:-54326940 None:intergenic
ACAACGCTATTGACTATAAA+GGG 0.477996 3_1:+54327094 Msa0362740:CDS
TTTCATCACCTGACTGTGCT+AGG 0.479163 3_1:+54325632 Msa0362740:CDS
CTCAAACCAAATATGCTCCC+TGG 0.480427 3_1:-54327162 None:intergenic
AGTTCTCCAATATTGTCAAA+TGG 0.482165 3_1:+54325848 Msa0362740:CDS
CAAAAGATTTCCAGAAACAT+TGG 0.485193 3_1:+54328372 Msa0362740:CDS
AAGAAATTAATTCCGAAGCT+AGG 0.487979 3_1:-54325702 None:intergenic
GCGTTGTCCATGAATCTCTC+TGG 0.492938 3_1:-54327078 None:intergenic
ACTCTTCTTCTCTAATTGGC+TGG 0.497277 3_1:-54325828 None:intergenic
AACCTTCTGAAACTCAAAAG+TGG 0.497830 3_1:+54328443 Msa0362740:CDS
TCACATACCAATTAAGACTA+AGG 0.500585 3_1:+54326990 Msa0362740:CDS
ATCACCTCCCTAGCACAGTC+AGG 0.503650 3_1:-54325640 None:intergenic
GAAACTCAAAAGTGGAATAG+TGG 0.503794 3_1:+54328451 Msa0362740:CDS
AGACCAAGATAAGTTTATAT+CGG 0.504533 3_1:+54325969 Msa0362740:CDS
TTAATTTCTTATAATTCCAC+AGG 0.505742 3_1:+54325715 Msa0362740:CDS
GGCAATGGTAGAAATGATAA+GGG 0.505891 3_1:+54326777 Msa0362740:CDS
GGCAAAGGATGATAAACAAA+AGG 0.507764 3_1:-54327321 None:intergenic
AAATGGATTGCTTCCGAGGA+AGG 0.509490 3_1:+54325865 Msa0362740:CDS
GCTTCCTCGCCTTTCACTGT+CGG 0.510320 3_1:-54328262 None:intergenic
AAGGCCTAAAGTCCTAGCTT+CGG 0.512758 3_1:+54325690 Msa0362740:CDS
TCAACTTATAACCTTCCTAA+AGG 0.513124 3_1:+54325475 Msa0362740:CDS
CGAGGAAGCCATGAGAGTGC+AGG 0.515025 3_1:+54328276 Msa0362740:CDS
TGTCTCCAATAATTACCATA+AGG 0.516677 3_1:-54325751 None:intergenic
CATGCTTGACCACACTCTCT+TGG 0.517336 3_1:-54326952 None:intergenic
AGCTGAATTAGATCAAGATC+TGG 0.517864 3_1:+54326179 Msa0362740:CDS
ATTCTTCGTCCCGCACCAAA+AGG 0.518550 3_1:-54327135 None:intergenic
TCGCAAGAGATCCAAACTAC+TGG 0.520277 3_1:+54327034 Msa0362740:CDS
AGGTGGTGGCTATTGGAGGC+AGG 0.521402 3_1:+54328296 Msa0362740:CDS
TCCAAGTTGAAGATGCATCA+AGG 0.523441 3_1:-54325590 None:intergenic
ATGTTGGTTGGCTGGTCTAG+AGG 0.523628 3_1:+54328322 Msa0362740:CDS
TCCACTTAAAAGATATTCAA+GGG 0.526686 3_1:-54326316 None:intergenic
GAGTTGATAAAGATTGCAGC+AGG 0.526967 3_1:+54326000 Msa0362740:CDS
CTTGGTAGTAAAAGAGGCAC+AGG 0.527800 3_1:-54326934 None:intergenic
AATAGTGGCGAGAGAATTCA+AGG 0.527973 3_1:+54328466 Msa0362740:CDS
GTGCAGGTGGTGGCTATTGG+AGG 0.528171 3_1:+54328292 Msa0362740:CDS
TCTCATGTTAAAGTTCGTCT+TGG 0.528656 3_1:+54326360 Msa0362740:CDS
TGTCAAATGGATTGCTTCCG+AGG 0.530943 3_1:+54325861 Msa0362740:CDS
TTCATCACCTGACTGTGCTA+GGG 0.531506 3_1:+54325633 Msa0362740:CDS
TCAAACCAAATATGCTCCCT+GGG 0.533323 3_1:-54327161 None:intergenic
TCTAGTTAAGCTCACATGAC+AGG 0.539550 3_1:-54327342 None:intergenic
GTCTTTACACTTCTTGCCAA+AGG 0.540103 3_1:-54325950 None:intergenic
GATCTTGATCTAATTCAGCT+TGG 0.540791 3_1:-54326176 None:intergenic
AGAAAAGATATGACAAGTAG+AGG 0.541920 3_1:-54325393 None:intergenic
GAGGAGGCGGTCACAGAGCT+GGG 0.544576 3_1:+54328341 Msa0362740:CDS
GCTTTATTGGCCCTTTAGGA+AGG 0.546707 3_1:-54325486 None:intergenic
CACTGCGACTCCAAATTCCT+CGG 0.547512 3_1:-54327271 None:intergenic
CCTTGAGAGGGTACATCGAC+AGG 0.550306 3_1:+54326089 Msa0362740:CDS
GGTCAAGCATGTGAGATTCA+TGG 0.551237 3_1:+54326964 Msa0362740:CDS
TATTGGAGGCAGGCTAATGT+TGG 0.555708 3_1:+54328306 Msa0362740:CDS
CACAGGAATGTGTAGTCTAA+GGG 0.556551 3_1:-54326917 None:intergenic
GGAGGCAGGCTAATGTTGGT+TGG 0.556691 3_1:+54328310 Msa0362740:CDS
GCAGCAGACGACAAGAGAGT+TGG 0.557877 3_1:+54328394 Msa0362740:CDS
GATTGGGTACCGACAGTGAA+AGG 0.563455 3_1:+54328253 Msa0362740:CDS
CTAAGGTGGTCGTCAATGCA+TGG 0.564358 3_1:+54327007 Msa0362740:CDS
AGGCGGTCACAGAGCTGGGT+CGG 0.565578 3_1:+54328345 Msa0362740:CDS
CCTGTCGATGTACCCTCTCA+AGG 0.567933 3_1:-54326089 None:intergenic
AGCACAAGATGAGGTGAGAG+AGG 0.569716 3_1:+54326819 Msa0362740:CDS
GTTTAAGGCCTACCCTTGAG+AGG 0.570752 3_1:+54326076 Msa0362740:CDS
AGCCACCACCTGCACTCTCA+TGG 0.572073 3_1:-54328284 None:intergenic
GTAGAGGACTAGTAGAGCCA+TGG 0.573691 3_1:-54325377 None:intergenic
GCGGGACGAAGAATATGCCC+AGG 0.574903 3_1:+54327144 Msa0362740:CDS
CCAAGTTGAAGATGCATCAA+GGG 0.578944 3_1:-54325589 None:intergenic
GTTGGCTGGTCTAGAGGAGG+CGG 0.581115 3_1:+54328328 Msa0362740:CDS
TTTGTACAACAATGGCTAAG+AGG 0.582797 3_1:-54325423 None:intergenic
TAAGCTCACATGACAGGCAA+AGG 0.582976 3_1:-54327336 None:intergenic
AGCCATGAGAGTGCAGGTGG+TGG 0.589993 3_1:+54328282 Msa0362740:CDS
CGATGTACCCTCTCAAGGGT+AGG 0.597257 3_1:-54326084 None:intergenic
GTTAATGGGTGATCCTTCCT+CGG 0.598010 3_1:-54325878 None:intergenic
TAAGGTGGTCGTCAATGCAT+GGG 0.600011 3_1:+54327008 Msa0362740:CDS
ATCACCTGACTGTGCTAGGG+AGG 0.602191 3_1:+54325636 Msa0362740:CDS
CTGTCGATGTACCCTCTCAA+GGG 0.605092 3_1:-54326088 None:intergenic
GTTCTCATAAAATATGAAGA+CGG 0.612637 3_1:+54326207 Msa0362740:CDS
ATAAAACAACAACGTTGCAA+GGG 0.613718 3_1:-54327199 None:intergenic
AGACGAACTTTAACATGAGA+CGG 0.615472 3_1:-54326357 None:intergenic
TATGAAGAAAGCACAAGATG+AGG 0.616257 3_1:+54326810 Msa0362740:CDS
AGGAGATGAAATTATACCTG+TGG 0.619165 3_1:-54325731 None:intergenic
CATCATCAGTGAGCACAAAG+AGG 0.621427 3_1:+54326131 Msa0362740:CDS
CCAAGATAAGTTTATATCGG+CGG 0.624248 3_1:+54325972 Msa0362740:CDS
AAGAAATTACACCTTGAGTG+AGG 0.627522 3_1:-54325900 None:intergenic
GGAAGCCATGAGAGTGCAGG+TGG 0.630749 3_1:+54328279 Msa0362740:CDS
TCACCCATTAACCTCACTCA+AGG 0.636789 3_1:+54325889 Msa0362740:CDS
TTTAAGGCCTACCCTTGAGA+GGG 0.639005 3_1:+54326077 Msa0362740:CDS
TTGGTTGGCTGGTCTAGAGG+AGG 0.639509 3_1:+54328325 Msa0362740:CDS
CGAAGAATTGGACATGACCG+AGG 0.640626 3_1:+54327254 Msa0362740:CDS
GCCATTGTTGTACAAAACGT+AGG 0.654824 3_1:+54325430 Msa0362740:CDS
AATTCAAGGAAAATCAAACA+TGG 0.667980 3_1:+54328480 Msa0362740:CDS
CGGGACGAAGAATATGCCCA+GGG 0.669405 3_1:+54327145 Msa0362740:CDS
CATACCAATTAAGACTAAGG+TGG 0.671400 3_1:+54326993 Msa0362740:CDS
AAGCACCATAGATTGGGCAA+TGG 0.671942 3_1:+54326762 Msa0362740:CDS
AACAATGGCTAAGAGGACAA+AGG 0.672531 3_1:-54325416 None:intergenic
ATATGAAGACGGAAACAACA+AGG 0.681274 3_1:+54326218 Msa0362740:CDS
TTTGATTGGAAGCTTCCCGG+TGG 0.682573 3_1:+54327222 Msa0362740:CDS
AAAATCCTACAACTTCAACA+TGG 0.715194 3_1:-54328511 None:intergenic
CGAACTTTAACATGAGACGG+AGG 0.721208 3_1:-54326354 None:intergenic
GGTACCGACAGTGAAAGGCG+AGG 0.733006 3_1:+54328258 Msa0362740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGTTCTTAATATATAA+TGG - chr3_1:54326470-54326489 None:intergenic 10.0%
!! TTGCTTATATTAAAAAAATT+AGG - chr3_1:54328002-54328021 None:intergenic 10.0%
!! ATAACATACACATTATTAAT+AGG - chr3_1:54327387-54327406 None:intergenic 15.0%
!!! CTCTTTTGTAATATAATTAT+TGG - chr3_1:54327741-54327760 None:intergenic 15.0%
!! TTATAAATCATGTATTTGTT+TGG + chr3_1:54327930-54327949 Msa0362740:intron 15.0%
!! TTGTGTAAATTTCCTATAAT+TGG - chr3_1:54325514-54325533 None:intergenic 20.0%
!! ATGATATTAACTTTGCAATA+AGG + chr3_1:54325671-54325690 Msa0362740:CDS 20.0%
!! TTAATTTCTTATAATTCCAC+AGG + chr3_1:54325715-54325734 Msa0362740:CDS 20.0%
!! TTAATATATAATGGCATAAG+TGG - chr3_1:54326461-54326480 None:intergenic 20.0%
!!! TTTTAGTCAACACATATTAT+TGG + chr3_1:54326486-54326505 Msa0362740:intron 20.0%
!! AATAGAACCGAAAAAATTTA+GGG - chr3_1:54326592-54326611 None:intergenic 20.0%
!! AAATAGAACCGAAAAAATTT+AGG - chr3_1:54326593-54326612 None:intergenic 20.0%
!!! GTCTAATATTTTGAACTTAA+GGG - chr3_1:54326620-54326639 None:intergenic 20.0%
!!! TGTCTAATATTTTGAACTTA+AGG - chr3_1:54326621-54326640 None:intergenic 20.0%
!! GTTCAAAATATTAGACAAAT+TGG + chr3_1:54326624-54326643 Msa0362740:intron 20.0%
!! TTGTGTGTTTAAATAGAATA+AGG + chr3_1:54327423-54327442 Msa0362740:intron 20.0%
!! CCAAAATAAAAAGTAGAAAA+TGG - chr3_1:54327464-54327483 None:intergenic 20.0%
!!! CCATTTTCTACTTTTTATTT+TGG + chr3_1:54327461-54327480 Msa0362740:intron 20.0%
!!! TTCTACTTTTTATTTTGGTT+TGG + chr3_1:54327466-54327485 Msa0362740:intron 20.0%
!!! TATATAGTTTTGAATTCGTA+AGG - chr3_1:54327554-54327573 None:intergenic 20.0%
!! TATATATTCTATTCTCGAAA+CGG + chr3_1:54327568-54327587 Msa0362740:intron 20.0%
!!! CATGTATTTTTGTTTTTTCA+TGG + chr3_1:54327901-54327920 Msa0362740:intron 20.0%
!!! AAGTCTCTTAGTTTTTTATG+TGG - chr3_1:54325553-54325572 None:intergenic 25.0%
! ACATAAAAAACTAAGAGACT+TGG + chr3_1:54325552-54325571 Msa0362740:CDS 25.0%
! AGACCAAGATAAGTTTATAT+CGG + chr3_1:54325969-54325988 Msa0362740:CDS 25.0%
! GTTCTCATAAAATATGAAGA+CGG + chr3_1:54326207-54326226 Msa0362740:CDS 25.0%
! TCTAACTAAAGACAATATCA+AGG + chr3_1:54326248-54326267 Msa0362740:CDS 25.0%
! TCCACTTAAAAGATATTCAA+GGG - chr3_1:54326319-54326338 None:intergenic 25.0%
! TTCCACTTAAAAGATATTCA+AGG - chr3_1:54326320-54326339 None:intergenic 25.0%
! TATTGGCAAAATTACACTTT+CGG + chr3_1:54326503-54326522 Msa0362740:intron 25.0%
!! TTTCGGTCTCTAAATTTTTA+AGG + chr3_1:54326520-54326539 Msa0362740:intron 25.0%
!!! TTTTAAGGTTTGTTCCATTT+TGG + chr3_1:54326535-54326554 Msa0362740:intron 25.0%
!!! CTTTAGTCCCTAAATTTTTT+CGG + chr3_1:54326582-54326601 Msa0362740:intron 25.0%
!!! TAATATTTTGAACTTAAGGG+AGG - chr3_1:54326617-54326636 None:intergenic 25.0%
! TCGTAGATGTTTAAACTTTA+AGG - chr3_1:54326677-54326696 None:intergenic 25.0%
! AATAACTATCAATAAGGTCA+AGG - chr3_1:54326704-54326723 None:intergenic 25.0%
! CTGAACAATAACTATCAATA+AGG - chr3_1:54326710-54326729 None:intergenic 25.0%
!! CTTATTGATAGTTATTGTTC+AGG + chr3_1:54326708-54326727 Msa0362740:intron 25.0%
!!! AATTTTGAGTACATTCCTTT+TGG + chr3_1:54327120-54327139 Msa0362740:CDS 25.0%
!!! CGTTGTTGTTTTATTTTGAT+TGG + chr3_1:54327208-54327227 Msa0362740:CDS 25.0%
! ACATACACATTATTAATAGG+AGG - chr3_1:54327384-54327403 None:intergenic 25.0%
! AACACACAATTACATTAACT+CGG - chr3_1:54327412-54327431 None:intergenic 25.0%
! GTGTTTAAATAGAATAAGGA+TGG + chr3_1:54327427-54327446 Msa0362740:intron 25.0%
! TTAACAAGTAACAACTGATA+AGG + chr3_1:54327596-54327615 Msa0362740:intron 25.0%
! AATTCAAGGAAAATCAAACA+TGG + chr3_1:54328480-54328499 Msa0362740:CDS 25.0%
AGAAAAGATATGACAAGTAG+AGG - chr3_1:54325396-54325415 None:intergenic 30.0%
TCAACTTATAACCTTCCTAA+AGG + chr3_1:54325475-54325494 Msa0362740:CDS 30.0%
CAACTTATAACCTTCCTAAA+GGG + chr3_1:54325476-54325495 Msa0362740:CDS 30.0%
!! CCTATAATTGGTAGCTTTAT+TGG - chr3_1:54325502-54325521 None:intergenic 30.0%
CCAATAAAGCTACCAATTAT+AGG + chr3_1:54325499-54325518 Msa0362740:CDS 30.0%
AAGAAATTAATTCCGAAGCT+AGG - chr3_1:54325705-54325724 None:intergenic 30.0%
GGTATAATTTCATCTCCTTA+TGG + chr3_1:54325736-54325755 Msa0362740:CDS 30.0%
CATCTCCTTATGGTAATTAT+TGG + chr3_1:54325746-54325765 Msa0362740:CDS 30.0%
TGTCTCCAATAATTACCATA+AGG - chr3_1:54325754-54325773 None:intergenic 30.0%
AGTTCTCCAATATTGTCAAA+TGG + chr3_1:54325848-54325867 Msa0362740:CDS 30.0%
AGCAATCCATTTGACAATAT+TGG - chr3_1:54325857-54325876 None:intergenic 30.0%
! AGTTGTTTCCTTCTATTACA+TGG + chr3_1:54326037-54326056 Msa0362740:CDS 30.0%
!! TGCATTATTTCACTGGTTTA+AGG + chr3_1:54326061-54326080 Msa0362740:CDS 30.0%
TAATTCAGCTTGGTCATTAA+TGG - chr3_1:54326169-54326188 None:intergenic 30.0%
CAATATCAAGGCTATAATTC+TGG + chr3_1:54326260-54326279 Msa0362740:CDS 30.0%
TCAAGGGAATCTGTTATATT+TGG - chr3_1:54326303-54326322 None:intergenic 30.0%
! TCCCTTGAATATCTTTTAAG+TGG + chr3_1:54326315-54326334 Msa0362740:CDS 30.0%
TGGCATAAGTGGAATATAAT+TGG - chr3_1:54326450-54326469 None:intergenic 30.0%
TGCTAACATTCGTAACTTAA+GGG - chr3_1:54326562-54326581 None:intergenic 30.0%
TAGTTAAAAGACCGACAAAA+AGG - chr3_1:54326651-54326670 None:intergenic 30.0%
! TGTGCTTTCTTCATAACTTT+TGG - chr3_1:54326805-54326824 None:intergenic 30.0%
! AGAGAGGTTTTCAAAATGAA+AGG + chr3_1:54326835-54326854 Msa0362740:CDS 30.0%
! AGGTTTTCAAAATGAAAGGA+AGG + chr3_1:54326839-54326858 Msa0362740:CDS 30.0%
! GGTTTTCAAAATGAAAGGAA+GGG + chr3_1:54326840-54326859 Msa0362740:CDS 30.0%
! TGACGACTGATTTCAAATAA+TGG - chr3_1:54326891-54326910 None:intergenic 30.0%
TCACATACCAATTAAGACTA+AGG + chr3_1:54326990-54327009 Msa0362740:CDS 30.0%
! ATTTTATCCAGAGAGATTCA+TGG + chr3_1:54327071-54327090 Msa0362740:CDS 30.0%
! ACAACGCTATTGACTATAAA+GGG + chr3_1:54327094-54327113 Msa0362740:CDS 30.0%
ATAAAACAACAACGTTGCAA+GGG - chr3_1:54327202-54327221 None:intergenic 30.0%
AATAAAACAACAACGTTGCA+AGG - chr3_1:54327203-54327222 None:intergenic 30.0%
ACACACAATTACATTAACTC+GGG - chr3_1:54327411-54327430 None:intergenic 30.0%
! TTAAGCTGGACATTTTCTAT+GGG - chr3_1:54327502-54327521 None:intergenic 30.0%
!! AATACTGAGATTTGTTAAGC+TGG - chr3_1:54327516-54327535 None:intergenic 30.0%
CACTTCCAATTGAAATAACT+AGG + chr3_1:54327764-54327783 Msa0362740:intron 30.0%
! CATAGCCTAGTTATTTCAAT+TGG - chr3_1:54327772-54327791 None:intergenic 30.0%
ACAACAATAATATCACAACG+AGG + chr3_1:54328044-54328063 Msa0362740:intron 30.0%
! CTAATTCCCTATTCAGTTTT+TGG - chr3_1:54328098-54328117 None:intergenic 30.0%
CAAAAACTGAATAGGGAATT+AGG + chr3_1:54328096-54328115 Msa0362740:intron 30.0%
TAAAGATCCAAAAGCCAAAT+AGG + chr3_1:54328122-54328141 Msa0362740:intron 30.0%
ACGTCAAAAATAAAGCGATA+AGG + chr3_1:54328180-54328199 Msa0362740:intron 30.0%
CGTCAAAAATAAAGCGATAA+GGG + chr3_1:54328181-54328200 Msa0362740:intron 30.0%
GTCAAAAATAAAGCGATAAG+GGG + chr3_1:54328182-54328201 Msa0362740:intron 30.0%
!!! CAATGTTTCTGGAAATCTTT+TGG - chr3_1:54328374-54328393 None:intergenic 30.0%
CAAAAGATTTCCAGAAACAT+TGG + chr3_1:54328372-54328391 Msa0362740:CDS 30.0%
TTTGTACAACAATGGCTAAG+AGG - chr3_1:54325426-54325445 None:intergenic 35.0%
! TCCTACGTTTTGTACAACAA+TGG - chr3_1:54325434-54325453 None:intergenic 35.0%
AGGAGATGAAATTATACCTG+TGG - chr3_1:54325734-54325753 None:intergenic 35.0%
! GCTACGAAAAATTTGTTCCT+CGG + chr3_1:54325774-54325793 Msa0362740:CDS 35.0%
GAGAACTCTTCTTCTCTAAT+TGG - chr3_1:54325835-54325854 None:intergenic 35.0%
AAGAAATTACACCTTGAGTG+AGG - chr3_1:54325903-54325922 None:intergenic 35.0%
ATTCTTTCCAAATCTGCCTT+TGG + chr3_1:54325934-54325953 Msa0362740:CDS 35.0%
CCAAGATAAGTTTATATCGG+CGG + chr3_1:54325972-54325991 Msa0362740:CDS 35.0%
TAATGCAGCCATGTAATAGA+AGG - chr3_1:54326048-54326067 None:intergenic 35.0%
GATCTTGATCTAATTCAGCT+TGG - chr3_1:54326179-54326198 None:intergenic 35.0%
AGCTGAATTAGATCAAGATC+TGG + chr3_1:54326179-54326198 Msa0362740:CDS 35.0%
ATATGAAGACGGAAACAACA+AGG + chr3_1:54326218-54326237 Msa0362740:CDS 35.0%
AGACGAACTTTAACATGAGA+CGG - chr3_1:54326360-54326379 None:intergenic 35.0%
TCTCATGTTAAAGTTCGTCT+TGG + chr3_1:54326360-54326379 Msa0362740:CDS 35.0%
GTGCTAACATTCGTAACTTA+AGG - chr3_1:54326563-54326582 None:intergenic 35.0%
! GACAAATTGGTCCTTTTTGT+CGG + chr3_1:54326637-54326656 Msa0362740:intron 35.0%
GGCAATGGTAGAAATGATAA+GGG + chr3_1:54326777-54326796 Msa0362740:CDS 35.0%
! TATGAAGAAAGCACAAGATG+AGG + chr3_1:54326810-54326829 Msa0362740:CDS 35.0%
CATACCAATTAAGACTAAGG+TGG + chr3_1:54326993-54327012 Msa0362740:CDS 35.0%
CTCTCTGGATAAAATTTCTC+TGG - chr3_1:54327066-54327085 None:intergenic 35.0%
! GACAACGCTATTGACTATAA+AGG + chr3_1:54327093-54327112 Msa0362740:CDS 35.0%
!!! TATTTTGATTGGAAGCTTCC+CGG + chr3_1:54327219-54327238 Msa0362740:CDS 35.0%
TGGAATCAAAAGCGAAGAAT+TGG + chr3_1:54327242-54327261 Msa0362740:CDS 35.0%
GGCAAAGGATGATAAACAAA+AGG - chr3_1:54327324-54327343 None:intergenic 35.0%
! GTTAAGCTGGACATTTTCTA+TGG - chr3_1:54327503-54327522 None:intergenic 35.0%
! TATTTAGCTGGCTCATTCAT+TGG - chr3_1:54327873-54327892 None:intergenic 35.0%
CATGACTTCACATATTTAGC+TGG - chr3_1:54327885-54327904 None:intergenic 35.0%
TGTATGAATCTGAACTGCAT+TGG - chr3_1:54328027-54328046 None:intergenic 35.0%
!! ATTCCCTATTCAGTTTTTGG+TGG - chr3_1:54328095-54328114 None:intergenic 35.0%
!!! TCATCTTCCTATTTGGCTTT+TGG - chr3_1:54328132-54328151 None:intergenic 35.0%
!!! TTATTGGTTTTAGGCAACAG+AGG - chr3_1:54328224-54328243 None:intergenic 35.0%
CTGTTGCCTAAAACCAATAA+AGG + chr3_1:54328224-54328243 Msa0362740:intron 35.0%
!!! CTTTTGAGTTTCAGAAGGTT+GGG - chr3_1:54328443-54328462 None:intergenic 35.0%
!!! ACTTTTGAGTTTCAGAAGGT+TGG - chr3_1:54328444-54328463 None:intergenic 35.0%
!! AACCTTCTGAAACTCAAAAG+TGG + chr3_1:54328443-54328462 Msa0362740:CDS 35.0%
!!! TTCCACTTTTGAGTTTCAGA+AGG - chr3_1:54328448-54328467 None:intergenic 35.0%
GAAACTCAAAAGTGGAATAG+TGG + chr3_1:54328451-54328470 Msa0362740:CDS 35.0%
AACAATGGCTAAGAGGACAA+AGG - chr3_1:54325419-54325438 None:intergenic 40.0%
GCCATTGTTGTACAAAACGT+AGG + chr3_1:54325430-54325449 Msa0362740:CDS 40.0%
AGAGACTTGGCCAGAAAATA+TGG + chr3_1:54325565-54325584 Msa0362740:CDS 40.0%
! CATCAAGGGTCCATATTTTC+TGG - chr3_1:54325578-54325597 None:intergenic 40.0%
! CCAAGTTGAAGATGCATCAA+GGG - chr3_1:54325592-54325611 None:intergenic 40.0%
! TCCAAGTTGAAGATGCATCA+AGG - chr3_1:54325593-54325612 None:intergenic 40.0%
AATTCCGAAGCTAGGACTTT+AGG - chr3_1:54325697-54325716 None:intergenic 40.0%
! TTTTATGCTCAAAAGCTCCG+AGG - chr3_1:54325794-54325813 None:intergenic 40.0%
ACTCTTCTTCTCTAATTGGC+TGG - chr3_1:54325831-54325850 None:intergenic 40.0%
ACACCTTGAGTGAGGTTAAT+GGG - chr3_1:54325895-54325914 None:intergenic 40.0%
TACACCTTGAGTGAGGTTAA+TGG - chr3_1:54325896-54325915 None:intergenic 40.0%
GTCTTTACACTTCTTGCCAA+AGG - chr3_1:54325953-54325972 None:intergenic 40.0%
CCGCCGATATAAACTTATCT+TGG - chr3_1:54325975-54325994 None:intergenic 40.0%
!! GAGTTGATAAAGATTGCAGC+AGG + chr3_1:54326000-54326019 Msa0362740:CDS 40.0%
ACATGGCTGCATTATTTCAC+TGG + chr3_1:54326054-54326073 Msa0362740:CDS 40.0%
!! TCGACAGGTTGATCAGATAA+TGG + chr3_1:54326104-54326123 Msa0362740:CDS 40.0%
CGTAACTTAAGGGACCAAAA+TGG - chr3_1:54326552-54326571 None:intergenic 40.0%
!!! GTTCAGGACATTTTTTGTGC+TGG + chr3_1:54326724-54326743 Msa0362740:intron 40.0%
ATCAGCAAGCACCATAGATT+GGG + chr3_1:54326756-54326775 Msa0362740:CDS 40.0%
TTCTACCATTGCCCAATCTA+TGG - chr3_1:54326770-54326789 None:intergenic 40.0%
GGGCAATGGTAGAAATGATA+AGG + chr3_1:54326776-54326795 Msa0362740:CDS 40.0%
CACAGGAATGTGTAGTCTAA+GGG - chr3_1:54326920-54326939 None:intergenic 40.0%
! CACTCTCTTGGTAGTAAAAG+AGG - chr3_1:54326943-54326962 None:intergenic 40.0%
! CTTTTACTACCAAGAGAGTG+TGG + chr3_1:54326943-54326962 Msa0362740:CDS 40.0%
!! ACGACCACCTTAGTCTTAAT+TGG - chr3_1:54327000-54327019 None:intergenic 40.0%
! TGAGTACATTCCTTTTGGTG+CGG + chr3_1:54327125-54327144 Msa0362740:CDS 40.0%
TCAAACCAAATATGCTCCCT+GGG - chr3_1:54327164-54327183 None:intergenic 40.0%
!! TTCTTCGCTTTTGATTCCAC+CGG - chr3_1:54327241-54327260 None:intergenic 40.0%
TCTAGTTAAGCTCACATGAC+AGG - chr3_1:54327345-54327364 None:intergenic 40.0%
GCTCTTGTAAGAATGACGAA+AGG + chr3_1:54327685-54327704 Msa0362740:intron 40.0%
AGAGCCACCAAAAACTGAAT+AGG + chr3_1:54328088-54328107 Msa0362740:intron 40.0%
GAGCCACCAAAAACTGAATA+GGG + chr3_1:54328089-54328108 Msa0362740:intron 40.0%
CAAATAGGAAGATGAGAGAC+CGG + chr3_1:54328137-54328156 Msa0362740:intron 40.0%
!!! TGGACGCCTTTATTGGTTTT+AGG - chr3_1:54328233-54328252 None:intergenic 40.0%
ACGACAAGAGAGTTGGAAAA+AGG + chr3_1:54328401-54328420 Msa0362740:CDS 40.0%
AATAGTGGCGAGAGAATTCA+AGG + chr3_1:54328466-54328485 Msa0362740:CDS 40.0%
! GCTTTATTGGCCCTTTAGGA+AGG - chr3_1:54325489-54325508 None:intergenic 45.0%
!! GGTAGCTTTATTGGCCCTTT+AGG - chr3_1:54325493-54325512 None:intergenic 45.0%
CCCTTGATGCATCTTCAACT+TGG + chr3_1:54325589-54325608 Msa0362740:CDS 45.0%
TTTCATCACCTGACTGTGCT+AGG + chr3_1:54325632-54325651 Msa0362740:CDS 45.0%
TTCATCACCTGACTGTGCTA+GGG + chr3_1:54325633-54325652 Msa0362740:CDS 45.0%
AAGGCCTAAAGTCCTAGCTT+CGG + chr3_1:54325690-54325709 Msa0362740:CDS 45.0%
!! TGTCAAATGGATTGCTTCCG+AGG + chr3_1:54325861-54325880 Msa0362740:CDS 45.0%
!! AAATGGATTGCTTCCGAGGA+AGG + chr3_1:54325865-54325884 Msa0362740:CDS 45.0%
! GTTAATGGGTGATCCTTCCT+CGG - chr3_1:54325881-54325900 None:intergenic 45.0%
TCACCCATTAACCTCACTCA+AGG + chr3_1:54325889-54325908 Msa0362740:CDS 45.0%
CTTCTTGCCAAAGGCAGATT+TGG - chr3_1:54325944-54325963 None:intergenic 45.0%
! TTTAAGGCCTACCCTTGAGA+GGG + chr3_1:54326077-54326096 Msa0362740:CDS 45.0%
CATCATCAGTGAGCACAAAG+AGG + chr3_1:54326131-54326150 Msa0362740:CDS 45.0%
CGAACTTTAACATGAGACGG+AGG - chr3_1:54326357-54326376 None:intergenic 45.0%
!!! CAGGACATTTTTTGTGCTGG+AGG + chr3_1:54326727-54326746 Msa0362740:intron 45.0%
CATCAGCAAGCACCATAGAT+TGG + chr3_1:54326755-54326774 Msa0362740:CDS 45.0%
AAGCACCATAGATTGGGCAA+TGG + chr3_1:54326762-54326781 Msa0362740:CDS 45.0%
GCACAGGAATGTGTAGTCTA+AGG - chr3_1:54326921-54326940 None:intergenic 45.0%
! CTTGGTAGTAAAAGAGGCAC+AGG - chr3_1:54326937-54326956 None:intergenic 45.0%
GGTCAAGCATGTGAGATTCA+TGG + chr3_1:54326964-54326983 Msa0362740:CDS 45.0%
TAAGGTGGTCGTCAATGCAT+GGG + chr3_1:54327008-54327027 Msa0362740:CDS 45.0%
TCGCAAGAGATCCAAACTAC+TGG + chr3_1:54327034-54327053 Msa0362740:CDS 45.0%
! TCTGGTTCAGTCCAGTAGTT+TGG - chr3_1:54327048-54327067 None:intergenic 45.0%
!! GAGTACATTCCTTTTGGTGC+GGG + chr3_1:54327126-54327145 Msa0362740:CDS 45.0%
! ATATGCCCAGGGAGCATATT+TGG + chr3_1:54327156-54327175 Msa0362740:CDS 45.0%
CTCAAACCAAATATGCTCCC+TGG - chr3_1:54327165-54327184 None:intergenic 45.0%
!! TCTTCGCTTTTGATTCCACC+GGG - chr3_1:54327240-54327259 None:intergenic 45.0%
TTGGACATGACCGAGGAATT+TGG + chr3_1:54327261-54327280 Msa0362740:CDS 45.0%
TAAGCTCACATGACAGGCAA+AGG - chr3_1:54327339-54327358 None:intergenic 45.0%
CGGTCTCTCATCTTCCTATT+TGG - chr3_1:54328139-54328158 None:intergenic 45.0%
!! ACCAATAAAGGCGTCCAGAT+TGG + chr3_1:54328236-54328255 Msa0362740:intron 45.0%
!! CCAATAAAGGCGTCCAGATT+GGG + chr3_1:54328237-54328256 Msa0362740:intron 45.0%
TATTGGAGGCAGGCTAATGT+TGG + chr3_1:54328306-54328325 Msa0362740:CDS 45.0%
! GTTTAAGGCCTACCCTTGAG+AGG + chr3_1:54326076-54326095 Msa0362740:CDS 50.0%
CTGTCGATGTACCCTCTCAA+GGG - chr3_1:54326091-54326110 None:intergenic 50.0%
AGCACAAGATGAGGTGAGAG+AGG + chr3_1:54326819-54326838 Msa0362740:CDS 50.0%
CATGCTTGACCACACTCTCT+TGG - chr3_1:54326955-54326974 None:intergenic 50.0%
CTAAGGTGGTCGTCAATGCA+TGG + chr3_1:54327007-54327026 Msa0362740:CDS 50.0%
GCGTTGTCCATGAATCTCTC+TGG - chr3_1:54327081-54327100 None:intergenic 50.0%
ATTCTTCGTCCCGCACCAAA+AGG - chr3_1:54327138-54327157 None:intergenic 50.0%
TTTGATTGGAAGCTTCCCGG+TGG + chr3_1:54327222-54327241 Msa0362740:CDS 50.0%
CGAAGAATTGGACATGACCG+AGG + chr3_1:54327254-54327273 Msa0362740:CDS 50.0%
CACTGCGACTCCAAATTCCT+CGG - chr3_1:54327274-54327293 None:intergenic 50.0%
!! GCTTGCTATGTTGTGATCGC+CGG - chr3_1:54328159-54328178 None:intergenic 50.0%
! CGATAAGGGGTTGTTTCCAC+TGG + chr3_1:54328195-54328214 Msa0362740:intron 50.0%
TAGGCAACAGAGGATTCCAG+TGG - chr3_1:54328214-54328233 None:intergenic 50.0%
CCCAATCTGGACGCCTTTAT+TGG - chr3_1:54328240-54328259 None:intergenic 50.0%
TTCACTGTCGGTACCCAATC+TGG - chr3_1:54328253-54328272 None:intergenic 50.0%
!! GATTGGGTACCGACAGTGAA+AGG + chr3_1:54328253-54328272 Msa0362740:CDS 50.0%
!! ATGTTGGTTGGCTGGTCTAG+AGG + chr3_1:54328322-54328341 Msa0362740:CDS 50.0%
TCGTCTGCTGCCAATGTTTC+TGG - chr3_1:54328385-54328404 None:intergenic 50.0%
ATCACCTGACTGTGCTAGGG+AGG + chr3_1:54325636-54325655 Msa0362740:CDS 55.0%
ATCACCTCCCTAGCACAGTC+AGG - chr3_1:54325643-54325662 None:intergenic 55.0%
CGATGTACCCTCTCAAGGGT+AGG - chr3_1:54326087-54326106 None:intergenic 55.0%
CCTGTCGATGTACCCTCTCA+AGG - chr3_1:54326092-54326111 None:intergenic 55.0%
! CCTTGAGAGGGTACATCGAC+AGG + chr3_1:54326089-54326108 Msa0362740:CDS 55.0%
CGGGACGAAGAATATGCCCA+GGG + chr3_1:54327145-54327164 Msa0362740:CDS 55.0%
GCTTCCTCGCCTTTCACTGT+CGG - chr3_1:54328265-54328284 None:intergenic 55.0%
! AGAGTGCAGGTGGTGGCTAT+TGG + chr3_1:54328289-54328308 Msa0362740:CDS 55.0%
GGAGGCAGGCTAATGTTGGT+TGG + chr3_1:54328310-54328329 Msa0362740:CDS 55.0%
! GCAGGCTAATGTTGGTTGGC+TGG + chr3_1:54328314-54328333 Msa0362740:CDS 55.0%
!! TTGGTTGGCTGGTCTAGAGG+AGG + chr3_1:54328325-54328344 Msa0362740:CDS 55.0%
GCAGCAGACGACAAGAGAGT+TGG + chr3_1:54328394-54328413 Msa0362740:CDS 55.0%
GCGGGACGAAGAATATGCCC+AGG + chr3_1:54327144-54327163 Msa0362740:CDS 60.0%
!! GGTACCGACAGTGAAAGGCG+AGG + chr3_1:54328258-54328277 Msa0362740:CDS 60.0%
! CGAGGAAGCCATGAGAGTGC+AGG + chr3_1:54328276-54328295 Msa0362740:CDS 60.0%
! GGAAGCCATGAGAGTGCAGG+TGG + chr3_1:54328279-54328298 Msa0362740:CDS 60.0%
! AGCCATGAGAGTGCAGGTGG+TGG + chr3_1:54328282-54328301 Msa0362740:CDS 60.0%
AGCCACCACCTGCACTCTCA+TGG - chr3_1:54328287-54328306 None:intergenic 60.0%
! GTGCAGGTGGTGGCTATTGG+AGG + chr3_1:54328292-54328311 Msa0362740:CDS 60.0%
! AGGTGGTGGCTATTGGAGGC+AGG + chr3_1:54328296-54328315 Msa0362740:CDS 60.0%
!! GTTGGCTGGTCTAGAGGAGG+CGG + chr3_1:54328328-54328347 Msa0362740:CDS 60.0%
AGAGGAGGCGGTCACAGAGC+TGG + chr3_1:54328340-54328359 Msa0362740:CDS 65.0%
GAGGAGGCGGTCACAGAGCT+GGG + chr3_1:54328341-54328360 Msa0362740:CDS 65.0%
AGGCGGTCACAGAGCTGGGT+CGG + chr3_1:54328345-54328364 Msa0362740:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 54325379 54328519 54325379 ID=Msa0362740;Name=Msa0362740
chr3_1 mRNA 54325379 54328519 54325379 ID=Msa0362740-mRNA-1;Parent=Msa0362740;Name=Msa0362740-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|0.66|1|1|3|0|634
chr3_1 exon 54325379 54326389 54325379 ID=Msa0362740-mRNA-1:exon:9853;Parent=Msa0362740-mRNA-1
chr3_1 exon 54326730 54327349 54326730 ID=Msa0362740-mRNA-1:exon:9854;Parent=Msa0362740-mRNA-1
chr3_1 exon 54328246 54328519 54328246 ID=Msa0362740-mRNA-1:exon:9855;Parent=Msa0362740-mRNA-1
chr3_1 CDS 54325379 54326389 54325379 ID=Msa0362740-mRNA-1:cds;Parent=Msa0362740-mRNA-1
chr3_1 CDS 54326730 54327349 54326730 ID=Msa0362740-mRNA-1:cds;Parent=Msa0362740-mRNA-1
chr3_1 CDS 54328246 54328519 54328246 ID=Msa0362740-mRNA-1:cds;Parent=Msa0362740-mRNA-1
Gene Sequence

>Msa0362740

ATGGCTCTACTAGTCCTCTACTTGTCATATCTTTTCTCCTTTGTCCTCTTAGCCATTGTTGTACAAAACGTAGGAAAGAAGCTCAAGAAATCATACTCAACTTATAACCTTCCTAAAGGGCCAATAAAGCTACCAATTATAGGAAATTTACACAATCTGTTAAGTTCTCAACCACATAAAAAACTAAGAGACTTGGCCAGAAAATATGGACCCTTGATGCATCTTCAACTTGGAGAGATTTCTACTGTTGTAATTTCATCACCTGACTGTGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTAAAGTCCTAGCTTCGGAATTAATTTCTTATAATTCCACAGGTATAATTTCATCTCCTTATGGTAATTATTGGAGACAGCTACGAAAAATTTGTTCCTCGGAGCTTTTGAGCATAAAACGCGTTAACTCATACCAGCCAATTAGAGAAGAAGAGTTCTCCAATATTGTCAAATGGATTGCTTCCGAGGAAGGATCACCCATTAACCTCACTCAAGGTGTAATTTCTTCAATATACACTATTCTTTCCAAATCTGCCTTTGGCAAGAAGTGTAAAGACCAAGATAAGTTTATATCGGCGGTAAAAGAGTTGATAAAGATTGCAGCAGGTTTTGACTTAGCAGAGTTGTTTCCTTCTATTACATGGCTGCATTATTTCACTGGTTTAAGGCCTACCCTTGAGAGGGTACATCGACAGGTTGATCAGATAATGGAAAACATCATCAGTGAGCACAAAGAGGCTAATTCAAAAGCCATTAATGACCAAGCTGAATTAGATCAAGATCTGGTAGATGTTCTCATAAAATATGAAGACGGAAACAACAAGGAATTTTTTCTAACTAAAGACAATATCAAGGCTATAATTCTGGTAAGAATAATAACTCTTCCAAATATAACAGATTCCCTTGAATATCTTTTAAGTGGAAGATTTGAAATACTTCCTCCGTCTCATGTTAAAGTTCGTCTTGGAAATATTGACATTTTTTGTGCTGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAAAGTTATGAAGAAAGCACAAGATGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGACGAAAGTTGCATCAACGAGCTCCATTATTTGAAATCAGTCGTCAAAGAAACCCTTAGACTACACATTCCTGTGCCTCTTTTACTACCAAGAGAGTGTGGTCAAGCATGTGAGATTCATGGTTATCACATACCAATTAAGACTAAGGTGGTCGTCAATGCATGGGCAATCGCAAGAGATCCAAACTACTGGACTGAACCAGAGAAATTTTATCCAGAGAGATTCATGGACAACGCTATTGACTATAAAGGGAGTAATTTTGAGTACATTCCTTTTGGTGCGGGACGAAGAATATGCCCAGGGAGCATATTTGGTTTGAGAAATGTTGAGTTGACCCTTGCAACGTTGTTGTTTTATTTTGATTGGAAGCTTCCCGGTGGAATCAAAAGCGAAGAATTGGACATGACCGAGGAATTTGGAGTCGCAGTGAGAAGAAAAGATGATCTTTTATTGTTGCCTTTTGTTTATCATCCTTTGCCTGTCATGCGTCCAGATTGGGTACCGACAGTGAAAGGCGAGGAAGCCATGAGAGTGCAGGTGGTGGCTATTGGAGGCAGGCTAATGTTGGTTGGCTGGTCTAGAGGAGGCGGTCACAGAGCTGGGTCGGTTGCCAAAAGATTTCCAGAAACATTGGCAGCAGACGACAAGAGAGTTGGAAAAAGGAAACAATTATTATATTCCCAACCTTCTGAAACTCAAAAGTGGAATAGTGGCGAGAGAATTCAAGGAAAATCAAACATGGCTCTCATACCATGTTGA
Protein sequence

>Msa0362740

MALLVLYLSYLFSFVLLAIVVQNVGKKLKKSYSTYNLPKGPIKLPIIGNLHNLLSSQPHKKLRDLARKYGPLMHLQLGEISTVVISSPDCAREVMKTHDINFAIRPKVLASELISYNSTGIISSPYGNYWRQLRKICSSELLSIKRVNSYQPIREEEFSNIVKWIASEEGSPINLTQGVISSIYTILSKSAFGKKCKDQDKFISAVKELIKIAAGFDLAELFPSITWLHYFTGLRPTLERVHRQVDQIMENIISEHKEANSKAINDQAELDQDLVDVLIKYEDGNNKEFFLTKDNIKAIILVRIITLPNITDSLEYLLSGRFEILPPSHVKVRLGNIDIFCAGGETSASTIDWAMVEMIRDPKVMKKAQDEVREVFKMKGRVDESCINELHYLKSVVKETLRLHIPVPLLLPRECGQACEIHGYHIPIKTKVVVNAWAIARDPNYWTEPEKFYPERFMDNAIDYKGSNFEYIPFGAGRRICPGSIFGLRNVELTLATLLFYFDWKLPGGIKSEELDMTEEFGVAVRRKDDLLLLPFVYHPLPVMRPDWVPTVKGEEAMRVQVVAIGGRLMLVGWSRGGGHRAGSVAKRFPETLAADDKRVGKRKQLLYSQPSETQKWNSGERIQGKSNMALIPC*