AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0187450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0187450 MtrunA17_Chr7g0254611 93.966 1359 56 3 1 1337 1 1355 0.0 2409
Msa0187450 MtrunA17_Chr3g0104201 53.247 154 57 5 360 509 231 373 5.40e-36 142
Msa0187450 MtrunA17_Chr5g0429551 46.667 150 67 6 336 480 263 404 1.50e-27 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0187450 AT5G17910.3 41.191 823 357 25 6 760 7 770 3.89e-127 427
Msa0187450 AT5G17910.1 41.191 823 357 25 6 760 7 770 3.89e-127 427
Msa0187450 AT5G17910.2 41.191 823 357 25 6 760 7 770 3.89e-127 427
Msa0187450 AT2G29620.4 57.554 139 49 4 360 495 222 353 3.10e-33 139
Msa0187450 AT2G29620.5 57.554 139 49 4 360 495 222 353 3.16e-33 139
Msa0187450 AT2G29620.1 57.554 139 49 4 360 495 222 353 3.16e-33 139
Msa0187450 AT2G29620.3 57.554 139 49 4 360 495 222 353 3.16e-33 139
Msa0187450 AT2G29620.6 57.554 139 49 4 360 495 222 353 3.16e-33 139
Msa0187450 AT2G29620.2 57.554 139 49 4 360 495 222 353 3.16e-33 139
Msa0187450 AT1G07330.1 50.625 160 63 6 360 516 156 302 5.62e-32 134
Msa0187450 AT1G07330.2 50.625 160 63 6 360 516 224 370 1.65e-31 134
Msa0187450 AT5G58880.1 46.405 153 63 5 363 496 186 338 4.89e-20 97.4

Find 324 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGGACCCTTCTCAGTTT+TGG 0.127452 2_1:+2201523 Msa0187450:CDS
GAGCAATTTGGTATATATTT+AGG 0.144248 2_1:+2206723 Msa0187450:three_prime_UTR
TCCCACATATCCTTGATTTC+TGG 0.170727 2_1:+2200937 Msa0187450:five_prime_UTR
TTGCCATCATCCATTTCTTT+TGG 0.194807 2_1:+2201402 Msa0187450:CDS
AAGAGAAACCTGATCTTAAA+AGG 0.196585 2_1:+2202718 Msa0187450:CDS
TGGGTTGAAGTTCTCGATTC+TGG 0.198413 2_1:-2203419 None:intergenic
GACTGAATTAACATCTAATT+TGG 0.205824 2_1:+2203058 Msa0187450:CDS
ATACATCAAGTAGCCGTTTC+TGG 0.229119 2_1:+2206855 Msa0187450:three_prime_UTR
AGATCAGGTTTCTCTTCATT+TGG 0.244304 2_1:-2202711 None:intergenic
GAAAAGGGTGTAACTGATTC+AGG 0.249749 2_1:+2203920 Msa0187450:CDS
AAGCAACATCAATATCTTCT+AGG 0.250336 2_1:-2206196 None:intergenic
CAGCATGAGAACGAAGTAAA+AGG 0.253167 2_1:+2201811 Msa0187450:CDS
CCAGTGGGTGAACGGAATTC+AGG 0.255586 2_1:-2205681 None:intergenic
AGCAATTTGGTATATATTTA+GGG 0.265597 2_1:+2206724 Msa0187450:three_prime_UTR
CAGAACTCCAGTTGGTAAAT+TGG 0.268938 2_1:+2206364 Msa0187450:CDS
TTGTGTAGTCCAAAAGAAAT+TGG 0.276177 2_1:+2206776 Msa0187450:three_prime_UTR
ACCCTTCAGTGTGAGCAATT+TGG 0.288890 2_1:+2206711 Msa0187450:three_prime_UTR
TTGATTCCTCCACTGAAGTT+TGG 0.289051 2_1:-2203439 None:intergenic
AGGCGGGTTTGATTCATTTA+AGG 0.291619 2_1:+2202011 Msa0187450:CDS
CGAGGAATTCTTGTCAGAAT+TGG 0.293326 2_1:+2205857 Msa0187450:CDS
ACCCACTGGTGAAGTGGATT+TGG 0.293409 2_1:+2205695 Msa0187450:CDS
AGCATGGGACCTTCAGTATT+GGG 0.298527 2_1:+2202810 Msa0187450:CDS
ATGGGATCAGTGATTGAAAT+TGG 0.304328 2_1:+2201325 Msa0187450:CDS
GAAGACGACTCTGAGGATTC+AGG 0.307857 2_1:+2202093 Msa0187450:CDS
AAGAGAGGCATGATATTAAT+TGG 0.312550 2_1:+2202844 Msa0187450:CDS
CCAGATCCATAAGATTCTTT+TGG 0.313682 2_1:-2202431 None:intergenic
GTCTGCACTGCTCTTCTGCT+TGG 0.313976 2_1:+2201505 Msa0187450:CDS
GCAGAATTCTGATAACATTC+TGG 0.314438 2_1:+2205539 Msa0187450:intron
AGAAATAGGCGCAACATTAG+AGG 0.317930 2_1:-2202565 None:intergenic
ATTTCAAGCTCTCCTGTTGC+AGG 0.323313 2_1:-2203233 None:intergenic
CCAAAAGAATCTTATGGATC+TGG 0.323917 2_1:+2202431 Msa0187450:CDS
TGATTCCTCCACTGAAGTTT+GGG 0.324082 2_1:-2203438 None:intergenic
GGGTTTCGTCTAACAGAAAT+AGG 0.325631 2_1:-2202579 None:intergenic
CATTAGCGGCTCTAGTAATA+AGG 0.328342 2_1:+2206397 Msa0187450:CDS
CATCCTTCCGAGTACAATTA+AGG 0.331057 2_1:+2206100 Msa0187450:CDS
GTTCATCTATGCATGCATTA+GGG 0.334306 2_1:+2204203 Msa0187450:CDS
TTCAGGTTTGTTTCATGAAC+AGG 0.334505 2_1:+2203937 Msa0187450:CDS
ACAGAAAACTCAGCCCTTGC+AGG 0.334907 2_1:-2203866 None:intergenic
AGTTCATCTATGCATGCATT+AGG 0.335962 2_1:+2204202 Msa0187450:CDS
GAGCATCTCTAGTTTCTTCA+TGG 0.340461 2_1:-2205938 None:intergenic
AAATCAGAAGCCACGGAATC+TGG 0.340768 2_1:-2204160 None:intergenic
GATCAGGTTTCTCTTCATTT+GGG 0.352237 2_1:-2202710 None:intergenic
TTGAAATTGGAATCAAAGTT+AGG 0.353627 2_1:+2201338 Msa0187450:CDS
GAACTTGCTGACTCAGTATC+TGG 0.355850 2_1:-2202987 None:intergenic
ATTATCCTCCAGTTTGTCAT+TGG 0.366057 2_1:-2203687 None:intergenic
CACCCGTTTCCAAGATGAAC+TGG 0.366262 2_1:-2202055 None:intergenic
CTTATTACTAGAGCCGCTAA+TGG 0.369063 2_1:-2206396 None:intergenic
CAGATTTACTTTCATCCTCT+TGG 0.369414 2_1:-2202386 None:intergenic
GGTATTTCGTCGTTTCAAAC+TGG 0.372815 2_1:+2201592 Msa0187450:CDS
TCTGTCAAGCTCTGATAAAT+TGG 0.373937 2_1:+2204378 Msa0187450:CDS
CTGAGGATTCAGGGTCTGAT+AGG 0.374468 2_1:+2202103 Msa0187450:CDS
TGGCGTTGAAGAAGCGAGTT+TGG 0.380687 2_1:+2201705 Msa0187450:CDS
ATCCAGATCTTGGTGGATAA+TGG 0.381159 2_1:-2204347 None:intergenic
GGATGACCAAAAGAATCTTA+TGG 0.382692 2_1:+2202425 Msa0187450:CDS
TCTGCACTGCTCTTCTGCTT+GGG 0.384208 2_1:+2201506 Msa0187450:CDS
AAGTCTTGTTGTCAAGTTCC+AGG 0.385072 2_1:+2204311 Msa0187450:CDS
TTGATTCCTCGACTGAAGTT+CGG 0.386253 2_1:-2203472 None:intergenic
TGATTCCTCGACTGAAGTTC+GGG 0.388449 2_1:-2203471 None:intergenic
TTAGATGTTAATTCAGTCTC+TGG 0.389336 2_1:-2203053 None:intergenic
ATGGGATTACCACCCATTCC+TGG 0.392602 2_1:+2202633 Msa0187450:CDS
ATCAATATCTTCTAGGGATC+TGG 0.392909 2_1:-2206189 None:intergenic
AGAGCAGTGCAGACTAAAAC+AGG 0.394367 2_1:-2201496 None:intergenic
GCTGGATGATGTTAACTTGC+AGG 0.394645 2_1:+2201783 Msa0187450:CDS
CAATTCTCCAACTCCATCAT+TGG 0.397529 2_1:-2205589 None:intergenic
TGGTGGGTGTTAAAGATGAT+AGG 0.397636 2_1:+2201725 Msa0187450:CDS
TAAATAAGACAAAACTCTTT+CGG 0.399065 2_1:-2206508 None:intergenic
TCTTATGGATCTGGGAACTT+TGG 0.400348 2_1:+2202440 Msa0187450:CDS
TGTATCTGAAAGGATGGTTT+CGG 0.400759 2_1:+2202878 Msa0187450:CDS
GATGATTCTTATCCAGATCT+TGG 0.402368 2_1:-2204357 None:intergenic
TGTCAGAATTGGACACAGTT+GGG 0.405523 2_1:+2205868 Msa0187450:CDS
GTTTCTTCAAGAATGAGTTT+TGG 0.407616 2_1:+2206649 Msa0187450:three_prime_UTR
TTCTCTTCATTTGGGTCGTA+CGG 0.409972 2_1:-2202702 None:intergenic
ATCTAGTTTAGATACTTCAT+TGG 0.411010 2_1:-2204095 None:intergenic
GGGTTGAAGTTCTCGATTCT+GGG 0.412544 2_1:-2203418 None:intergenic
AATGGGAAAGCTCGGGGAGG+CGG 0.413424 2_1:+2201994 Msa0187450:CDS
TCTAAATGTTCTGTTTCTAC+TGG 0.415046 2_1:-2204241 None:intergenic
GTCAGCAAGTTCAGGTGATC+AGG 0.417111 2_1:+2202998 Msa0187450:CDS
CATAACGGGAGTTTCATATA+AGG 0.418793 2_1:-2205625 None:intergenic
AGGGATCTGGCTTCAATGAC+TGG 0.419793 2_1:-2206176 None:intergenic
TCCAATATCCAGAGAAAAGT+TGG 0.420593 2_1:-2203894 None:intergenic
TACCATGGGGTCTTGGCTAA+TGG 0.421052 2_1:+2206591 Msa0187450:three_prime_UTR
CGTCTAGGCTGTAGAATAGA+TGG 0.421928 2_1:-2202663 None:intergenic
GATACTGAGTCAGCAAGTTC+AGG 0.427022 2_1:+2202990 Msa0187450:CDS
TCTGGATATTGGATCAGAAA+AGG 0.427655 2_1:+2203904 Msa0187450:CDS
CACCCAGTTCATCTTGGAAA+CGG 0.428157 2_1:+2202052 Msa0187450:CDS
TGCATAGATGAACTATTAGA+AGG 0.429301 2_1:-2204193 None:intergenic
ATTGTTCACCCAGTTCATCT+TGG 0.431253 2_1:+2202046 Msa0187450:CDS
TTATCCTCCAGTTTGTCATT+GGG 0.432481 2_1:-2203686 None:intergenic
CAATGAATTTGATTATATGA+AGG 0.434052 2_1:+2205827 Msa0187450:CDS
CACCATTATCCACCAAGATC+TGG 0.434273 2_1:+2204345 Msa0187450:CDS
ACCCAGTTCATCTTGGAAAC+GGG 0.435719 2_1:+2202053 Msa0187450:CDS
AGCATGAGAACGAAGTAAAA+GGG 0.436593 2_1:+2201812 Msa0187450:CDS
GATTCATCAGGGAAATCAAA+AGG 0.437699 2_1:-2202600 None:intergenic
TGGCTAATGGTAGTCAGGTC+AGG 0.443018 2_1:+2206604 Msa0187450:three_prime_UTR
GGGTCGTACGGAATGTCAAA+AGG 0.443320 2_1:-2202690 None:intergenic
TACATCAAGTAGCCGTTTCT+GGG 0.444045 2_1:+2206856 Msa0187450:three_prime_UTR
TTCTGATAAGTTACATATGT+TGG 0.446498 2_1:+2204042 Msa0187450:CDS
TTGGAAGTTTATAAGCATCA+TGG 0.448475 2_1:+2205714 Msa0187450:CDS
ATTGGATATGTGACCTTTGT+TGG 0.451235 2_1:-2200827 None:intergenic
TCGGAAGTACCATGGGGTCT+TGG 0.451734 2_1:+2206584 Msa0187450:three_prime_UTR
ATGCCAGCATAAGATTCATC+AGG 0.456470 2_1:-2202612 None:intergenic
TTCTTCACCGGATGCTTCCA+TGG 0.459057 2_1:+2202134 Msa0187450:CDS
TCTAGTTTAGATACTTCATT+GGG 0.459929 2_1:-2204094 None:intergenic
GAATCATTTGATGTATCAAC+CGG 0.461951 2_1:+2206326 Msa0187450:CDS
GCAAATTTGCAGCATGAAGA+TGG 0.462394 2_1:+2203389 Msa0187450:CDS
AGTGATCTTACTTCAAGAAC+TGG 0.465393 2_1:-2206020 None:intergenic
TTATAATTTGATTATAGAAA+CGG 0.466513 2_1:+2206811 Msa0187450:three_prime_UTR
TAGCATGGGACCTTCAGTAT+TGG 0.467556 2_1:+2202809 Msa0187450:CDS
ATGGGAAAGCTCGGGGAGGC+GGG 0.467780 2_1:+2201995 Msa0187450:CDS
TTACTTCACTAGATTGCCTC+TGG 0.469192 2_1:-2202917 None:intergenic
GCCAGATGATAGTTTGAATC+CGG 0.469941 2_1:-2204019 None:intergenic
AGAAGATGCTTCAGTCAAAC+TGG 0.472046 2_1:+2206271 Msa0187450:CDS
CTGACTTTCATCGTGATCAC+TGG 0.472410 2_1:-2204416 None:intergenic
GTCACAGAAGAGATCATAAC+GGG 0.472705 2_1:-2205639 None:intergenic
TGGGAACTTTGGAGCTTGAA+AGG 0.474478 2_1:+2202451 Msa0187450:CDS
CAGTGGGTGAACGGAATTCA+GGG 0.474870 2_1:-2205680 None:intergenic
GTTGAGGCTGGTCATGGAAG+TGG 0.477400 2_1:+2203092 Msa0187450:CDS
AAAAGACTCACCAGAAATCA+AGG 0.477514 2_1:-2200947 None:intergenic
GATGAAGATATTGAAAATCA+TGG 0.478743 2_1:+2202312 Msa0187450:CDS
TCTAGCCTCGGAAGTACCAT+GGG 0.481018 2_1:+2206577 Msa0187450:three_prime_UTR
AGTTATCAAAGAGAAGGAGA+TGG 0.481171 2_1:+2201306 Msa0187450:exon
CGGGACAAATGAGCAGGCTG+TGG 0.481413 2_1:-2202210 None:intergenic
AAGTAAAAGGGGATGTAGAA+AGG 0.481574 2_1:+2201824 Msa0187450:CDS
TCCGGATTCAAACTATCATC+TGG 0.481934 2_1:+2204018 Msa0187450:CDS
ACGCATATTTCCGATCGAAC+AGG 0.482665 2_1:+2204285 Msa0187450:CDS
TTCCCTGATGAATCTTATGC+TGG 0.483195 2_1:+2202609 Msa0187450:CDS
CACCAGAAATCAAGGATATG+TGG 0.484640 2_1:-2200939 None:intergenic
TGGAAGTTTATAAGCATCAT+GGG 0.486241 2_1:+2205715 Msa0187450:CDS
CTGCTGCTCACATCAACACT+TGG 0.487065 2_1:-2203299 None:intergenic
TGAGAGGAAATTAAGTGAAC+GGG 0.487332 2_1:+2203022 Msa0187450:CDS
AGATGGAGCGGAACCAGGAA+TGG 0.488504 2_1:-2202646 None:intergenic
GGTGGGCTACAGTCATAAAC+TGG 0.488748 2_1:-2203539 None:intergenic
GTACAAGCCCAATGACAAAC+TGG 0.488800 2_1:+2203679 Msa0187450:CDS
CAGTGATCACGATGAAAGTC+AGG 0.489889 2_1:+2204417 Msa0187450:CDS
GGTCTTGGCTAATGGTAGTC+AGG 0.491515 2_1:+2206599 Msa0187450:three_prime_UTR
ATTCATCAGGGAAATCAAAA+GGG 0.491906 2_1:-2202599 None:intergenic
AAGACGACTCTGAGGATTCA+GGG 0.492259 2_1:+2202094 Msa0187450:CDS
CAAAAGAATCTTATGGATCT+GGG 0.494568 2_1:+2202432 Msa0187450:CDS
TGAAGAGGAAGAAGCAATGG+AGG 0.496393 2_1:+2202359 Msa0187450:CDS
AGAATCGCTAGAGCTCGAAC+TGG 0.496607 2_1:-2206453 None:intergenic
TGATGAATCTTATGCTGGCA+TGG 0.497383 2_1:+2202614 Msa0187450:CDS
TCAAGACAATGTGGAGTCTC+CGG 0.501188 2_1:+2204000 Msa0187450:CDS
ATCTATATCTTCAGATTCCT+CGG 0.502074 2_1:-2203780 None:intergenic
ATCGACGAGCAATTCAATGA+TGG 0.502286 2_1:+2203254 Msa0187450:CDS
CTGGATATTGGATCAGAAAA+GGG 0.503752 2_1:+2203905 Msa0187450:CDS
GATGCTGGCACTTCCAATGA+TGG 0.504117 2_1:+2205576 Msa0187450:CDS
TTCCGCATGCAGTTCGGAAG+AGG 0.504956 2_1:-2203738 None:intergenic
TTGTCAGAATTGGACACAGT+TGG 0.510706 2_1:+2205867 Msa0187450:CDS
TTCTAGCCTCGGAAGTACCA+TGG 0.510817 2_1:+2206576 Msa0187450:three_prime_UTR
TCTGCTCGTTTCTTCAGCAC+CGG 0.510877 2_1:-2206345 None:intergenic
TGTGGAGATGATAGAAGGTG+AGG 0.514980 2_1:+2203136 Msa0187450:CDS
CCTGCTCATTTGTCCCGTGA+TGG 0.517042 2_1:+2202216 Msa0187450:CDS
AGCAACATCAATATCTTCTA+GGG 0.518689 2_1:-2206195 None:intergenic
GAATCTGTGGAGATGATAGA+AGG 0.519386 2_1:+2203131 Msa0187450:CDS
AAATTGAGAATGGGAAAGCT+CGG 0.520186 2_1:+2201986 Msa0187450:CDS
CCTGAATTCCGTTCACCCAC+TGG 0.522633 2_1:+2205681 Msa0187450:CDS
TCGACGAGCAATTCAATGAT+GGG 0.523338 2_1:+2203255 Msa0187450:CDS
AGAATAGATGGAGCGGAACC+AGG 0.523428 2_1:-2202651 None:intergenic
GCTTGAAAGGAACCGACGAT+TGG 0.523486 2_1:+2202464 Msa0187450:CDS
AAATGTGCCTGAGTTTGAAA+AGG 0.524184 2_1:+2201552 Msa0187450:CDS
GATGGCGTTTCTGTTGAGGC+TGG 0.525036 2_1:+2203080 Msa0187450:CDS
AATTGAGAATGGGAAAGCTC+GGG 0.526233 2_1:+2201987 Msa0187450:CDS
AGAAGATGGTGTTGATGAAG+AGG 0.527905 2_1:+2202344 Msa0187450:CDS
AATGGTGTTACCTTGCTCCC+TGG 0.528340 2_1:-2204329 None:intergenic
GTTATCAAAGAGAAGGAGAT+GGG 0.528740 2_1:+2201307 Msa0187450:exon
AACCCAAAAGAAATGGATGA+TGG 0.528957 2_1:-2201405 None:intergenic
TTTGAGTTTCTTTCTAGCCT+CGG 0.529291 2_1:+2206565 Msa0187450:three_prime_UTR
TTTCAGAATCAGCAGATATG+TGG 0.533463 2_1:-2203970 None:intergenic
TTTGGATGGCGTTTCTGTTG+AGG 0.534740 2_1:+2203076 Msa0187450:CDS
GGGACAAATGAGCAGGCTGT+GGG 0.535064 2_1:-2202209 None:intergenic
CCACCTCACCACTTATATGC+TGG 0.535587 2_1:-2203499 None:intergenic
TTTGACTTCCGCATGCAGTT+CGG 0.535820 2_1:-2203744 None:intergenic
CCGTTCACCCACTGGTGAAG+TGG 0.537813 2_1:+2205689 Msa0187450:CDS
TTGGAAAATGTATCCATTAG+CGG 0.538060 2_1:+2206383 Msa0187450:CDS
ATGTCAGCCATGGAAGCATC+CGG 0.539039 2_1:-2202141 None:intergenic
AACTTAATTCCTTCAGCAGA+GGG 0.541238 2_1:+2205774 Msa0187450:CDS
AGTAAAAGGGGATGTAGAAA+GGG 0.541286 2_1:+2201825 Msa0187450:CDS
TGATGAAGAGGAAGAAGCAA+TGG 0.542971 2_1:+2202356 Msa0187450:CDS
TACCAAATTGCTCACACTGA+AGG 0.543035 2_1:-2206713 None:intergenic
TACACAAGAGGCAACACTGT+TGG 0.543270 2_1:-2206760 None:intergenic
AAAGTAAATCTGCTATCAAG+TGG 0.543875 2_1:+2202397 Msa0187450:CDS
AGCTGATCCTTAATTGTACT+CGG 0.544183 2_1:-2206107 None:intergenic
GTCAGAATTGGACACAGTTG+GGG 0.546519 2_1:+2205869 Msa0187450:CDS
TGAAATAGTGCTCGGTGGAG+TGG 0.547719 2_1:+2203184 Msa0187450:CDS
CATTCTGGTAGAACCTTCAC+AGG 0.548522 2_1:+2205554 Msa0187450:CDS
AGAGAAACCTGATCTTAAAA+GGG 0.548661 2_1:+2202719 Msa0187450:CDS
GATGGAGCGGAACCAGGAAT+GGG 0.549049 2_1:-2202645 None:intergenic
CTATAAGACTTTCCAATCGT+CGG 0.549342 2_1:-2202476 None:intergenic
GTAGAACCTTCACAGGATGC+TGG 0.549406 2_1:+2205561 Msa0187450:CDS
CTCTGAAGAAAATGAATCTG+TGG 0.550869 2_1:+2203118 Msa0187450:CDS
GAATTAACATCTAATTTGGA+TGG 0.554143 2_1:+2203062 Msa0187450:CDS
TCAAACTTCCAGCATATAAG+TGG 0.554512 2_1:+2203491 Msa0187450:CDS
AAGACTTTATCCTGTTCGAT+CGG 0.556191 2_1:-2204295 None:intergenic
GGTCGTACGGAATGTCAAAA+GGG 0.557243 2_1:-2202689 None:intergenic
ACCAAATTGCTCACACTGAA+GGG 0.557629 2_1:-2206712 None:intergenic
TTTGCTTTATGACTCTGCGC+TGG 0.557798 2_1:+2201765 Msa0187450:CDS
GGGAAGAGTTATCAAAGAGA+AGG 0.557918 2_1:+2201300 Msa0187450:five_prime_UTR
CCACTTCACCAGTGGGTGAA+CGG 0.558745 2_1:-2205689 None:intergenic
CATGGTGAAGCGGAAGAAGA+TGG 0.559187 2_1:+2202330 Msa0187450:CDS
TCACTTCTGATCGGTAGGAC+TGG 0.561391 2_1:-2203331 None:intergenic
AGATATAAGCTGTTCTGCTG+AGG 0.561512 2_1:-2203561 None:intergenic
GACATGTAGCCCTCTGCTGA+AGG 0.561821 2_1:-2205783 None:intergenic
ATCTGGCTTCAATGACTGGA+AGG 0.562067 2_1:-2206172 None:intergenic
GGCACTTCCAATGATGGAGT+TGG 0.562093 2_1:+2205582 Msa0187450:CDS
AAGTCTTATAGCTAGGAGAA+TGG 0.562545 2_1:+2202488 Msa0187450:CDS
AAAATATCTGAAGATAATCA+AGG 0.563038 2_1:+2206224 Msa0187450:CDS
GATTGGAAAGTCTTATAGCT+AGG 0.566470 2_1:+2202481 Msa0187450:CDS
TTGTCAAGTTCCAGGGAGCA+AGG 0.566942 2_1:+2204319 Msa0187450:CDS
GATGAATCTTATGCTGGCAT+GGG 0.566948 2_1:+2202615 Msa0187450:CDS
GATTCTTATCCAGATCTTGG+TGG 0.568851 2_1:-2204354 None:intergenic
GATAGGAGTGAGGATGATCA+TGG 0.570111 2_1:+2201742 Msa0187450:CDS
CGTTGAAGAAGCGAGTTTGG+TGG 0.571323 2_1:+2201708 Msa0187450:CDS
GTTTCTGTTGAGGCTGGTCA+TGG 0.571762 2_1:+2203086 Msa0187450:CDS
TGCAGCATCAGAACCATCAC+GGG 0.572842 2_1:-2202229 None:intergenic
TTGGCTGCCCAAAACTGAGA+AGG 0.572888 2_1:-2201531 None:intergenic
AGTGGAAGATCCTTCTGAGA+TGG 0.573204 2_1:+2203202 Msa0187450:CDS
ACCAGAAATCAAGGATATGT+GGG 0.574125 2_1:-2200938 None:intergenic
TGAGGATTCAGGGTCTGATA+GGG 0.574773 2_1:+2202104 Msa0187450:CDS
GCATGGGACCTTCAGTATTG+GGG 0.575345 2_1:+2202811 Msa0187450:CDS
TCGGAAAAGGAACCCAGAAA+CGG 0.578020 2_1:-2206868 None:intergenic
AGCCTCTTCCGAACTGCATG+CGG 0.578260 2_1:+2203736 Msa0187450:CDS
GATCCTTAATTGTACTCGGA+AGG 0.578783 2_1:-2206103 None:intergenic
TTCATCTATGCATGCATTAG+GGG 0.579205 2_1:+2204204 Msa0187450:CDS
CCATCACGGGACAAATGAGC+AGG 0.579312 2_1:-2202216 None:intergenic
TGTGTTTGTATCTGAAAGGA+TGG 0.579824 2_1:+2202872 Msa0187450:CDS
AACTTCAACCCAAACTTCAG+TGG 0.580356 2_1:+2203430 Msa0187450:CDS
GTCGTCACTTGAAACAACTT+CGG 0.580846 2_1:-2201905 None:intergenic
AGTCTTGTTGTCAAGTTCCA+GGG 0.580870 2_1:+2204312 Msa0187450:CDS
ATCTGAAAGGATGGTTTCGG+AGG 0.582768 2_1:+2202881 Msa0187450:CDS
AAACTGGAAGCAAATGAAGA+TGG 0.582852 2_1:+2206287 Msa0187450:CDS
GGGGCATCTACATCTAAAAG+TGG 0.584034 2_1:-2202189 None:intergenic
ATGAGAGGAAATTAAGTGAA+CGG 0.584291 2_1:+2203021 Msa0187450:CDS
ATGTCAAAAGGGTTTCGTCT+AGG 0.585205 2_1:-2202678 None:intergenic
GAAATAGGCGCAACATTAGA+GGG 0.585354 2_1:-2202564 None:intergenic
GGATAAAATTCCATCTCAGA+AGG 0.586560 2_1:-2203212 None:intergenic
GGGTTTGATTCATTTAAGGA+AGG 0.590242 2_1:+2202015 Msa0187450:CDS
GAAGAGGAAGAAGCAATGGA+GGG 0.590317 2_1:+2202360 Msa0187450:CDS
AAAACAGTTCTTATGCAAAG+AGG 0.592684 2_1:-2206902 None:intergenic
CATTGGAATGATGTCAGCCA+TGG 0.593113 2_1:-2202151 None:intergenic
ATAAGCTGTTCTGCTGAGGG+TGG 0.593673 2_1:-2203557 None:intergenic
GAATGTATGTGTTATGACAT+TGG 0.593928 2_1:-2200845 None:intergenic
GATATAAGCTGTTCTGCTGA+GGG 0.595064 2_1:-2203560 None:intergenic
GTGATGAAAATCAGAAGCCA+CGG 0.596481 2_1:-2204167 None:intergenic
TGGCTGCCCAAAACTGAGAA+GGG 0.598305 2_1:-2201530 None:intergenic
AGTCACAGAAGAGATCATAA+CGG 0.600400 2_1:-2205640 None:intergenic
CAGTCATAAACTGGTACCAG+TGG 0.600828 2_1:-2203530 None:intergenic
TTCCAAATCCACTTCACCAG+TGG 0.601007 2_1:-2205697 None:intergenic
GGGTGGAGCTCATCAAGCAT+TGG 0.602110 2_1:-2202168 None:intergenic
CTCATCTCTATCAGAAACAA+TGG 0.603541 2_1:-2201632 None:intergenic
AGGGCAAGGAAGTTCATGAC+GGG 0.603681 2_1:+2201872 Msa0187450:CDS
GTCAATCACTTCTGATCGGT+AGG 0.604561 2_1:-2203336 None:intergenic
TGATCAAAATAGACCTGCAA+GGG 0.604933 2_1:+2203853 Msa0187450:CDS
TCGCTCAAAATGACTTCTCT+CGG 0.605152 2_1:-2206484 None:intergenic
TTGAAACAACTTCGGATGTG+AGG 0.605383 2_1:-2201897 None:intergenic
ACCCGTTTCCAAGATGAACT+GGG 0.605587 2_1:-2202054 None:intergenic
AAACTTAATTCCTTCAGCAG+AGG 0.606614 2_1:+2205773 Msa0187450:CDS
TCCAAATCCACTTCACCAGT+GGG 0.608186 2_1:-2205696 None:intergenic
TTGATCAAAATAGACCTGCA+AGG 0.609906 2_1:+2203852 Msa0187450:CDS
TATTGAAAATCATGGTGAAG+CGG 0.609946 2_1:+2202320 Msa0187450:CDS
AGTCGATACTACTGCTGATG+TGG 0.610438 2_1:+2203646 Msa0187450:CDS
GTAGTATCGACTGAGACAGT+AGG 0.610894 2_1:-2203635 None:intergenic
TACCATTAGCCAAGACCCCA+TGG 0.612002 2_1:-2206593 None:intergenic
AGATGAAATGCCAGATTCCG+TGG 0.613020 2_1:+2204150 Msa0187450:CDS
TAAGCTGTTCTGCTGAGGGT+GGG 0.613443 2_1:-2203556 None:intergenic
CCAGCATATAAGTGGTGAGG+TGG 0.614631 2_1:+2203499 Msa0187450:CDS
GAGGAAGAAGCAATGGAGGG+TGG 0.617795 2_1:+2202363 Msa0187450:CDS
AGAAGTGATATTGAAGAGAG+TGG 0.618500 2_1:+2201685 Msa0187450:CDS
GTTGAAGAAGCGAGTTTGGT+GGG 0.618570 2_1:+2201709 Msa0187450:CDS
CAGTTCATCTTGGAAACGGG+TGG 0.621234 2_1:+2202056 Msa0187450:CDS
TTAGATATCCCCAATACTGA+AGG 0.622720 2_1:-2202819 None:intergenic
TTCAACCCGAACTTCAGTCG+AGG 0.624715 2_1:+2203466 Msa0187450:CDS
ATGCAGCATCAGAACCATCA+CGG 0.624845 2_1:-2202230 None:intergenic
GAAGTGCCAGCATCCTGTGA+AGG 0.626948 2_1:-2205567 None:intergenic
CGCAACATTAGAGGGAACAT+CGG 0.628270 2_1:-2202556 None:intergenic
TCAACTTAGTTCACTGCCTG+AGG 0.630538 2_1:+2205959 Msa0187450:CDS
GGAGCGGAACCAGGAATGGG+TGG 0.630834 2_1:-2202642 None:intergenic
TTCAACCCAAACTTCAGTGG+AGG 0.630846 2_1:+2203433 Msa0187450:CDS
CGACGAGCAATTCAATGATG+GGG 0.631025 2_1:+2203256 Msa0187450:CDS
TATTGAGAAACAGTATGTCA+TGG 0.631572 2_1:+2201933 Msa0187450:CDS
AGTCATAAACTGGTACCAGT+GGG 0.632600 2_1:-2203529 None:intergenic
TCAGTACAATGTTACTGCAG+AGG 0.633692 2_1:+2203802 Msa0187450:CDS
GAAACGAGCAGAACTCCAGT+TGG 0.634788 2_1:+2206356 Msa0187450:CDS
GTTCAGGTGATCAGGATGAG+AGG 0.634982 2_1:+2203006 Msa0187450:CDS
GCATGAGAACGAAGTAAAAG+GGG 0.635965 2_1:+2201813 Msa0187450:CDS
TAGGGCGGAGAGTTCTTCAC+CGG 0.636324 2_1:+2202122 Msa0187450:CDS
GGGCATCTACATCTAAAAGT+GGG 0.637297 2_1:-2202188 None:intergenic
GATTGACGACATACCTGATG+AGG 0.638457 2_1:+2203352 Msa0187450:CDS
TGTTGCTGAATCAGAAGACA+AGG 0.639181 2_1:-2203591 None:intergenic
AGCAATGGAGGGTGGCCAAG+AGG 0.641559 2_1:+2202371 Msa0187450:CDS
CATCTACATCTAAAAGTGGG+TGG 0.644161 2_1:-2202185 None:intergenic
GCACTATTTCATCTTCATCA+CGG 0.645125 2_1:-2203172 None:intergenic
TGTCGTCAATCACTTCTGAT+CGG 0.645572 2_1:-2203340 None:intergenic
TCTGAAAGGATGGTTTCGGA+GGG 0.646637 2_1:+2202882 Msa0187450:CDS
ATCCTTTCAGATACAAACAC+AGG 0.649789 2_1:-2202870 None:intergenic
TGTTAAAGATGATAGGAGTG+AGG 0.651600 2_1:+2201732 Msa0187450:CDS
TGCCAGCATAAGATTCATCA+GGG 0.652519 2_1:-2202611 None:intergenic
AAGGAAGAGAGAGTTACTCA+TGG 0.654060 2_1:+2201571 Msa0187450:CDS
GGAAGTTTATAAGCATCATG+GGG 0.655001 2_1:+2205716 Msa0187450:CDS
CACTGATGAAGACGACTCTG+AGG 0.655307 2_1:+2202086 Msa0187450:CDS
AGCCTGTGTTTGTATCTGAA+AGG 0.656712 2_1:+2202868 Msa0187450:CDS
CTTCCAGCATATAAGTGGTG+AGG 0.659771 2_1:+2203496 Msa0187450:CDS
TGATGAATCTAGAGATCACG+TGG 0.660170 2_1:+2206136 Msa0187450:CDS
TATGTTGGATAATGAGTCTG+TGG 0.662664 2_1:+2204057 Msa0187450:CDS
AAGGGCAAGGAAGTTCATGA+CGG 0.664816 2_1:+2201871 Msa0187450:CDS
GGATTCAGGGTCTGATAGGG+CGG 0.669574 2_1:+2202107 Msa0187450:CDS
ATCTGCTATCAAGTGGACAG+AGG 0.673753 2_1:+2202404 Msa0187450:CDS
AGGCTGTAGAATAGATGGAG+CGG 0.674409 2_1:-2202658 None:intergenic
TGGGGATATCTAAGCAAGAG+AGG 0.674635 2_1:+2202829 Msa0187450:CDS
GAGAATGGGAAAGCTCGGGG+AGG 0.676413 2_1:+2201991 Msa0187450:CDS
AAGACCCCATGGTACTTCCG+AGG 0.676543 2_1:-2206582 None:intergenic
ATTGAGAATGGGAAAGCTCG+GGG 0.677593 2_1:+2201988 Msa0187450:CDS
AATGCTTCATCAAGACAATG+TGG 0.677719 2_1:+2203991 Msa0187450:CDS
GGACAAATGAGCAGGCTGTG+GGG 0.684535 2_1:-2202208 None:intergenic
TTATAGCTAGGAGAATGGCA+AGG 0.684879 2_1:+2202493 Msa0187450:CDS
TGAGGTGGAAGAGACCCCAC+TGG 0.690480 2_1:+2203514 Msa0187450:CDS
AGGGAACAAGCTATTTCCAG+AGG 0.691282 2_1:+2202901 Msa0187450:CDS
TTATATGAAGGATATTGACG+AGG 0.699799 2_1:+2205839 Msa0187450:CDS
GTTGGATAATGAGTCTGTGG+AGG 0.700744 2_1:+2204060 Msa0187450:CDS
GATGAAGATGAAATAGTGCT+CGG 0.703578 2_1:+2203176 Msa0187450:CDS
AGTGGGTGAACGGAATTCAG+GGG 0.711324 2_1:-2205679 None:intergenic
GTCATAAACTGGTACCAGTG+GGG 0.715616 2_1:-2203528 None:intergenic
CAAGCCCAATGACAAACTGG+AGG 0.720413 2_1:+2203682 Msa0187450:CDS
CTAGCCTCGGAAGTACCATG+GGG 0.726729 2_1:+2206578 Msa0187450:three_prime_UTR
GAAGATGAAATAGTGCTCGG+TGG 0.744614 2_1:+2203179 Msa0187450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAGAAAAAAAATTA+TGG + chr2_1:2204661-2204680 Msa0187450:intron 10.0%
!! CTAATATATTTAAATCTATA+TGG + chr2_1:2204880-2204899 Msa0187450:intron 10.0%
!! TTATAATTTGATTATAGAAA+CGG + chr2_1:2206811-2206830 Msa0187450:three_prime_UTR 10.0%
!!! TCTATGTATATTTTTTTGTT+TGG - chr2_1:2200902-2200921 None:intergenic 15.0%
!! ATAATCAATTATGGAATAAA+GGG - chr2_1:2201013-2201032 None:intergenic 15.0%
!!! TCTAATTTTTATTTGATTTC+AGG + chr2_1:2201066-2201085 Msa0187450:intron 15.0%
!!! CTAATTTTTATTTGATTTCA+GGG + chr2_1:2201067-2201086 Msa0187450:intron 15.0%
!!! ATATTTTTGAAATTGAGAAT+GGG + chr2_1:2201977-2201996 Msa0187450:CDS 15.0%
!! AAACATTAATCTCTATTTAT+AGG + chr2_1:2204724-2204743 Msa0187450:intron 15.0%
!!! TTGAAATTTTCTTCATTATT+CGG - chr2_1:2205810-2205829 None:intergenic 15.0%
!! TATACATAGAAAAAAAACAG+AGG + chr2_1:2200912-2200931 Msa0187450:five_prime_UTR 20.0%
!! CATAATCAATTATGGAATAA+AGG - chr2_1:2201014-2201033 None:intergenic 20.0%
!!! TTAGCTTTTATTTCCTTTTA+TGG + chr2_1:2201190-2201209 Msa0187450:intron 20.0%
!!! GATATTTTTGAAATTGAGAA+TGG + chr2_1:2201976-2201995 Msa0187450:CDS 20.0%
!!! ATCAAAAAGATGCATTTTTT+CGG + chr2_1:2202772-2202791 Msa0187450:CDS 20.0%
!!! ATGATAATGATTGAGTAATA+TGG + chr2_1:2204796-2204815 Msa0187450:intron 20.0%
!! ATTTAAATCTATATGGAATC+TGG + chr2_1:2204887-2204906 Msa0187450:intron 20.0%
!! AATGAAAGAACAAATTATTC+CGG - chr2_1:2205400-2205419 None:intergenic 20.0%
!!! AATTTATGATCAGTTCTTTT+TGG - chr2_1:2205507-2205526 None:intergenic 20.0%
!! CAATGAATTTGATTATATGA+AGG + chr2_1:2205827-2205846 Msa0187450:CDS 20.0%
!! AAAATATCTGAAGATAATCA+AGG + chr2_1:2206224-2206243 Msa0187450:CDS 20.0%
!! TAAATAAGACAAAACTCTTT+CGG - chr2_1:2206511-2206530 None:intergenic 20.0%
!!! TTGTTTTGAGTTTTTTTCTT+CGG + chr2_1:2206533-2206552 Msa0187450:three_prime_UTR 20.0%
!!! TTTCTATAATTTTGATGGAT+TGG + chr2_1:2206627-2206646 Msa0187450:three_prime_UTR 20.0%
!! AGCAATTTGGTATATATTTA+GGG + chr2_1:2206724-2206743 Msa0187450:three_prime_UTR 20.0%
!!! ACAAAAAATCCAATTTCTTT+TGG - chr2_1:2206788-2206807 None:intergenic 20.0%
! GATCATAGCATAATCAATTA+TGG - chr2_1:2201022-2201041 None:intergenic 25.0%
!!! TTTTATTTGATTTCAGGGAT+TGG + chr2_1:2201072-2201091 Msa0187450:intron 25.0%
!!! TGTCATTCATTTTGATTCAT+TGG + chr2_1:2201114-2201133 Msa0187450:five_prime_UTR 25.0%
! ATCATCAATAGTTCCATAAA+AGG - chr2_1:2201206-2201225 None:intergenic 25.0%
!! TTTTATGGAACTATTGATGA+TGG + chr2_1:2201205-2201224 Msa0187450:intron 25.0%
! ATCAACCATAAACAAACAAA+AGG - chr2_1:2201255-2201274 None:intergenic 25.0%
! AAAAAACAGGATTTAGCTAA+GGG + chr2_1:2201280-2201299 Msa0187450:intron 25.0%
! TTGAAATTGGAATCAAAGTT+AGG + chr2_1:2201338-2201357 Msa0187450:CDS 25.0%
!!! TTTGTTTTCATTTCAATCAG+AGG + chr2_1:2201364-2201383 Msa0187450:CDS 25.0%
!! TTGTTTTCATTTCAATCAGA+GGG + chr2_1:2201365-2201384 Msa0187450:CDS 25.0%
!!! TCCTTTTTTGTTTTCTGTTT+TGG + chr2_1:2201462-2201481 Msa0187450:CDS 25.0%
! ACCAAAACAGAAAACAAAAA+AGG - chr2_1:2201466-2201485 None:intergenic 25.0%
!!! GAATTACATAGTTTTGACTT+AGG + chr2_1:2201847-2201866 Msa0187450:CDS 25.0%
! GATGAAGATATTGAAAATCA+TGG + chr2_1:2202312-2202331 Msa0187450:CDS 25.0%
! GACTGAATTAACATCTAATT+TGG + chr2_1:2203058-2203077 Msa0187450:CDS 25.0%
! GAATTAACATCTAATTTGGA+TGG + chr2_1:2203062-2203081 Msa0187450:CDS 25.0%
!!! CTATTTTGATCAACAAAACT+TGG - chr2_1:2203845-2203864 None:intergenic 25.0%
! TTCTGATAAGTTACATATGT+TGG + chr2_1:2204042-2204061 Msa0187450:CDS 25.0%
!! TCTAGTTTAGATACTTCATT+GGG - chr2_1:2204097-2204116 None:intergenic 25.0%
!! ATCTAGTTTAGATACTTCAT+TGG - chr2_1:2204098-2204117 None:intergenic 25.0%
! CAGAACATTTAGAGAAAAAT+TGG + chr2_1:2204251-2204270 Msa0187450:CDS 25.0%
!! TTTAAGGTTCCATATGATTA+AGG + chr2_1:2204475-2204494 Msa0187450:intron 25.0%
!! TGTGATTTTCCTTAATCATA+TGG - chr2_1:2204487-2204506 None:intergenic 25.0%
! TCAACAAGAATATTATCAGT+AGG - chr2_1:2204609-2204628 None:intergenic 25.0%
!! GAGATTAATGTTTACTCTTT+TGG - chr2_1:2204717-2204736 None:intergenic 25.0%
! AGATACATAAGATTAGAAAC+TGG + chr2_1:2204843-2204862 Msa0187450:intron 25.0%
! CAATACAGTTGCAATATTAA+TGG - chr2_1:2204983-2205002 None:intergenic 25.0%
! CATTAATATTGCAACTGTAT+TGG + chr2_1:2204981-2205000 Msa0187450:intron 25.0%
! CTTGAAAAATGTTCATTCAT+TGG - chr2_1:2205034-2205053 None:intergenic 25.0%
! AAAGATCAAGAAAAGACAAA+GGG - chr2_1:2205061-2205080 None:intergenic 25.0%
! AAAAGATCAAGAAAAGACAA+AGG - chr2_1:2205062-2205081 None:intergenic 25.0%
! AGATAGGTTGTTCTTTAATT+TGG + chr2_1:2205176-2205195 Msa0187450:intron 25.0%
! TATTTGCTTGATTCATCTTT+CGG - chr2_1:2205242-2205261 None:intergenic 25.0%
!! TCAGGTTTCTATAATTTTGA+TGG + chr2_1:2206622-2206641 Msa0187450:three_prime_UTR 25.0%
! GAGCAATTTGGTATATATTT+AGG + chr2_1:2206723-2206742 Msa0187450:three_prime_UTR 25.0%
! CAAAGAGGAAAAAAATAAGT+CGG - chr2_1:2206890-2206909 None:intergenic 25.0%
! TTTGAAAAAAGAGAGAGTGT+GGG - chr2_1:2200807-2200826 None:intergenic 30.0%
!!! CTCTTTTTTCAAACCAACAA+AGG + chr2_1:2200814-2200833 Msa0187450:five_prime_UTR 30.0%
GAATGTATGTGTTATGACAT+TGG - chr2_1:2200848-2200867 None:intergenic 30.0%
TAAAGGGTCATCAAATATGA+AGG - chr2_1:2200997-2201016 None:intergenic 30.0%
!!! ATTTTGATTCATTGGTGTTG+AGG + chr2_1:2201122-2201141 Msa0187450:five_prime_UTR 30.0%
!! GGTATCCTTTTGTTTGTTTA+TGG + chr2_1:2201247-2201266 Msa0187450:intron 30.0%
!! TGGTTGATGAATCAAAAAAC+AGG + chr2_1:2201267-2201286 Msa0187450:intron 30.0%
CAAAAAACAGGATTTAGCTA+AGG + chr2_1:2201279-2201298 Msa0187450:intron 30.0%
! TGTTTTCATTTCAATCAGAG+GGG + chr2_1:2201366-2201385 Msa0187450:CDS 30.0%
CCTAAAAAACCCAAAAGAAA+TGG - chr2_1:2201415-2201434 None:intergenic 30.0%
!!! CCATTTCTTTTGGGTTTTTT+AGG + chr2_1:2201412-2201431 Msa0187450:CDS 30.0%
!!! ACATAGTTTTGACTTAGGAA+AGG + chr2_1:2201852-2201871 Msa0187450:CDS 30.0%
!!! CATAGTTTTGACTTAGGAAA+GGG + chr2_1:2201853-2201872 Msa0187450:CDS 30.0%
TATTGAGAAACAGTATGTCA+TGG + chr2_1:2201933-2201952 Msa0187450:CDS 30.0%
TATTGAAAATCATGGTGAAG+CGG + chr2_1:2202320-2202339 Msa0187450:CDS 30.0%
AAAGTAAATCTGCTATCAAG+TGG + chr2_1:2202397-2202416 Msa0187450:CDS 30.0%
CAAAAGAATCTTATGGATCT+GGG + chr2_1:2202432-2202451 Msa0187450:CDS 30.0%
ATTCATCAGGGAAATCAAAA+GGG - chr2_1:2202602-2202621 None:intergenic 30.0%
AAGAGAAACCTGATCTTAAA+AGG + chr2_1:2202718-2202737 Msa0187450:CDS 30.0%
AGAGAAACCTGATCTTAAAA+GGG + chr2_1:2202719-2202738 Msa0187450:CDS 30.0%
!!! AAAAAGATGCATTTTTTCGG+AGG + chr2_1:2202775-2202794 Msa0187450:CDS 30.0%
! AAGAGAGGCATGATATTAAT+TGG + chr2_1:2202844-2202863 Msa0187450:CDS 30.0%
ATGAGAGGAAATTAAGTGAA+CGG + chr2_1:2203021-2203040 Msa0187450:CDS 30.0%
TTAGATGTTAATTCAGTCTC+TGG - chr2_1:2203056-2203075 None:intergenic 30.0%
ATCTATATCTTCAGATTCCT+CGG - chr2_1:2203783-2203802 None:intergenic 30.0%
TGCATAGATGAACTATTAGA+AGG - chr2_1:2204196-2204215 None:intergenic 30.0%
!! TCTAAATGTTCTGTTTCTAC+TGG - chr2_1:2204244-2204263 None:intergenic 30.0%
! CTTGAACTTCTTTTGCTTTA+AGG + chr2_1:2204459-2204478 Msa0187450:intron 30.0%
TGCTTGGGTTAAAAAAGAAT+AGG - chr2_1:2204561-2204580 None:intergenic 30.0%
!!! TCTTTTTTAACCCAAGCAAT+TGG + chr2_1:2204563-2204582 Msa0187450:intron 30.0%
ACAAGAATATTATCAGTAGG+AGG - chr2_1:2204606-2204625 None:intergenic 30.0%
! TTCTTGTTGAAGTTGAGTTT+TGG + chr2_1:2204619-2204638 Msa0187450:intron 30.0%
ACTCCTAATCCTAAATTAGT+AGG + chr2_1:2204755-2204774 Msa0187450:intron 30.0%
CTCCTAATCCTAAATTAGTA+GGG + chr2_1:2204756-2204775 Msa0187450:intron 30.0%
! TTCCCTACTAATTTAGGATT+AGG - chr2_1:2204761-2204780 None:intergenic 30.0%
TCCTAAATTAGTAGGGAAAT+CGG + chr2_1:2204763-2204782 Msa0187450:intron 30.0%
TCATTGGAAATCAAAATCTG+AGG - chr2_1:2205018-2205037 None:intergenic 30.0%
ATAATAACAGAAAACACAGC+TGG - chr2_1:2205353-2205372 None:intergenic 30.0%
TTGGAAGTTTATAAGCATCA+TGG + chr2_1:2205714-2205733 Msa0187450:CDS 30.0%
TGGAAGTTTATAAGCATCAT+GGG + chr2_1:2205715-2205734 Msa0187450:CDS 30.0%
!!! AGTTTTGTTGTGCTTCATTT+TGG - chr2_1:2205758-2205777 None:intergenic 30.0%
TTATATGAAGGATATTGACG+AGG + chr2_1:2205839-2205858 Msa0187450:CDS 30.0%
AGCAACATCAATATCTTCTA+GGG - chr2_1:2206198-2206217 None:intergenic 30.0%
AAGCAACATCAATATCTTCT+AGG - chr2_1:2206199-2206218 None:intergenic 30.0%
GAATCATTTGATGTATCAAC+CGG + chr2_1:2206326-2206345 Msa0187450:CDS 30.0%
! ACATTTTCCAATTTACCAAC+TGG - chr2_1:2206374-2206393 None:intergenic 30.0%
TTGGAAAATGTATCCATTAG+CGG + chr2_1:2206383-2206402 Msa0187450:CDS 30.0%
ATAAGGAAAAATCTCACAGT+AGG + chr2_1:2206414-2206433 Msa0187450:CDS 30.0%
!!! TGAGTTTTTTTCTTCGGAAA+TGG + chr2_1:2206539-2206558 Msa0187450:three_prime_UTR 30.0%
!!! GAGTTTTTTTCTTCGGAAAT+GGG + chr2_1:2206540-2206559 Msa0187450:three_prime_UTR 30.0%
! GTTTCTTCAAGAATGAGTTT+TGG + chr2_1:2206649-2206668 Msa0187450:three_prime_UTR 30.0%
TTGTGTAGTCCAAAAGAAAT+TGG + chr2_1:2206776-2206795 Msa0187450:three_prime_UTR 30.0%
GGAAAAAAATAAGTCGGAAA+AGG - chr2_1:2206884-2206903 None:intergenic 30.0%
! TTGAAAAAAGAGAGAGTGTG+GGG - chr2_1:2200806-2200825 None:intergenic 35.0%
GTTTGAAAAAAGAGAGAGTG+TGG - chr2_1:2200808-2200827 None:intergenic 35.0%
ATTGGATATGTGACCTTTGT+TGG - chr2_1:2200830-2200849 None:intergenic 35.0%
ACCAGAAATCAAGGATATGT+GGG - chr2_1:2200941-2200960 None:intergenic 35.0%
AAAAGACTCACCAGAAATCA+AGG - chr2_1:2200950-2200969 None:intergenic 35.0%
!! AACTATTGATGATGGATCAC+TGG + chr2_1:2201213-2201232 Msa0187450:intron 35.0%
!! TGGATCACTGGATCTTATTT+TGG + chr2_1:2201225-2201244 Msa0187450:intron 35.0%
!!! GGATCACTGGATCTTATTTT+GGG + chr2_1:2201226-2201245 Msa0187450:intron 35.0%
AGTTATCAAAGAGAAGGAGA+TGG + chr2_1:2201306-2201325 Msa0187450:exon 35.0%
GTTATCAAAGAGAAGGAGAT+GGG + chr2_1:2201307-2201326 Msa0187450:exon 35.0%
ATGGGATCAGTGATTGAAAT+TGG + chr2_1:2201325-2201344 Msa0187450:CDS 35.0%
! TTGCCATCATCCATTTCTTT+TGG + chr2_1:2201402-2201421 Msa0187450:CDS 35.0%
! TGCCATCATCCATTTCTTTT+GGG + chr2_1:2201403-2201422 Msa0187450:CDS 35.0%
AACCCAAAAGAAATGGATGA+TGG - chr2_1:2201408-2201427 None:intergenic 35.0%
! TTTTCAAACTCAGGCACATT+TGG - chr2_1:2201553-2201572 None:intergenic 35.0%
AAATGTGCCTGAGTTTGAAA+AGG + chr2_1:2201552-2201571 Msa0187450:CDS 35.0%
! GTCGTTTCAAACTGGATTTT+CGG + chr2_1:2201600-2201619 Msa0187450:CDS 35.0%
! TTTCAAACTGGATTTTCGGA+GGG + chr2_1:2201604-2201623 Msa0187450:CDS 35.0%
CTCATCTCTATCAGAAACAA+TGG - chr2_1:2201635-2201654 None:intergenic 35.0%
AGAAGTGATATTGAAGAGAG+TGG + chr2_1:2201685-2201704 Msa0187450:CDS 35.0%
TGTTAAAGATGATAGGAGTG+AGG + chr2_1:2201732-2201751 Msa0187450:CDS 35.0%
AGCATGAGAACGAAGTAAAA+GGG + chr2_1:2201812-2201831 Msa0187450:CDS 35.0%
AAGTAAAAGGGGATGTAGAA+AGG + chr2_1:2201824-2201843 Msa0187450:CDS 35.0%
AGTAAAAGGGGATGTAGAAA+GGG + chr2_1:2201825-2201844 Msa0187450:CDS 35.0%
AAATTGAGAATGGGAAAGCT+CGG + chr2_1:2201986-2202005 Msa0187450:CDS 35.0%
GGGTTTGATTCATTTAAGGA+AGG + chr2_1:2202015-2202034 Msa0187450:CDS 35.0%
CAGATTTACTTTCATCCTCT+TGG - chr2_1:2202389-2202408 None:intergenic 35.0%
GGATGACCAAAAGAATCTTA+TGG + chr2_1:2202425-2202444 Msa0187450:CDS 35.0%
! CCAGATCCATAAGATTCTTT+TGG - chr2_1:2202434-2202453 None:intergenic 35.0%
CCAAAAGAATCTTATGGATC+TGG + chr2_1:2202431-2202450 Msa0187450:CDS 35.0%
CTATAAGACTTTCCAATCGT+CGG - chr2_1:2202479-2202498 None:intergenic 35.0%
! GATTGGAAAGTCTTATAGCT+AGG + chr2_1:2202481-2202500 Msa0187450:CDS 35.0%
! AAGTCTTATAGCTAGGAGAA+TGG + chr2_1:2202488-2202507 Msa0187450:CDS 35.0%
GATTCATCAGGGAAATCAAA+AGG - chr2_1:2202603-2202622 None:intergenic 35.0%
GATCAGGTTTCTCTTCATTT+GGG - chr2_1:2202713-2202732 None:intergenic 35.0%
AGATCAGGTTTCTCTTCATT+TGG - chr2_1:2202714-2202733 None:intergenic 35.0%
!!! AAACTGTCCCTTTTAAGATC+AGG - chr2_1:2202729-2202748 None:intergenic 35.0%
!! AGGCATGAAAGTTTTAGCAT+GGG + chr2_1:2202795-2202814 Msa0187450:CDS 35.0%
TTAGATATCCCCAATACTGA+AGG - chr2_1:2202822-2202841 None:intergenic 35.0%
ATCCTTTCAGATACAAACAC+AGG - chr2_1:2202873-2202892 None:intergenic 35.0%
TGTGTTTGTATCTGAAAGGA+TGG + chr2_1:2202872-2202891 Msa0187450:CDS 35.0%
TGTATCTGAAAGGATGGTTT+CGG + chr2_1:2202878-2202897 Msa0187450:CDS 35.0%
TGAGAGGAAATTAAGTGAAC+GGG + chr2_1:2203022-2203041 Msa0187450:CDS 35.0%
! CACAGATTCATTTTCTTCAG+AGG - chr2_1:2203120-2203139 None:intergenic 35.0%
! CTCTGAAGAAAATGAATCTG+TGG + chr2_1:2203118-2203137 Msa0187450:CDS 35.0%
GCACTATTTCATCTTCATCA+CGG - chr2_1:2203175-2203194 None:intergenic 35.0%
GATGAAGATGAAATAGTGCT+CGG + chr2_1:2203176-2203195 Msa0187450:CDS 35.0%
GGATAAAATTCCATCTCAGA+AGG - chr2_1:2203215-2203234 None:intergenic 35.0%
! ATGGAATTTTATCCTGCAAC+AGG + chr2_1:2203221-2203240 Msa0187450:CDS 35.0%
!!! GTTTTTTCTGATTCCTCATC+AGG - chr2_1:2203368-2203387 None:intergenic 35.0%
TCAAACTTCCAGCATATAAG+TGG + chr2_1:2203491-2203510 Msa0187450:CDS 35.0%
TTATCCTCCAGTTTGTCATT+GGG - chr2_1:2203689-2203708 None:intergenic 35.0%
ATTATCCTCCAGTTTGTCAT+TGG - chr2_1:2203690-2203709 None:intergenic 35.0%
CGGAAGTCAAAAATGAAATG+AGG + chr2_1:2203756-2203775 Msa0187450:CDS 35.0%
TTGATCAAAATAGACCTGCA+AGG + chr2_1:2203852-2203871 Msa0187450:CDS 35.0%
TGATCAAAATAGACCTGCAA+GGG + chr2_1:2203853-2203872 Msa0187450:CDS 35.0%
! TCCAACTTTTCTCTGGATAT+TGG + chr2_1:2203893-2203912 Msa0187450:CDS 35.0%
TCCAATATCCAGAGAAAAGT+TGG - chr2_1:2203897-2203916 None:intergenic 35.0%
TCTGGATATTGGATCAGAAA+AGG + chr2_1:2203904-2203923 Msa0187450:CDS 35.0%
CTGGATATTGGATCAGAAAA+GGG + chr2_1:2203905-2203924 Msa0187450:CDS 35.0%
! TTCAGGTTTGTTTCATGAAC+AGG + chr2_1:2203937-2203956 Msa0187450:CDS 35.0%
TTTCAGAATCAGCAGATATG+TGG - chr2_1:2203973-2203992 None:intergenic 35.0%
AATGCTTCATCAAGACAATG+TGG + chr2_1:2203991-2204010 Msa0187450:CDS 35.0%
TATGTTGGATAATGAGTCTG+TGG + chr2_1:2204057-2204076 Msa0187450:CDS 35.0%
AGTTCATCTATGCATGCATT+AGG + chr2_1:2204202-2204221 Msa0187450:CDS 35.0%
GTTCATCTATGCATGCATTA+GGG + chr2_1:2204203-2204222 Msa0187450:CDS 35.0%
TTCATCTATGCATGCATTAG+GGG + chr2_1:2204204-2204223 Msa0187450:CDS 35.0%
AAGACTTTATCCTGTTCGAT+CGG - chr2_1:2204298-2204317 None:intergenic 35.0%
GATGATTCTTATCCAGATCT+TGG - chr2_1:2204360-2204379 None:intergenic 35.0%
! TCTGTCAAGCTCTGATAAAT+TGG + chr2_1:2204378-2204397 Msa0187450:CDS 35.0%
! ACCGATTTCCCTACTAATTT+AGG - chr2_1:2204767-2204786 None:intergenic 35.0%
TAATATGGAAACTGATCCTG+CGG + chr2_1:2204811-2204830 Msa0187450:intron 35.0%
! TAAGATTAGAAACTGGTCTG+AGG + chr2_1:2204850-2204869 Msa0187450:intron 35.0%
CCTATTGAATTGGGATTTCT+GGG - chr2_1:2205148-2205167 None:intergenic 35.0%
! TGATGCTAGCCTATTGAATT+GGG - chr2_1:2205157-2205176 None:intergenic 35.0%
AGCAAATAGATGTCAAACAG+AGG + chr2_1:2205254-2205273 Msa0187450:intron 35.0%
! CATGCACATGATTGATAATC+CGG + chr2_1:2205378-2205397 Msa0187450:intron 35.0%
!! CATTTGTTTGGTGTAAAGTG+AGG + chr2_1:2205455-2205474 Msa0187450:intron 35.0%
GCAGAATTCTGATAACATTC+TGG + chr2_1:2205539-2205558 Msa0187450:intron 35.0%
! CATAACGGGAGTTTCATATA+AGG - chr2_1:2205628-2205647 None:intergenic 35.0%
AGTCACAGAAGAGATCATAA+CGG - chr2_1:2205643-2205662 None:intergenic 35.0%
GGAAGTTTATAAGCATCATG+GGG + chr2_1:2205716-2205735 Msa0187450:CDS 35.0%
AAACTTAATTCCTTCAGCAG+AGG + chr2_1:2205773-2205792 Msa0187450:CDS 35.0%
AACTTAATTCCTTCAGCAGA+GGG + chr2_1:2205774-2205793 Msa0187450:CDS 35.0%
AGTGATCTTACTTCAAGAAC+TGG - chr2_1:2206023-2206042 None:intergenic 35.0%
! GCTTTTAAGCAACTTCAAGA+AGG + chr2_1:2206059-2206078 Msa0187450:CDS 35.0%
AGCTGATCCTTAATTGTACT+CGG - chr2_1:2206110-2206129 None:intergenic 35.0%
! ATCAATATCTTCTAGGGATC+TGG - chr2_1:2206192-2206211 None:intergenic 35.0%
!!! TCTTCTGCATCTCTTTTTTC+TGG - chr2_1:2206257-2206276 None:intergenic 35.0%
AAACTGGAAGCAAATGAAGA+TGG + chr2_1:2206287-2206306 Msa0187450:CDS 35.0%
! TTTGAGTTTCTTTCTAGCCT+CGG + chr2_1:2206565-2206584 Msa0187450:three_prime_UTR 35.0%
!!! TCTTGAAGCTTGCAGTTTTT+TGG + chr2_1:2206679-2206698 Msa0187450:three_prime_UTR 35.0%
! TTTCTTTTGGACTACACAAG+AGG - chr2_1:2206775-2206794 None:intergenic 35.0%
TCCCACATATCCTTGATTTC+TGG + chr2_1:2200937-2200956 Msa0187450:five_prime_UTR 40.0%
CACCAGAAATCAAGGATATG+TGG - chr2_1:2200942-2200961 None:intergenic 40.0%
GGGAAGAGTTATCAAAGAGA+AGG + chr2_1:2201300-2201319 Msa0187450:five_prime_UTR 40.0%
! CTCTCTTCCTTTTCAAACTC+AGG - chr2_1:2201562-2201581 None:intergenic 40.0%
AAGGAAGAGAGAGTTACTCA+TGG + chr2_1:2201571-2201590 Msa0187450:CDS 40.0%
GGTATTTCGTCGTTTCAAAC+TGG + chr2_1:2201592-2201611 Msa0187450:CDS 40.0%
! GTTTCAAACTGGATTTTCGG+AGG + chr2_1:2201603-2201622 Msa0187450:CDS 40.0%
!! GATGAGAGCTATTTTGTGAG+AGG + chr2_1:2201649-2201668 Msa0187450:CDS 40.0%
! TGGTGGGTGTTAAAGATGAT+AGG + chr2_1:2201725-2201744 Msa0187450:CDS 40.0%
CAGCATGAGAACGAAGTAAA+AGG + chr2_1:2201811-2201830 Msa0187450:CDS 40.0%
GCATGAGAACGAAGTAAAAG+GGG + chr2_1:2201813-2201832 Msa0187450:CDS 40.0%
!!! TTTTGACTTAGGAAAGGGCA+AGG + chr2_1:2201858-2201877 Msa0187450:CDS 40.0%
TTGAAACAACTTCGGATGTG+AGG - chr2_1:2201900-2201919 None:intergenic 40.0%
GTCGTCACTTGAAACAACTT+CGG - chr2_1:2201908-2201927 None:intergenic 40.0%
AATTGAGAATGGGAAAGCTC+GGG + chr2_1:2201987-2202006 Msa0187450:CDS 40.0%
! AGGCGGGTTTGATTCATTTA+AGG + chr2_1:2202011-2202030 Msa0187450:CDS 40.0%
ATTGTTCACCCAGTTCATCT+TGG + chr2_1:2202046-2202065 Msa0187450:CDS 40.0%
CATCTACATCTAAAAGTGGG+TGG - chr2_1:2202188-2202207 None:intergenic 40.0%
GGGCATCTACATCTAAAAGT+GGG - chr2_1:2202191-2202210 None:intergenic 40.0%
!!! GTCGCTTTTCTGAGATTTCT+CGG - chr2_1:2202256-2202275 None:intergenic 40.0%
!! AGAAGATGGTGTTGATGAAG+AGG + chr2_1:2202344-2202363 Msa0187450:CDS 40.0%
TGATGAAGAGGAAGAAGCAA+TGG + chr2_1:2202356-2202375 Msa0187450:CDS 40.0%
TCTTATGGATCTGGGAACTT+TGG + chr2_1:2202440-2202459 Msa0187450:CDS 40.0%
TTATAGCTAGGAGAATGGCA+AGG + chr2_1:2202493-2202512 Msa0187450:CDS 40.0%
GAAATAGGCGCAACATTAGA+GGG - chr2_1:2202567-2202586 None:intergenic 40.0%
AGAAATAGGCGCAACATTAG+AGG - chr2_1:2202568-2202587 None:intergenic 40.0%
GGGTTTCGTCTAACAGAAAT+AGG - chr2_1:2202582-2202601 None:intergenic 40.0%
TTCCCTGATGAATCTTATGC+TGG + chr2_1:2202609-2202628 Msa0187450:CDS 40.0%
TGCCAGCATAAGATTCATCA+GGG - chr2_1:2202614-2202633 None:intergenic 40.0%
ATGCCAGCATAAGATTCATC+AGG - chr2_1:2202615-2202634 None:intergenic 40.0%
TGATGAATCTTATGCTGGCA+TGG + chr2_1:2202614-2202633 Msa0187450:CDS 40.0%
GATGAATCTTATGCTGGCAT+GGG + chr2_1:2202615-2202634 Msa0187450:CDS 40.0%
ATGTCAAAAGGGTTTCGTCT+AGG - chr2_1:2202681-2202700 None:intergenic 40.0%
TTCTCTTCATTTGGGTCGTA+CGG - chr2_1:2202705-2202724 None:intergenic 40.0%
!! GAGGCATGAAAGTTTTAGCA+TGG + chr2_1:2202794-2202813 Msa0187450:CDS 40.0%
AGCCTGTGTTTGTATCTGAA+AGG + chr2_1:2202868-2202887 Msa0187450:CDS 40.0%
TTACTTCACTAGATTGCCTC+TGG - chr2_1:2202920-2202939 None:intergenic 40.0%
GAATCTGTGGAGATGATAGA+AGG + chr2_1:2203131-2203150 Msa0187450:CDS 40.0%
ATCGACGAGCAATTCAATGA+TGG + chr2_1:2203254-2203273 Msa0187450:CDS 40.0%
TCGACGAGCAATTCAATGAT+GGG + chr2_1:2203255-2203274 Msa0187450:CDS 40.0%
TGTCGTCAATCACTTCTGAT+CGG - chr2_1:2203343-2203362 None:intergenic 40.0%
GCAAATTTGCAGCATGAAGA+TGG + chr2_1:2203389-2203408 Msa0187450:CDS 40.0%
AACTTCAACCCAAACTTCAG+TGG + chr2_1:2203430-2203449 Msa0187450:CDS 40.0%
TGATTCCTCCACTGAAGTTT+GGG - chr2_1:2203441-2203460 None:intergenic 40.0%
TTGATTCCTCCACTGAAGTT+TGG - chr2_1:2203442-2203461 None:intergenic 40.0%
TTGATTCCTCGACTGAAGTT+CGG - chr2_1:2203475-2203494 None:intergenic 40.0%
AGTCATAAACTGGTACCAGT+GGG - chr2_1:2203532-2203551 None:intergenic 40.0%
GATATAAGCTGTTCTGCTGA+GGG - chr2_1:2203563-2203582 None:intergenic 40.0%
AGATATAAGCTGTTCTGCTG+AGG - chr2_1:2203564-2203583 None:intergenic 40.0%
TGTTGCTGAATCAGAAGACA+AGG - chr2_1:2203594-2203613 None:intergenic 40.0%
!! AGCAACAGAGTTTTCTGAGA+CGG + chr2_1:2203607-2203626 Msa0187450:CDS 40.0%
CAAAAATGAAATGAGGTCCG+AGG + chr2_1:2203763-2203782 Msa0187450:CDS 40.0%
TCAGTACAATGTTACTGCAG+AGG + chr2_1:2203802-2203821 Msa0187450:CDS 40.0%
! TGTGGATTCCAACTTTTCTC+TGG + chr2_1:2203886-2203905 Msa0187450:CDS 40.0%
! GAAAAGGGTGTAACTGATTC+AGG + chr2_1:2203920-2203939 Msa0187450:CDS 40.0%
TCCGGATTCAAACTATCATC+TGG + chr2_1:2204018-2204037 Msa0187450:CDS 40.0%
GCCAGATGATAGTTTGAATC+CGG - chr2_1:2204022-2204041 None:intergenic 40.0%
GTGATGAAAATCAGAAGCCA+CGG - chr2_1:2204170-2204189 None:intergenic 40.0%
!! AAGTCTTGTTGTCAAGTTCC+AGG + chr2_1:2204311-2204330 Msa0187450:CDS 40.0%
!! AGTCTTGTTGTCAAGTTCCA+GGG + chr2_1:2204312-2204331 Msa0187450:CDS 40.0%
! ATCCAGATCTTGGTGGATAA+TGG - chr2_1:2204350-2204369 None:intergenic 40.0%
GATTCTTATCCAGATCTTGG+TGG - chr2_1:2204357-2204376 None:intergenic 40.0%
ACAACGACTTCCAATTGCTT+GGG - chr2_1:2204576-2204595 None:intergenic 40.0%
TACAACGACTTCCAATTGCT+TGG - chr2_1:2204577-2204596 None:intergenic 40.0%
AATATGGAAACTGATCCTGC+GGG + chr2_1:2204812-2204831 Msa0187450:intron 40.0%
TGTATCTTAGATTATCCCGC+AGG - chr2_1:2204830-2204849 None:intergenic 40.0%
! AAGGCTTGGTTGTTATTGCA+CGG - chr2_1:2204925-2204944 None:intergenic 40.0%
! ATCAAAATCTGAGGTACCCT+AGG - chr2_1:2205009-2205028 None:intergenic 40.0%
! TGGGATTTCTGGGTATTCAA+GGG - chr2_1:2205138-2205157 None:intergenic 40.0%
! TTGGGATTTCTGGGTATTCA+AGG - chr2_1:2205139-2205158 None:intergenic 40.0%
CCCAGAAATCCCAATTCAAT+AGG + chr2_1:2205145-2205164 Msa0187450:intron 40.0%
GCCTATTGAATTGGGATTTC+TGG - chr2_1:2205149-2205168 None:intergenic 40.0%
! CTGATGCTAGCCTATTGAAT+TGG - chr2_1:2205158-2205177 None:intergenic 40.0%
TCAATAGGCTAGCATCAGAT+AGG + chr2_1:2205160-2205179 Msa0187450:intron 40.0%
GATGTCAAACAGAGGATACT+TGG + chr2_1:2205262-2205281 Msa0187450:intron 40.0%
CTGCTTGCATTGCATTTGTT+TGG + chr2_1:2205443-2205462 Msa0187450:intron 40.0%
CAATTCTCCAACTCCATCAT+TGG - chr2_1:2205592-2205611 None:intergenic 40.0%
GTCACAGAAGAGATCATAAC+GGG - chr2_1:2205642-2205661 None:intergenic 40.0%
CGAGGAATTCTTGTCAGAAT+TGG + chr2_1:2205857-2205876 Msa0187450:CDS 40.0%
TTGTCAGAATTGGACACAGT+TGG + chr2_1:2205867-2205886 Msa0187450:CDS 40.0%
TGTCAGAATTGGACACAGTT+GGG + chr2_1:2205868-2205887 Msa0187450:CDS 40.0%
!! ACAGTTGGGGATTTTAGTGT+CGG + chr2_1:2205882-2205901 Msa0187450:CDS 40.0%
! GAGCATCTCTAGTTTCTTCA+TGG - chr2_1:2205941-2205960 None:intergenic 40.0%
!!! TCTGCTGTTTTTACATCCTC+AGG - chr2_1:2205978-2205997 None:intergenic 40.0%
TGAGGATGTAAAAACAGCAG+AGG + chr2_1:2205977-2205996 Msa0187450:CDS 40.0%
CATCCTTCCGAGTACAATTA+AGG + chr2_1:2206100-2206119 Msa0187450:CDS 40.0%
GATCCTTAATTGTACTCGGA+AGG - chr2_1:2206106-2206125 None:intergenic 40.0%
TGATGAATCTAGAGATCACG+TGG + chr2_1:2206136-2206155 Msa0187450:CDS 40.0%
AGAAGATGCTTCAGTCAAAC+TGG + chr2_1:2206271-2206290 Msa0187450:CDS 40.0%
!! CAGAACTCCAGTTGGTAAAT+TGG + chr2_1:2206364-2206383 Msa0187450:CDS 40.0%
CTTATTACTAGAGCCGCTAA+TGG - chr2_1:2206399-2206418 None:intergenic 40.0%
! CATTAGCGGCTCTAGTAATA+AGG + chr2_1:2206397-2206416 Msa0187450:CDS 40.0%
TCGCTCAAAATGACTTCTCT+CGG - chr2_1:2206487-2206506 None:intergenic 40.0%
ACCAAATTGCTCACACTGAA+GGG - chr2_1:2206715-2206734 None:intergenic 40.0%
TACCAAATTGCTCACACTGA+AGG - chr2_1:2206716-2206735 None:intergenic 40.0%
ATACATCAAGTAGCCGTTTC+TGG + chr2_1:2206855-2206874 Msa0187450:three_prime_UTR 40.0%
TACATCAAGTAGCCGTTTCT+GGG + chr2_1:2206856-2206875 Msa0187450:three_prime_UTR 40.0%
! AAAAAAGAGAGAGTGTGGGG+CGG - chr2_1:2200803-2200822 None:intergenic 45.0%
AGAGCAGTGCAGACTAAAAC+AGG - chr2_1:2201499-2201518 None:intergenic 45.0%
! TTGGGACCCTTCTCAGTTTT+GGG + chr2_1:2201524-2201543 Msa0187450:CDS 45.0%
GTTGAAGAAGCGAGTTTGGT+GGG + chr2_1:2201709-2201728 Msa0187450:CDS 45.0%
GATAGGAGTGAGGATGATCA+TGG + chr2_1:2201742-2201761 Msa0187450:CDS 45.0%
TTTGCTTTATGACTCTGCGC+TGG + chr2_1:2201765-2201784 Msa0187450:CDS 45.0%
!! GCTGGATGATGTTAACTTGC+AGG + chr2_1:2201783-2201802 Msa0187450:CDS 45.0%
AAGGGCAAGGAAGTTCATGA+CGG + chr2_1:2201871-2201890 Msa0187450:CDS 45.0%
ATTGAGAATGGGAAAGCTCG+GGG + chr2_1:2201988-2202007 Msa0187450:CDS 45.0%
CACCCAGTTCATCTTGGAAA+CGG + chr2_1:2202052-2202071 Msa0187450:CDS 45.0%
ACCCAGTTCATCTTGGAAAC+GGG + chr2_1:2202053-2202072 Msa0187450:CDS 45.0%
ACCCGTTTCCAAGATGAACT+GGG - chr2_1:2202057-2202076 None:intergenic 45.0%
! AAGACGACTCTGAGGATTCA+GGG + chr2_1:2202094-2202113 Msa0187450:CDS 45.0%
TGAGGATTCAGGGTCTGATA+GGG + chr2_1:2202104-2202123 Msa0187450:CDS 45.0%
CATTGGAATGATGTCAGCCA+TGG - chr2_1:2202154-2202173 None:intergenic 45.0%
! GGGGCATCTACATCTAAAAG+TGG - chr2_1:2202192-2202211 None:intergenic 45.0%
ATGCAGCATCAGAACCATCA+CGG - chr2_1:2202233-2202252 None:intergenic 45.0%
TGAAGAGGAAGAAGCAATGG+AGG + chr2_1:2202359-2202378 Msa0187450:CDS 45.0%
GAAGAGGAAGAAGCAATGGA+GGG + chr2_1:2202360-2202379 Msa0187450:CDS 45.0%
ATCTGCTATCAAGTGGACAG+AGG + chr2_1:2202404-2202423 Msa0187450:CDS 45.0%
!! TGGGAACTTTGGAGCTTGAA+AGG + chr2_1:2202451-2202470 Msa0187450:CDS 45.0%
CGCAACATTAGAGGGAACAT+CGG - chr2_1:2202559-2202578 None:intergenic 45.0%
AGGCTGTAGAATAGATGGAG+CGG - chr2_1:2202661-2202680 None:intergenic 45.0%
CGTCTAGGCTGTAGAATAGA+TGG - chr2_1:2202666-2202685 None:intergenic 45.0%
GGTCGTACGGAATGTCAAAA+GGG - chr2_1:2202692-2202711 None:intergenic 45.0%
TAGCATGGGACCTTCAGTAT+TGG + chr2_1:2202809-2202828 Msa0187450:CDS 45.0%
AGCATGGGACCTTCAGTATT+GGG + chr2_1:2202810-2202829 Msa0187450:CDS 45.0%
TGGGGATATCTAAGCAAGAG+AGG + chr2_1:2202829-2202848 Msa0187450:CDS 45.0%
ATCTGAAAGGATGGTTTCGG+AGG + chr2_1:2202881-2202900 Msa0187450:CDS 45.0%
TCTGAAAGGATGGTTTCGGA+GGG + chr2_1:2202882-2202901 Msa0187450:CDS 45.0%
! AGGGAACAAGCTATTTCCAG+AGG + chr2_1:2202901-2202920 Msa0187450:CDS 45.0%
!! GAACTTGCTGACTCAGTATC+TGG - chr2_1:2202990-2203009 None:intergenic 45.0%
GATACTGAGTCAGCAAGTTC+AGG + chr2_1:2202990-2203009 Msa0187450:CDS 45.0%
TTTGGATGGCGTTTCTGTTG+AGG + chr2_1:2203076-2203095 Msa0187450:CDS 45.0%
TGTGGAGATGATAGAAGGTG+AGG + chr2_1:2203136-2203155 Msa0187450:CDS 45.0%
GAAGATGAAATAGTGCTCGG+TGG + chr2_1:2203179-2203198 Msa0187450:CDS 45.0%
! AGTGGAAGATCCTTCTGAGA+TGG + chr2_1:2203202-2203221 Msa0187450:CDS 45.0%
ATTTCAAGCTCTCCTGTTGC+AGG - chr2_1:2203236-2203255 None:intergenic 45.0%
CGACGAGCAATTCAATGATG+GGG + chr2_1:2203256-2203275 Msa0187450:CDS 45.0%
GTCAATCACTTCTGATCGGT+AGG - chr2_1:2203339-2203358 None:intergenic 45.0%
GATTGACGACATACCTGATG+AGG + chr2_1:2203352-2203371 Msa0187450:CDS 45.0%
GGGTTGAAGTTCTCGATTCT+GGG - chr2_1:2203421-2203440 None:intergenic 45.0%
! TGGGTTGAAGTTCTCGATTC+TGG - chr2_1:2203422-2203441 None:intergenic 45.0%
TTCAACCCAAACTTCAGTGG+AGG + chr2_1:2203433-2203452 Msa0187450:CDS 45.0%
TGATTCCTCGACTGAAGTTC+GGG - chr2_1:2203474-2203493 None:intergenic 45.0%
CTTCCAGCATATAAGTGGTG+AGG + chr2_1:2203496-2203515 Msa0187450:CDS 45.0%
GTCATAAACTGGTACCAGTG+GGG - chr2_1:2203531-2203550 None:intergenic 45.0%
CAGTCATAAACTGGTACCAG+TGG - chr2_1:2203533-2203552 None:intergenic 45.0%
!! GTAGTATCGACTGAGACAGT+AGG - chr2_1:2203638-2203657 None:intergenic 45.0%
AGTCGATACTACTGCTGATG+TGG + chr2_1:2203646-2203665 Msa0187450:CDS 45.0%
GTACAAGCCCAATGACAAAC+TGG + chr2_1:2203679-2203698 Msa0187450:CDS 45.0%
! TTTGACTTCCGCATGCAGTT+CGG - chr2_1:2203747-2203766 None:intergenic 45.0%
TCAAGACAATGTGGAGTCTC+CGG + chr2_1:2204000-2204019 Msa0187450:CDS 45.0%
GTTGGATAATGAGTCTGTGG+AGG + chr2_1:2204060-2204079 Msa0187450:CDS 45.0%
AGATGAAATGCCAGATTCCG+TGG + chr2_1:2204150-2204169 Msa0187450:CDS 45.0%
AAATCAGAAGCCACGGAATC+TGG - chr2_1:2204163-2204182 None:intergenic 45.0%
ACGCATATTTCCGATCGAAC+AGG + chr2_1:2204285-2204304 Msa0187450:CDS 45.0%
CACCATTATCCACCAAGATC+TGG + chr2_1:2204345-2204364 Msa0187450:CDS 45.0%
CTGACTTTCATCGTGATCAC+TGG - chr2_1:2204419-2204438 None:intergenic 45.0%
CAGTGATCACGATGAAAGTC+AGG + chr2_1:2204417-2204436 Msa0187450:CDS 45.0%
! CAACCAAGCCTTATCTCACT+AGG + chr2_1:2204933-2204952 Msa0187450:intron 45.0%
GCATACCACCTAGTGAGATA+AGG - chr2_1:2204944-2204963 None:intergenic 45.0%
!! TTGCAACTGTATTGGCTCCT+AGG + chr2_1:2204989-2205008 Msa0187450:intron 45.0%
!! TGCAACTGTATTGGCTCCTA+GGG + chr2_1:2204990-2205009 Msa0187450:intron 45.0%
TTAGCAGTCTCAGTAGGAGA+TGG - chr2_1:2205115-2205134 None:intergenic 45.0%
CATTCTGGTAGAACCTTCAC+AGG + chr2_1:2205554-2205573 Msa0187450:CDS 45.0%
TCCAAATCCACTTCACCAGT+GGG - chr2_1:2205699-2205718 None:intergenic 45.0%
TTCCAAATCCACTTCACCAG+TGG - chr2_1:2205700-2205719 None:intergenic 45.0%
GTCAGAATTGGACACAGTTG+GGG + chr2_1:2205869-2205888 Msa0187450:CDS 45.0%
!!! GATTTTAGTGTCGGTGATGC+TGG + chr2_1:2205891-2205910 Msa0187450:CDS 45.0%
TCAACTTAGTTCACTGCCTG+AGG + chr2_1:2205959-2205978 Msa0187450:CDS 45.0%
AAAAACAGCAGAGGTTGAGC+AGG + chr2_1:2205986-2206005 Msa0187450:CDS 45.0%
! ATCTGGCTTCAATGACTGGA+AGG - chr2_1:2206175-2206194 None:intergenic 45.0%
ACCCTTCAGTGTGAGCAATT+TGG + chr2_1:2206711-2206730 Msa0187450:three_prime_UTR 45.0%
TACACAAGAGGCAACACTGT+TGG - chr2_1:2206763-2206782 None:intergenic 45.0%
TCGGAAAAGGAACCCAGAAA+CGG - chr2_1:2206871-2206890 None:intergenic 45.0%
!!! ATAAAAATTAGATTTTTTTT+AGG - chr2_1:2201058-2201077 None:intergenic 5.0%
TCTGCACTGCTCTTCTGCTT+GGG + chr2_1:2201506-2201525 Msa0187450:CDS 50.0%
! CTTGGGACCCTTCTCAGTTT+TGG + chr2_1:2201523-2201542 Msa0187450:CDS 50.0%
TGGCTGCCCAAAACTGAGAA+GGG - chr2_1:2201533-2201552 None:intergenic 50.0%
TTGGCTGCCCAAAACTGAGA+AGG - chr2_1:2201534-2201553 None:intergenic 50.0%
! TGGCGTTGAAGAAGCGAGTT+TGG + chr2_1:2201705-2201724 Msa0187450:CDS 50.0%
CGTTGAAGAAGCGAGTTTGG+TGG + chr2_1:2201708-2201727 Msa0187450:CDS 50.0%
AGGGCAAGGAAGTTCATGAC+GGG + chr2_1:2201872-2201891 Msa0187450:CDS 50.0%
CACCCGTTTCCAAGATGAAC+TGG - chr2_1:2202058-2202077 None:intergenic 50.0%
CAGTTCATCTTGGAAACGGG+TGG + chr2_1:2202056-2202075 Msa0187450:CDS 50.0%
CACTGATGAAGACGACTCTG+AGG + chr2_1:2202086-2202105 Msa0187450:CDS 50.0%
! GAAGACGACTCTGAGGATTC+AGG + chr2_1:2202093-2202112 Msa0187450:CDS 50.0%
CTGAGGATTCAGGGTCTGAT+AGG + chr2_1:2202103-2202122 Msa0187450:CDS 50.0%
TTCTTCACCGGATGCTTCCA+TGG + chr2_1:2202134-2202153 Msa0187450:CDS 50.0%
!! ATGTCAGCCATGGAAGCATC+CGG - chr2_1:2202144-2202163 None:intergenic 50.0%
TGCAGCATCAGAACCATCAC+GGG - chr2_1:2202232-2202251 None:intergenic 50.0%
CATGGTGAAGCGGAAGAAGA+TGG + chr2_1:2202330-2202349 Msa0187450:CDS 50.0%
GCTTGAAAGGAACCGACGAT+TGG + chr2_1:2202464-2202483 Msa0187450:CDS 50.0%
ATGGGATTACCACCCATTCC+TGG + chr2_1:2202633-2202652 Msa0187450:CDS 50.0%
AGAATAGATGGAGCGGAACC+AGG - chr2_1:2202654-2202673 None:intergenic 50.0%
GGGTCGTACGGAATGTCAAA+AGG - chr2_1:2202693-2202712 None:intergenic 50.0%
GCATGGGACCTTCAGTATTG+GGG + chr2_1:2202811-2202830 Msa0187450:CDS 50.0%
GTCAGCAAGTTCAGGTGATC+AGG + chr2_1:2202998-2203017 Msa0187450:CDS 50.0%
GTTCAGGTGATCAGGATGAG+AGG + chr2_1:2203006-2203025 Msa0187450:CDS 50.0%
! GTTTCTGTTGAGGCTGGTCA+TGG + chr2_1:2203086-2203105 Msa0187450:CDS 50.0%
! TGAAATAGTGCTCGGTGGAG+TGG + chr2_1:2203184-2203203 Msa0187450:CDS 50.0%
CTGCTGCTCACATCAACACT+TGG - chr2_1:2203302-2203321 None:intergenic 50.0%
TCACTTCTGATCGGTAGGAC+TGG - chr2_1:2203334-2203353 None:intergenic 50.0%
TTCAACCCGAACTTCAGTCG+AGG + chr2_1:2203466-2203485 Msa0187450:CDS 50.0%
CCACCTCACCACTTATATGC+TGG - chr2_1:2203502-2203521 None:intergenic 50.0%
CCAGCATATAAGTGGTGAGG+TGG + chr2_1:2203499-2203518 Msa0187450:CDS 50.0%
!! GGTGGGCTACAGTCATAAAC+TGG - chr2_1:2203542-2203561 None:intergenic 50.0%
TAAGCTGTTCTGCTGAGGGT+GGG - chr2_1:2203559-2203578 None:intergenic 50.0%
ATAAGCTGTTCTGCTGAGGG+TGG - chr2_1:2203560-2203579 None:intergenic 50.0%
CAAGCCCAATGACAAACTGG+AGG + chr2_1:2203682-2203701 Msa0187450:CDS 50.0%
ACAGAAAACTCAGCCCTTGC+AGG - chr2_1:2203869-2203888 None:intergenic 50.0%
! TGCAAGGGCTGAGTTTTCTG+TGG + chr2_1:2203868-2203887 Msa0187450:CDS 50.0%
TTGTCAAGTTCCAGGGAGCA+AGG + chr2_1:2204319-2204338 Msa0187450:CDS 50.0%
!! AATGGTGTTACCTTGCTCCC+TGG - chr2_1:2204332-2204351 None:intergenic 50.0%
CCACCTAGTGAGATAAGGCT+TGG - chr2_1:2204939-2204958 None:intergenic 50.0%
! CCAAGCCTTATCTCACTAGG+TGG + chr2_1:2204936-2204955 Msa0187450:intron 50.0%
! CAAGGGTTAGCAGTCTCAGT+AGG - chr2_1:2205121-2205140 None:intergenic 50.0%
GTAGAACCTTCACAGGATGC+TGG + chr2_1:2205561-2205580 Msa0187450:CDS 50.0%
GATGCTGGCACTTCCAATGA+TGG + chr2_1:2205576-2205595 Msa0187450:CDS 50.0%
! GGCACTTCCAATGATGGAGT+TGG + chr2_1:2205582-2205601 Msa0187450:CDS 50.0%
AGTGGGTGAACGGAATTCAG+GGG - chr2_1:2205682-2205701 None:intergenic 50.0%
CAGTGGGTGAACGGAATTCA+GGG - chr2_1:2205683-2205702 None:intergenic 50.0%
! ACCCACTGGTGAAGTGGATT+TGG + chr2_1:2205695-2205714 Msa0187450:CDS 50.0%
! AGGGATCTGGCTTCAATGAC+TGG - chr2_1:2206179-2206198 None:intergenic 50.0%
TCTGCTCGTTTCTTCAGCAC+CGG - chr2_1:2206348-2206367 None:intergenic 50.0%
GAAACGAGCAGAACTCCAGT+TGG + chr2_1:2206356-2206375 Msa0187450:CDS 50.0%
AGAATCGCTAGAGCTCGAAC+TGG - chr2_1:2206456-2206475 None:intergenic 50.0%
!! TTCTAGCCTCGGAAGTACCA+TGG + chr2_1:2206576-2206595 Msa0187450:three_prime_UTR 50.0%
!! TCTAGCCTCGGAAGTACCAT+GGG + chr2_1:2206577-2206596 Msa0187450:three_prime_UTR 50.0%
TACCATGGGGTCTTGGCTAA+TGG + chr2_1:2206591-2206610 Msa0187450:three_prime_UTR 50.0%
TACCATTAGCCAAGACCCCA+TGG - chr2_1:2206596-2206615 None:intergenic 50.0%
GGTCTTGGCTAATGGTAGTC+AGG + chr2_1:2206599-2206618 Msa0187450:three_prime_UTR 50.0%
TGGCTAATGGTAGTCAGGTC+AGG + chr2_1:2206604-2206623 Msa0187450:three_prime_UTR 50.0%
GTCTGCACTGCTCTTCTGCT+TGG + chr2_1:2201505-2201524 Msa0187450:CDS 55.0%
GGATTCAGGGTCTGATAGGG+CGG + chr2_1:2202107-2202126 Msa0187450:CDS 55.0%
TAGGGCGGAGAGTTCTTCAC+CGG + chr2_1:2202122-2202141 Msa0187450:CDS 55.0%
GGGTGGAGCTCATCAAGCAT+TGG - chr2_1:2202171-2202190 None:intergenic 55.0%
GGACAAATGAGCAGGCTGTG+GGG - chr2_1:2202211-2202230 None:intergenic 55.0%
GGGACAAATGAGCAGGCTGT+GGG - chr2_1:2202212-2202231 None:intergenic 55.0%
CCATCACGGGACAAATGAGC+AGG - chr2_1:2202219-2202238 None:intergenic 55.0%
CCTGCTCATTTGTCCCGTGA+TGG + chr2_1:2202216-2202235 Msa0187450:CDS 55.0%
GAGGAAGAAGCAATGGAGGG+TGG + chr2_1:2202363-2202382 Msa0187450:CDS 55.0%
GATGGAGCGGAACCAGGAAT+GGG - chr2_1:2202648-2202667 None:intergenic 55.0%
AGATGGAGCGGAACCAGGAA+TGG - chr2_1:2202649-2202668 None:intergenic 55.0%
GATGGCGTTTCTGTTGAGGC+TGG + chr2_1:2203080-2203099 Msa0187450:CDS 55.0%
! GTTGAGGCTGGTCATGGAAG+TGG + chr2_1:2203092-2203111 Msa0187450:CDS 55.0%
AGCCTCTTCCGAACTGCATG+CGG + chr2_1:2203736-2203755 Msa0187450:CDS 55.0%
TTCCGCATGCAGTTCGGAAG+AGG - chr2_1:2203741-2203760 None:intergenic 55.0%
! GAAGTGCCAGCATCCTGTGA+AGG - chr2_1:2205570-2205589 None:intergenic 55.0%
CCAGTGGGTGAACGGAATTC+AGG - chr2_1:2205684-2205703 None:intergenic 55.0%
CCTGAATTCCGTTCACCCAC+TGG + chr2_1:2205681-2205700 Msa0187450:CDS 55.0%
CCACTTCACCAGTGGGTGAA+CGG - chr2_1:2205692-2205711 None:intergenic 55.0%
GACATGTAGCCCTCTGCTGA+AGG - chr2_1:2205786-2205805 None:intergenic 55.0%
!! CTAGCCTCGGAAGTACCATG+GGG + chr2_1:2206578-2206597 Msa0187450:three_prime_UTR 55.0%
AAGACCCCATGGTACTTCCG+AGG - chr2_1:2206585-2206604 None:intergenic 55.0%
!! TCGGAAGTACCATGGGGTCT+TGG + chr2_1:2206584-2206603 Msa0187450:three_prime_UTR 55.0%
GAGAATGGGAAAGCTCGGGG+AGG + chr2_1:2201991-2202010 Msa0187450:CDS 60.0%
AATGGGAAAGCTCGGGGAGG+CGG + chr2_1:2201994-2202013 Msa0187450:CDS 60.0%
CGGGACAAATGAGCAGGCTG+TGG - chr2_1:2202213-2202232 None:intergenic 60.0%
AGCAATGGAGGGTGGCCAAG+AGG + chr2_1:2202371-2202390 Msa0187450:CDS 60.0%
TGAGGTGGAAGAGACCCCAC+TGG + chr2_1:2203514-2203533 Msa0187450:CDS 60.0%
CCGTTCACCCACTGGTGAAG+TGG + chr2_1:2205689-2205708 Msa0187450:CDS 60.0%
ATGGGAAAGCTCGGGGAGGC+GGG + chr2_1:2201995-2202014 Msa0187450:CDS 65.0%
GGAGCGGAACCAGGAATGGG+TGG - chr2_1:2202645-2202664 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 2200713 2206920 2200713 ID=Msa0187450;Name=Msa0187450
chr2_1 mRNA 2200713 2206920 2200713 ID=Msa0187450-mRNA-1;Parent=Msa0187450;Name=Msa0187450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=338|1|1|1|0.33|0.5|4|439|1350
chr2_1 exon 2200713 2200958 2200713 ID=Msa0187450-mRNA-1:exon:990;Parent=Msa0187450-mRNA-1
chr2_1 exon 2201088 2201143 2201088 ID=Msa0187450-mRNA-1:exon:991;Parent=Msa0187450-mRNA-1
chr2_1 exon 2201289 2204438 2201289 ID=Msa0187450-mRNA-1:exon:992;Parent=Msa0187450-mRNA-1
chr2_1 exon 2205543 2206920 2205543 ID=Msa0187450-mRNA-1:exon:993;Parent=Msa0187450-mRNA-1
chr2_1 five_prime_UTR 2200713 2200958 2200713 ID=Msa0187450-mRNA-1:five_prime_utr;Parent=Msa0187450-mRNA-1
chr2_1 five_prime_UTR 2201088 2201143 2201088 ID=Msa0187450-mRNA-1:five_prime_utr;Parent=Msa0187450-mRNA-1
chr2_1 five_prime_UTR 2201289 2201324 2201289 ID=Msa0187450-mRNA-1:five_prime_utr;Parent=Msa0187450-mRNA-1
chr2_1 CDS 2201325 2204438 2201325 ID=Msa0187450-mRNA-1:cds;Parent=Msa0187450-mRNA-1
chr2_1 CDS 2205543 2206481 2205543 ID=Msa0187450-mRNA-1:cds;Parent=Msa0187450-mRNA-1
chr2_1 three_prime_UTR 2206482 2206920 2206482 ID=Msa0187450-mRNA-1:three_prime_utr;Parent=Msa0187450-mRNA-1
Gene Sequence

>Msa0187450

ATGGGATCAGTGATTGAAATTGGAATCAAAGTTAGGAAATTTGTTTTCATTTCAATCAGAGGGGTTTACAGATCAGCTTGCCATCATCCATTTCTTTTGGGTTTTTTAGGATTTTTGCTGTTTTTGTACAGATATTTTCCTTTTTTGTTTTCTGTTTTGGTTTCTGCGTCTCCTGTTTTAGTCTGCACTGCTCTTCTGCTTGGGACCCTTCTCAGTTTTGGGCAGCCAAATGTGCCTGAGTTTGAAAAGGAAGAGAGAGTTACTCATGGTATTTCGTCGTTTCAAACTGGATTTTCGGAGGGTGAAACCATTGTTTCTGATAGAGATGAGAGCTATTTTGTGAGAGGATATTCAGAACATAGAAGTGATATTGAAGAGAGTGGCGTTGAAGAAGCGAGTTTGGTGGGTGTTAAAGATGATAGGAGTGAGGATGATCATGGTTTGCTTTATGACTCTGCGCTGGATGATGTTAACTTGCAGGATATTCAGCATGAGAACGAAGTAAAAGGGGATGTAGAAAGGGAATTACATAGTTTTGACTTAGGAAAGGGCAAGGAAGTTCATGACGGGAACCTCACATCCGAAGTTGTTTCAAGTGACGACGAAGCTATTGAGAAACAGTATGTCATGGTTCAAAAAGAAGATGATGATGATATTTTTGAAATTGAGAATGGGAAAGCTCGGGGAGGCGGGTTTGATTCATTTAAGGAAGGTGATGCAGATTGTTCACCCAGTTCATCTTGGAAACGGGTGGAGAACAACACTGATGAAGACGACTCTGAGGATTCAGGGTCTGATAGGGCGGAGAGTTCTTCACCGGATGCTTCCATGGCTGACATCATTCCAATGCTTGATGAGCTCCACCCACTTTTAGATGTAGATGCCCCACAGCCTGCTCATTTGTCCCGTGATGGTTCTGATGCTGCATCCGAGAAATCTCAGAAAAGCGACAACGACGATGACGATGATGACAACAGTGTCGAATCAGATGAAGATATTGAAAATCATGGTGAAGCGGAAGAAGATGGTGTTGATGAAGAGGAAGAAGCAATGGAGGGTGGCCAAGAGGATGAAAGTAAATCTGCTATCAAGTGGACAGAGGATGACCAAAAGAATCTTATGGATCTGGGAACTTTGGAGCTTGAAAGGAACCGACGATTGGAAAGTCTTATAGCTAGGAGAATGGCAAGGAGATTGATGACTGAAAAGAATCTAATAGACTTAGATAGTGCCGATGTTCCCTCTAATGTTGCGCCTATTTCTGTTAGACGAAACCCTTTTGATTTCCCTGATGAATCTTATGCTGGCATGGGATTACCACCCATTCCTGGTTCCGCTCCATCTATTCTACAGCCTAGACGAAACCCTTTTGACATTCCGTACGACCCAAATGAAGAGAAACCTGATCTTAAAAGGGACAGTTTTCAACAAGAGTTCACACAGTTTAATCAAAAAGATGCATTTTTTCGGAGGCATGAAAGTTTTAGCATGGGACCTTCAGTATTGGGGATATCTAAGCAAGAGAGGCATGATATTAATTGGAAGCCTGTGTTTGTATCTGAAAGGATGGTTTCGGAGGGAACAAGCTATTTCCAGAGGCAATCTAGTGAAGTAAGTGATTCAAAGTTGAGCGAAGTAAGTGATTCAAAATTGAGTTCTGTTCCAGATACTGAGTCAGCAAGTTCAGGTGATCAGGATGAGAGGAAATTAAGTGAACGGGACTTGTCTCCAGAGACTGAATTAACATCTAATTTGGATGGCGTTTCTGTTGAGGCTGGTCATGGAAGTGGATCCTCTGAAGAAAATGAATCTGTGGAGATGATAGAAGGTGAGGAGAGCAATGTTTACCGTGATGAAGATGAAATAGTGCTCGGTGGAGTGGAAGATCCTTCTGAGATGGAATTTTATCCTGCAACAGGAGAGCTTGAAATCGACGAGCAATTCAATGATGGGGAAACAGATTTGACAAGAGAACCAAGTGTTGATGTGAGCAGCAGCAGATCAAGCCAGTCCTACCGATCAGAAGTGATTGACGACATACCTGATGAGGAATCAGAAAAAACTGCAAATTTGCAGCATGAAGATGGTCACTTCCCAGAATCGAGAACTTCAACCCAAACTTCAGTGGAGGAATCAATAATTTCAACCCGAACTTCAGTCGAGGAATCAAACTTCCAGCATATAAGTGGTGAGGTGGAAGAGACCCCACTGGTACCAGTTTATGACTGTAGCCCACCCTCAGCAGAACAGCTTATATCTTTTTCTTCCTTGTCTTCTGATTCAGCAACAGAGTTTTCTGAGACGGCATTGCCTACTGTCTCAGTCGATACTACTGCTGATGTGGCTGATAAAGAGTACAAGCCCAATGACAAACTGGAGGATAATTCTTCTAATCATGAGAAAATTCAAGCAGCCTCTTCCGAACTGCATGCGGAAGTCAAAAATGAAATGAGGTCCGAGGAATCTGAAGATATAGATCAGTACAATGTTACTGCAGAGGAGTTATCTGCAGTTATACCAAGTTTTGTTGATCAAAATAGACCTGCAAGGGCTGAGTTTTCTGTGGATTCCAACTTTTCTCTGGATATTGGATCAGAAAAGGGTGTAACTGATTCAGGTTTGTTTCATGAACAGGATATAGACAACCACATATCTGCTGATTCTGAAATGCTTCATCAAGACAATGTGGAGTCTCCGGATTCAAACTATCATCTGGCTTCTGATAAGTTACATATGTTGGATAATGAGTCTGTGGAGGAAGATGCACTGCCCAATGAAGTATCTAAACTAGATAATGAAAATATATCTGTTTCAGTACAAGATGAAGATGAAATGCCAGATTCCGTGGCTTCTGATTTTCATCACATACCTTCTAATAGTTCATCTATGCATGCATTAGGGGATTCACAGTTCTTACCAGTAGAAACAGAACATTTAGAGAAAAATTGGTCAAATGAAGAACGCATATTTCCGATCGAACAGGATAAAGTCTTGTTGTCAAGTTCCAGGGAGCAAGGTAACACCATTATCCACCAAGATCTGGATAAGAATCATCTGTCAAGCTCTGATAAATTGGTAGATGCACAATCTTCCAGTGATCACGATGAAAGTCAGAATTCTGATAACATTCTGGTAGAACCTTCACAGGATGCTGGCACTTCCAATGATGGAGTTGGAGAATTGCATGAACATGACTCCTTATATGAAACTCCCGTTATGATCTCTTCTGTGACTTCTGAAAATTCTGACACCCCTGAATTCCGTTCACCCACTGGTGAAGTGGATTTGGAAGTTTATAAGCATCATGGGGAACTTGCTAATGAAGACCAAAATGAAGCACAACAAAACTTAATTCCTTCAGCAGAGGGCTACATGTCTCCGAATAATGAAGAAAATTTCAATGAATTTGATTATATGAAGGATATTGACGAGGAATTCTTGTCAGAATTGGACACAGTTGGGGATTTTAGTGTCGGTGATGCTGGTGTATCGCATCGTACTGACGTTGTCCATGAAGAAACTAGAGATGCTCAACTTAGTTCACTGCCTGAGGATGTAAAAACAGCAGAGGTTGAGCAGGACAATGACATACCAGTTCTTGAAGTAAGATCACTTGAAGATATTGACATAGCTTTTAAGCAACTTCAAGAAGGAGTTGATGTTAATGATGTCATCCTTCCGAGTACAATTAAGGATCAGCTTGTTAGTGATGAATCTAGAGATCACGTGGAAGTTAATTCAGACCTTCCAGTCATTGAAGCCAGATCCCTAGAAGATATTGATGTTGCTTTAGAGAAAATATCTGAAGATAATCAAGGTGAGCTGCCAGAAAAAAGAGATGCAGAAGATGCTTCAGTCAAACTGGAAGCAAATGAAGATGGCTCAGCAAAGTTGAATGAATCATTTGATGTATCAACCGGTGCTGAAGAAACGAGCAGAACTCCAGTTGGTAAATTGGAAAATGTATCCATTAGCGGCTCTAGTAATAAGGAAAAATCTCACAGTAGGAAATCTAGTTCTAGTTCCAGTTCGAGCTCTAGCGATTCTGATTGA
Protein sequence

>Msa0187450

MGSVIEIGIKVRKFVFISIRGVYRSACHHPFLLGFLGFLLFLYRYFPFLFSVLVSASPVLVCTALLLGTLLSFGQPNVPEFEKEERVTHGISSFQTGFSEGETIVSDRDESYFVRGYSEHRSDIEESGVEEASLVGVKDDRSEDDHGLLYDSALDDVNLQDIQHENEVKGDVERELHSFDLGKGKEVHDGNLTSEVVSSDDEAIEKQYVMVQKEDDDDIFEIENGKARGGGFDSFKEGDADCSPSSSWKRVENNTDEDDSEDSGSDRAESSSPDASMADIIPMLDELHPLLDVDAPQPAHLSRDGSDAASEKSQKSDNDDDDDDNSVESDEDIENHGEAEEDGVDEEEEAMEGGQEDESKSAIKWTEDDQKNLMDLGTLELERNRRLESLIARRMARRLMTEKNLIDLDSADVPSNVAPISVRRNPFDFPDESYAGMGLPPIPGSAPSILQPRRNPFDIPYDPNEEKPDLKRDSFQQEFTQFNQKDAFFRRHESFSMGPSVLGISKQERHDINWKPVFVSERMVSEGTSYFQRQSSEVSDSKLSEVSDSKLSSVPDTESASSGDQDERKLSERDLSPETELTSNLDGVSVEAGHGSGSSEENESVEMIEGEESNVYRDEDEIVLGGVEDPSEMEFYPATGELEIDEQFNDGETDLTREPSVDVSSSRSSQSYRSEVIDDIPDEESEKTANLQHEDGHFPESRTSTQTSVEESIISTRTSVEESNFQHISGEVEETPLVPVYDCSPPSAEQLISFSSLSSDSATEFSETALPTVSVDTTADVADKEYKPNDKLEDNSSNHEKIQAASSELHAEVKNEMRSEESEDIDQYNVTAEELSAVIPSFVDQNRPARAEFSVDSNFSLDIGSEKGVTDSGLFHEQDIDNHISADSEMLHQDNVESPDSNYHLASDKLHMLDNESVEEDALPNEVSKLDNENISVSVQDEDEMPDSVASDFHHIPSNSSSMHALGDSQFLPVETEHLEKNWSNEERIFPIEQDKVLLSSSREQGNTIIHQDLDKNHLSSSDKLVDAQSSSDHDESQNSDNILVEPSQDAGTSNDGVGELHEHDSLYETPVMISSVTSENSDTPEFRSPTGEVDLEVYKHHGELANEDQNEAQQNLIPSAEGYMSPNNEENFNEFDYMKDIDEEFLSELDTVGDFSVGDAGVSHRTDVVHEETRDAQLSSLPEDVKTAEVEQDNDIPVLEVRSLEDIDIAFKQLQEGVDVNDVILPSTIKDQLVSDESRDHVEVNSDLPVIEARSLEDIDVALEKISEDNQGELPEKRDAEDASVKLEANEDGSAKLNESFDVSTGAEETSRTPVGKLENVSISGSSNKEKSHSRKSSSSSSSSSSDSD*