AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1428740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428740 MtrunA17_Chr7g0254611 93.377 1359 55 5 1 1328 1 1355 0.0 2385
Msa1428740 MtrunA17_Chr3g0104201 53.247 154 56 5 360 508 231 373 6.31e-35 139
Msa1428740 MtrunA17_Chr5g0429551 46.667 150 67 6 336 480 263 404 1.45e-27 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428740 AT5G17910.3 41.595 815 356 25 6 751 7 770 5.61e-128 429
Msa1428740 AT5G17910.1 41.595 815 356 25 6 751 7 770 5.61e-128 429
Msa1428740 AT5G17910.2 41.595 815 356 25 6 751 7 770 5.61e-128 429
Msa1428740 AT1G07330.1 51.572 159 62 5 360 515 156 302 2.56e-32 135
Msa1428740 AT1G07330.2 51.572 159 62 5 360 515 224 370 7.39e-32 135
Msa1428740 AT2G29620.4 55.396 139 51 5 360 494 222 353 3.14e-31 132
Msa1428740 AT2G29620.5 55.396 139 51 5 360 494 222 353 3.18e-31 132
Msa1428740 AT2G29620.1 55.396 139 51 5 360 494 222 353 3.18e-31 132
Msa1428740 AT2G29620.3 55.396 139 51 5 360 494 222 353 3.18e-31 132
Msa1428740 AT2G29620.6 55.396 139 51 5 360 494 222 353 3.18e-31 132
Msa1428740 AT2G29620.2 55.396 139 51 5 360 494 222 353 3.18e-31 132
Msa1428740 AT5G58880.1 45.752 153 63 6 363 495 186 338 6.08e-18 90.9

Find 326 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGGACCCTTCTCAGTTT+TGG 0.127452 tig0026409:+13806 Msa1428740:CDS
GAGCAATTTGGTATATATTT+AGG 0.144248 tig0026409:+18976 Msa1428740:three_prime_UTR
TCCCACATATCCTTGATTTC+TGG 0.170727 tig0026409:+13234 Msa1428740:five_prime_UTR
TTGCCATCATCCATTTCTTT+TGG 0.194807 tig0026409:+13685 Msa1428740:CDS
AAGAGAAACCTGATCTTAAA+AGG 0.196585 tig0026409:+15001 Msa1428740:CDS
TGGGTTGAAGTTCTCGATTC+TGG 0.198413 tig0026409:-15675 None:intergenic
GACTGAATTAACATCTAATT+TGG 0.205824 tig0026409:+15314 Msa1428740:CDS
ATACATCAAGTAGCCGTTTC+TGG 0.229119 tig0026409:+19108 Msa1428740:three_prime_UTR
AGATCAGGTTTCTCTTCATT+TGG 0.244304 tig0026409:-14994 None:intergenic
GAAAAGGGTGTAACTGATTC+AGG 0.249749 tig0026409:+16176 Msa1428740:CDS
AAGCAACATCAATATCTTCT+AGG 0.250336 tig0026409:-18449 None:intergenic
CAGCATGAGAACGAAGTAAA+AGG 0.253167 tig0026409:+14094 Msa1428740:CDS
CCAGTGGGTGAACGGAATTC+AGG 0.255586 tig0026409:-17934 None:intergenic
AGCAATTTGGTATATATTTA+GGG 0.265597 tig0026409:+18977 Msa1428740:three_prime_UTR
CAGAACTCCAGTTGGTAAAT+TGG 0.268938 tig0026409:+18617 Msa1428740:CDS
TTGTGTAGTCCAAAAGAAAT+TGG 0.276177 tig0026409:+19029 Msa1428740:three_prime_UTR
ACCCTTCAGTGTGAGCAATT+TGG 0.288890 tig0026409:+18964 Msa1428740:three_prime_UTR
TTGATTCCTCCACTGAAGTT+TGG 0.289051 tig0026409:-15695 None:intergenic
AGGCGGGTTTGATTCATTTA+AGG 0.291619 tig0026409:+14294 Msa1428740:CDS
CGAGGAATTCTTGTCAGAAT+TGG 0.293326 tig0026409:+18110 Msa1428740:CDS
ACCCACTGGTGAAGTGGATT+TGG 0.293409 tig0026409:+17948 Msa1428740:CDS
TCTTCTGCATCTCTTTCTTC+TGG 0.295934 tig0026409:-18507 None:intergenic
AGCATGGGACCTTCAGTATT+GGG 0.298527 tig0026409:+15090 Msa1428740:CDS
ATGGGATCAGTGATTGAAAT+TGG 0.304328 tig0026409:+13608 Msa1428740:CDS
GAAGACGACTCTGAGGATTC+AGG 0.307857 tig0026409:+14376 Msa1428740:CDS
AAGAGAGGCATGATATTAAT+TGG 0.312550 tig0026409:+15124 Msa1428740:CDS
CCAGATCCATAAGATTCTTT+TGG 0.313682 tig0026409:-14714 None:intergenic
GTCTGCACTGCTCTTCTGCT+TGG 0.313976 tig0026409:+13788 Msa1428740:CDS
GCAGAATTCTGATAACATTC+TGG 0.314438 tig0026409:+17792 Msa1428740:intron
AGAAATAGGCGCAACATTAG+AGG 0.317930 tig0026409:-14848 None:intergenic
ATTTCAAGCTCTCCTGTTGC+AGG 0.323313 tig0026409:-15489 None:intergenic
CCAAAAGAATCTTATGGATC+TGG 0.323917 tig0026409:+14714 Msa1428740:CDS
TGATTCCTCCACTGAAGTTT+GGG 0.324082 tig0026409:-15694 None:intergenic
GAATCAGAAGCCACGGAATC+TGG 0.324928 tig0026409:-16416 None:intergenic
GGGTTTCGTCTAACAGAAAT+AGG 0.325631 tig0026409:-14862 None:intergenic
CATTAGCGGCTCTAGTAATA+AGG 0.328342 tig0026409:+18650 Msa1428740:CDS
CATCCTTCCGAGTACAATTA+AGG 0.331057 tig0026409:+18353 Msa1428740:CDS
GTTCATCTATGCATGCATTA+GGG 0.334306 tig0026409:+16459 Msa1428740:CDS
TTCAGGTTTGTTTCATGAAC+AGG 0.334505 tig0026409:+16193 Msa1428740:CDS
ACAGAAAACTCAGCCCTTGC+AGG 0.334907 tig0026409:-16122 None:intergenic
AGTTCATCTATGCATGCATT+AGG 0.335962 tig0026409:+16458 Msa1428740:CDS
GAGCATCTCTAGTTTCTTCA+TGG 0.340461 tig0026409:-18191 None:intergenic
TTATAATTTGATTATAGAAA+TGG 0.347291 tig0026409:+19064 Msa1428740:three_prime_UTR
GATCAGGTTTCTCTTCATTT+GGG 0.352237 tig0026409:-14993 None:intergenic
TTGAAATTGGAATCAAAGTT+AGG 0.353627 tig0026409:+13621 Msa1428740:CDS
GAACTTGCTGACTCAGTATC+TGG 0.355850 tig0026409:-15243 None:intergenic
ATTATCCTCCAGTTTGTCAT+TGG 0.366057 tig0026409:-15943 None:intergenic
CACCCGTTTCCAAGATGAAC+TGG 0.366262 tig0026409:-14338 None:intergenic
CTTATTACTAGAGCCGCTAA+TGG 0.369063 tig0026409:-18649 None:intergenic
CAGATTTACTTTCATCCTCT+TGG 0.369414 tig0026409:-14669 None:intergenic
GGTATTTCGTCGTTTCAAAC+TGG 0.372815 tig0026409:+13875 Msa1428740:CDS
TCTGTCAAGCTCTGATAAAT+TGG 0.373937 tig0026409:+16634 Msa1428740:CDS
CTGAGGATTCAGGGTCTGAT+AGG 0.374468 tig0026409:+14386 Msa1428740:CDS
TGGCGTTGAAGAAGCGAGTT+TGG 0.380687 tig0026409:+13988 Msa1428740:CDS
ATCCAGATCTTGGTGGATAA+TGG 0.381159 tig0026409:-16603 None:intergenic
GGATGACCAAAAGAATCTTA+TGG 0.382692 tig0026409:+14708 Msa1428740:CDS
TCTGCACTGCTCTTCTGCTT+GGG 0.384208 tig0026409:+13789 Msa1428740:CDS
AAGTCTTGTTGTCAAGTTCC+AGG 0.385072 tig0026409:+16567 Msa1428740:CDS
TTGATTCCTCGACTGAAGTT+CGG 0.386253 tig0026409:-15728 None:intergenic
GCCAGATGATAGTTTGAATC+TGG 0.387118 tig0026409:-16275 None:intergenic
TGATTCCTCGACTGAAGTTC+GGG 0.388449 tig0026409:-15727 None:intergenic
TTAGATGTTAATTCAGTCTC+TGG 0.389336 tig0026409:-15309 None:intergenic
ATGGGATTACCACCCATTCC+TGG 0.392602 tig0026409:+14916 Msa1428740:CDS
ATCAATATCTTCTAGGGATC+TGG 0.392909 tig0026409:-18442 None:intergenic
AGAGCAGTGCAGACTAAAAC+AGG 0.394367 tig0026409:-13779 None:intergenic
GCTGGATGATGTTAACTTGC+AGG 0.394645 tig0026409:+14066 Msa1428740:CDS
CAATTCTCCAACTCCATCAT+TGG 0.397529 tig0026409:-17842 None:intergenic
TGGTGGGTGTTAAAGATGAT+AGG 0.397636 tig0026409:+14008 Msa1428740:CDS
TAAATAAGACAAAACTCTTT+CGG 0.399065 tig0026409:-18761 None:intergenic
TCTTATGGATCTGGGAACTT+TGG 0.400348 tig0026409:+14723 Msa1428740:CDS
TGTATCTGAAAGGATGGTTT+CGG 0.400759 tig0026409:+15158 Msa1428740:CDS
GATGATTCTTATCCAGATCT+TGG 0.402368 tig0026409:-16613 None:intergenic
TGTCAGAATTGGACACAGTT+GGG 0.405523 tig0026409:+18121 Msa1428740:CDS
GTTTCTTCAAGAATGAGTTT+TGG 0.407616 tig0026409:+18902 Msa1428740:three_prime_UTR
TTCTCTTCATTTGGGTCGTA+CGG 0.409972 tig0026409:-14985 None:intergenic
ATCTAGTTTAGATACTTCAT+TGG 0.411010 tig0026409:-16351 None:intergenic
GGGTTGAAGTTCTCGATTCT+GGG 0.412544 tig0026409:-15674 None:intergenic
AATGGGAAAGCTCGGGGAGG+CGG 0.413424 tig0026409:+14277 Msa1428740:CDS
TCTAAATGTTCTGTTTCTAC+TGG 0.415046 tig0026409:-16497 None:intergenic
GTCAGCAAGTTCAGGTGATC+AGG 0.417111 tig0026409:+15254 Msa1428740:CDS
CATAACGGGAGTTTCATATA+AGG 0.418793 tig0026409:-17878 None:intergenic
AGGGATCTGGCTTCAATGAC+TGG 0.419793 tig0026409:-18429 None:intergenic
TCCAATATCCAGAGAAAAGT+TGG 0.420593 tig0026409:-16150 None:intergenic
TACCATGGGGTCTTGGCTAA+TGG 0.421052 tig0026409:+18844 Msa1428740:three_prime_UTR
CGTCTAGGCTGTAGAATAGA+TGG 0.421928 tig0026409:-14946 None:intergenic
GATACTGAGTCAGCAAGTTC+AGG 0.427022 tig0026409:+15246 Msa1428740:CDS
TCTGGATATTGGATCAGAAA+AGG 0.427655 tig0026409:+16160 Msa1428740:CDS
CACCCAGTTCATCTTGGAAA+CGG 0.428157 tig0026409:+14335 Msa1428740:CDS
TGCATAGATGAACTATTAGA+AGG 0.429301 tig0026409:-16449 None:intergenic
ATTGTTCACCCAGTTCATCT+TGG 0.431253 tig0026409:+14329 Msa1428740:CDS
TTATCCTCCAGTTTGTCATT+GGG 0.432481 tig0026409:-15942 None:intergenic
CAATGAATTTGATTATATGA+AGG 0.434052 tig0026409:+18080 Msa1428740:CDS
CACCATTATCCACCAAGATC+TGG 0.434273 tig0026409:+16601 Msa1428740:CDS
ACCCAGTTCATCTTGGAAAC+GGG 0.435719 tig0026409:+14336 Msa1428740:CDS
AGCATGAGAACGAAGTAAAA+GGG 0.436593 tig0026409:+14095 Msa1428740:CDS
GATTCATCAGGGAAATCAAA+AGG 0.437699 tig0026409:-14883 None:intergenic
TGGCTAATGGTAGTCAGGTC+AGG 0.443018 tig0026409:+18857 Msa1428740:three_prime_UTR
GGGTCGTACGGAATGTCAAA+AGG 0.443320 tig0026409:-14973 None:intergenic
TACATCAAGTAGCCGTTTCT+GGG 0.444045 tig0026409:+19109 Msa1428740:three_prime_UTR
TTCTGATAAGTTACATATGT+TGG 0.446498 tig0026409:+16298 Msa1428740:CDS
TTGGAAGTTTATAAGCATCA+TGG 0.448475 tig0026409:+17967 Msa1428740:CDS
ATTGGATATGTGACCTTTGT+TGG 0.451235 tig0026409:-13124 None:intergenic
TCGGAAGTACCATGGGGTCT+TGG 0.451734 tig0026409:+18837 Msa1428740:three_prime_UTR
ATGCCAGCATAAGATTCATC+AGG 0.456470 tig0026409:-14895 None:intergenic
TTCTTCACCGGATGCTTCCA+TGG 0.459057 tig0026409:+14417 Msa1428740:CDS
TCTAGTTTAGATACTTCATT+GGG 0.459929 tig0026409:-16350 None:intergenic
GAATCATTTGATGTATCAAC+CGG 0.461951 tig0026409:+18579 Msa1428740:CDS
GCAAATTTGCAGCATGAAGA+TGG 0.462394 tig0026409:+15645 Msa1428740:CDS
AGTGATCTTACTTCAAGAAC+TGG 0.465393 tig0026409:-18273 None:intergenic
TAGCATGGGACCTTCAGTAT+TGG 0.467556 tig0026409:+15089 Msa1428740:CDS
ATGGGAAAGCTCGGGGAGGC+GGG 0.467780 tig0026409:+14278 Msa1428740:CDS
TTACTTCACTAGATTGCCTC+TGG 0.469192 tig0026409:-15197 None:intergenic
AGAAGATGCTTCAGTCAAAC+TGG 0.472046 tig0026409:+18524 Msa1428740:CDS
CTGACTTTCATCGTGATCAC+TGG 0.472410 tig0026409:-16672 None:intergenic
GTCACAGAAGAGATCATAAC+GGG 0.472705 tig0026409:-17892 None:intergenic
TGGGAACTTTGGAGCTTGAA+AGG 0.474478 tig0026409:+14734 Msa1428740:CDS
CAGTGGGTGAACGGAATTCA+GGG 0.474870 tig0026409:-17933 None:intergenic
AAAAGACTCACCAGAAATCA+AGG 0.475576 tig0026409:-13244 None:intergenic
TCCAGATTCAAACTATCATC+TGG 0.477250 tig0026409:+16274 Msa1428740:CDS
GTTGAGGCTGGTCATGGAAG+TGG 0.477400 tig0026409:+15348 Msa1428740:CDS
GGAAGAAAATAAGTCGGAAA+AGG 0.477832 tig0026409:-19134 None:intergenic
GATGAAGATATTGAAAATCA+TGG 0.478743 tig0026409:+14595 Msa1428740:CDS
TCTAGCCTCGGAAGTACCAT+GGG 0.481018 tig0026409:+18830 Msa1428740:three_prime_UTR
AGTTATCAAAGAGAAGGAGA+TGG 0.481171 tig0026409:+13589 Msa1428740:exon
CGGGACAAATGAGCAGGCTG+TGG 0.481413 tig0026409:-14493 None:intergenic
AAGTAAAAGGGGATGTAGAA+AGG 0.481574 tig0026409:+14107 Msa1428740:CDS
ACGCATATTTCCGATCGAAC+AGG 0.482665 tig0026409:+16541 Msa1428740:CDS
TTCCCTGATGAATCTTATGC+TGG 0.483195 tig0026409:+14892 Msa1428740:CDS
CACCAGAAATCAAGGATATG+TGG 0.484640 tig0026409:-13236 None:intergenic
TGGAAGTTTATAAGCATCAT+GGG 0.486241 tig0026409:+17968 Msa1428740:CDS
CTGCTGCTCACATCAACACT+TGG 0.487065 tig0026409:-15555 None:intergenic
TGAGAGGAAATTAAGTGAAC+GGG 0.487332 tig0026409:+15278 Msa1428740:CDS
AGATGGAGCGGAACCAGGAA+TGG 0.488504 tig0026409:-14929 None:intergenic
GGTGGGCTACAGTCATAAAC+TGG 0.488748 tig0026409:-15795 None:intergenic
GTACAAGCCCAATGACAAAC+TGG 0.488800 tig0026409:+15935 Msa1428740:CDS
CAGTGATCACGATGAAAGTC+AGG 0.489889 tig0026409:+16673 Msa1428740:CDS
GGTCTTGGCTAATGGTAGTC+AGG 0.491515 tig0026409:+18852 Msa1428740:three_prime_UTR
ATTCATCAGGGAAATCAAAA+GGG 0.491906 tig0026409:-14882 None:intergenic
AAGACGACTCTGAGGATTCA+GGG 0.492259 tig0026409:+14377 Msa1428740:CDS
CAAAAGAATCTTATGGATCT+GGG 0.494568 tig0026409:+14715 Msa1428740:CDS
TGAAGAGGAAGAAGCAATGG+AGG 0.496393 tig0026409:+14642 Msa1428740:CDS
AGAATCGCTAGAGCTCGAAC+TGG 0.496607 tig0026409:-18706 None:intergenic
TGATGAATCTTATGCTGGCA+TGG 0.497383 tig0026409:+14897 Msa1428740:CDS
ATCTATATCTTCAGATTCCT+CGG 0.502074 tig0026409:-16036 None:intergenic
ATCGACGAGCAATTCAATGA+TGG 0.502286 tig0026409:+15510 Msa1428740:CDS
CTGGATATTGGATCAGAAAA+GGG 0.503752 tig0026409:+16161 Msa1428740:CDS
GATGCTGGCACTTCCAATGA+TGG 0.504117 tig0026409:+17829 Msa1428740:CDS
TTCCGCATGCAGTTCGGAAG+AGG 0.504956 tig0026409:-15994 None:intergenic
TTGTCAGAATTGGACACAGT+TGG 0.510706 tig0026409:+18120 Msa1428740:CDS
TTCTAGCCTCGGAAGTACCA+TGG 0.510817 tig0026409:+18829 Msa1428740:three_prime_UTR
TCTGCTCGTTTCTTCAGCAC+CGG 0.510877 tig0026409:-18598 None:intergenic
TGTGGAGATGATAGAAGGTG+AGG 0.514980 tig0026409:+15392 Msa1428740:CDS
CCTGCTCATTTGTCCCGTGA+TGG 0.517042 tig0026409:+14499 Msa1428740:CDS
AGCAACATCAATATCTTCTA+GGG 0.518689 tig0026409:-18448 None:intergenic
GAATCTGTGGAGATGATAGA+AGG 0.519386 tig0026409:+15387 Msa1428740:CDS
AAATTGAGAATGGGAAAGCT+CGG 0.520186 tig0026409:+14269 Msa1428740:CDS
CCTGAATTCCGTTCACCCAC+TGG 0.522633 tig0026409:+17934 Msa1428740:CDS
TCGACGAGCAATTCAATGAT+GGG 0.523338 tig0026409:+15511 Msa1428740:CDS
AGAATAGATGGAGCGGAACC+AGG 0.523428 tig0026409:-14934 None:intergenic
GCTTGAAAGGAACCGACGAT+TGG 0.523486 tig0026409:+14747 Msa1428740:CDS
AAATGTGCCTGAGTTTGAAA+AGG 0.524184 tig0026409:+13835 Msa1428740:CDS
GATGGCGTTTCTGTTGAGGC+TGG 0.525036 tig0026409:+15336 Msa1428740:CDS
AATTGAGAATGGGAAAGCTC+GGG 0.526233 tig0026409:+14270 Msa1428740:CDS
AGAAGATGGTGTTGATGAAG+AGG 0.527905 tig0026409:+14627 Msa1428740:CDS
AATGGTGTTACCTTGCTCCC+TGG 0.528340 tig0026409:-16585 None:intergenic
GTTATCAAAGAGAAGGAGAT+GGG 0.528740 tig0026409:+13590 Msa1428740:exon
AACCCAAAAGAAATGGATGA+TGG 0.528957 tig0026409:-13688 None:intergenic
TTTGAGTTTCTTTCTAGCCT+CGG 0.529291 tig0026409:+18818 Msa1428740:three_prime_UTR
TTTCAGAATCAGCAGATATG+TGG 0.533463 tig0026409:-16226 None:intergenic
TTTGGATGGCGTTTCTGTTG+AGG 0.534740 tig0026409:+15332 Msa1428740:CDS
GGGACAAATGAGCAGGCTGT+GGG 0.535064 tig0026409:-14492 None:intergenic
CCACCTCACCACTTATATGC+TGG 0.535587 tig0026409:-15755 None:intergenic
TTTGACTTCCGCATGCAGTT+CGG 0.535820 tig0026409:-16000 None:intergenic
CCGTTCACCCACTGGTGAAG+TGG 0.537813 tig0026409:+17942 Msa1428740:CDS
TTGGAAAATGTATCCATTAG+CGG 0.538060 tig0026409:+18636 Msa1428740:CDS
ATGTCAGCCATGGAAGCATC+CGG 0.539039 tig0026409:-14424 None:intergenic
AGTAAAAGGGGATGTAGAAA+GGG 0.541286 tig0026409:+14108 Msa1428740:CDS
TGATGAAGAGGAAGAAGCAA+TGG 0.542971 tig0026409:+14639 Msa1428740:CDS
TACCAAATTGCTCACACTGA+AGG 0.543035 tig0026409:-18966 None:intergenic
TACACAAGAGGCAACACTGT+TGG 0.543270 tig0026409:-19013 None:intergenic
AAAGTAAATCTGCTATCAAG+TGG 0.543875 tig0026409:+14680 Msa1428740:CDS
AGCTGATCCTTAATTGTACT+CGG 0.544183 tig0026409:-18360 None:intergenic
AACTTAGTTCCTTCAGCAGA+GGG 0.545514 tig0026409:+18027 Msa1428740:CDS
GTCAGAATTGGACACAGTTG+GGG 0.546519 tig0026409:+18122 Msa1428740:CDS
TGAAATAGTGCTCGGTGGAG+TGG 0.547719 tig0026409:+15440 Msa1428740:CDS
CATTCTGGTAGAACCTTCAC+AGG 0.548522 tig0026409:+17807 Msa1428740:CDS
AGAGAAACCTGATCTTAAAA+GGG 0.548661 tig0026409:+15002 Msa1428740:CDS
GATGGAGCGGAACCAGGAAT+GGG 0.549049 tig0026409:-14928 None:intergenic
CTATAAGACTTTCCAATCGT+CGG 0.549342 tig0026409:-14759 None:intergenic
GTAGAACCTTCACAGGATGC+TGG 0.549406 tig0026409:+17814 Msa1428740:CDS
CTCTGAAGAAAATGAATCTG+TGG 0.550869 tig0026409:+15374 Msa1428740:CDS
GAATTAACATCTAATTTGGA+TGG 0.554143 tig0026409:+15318 Msa1428740:CDS
TCAAACTTCCAGCATATAAG+TGG 0.554512 tig0026409:+15747 Msa1428740:CDS
AAGACTTTATCCTGTTCGAT+CGG 0.556191 tig0026409:-16551 None:intergenic
GGTCGTACGGAATGTCAAAA+GGG 0.557243 tig0026409:-14972 None:intergenic
ACCAAATTGCTCACACTGAA+GGG 0.557629 tig0026409:-18965 None:intergenic
TTTGCTTTATGACTCTGCGC+TGG 0.557798 tig0026409:+14048 Msa1428740:CDS
GGGAAGAGTTATCAAAGAGA+AGG 0.557918 tig0026409:+13583 Msa1428740:five_prime_UTR
CCACTTCACCAGTGGGTGAA+CGG 0.558745 tig0026409:-17942 None:intergenic
CATGGTGAAGCGGAAGAAGA+TGG 0.559187 tig0026409:+14613 Msa1428740:CDS
TCACTTCTGATCGGTAGGAC+TGG 0.561391 tig0026409:-15587 None:intergenic
AGATATAAGCTGTTCTGCTG+AGG 0.561512 tig0026409:-15817 None:intergenic
ATCTGGCTTCAATGACTGGA+AGG 0.562067 tig0026409:-18425 None:intergenic
GGCACTTCCAATGATGGAGT+TGG 0.562093 tig0026409:+17835 Msa1428740:CDS
AAGTCTTATAGCTAGGAGAA+TGG 0.562545 tig0026409:+14771 Msa1428740:CDS
AAAATATCTGAAGATAATCA+AGG 0.563038 tig0026409:+18477 Msa1428740:CDS
GACATGTAGCCCTCTGCTGA+AGG 0.566330 tig0026409:-18036 None:intergenic
GATTGGAAAGTCTTATAGCT+AGG 0.566470 tig0026409:+14764 Msa1428740:CDS
TTGTCAAGTTCCAGGGAGCA+AGG 0.566942 tig0026409:+16575 Msa1428740:CDS
GATGAATCTTATGCTGGCAT+GGG 0.566948 tig0026409:+14898 Msa1428740:CDS
GATTCTTATCCAGATCTTGG+TGG 0.568851 tig0026409:-16610 None:intergenic
GATAGGAGTGAGGATGATCA+TGG 0.570111 tig0026409:+14025 Msa1428740:CDS
CGTTGAAGAAGCGAGTTTGG+TGG 0.571323 tig0026409:+13991 Msa1428740:CDS
GTTTCTGTTGAGGCTGGTCA+TGG 0.571762 tig0026409:+15342 Msa1428740:CDS
TGCAGCATCAGAACCATCAC+GGG 0.572842 tig0026409:-14512 None:intergenic
TTGGCTGCCCAAAACTGAGA+AGG 0.572888 tig0026409:-13814 None:intergenic
AGTGGAAGATCCTTCTGAGA+TGG 0.573204 tig0026409:+15458 Msa1428740:CDS
ACCAGAAATCAAGGATATGT+GGG 0.574125 tig0026409:-13235 None:intergenic
TGAGGATTCAGGGTCTGATA+GGG 0.574773 tig0026409:+14387 Msa1428740:CDS
GCATGGGACCTTCAGTATTG+GGG 0.575345 tig0026409:+15091 Msa1428740:CDS
TCGGAAAAGGAACCCAGAAA+CGG 0.578020 tig0026409:-19121 None:intergenic
AGCCTCTTCCGAACTGCATG+CGG 0.578260 tig0026409:+15992 Msa1428740:CDS
GATCCTTAATTGTACTCGGA+AGG 0.578783 tig0026409:-18356 None:intergenic
TTCATCTATGCATGCATTAG+GGG 0.579205 tig0026409:+16460 Msa1428740:CDS
CCATCACGGGACAAATGAGC+AGG 0.579312 tig0026409:-14499 None:intergenic
TGTGTTTGTATCTGAAAGGA+TGG 0.579824 tig0026409:+15152 Msa1428740:CDS
AACTTCAACCCAAACTTCAG+TGG 0.580356 tig0026409:+15686 Msa1428740:CDS
GTCGTCACTTGAAACAACTT+CGG 0.580846 tig0026409:-14188 None:intergenic
AGTCTTGTTGTCAAGTTCCA+GGG 0.580870 tig0026409:+16568 Msa1428740:CDS
ATCTGAAAGGATGGTTTCGG+AGG 0.582768 tig0026409:+15161 Msa1428740:CDS
AAACTGGAAGCAAATGAAGA+TGG 0.582852 tig0026409:+18540 Msa1428740:CDS
GGGGCATCTACATCTAAAAG+TGG 0.584034 tig0026409:-14472 None:intergenic
ATGAGAGGAAATTAAGTGAA+CGG 0.584291 tig0026409:+15277 Msa1428740:CDS
ATGTCAAAAGGGTTTCGTCT+AGG 0.585205 tig0026409:-14961 None:intergenic
GAAATAGGCGCAACATTAGA+GGG 0.585354 tig0026409:-14847 None:intergenic
GGATAAAATTCCATCTCAGA+AGG 0.586560 tig0026409:-15468 None:intergenic
AAAACTGTTCTTATGCAAAG+AGG 0.590201 tig0026409:-19155 None:intergenic
GGGTTTGATTCATTTAAGGA+AGG 0.590242 tig0026409:+14298 Msa1428740:CDS
GAAGAGGAAGAAGCAATGGA+GGG 0.590317 tig0026409:+14643 Msa1428740:CDS
CATTGGAATGATGTCAGCCA+TGG 0.593113 tig0026409:-14434 None:intergenic
ATAAGCTGTTCTGCTGAGGG+TGG 0.593673 tig0026409:-15813 None:intergenic
GAATGTATGTGTTATGACAT+TGG 0.593928 tig0026409:-13142 None:intergenic
GATATAAGCTGTTCTGCTGA+GGG 0.595064 tig0026409:-15816 None:intergenic
TGGCTGCCCAAAACTGAGAA+GGG 0.598305 tig0026409:-13813 None:intergenic
AGTCACAGAAGAGATCATAA+CGG 0.600400 tig0026409:-17893 None:intergenic
CAGTCATAAACTGGTACCAG+TGG 0.600828 tig0026409:-15786 None:intergenic
TTCCAAATCCACTTCACCAG+TGG 0.601007 tig0026409:-17950 None:intergenic
GGGTGGAGCTCATCAAGCAT+TGG 0.602110 tig0026409:-14451 None:intergenic
CTCATCTCTATCAGAAACAA+TGG 0.603541 tig0026409:-13915 None:intergenic
AGGGCAAGGAAGTTCATGAC+GGG 0.603681 tig0026409:+14155 Msa1428740:CDS
GTCAATCACTTCTGATCGGT+AGG 0.604561 tig0026409:-15592 None:intergenic
TGATCAAAATAGACCTGCAA+GGG 0.604933 tig0026409:+16109 Msa1428740:CDS
TCGCTCAAAATGACTTCTCT+CGG 0.605152 tig0026409:-18737 None:intergenic
TTGAAACAACTTCGGATGTG+AGG 0.605383 tig0026409:-14180 None:intergenic
ACCCGTTTCCAAGATGAACT+GGG 0.605587 tig0026409:-14337 None:intergenic
TCCAAATCCACTTCACCAGT+GGG 0.608186 tig0026409:-17949 None:intergenic
TTGATCAAAATAGACCTGCA+AGG 0.609906 tig0026409:+16108 Msa1428740:CDS
TATTGAAAATCATGGTGAAG+CGG 0.609946 tig0026409:+14603 Msa1428740:CDS
AGTCGATACTACTGCTGATG+TGG 0.610438 tig0026409:+15902 Msa1428740:CDS
GTAGTATCGACTGAGACAGT+AGG 0.610894 tig0026409:-15891 None:intergenic
TACCATTAGCCAAGACCCCA+TGG 0.612002 tig0026409:-18846 None:intergenic
AGATGAAATGCCAGATTCCG+TGG 0.613020 tig0026409:+16406 Msa1428740:CDS
TAAGCTGTTCTGCTGAGGGT+GGG 0.613443 tig0026409:-15812 None:intergenic
AAACTTAGTTCCTTCAGCAG+AGG 0.613845 tig0026409:+18026 Msa1428740:CDS
CCAGCATATAAGTGGTGAGG+TGG 0.614631 tig0026409:+15755 Msa1428740:CDS
GAGGAAGAAGCAATGGAGGG+TGG 0.617795 tig0026409:+14646 Msa1428740:CDS
CAAAGAGGAAGAAAATAAGT+CGG 0.617796 tig0026409:-19140 None:intergenic
AGAAGTGATATTGAAGAGAG+TGG 0.618500 tig0026409:+13968 Msa1428740:CDS
GTTGAAGAAGCGAGTTTGGT+GGG 0.618570 tig0026409:+13992 Msa1428740:CDS
CAGTTCATCTTGGAAACGGG+TGG 0.621234 tig0026409:+14339 Msa1428740:CDS
TTAGATATCCCCAATACTGA+AGG 0.622720 tig0026409:-15099 None:intergenic
GTGATGAGAATCAGAAGCCA+CGG 0.622990 tig0026409:-16423 None:intergenic
TTCAACCCGAACTTCAGTCG+AGG 0.624715 tig0026409:+15722 Msa1428740:CDS
ATGCAGCATCAGAACCATCA+CGG 0.624845 tig0026409:-14513 None:intergenic
GAAGTGCCAGCATCCTGTGA+AGG 0.626948 tig0026409:-17820 None:intergenic
CGCAACATTAGAGGGAACAT+CGG 0.628270 tig0026409:-14839 None:intergenic
TCAACTTAGTTCACTGCCTG+AGG 0.630538 tig0026409:+18212 Msa1428740:CDS
GGAGCGGAACCAGGAATGGG+TGG 0.630834 tig0026409:-14925 None:intergenic
TTCAACCCAAACTTCAGTGG+AGG 0.630846 tig0026409:+15689 Msa1428740:CDS
CGACGAGCAATTCAATGATG+GGG 0.631025 tig0026409:+15512 Msa1428740:CDS
TATTGAGAAACAGTATGTCA+TGG 0.631572 tig0026409:+14216 Msa1428740:CDS
AGTCATAAACTGGTACCAGT+GGG 0.632600 tig0026409:-15785 None:intergenic
TCAGTACAATGTTACTGCAG+AGG 0.633692 tig0026409:+16058 Msa1428740:CDS
GAAACGAGCAGAACTCCAGT+TGG 0.634788 tig0026409:+18609 Msa1428740:CDS
GTTCAGGTGATCAGGATGAG+AGG 0.634982 tig0026409:+15262 Msa1428740:CDS
GCATGAGAACGAAGTAAAAG+GGG 0.635965 tig0026409:+14096 Msa1428740:CDS
TAGGGCGGAGAGTTCTTCAC+CGG 0.636324 tig0026409:+14405 Msa1428740:CDS
GGGCATCTACATCTAAAAGT+GGG 0.637297 tig0026409:-14471 None:intergenic
GATTGACGACATACCTGATG+AGG 0.638457 tig0026409:+15608 Msa1428740:CDS
TGTTGCTGAATCAGAAGACA+AGG 0.639181 tig0026409:-15847 None:intergenic
AGCAATGGAGGGTGGCCAAG+AGG 0.641559 tig0026409:+14654 Msa1428740:CDS
CATCTACATCTAAAAGTGGG+TGG 0.644161 tig0026409:-14468 None:intergenic
GCACTATTTCATCTTCATCA+CGG 0.645125 tig0026409:-15428 None:intergenic
TGTCGTCAATCACTTCTGAT+CGG 0.645572 tig0026409:-15596 None:intergenic
TCTGAAAGGATGGTTTCGGA+GGG 0.646637 tig0026409:+15162 Msa1428740:CDS
ATCCTTTCAGATACAAACAC+AGG 0.649789 tig0026409:-15150 None:intergenic
TGTTAAAGATGATAGGAGTG+AGG 0.651600 tig0026409:+14015 Msa1428740:CDS
TGCCAGCATAAGATTCATCA+GGG 0.652519 tig0026409:-14894 None:intergenic
AAGGAAGAGAGAGTTACTCA+TGG 0.654060 tig0026409:+13854 Msa1428740:CDS
GGAAGTTTATAAGCATCATG+GGG 0.655001 tig0026409:+17969 Msa1428740:CDS
CACTGATGAAGACGACTCTG+AGG 0.655307 tig0026409:+14369 Msa1428740:CDS
AGCCTGTGTTTGTATCTGAA+AGG 0.656712 tig0026409:+15148 Msa1428740:CDS
CTTCCAGCATATAAGTGGTG+AGG 0.659771 tig0026409:+15752 Msa1428740:CDS
TGATGAATCTAGAGATCACG+TGG 0.660170 tig0026409:+18389 Msa1428740:CDS
TATGTTGGATAATGAGTCTG+TGG 0.662664 tig0026409:+16313 Msa1428740:CDS
AAGGGCAAGGAAGTTCATGA+CGG 0.664816 tig0026409:+14154 Msa1428740:CDS
GGATTCAGGGTCTGATAGGG+CGG 0.669574 tig0026409:+14390 Msa1428740:CDS
ATCTGCTATCAAGTGGACAG+AGG 0.673753 tig0026409:+14687 Msa1428740:CDS
AGGCTGTAGAATAGATGGAG+CGG 0.674409 tig0026409:-14941 None:intergenic
TGGGGATATCTAAGCAAGAG+AGG 0.674635 tig0026409:+15109 Msa1428740:CDS
GAGAATGGGAAAGCTCGGGG+AGG 0.676413 tig0026409:+14274 Msa1428740:CDS
AAGACCCCATGGTACTTCCG+AGG 0.676543 tig0026409:-18835 None:intergenic
ATTGAGAATGGGAAAGCTCG+GGG 0.677593 tig0026409:+14271 Msa1428740:CDS
AATGCTTCATCAAGACAATG+TGG 0.677719 tig0026409:+16247 Msa1428740:CDS
GGACAAATGAGCAGGCTGTG+GGG 0.684535 tig0026409:-14491 None:intergenic
TTATAGCTAGGAGAATGGCA+AGG 0.684879 tig0026409:+14776 Msa1428740:CDS
TGAGGTGGAAGAGACCCCAC+TGG 0.690480 tig0026409:+15770 Msa1428740:CDS
AGGGAACAAGCTATTTCCAG+AGG 0.691282 tig0026409:+15181 Msa1428740:CDS
TTATATGAAGGATATTGACG+AGG 0.699799 tig0026409:+18092 Msa1428740:CDS
GTTGGATAATGAGTCTGTGG+AGG 0.700744 tig0026409:+16316 Msa1428740:CDS
GATGAAGATGAAATAGTGCT+CGG 0.703578 tig0026409:+15432 Msa1428740:CDS
AGTGGGTGAACGGAATTCAG+GGG 0.711324 tig0026409:-17932 None:intergenic
GTCATAAACTGGTACCAGTG+GGG 0.715616 tig0026409:-15784 None:intergenic
CAAGCCCAATGACAAACTGG+AGG 0.720413 tig0026409:+15938 Msa1428740:CDS
CTAGCCTCGGAAGTACCATG+GGG 0.726729 tig0026409:+18831 Msa1428740:three_prime_UTR
GAAGATGAAATAGTGCTCGG+TGG 0.744614 tig0026409:+15435 Msa1428740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTATGTATATTTTTTTTTT+TGG - tig0026409:13199-13218 None:intergenic 10.0%
!! CTAATATATTTAAATCTATA+TGG + tig0026409:17134-17153 Msa1428740:intron 10.0%
!! TTATAATTTGATTATAGAAA+TGG + tig0026409:19064-19083 Msa1428740:three_prime_UTR 10.0%
!! ATAATCAATTATGGAATAAA+GGG - tig0026409:13296-13315 None:intergenic 15.0%
!!! TCTAATTTTTATTTGATTTC+AGG + tig0026409:13349-13368 Msa1428740:intron 15.0%
!!! CTAATTTTTATTTGATTTCA+GGG + tig0026409:13350-13369 Msa1428740:intron 15.0%
!!! ATATTTTTGAAATTGAGAAT+GGG + tig0026409:14260-14279 Msa1428740:CDS 15.0%
!! CAAGAAAAGAAAAAAAATTA+TGG + tig0026409:16916-16935 Msa1428740:intron 15.0%
!! AAACATTAATCTCTATTTAT+AGG + tig0026409:16979-16998 Msa1428740:intron 15.0%
!!! TTGAAATTTTCTTCATTATT+CGG - tig0026409:18063-18082 None:intergenic 15.0%
!! TATACATAGAAAAAAAACAG+AGG + tig0026409:13209-13228 Msa1428740:five_prime_UTR 20.0%
!! CATAATCAATTATGGAATAA+AGG - tig0026409:13297-13316 None:intergenic 20.0%
!!! TTAGCTTTTATTTCCTTTTA+TGG + tig0026409:13473-13492 Msa1428740:intron 20.0%
!!! GATATTTTTGAAATTGAGAA+TGG + tig0026409:14259-14278 Msa1428740:CDS 20.0%
!!! TTCAAAAAGATGCATTTTTT+CGG + tig0026409:15052-15071 Msa1428740:CDS 20.0%
!!! ATGATAATGATTGAGTAATA+TGG + tig0026409:17051-17070 Msa1428740:intron 20.0%
!! ATTTAAATCTATATGGAATC+TGG + tig0026409:17141-17160 Msa1428740:intron 20.0%
!! AATGAAAGAACAAATTATTC+CGG - tig0026409:17654-17673 None:intergenic 20.0%
!!! AATTTATGATCAGTTCTTTT+TGG - tig0026409:17760-17779 None:intergenic 20.0%
!! CAATGAATTTGATTATATGA+AGG + tig0026409:18080-18099 Msa1428740:CDS 20.0%
!! AAAATATCTGAAGATAATCA+AGG + tig0026409:18477-18496 Msa1428740:CDS 20.0%
!! TAAATAAGACAAAACTCTTT+CGG - tig0026409:18764-18783 None:intergenic 20.0%
!!! TTGTTTTGAGTTTTTTTCTT+CGG + tig0026409:18786-18805 Msa1428740:three_prime_UTR 20.0%
!!! TTTCTATAATTTTGATGGAT+TGG + tig0026409:18880-18899 Msa1428740:three_prime_UTR 20.0%
!! AGCAATTTGGTATATATTTA+GGG + tig0026409:18977-18996 Msa1428740:three_prime_UTR 20.0%
!!! ACAAAAAATCCAATTTCTTT+TGG - tig0026409:19041-19060 None:intergenic 20.0%
! GATCATAGCATAATCAATTA+TGG - tig0026409:13305-13324 None:intergenic 25.0%
!!! TTTTATTTGATTTCAGGGAT+TGG + tig0026409:13355-13374 Msa1428740:intron 25.0%
!!! TGTCATTCATTTTGATTCAT+TGG + tig0026409:13397-13416 Msa1428740:five_prime_UTR 25.0%
! ATCATCAATAGTTCCATAAA+AGG - tig0026409:13489-13508 None:intergenic 25.0%
!! TTTTATGGAACTATTGATGA+TGG + tig0026409:13488-13507 Msa1428740:intron 25.0%
! ATCAACCATAAACAAACAAA+AGG - tig0026409:13538-13557 None:intergenic 25.0%
!!! AAAAAACAGGTTTTAGCTAA+GGG + tig0026409:13563-13582 Msa1428740:intron 25.0%
! TTGAAATTGGAATCAAAGTT+AGG + tig0026409:13621-13640 Msa1428740:CDS 25.0%
!!! TTTGTTTTCATTTCAATCAG+AGG + tig0026409:13647-13666 Msa1428740:CDS 25.0%
!! TTGTTTTCATTTCAATCAGA+GGG + tig0026409:13648-13667 Msa1428740:CDS 25.0%
!!! TCCTTTTTTGTTTTCTGTTT+TGG + tig0026409:13745-13764 Msa1428740:CDS 25.0%
! ACCAAAACAGAAAACAAAAA+AGG - tig0026409:13749-13768 None:intergenic 25.0%
!!! GAATTACATAGTTTTGACTT+AGG + tig0026409:14130-14149 Msa1428740:CDS 25.0%
! GATGAAGATATTGAAAATCA+TGG + tig0026409:14595-14614 Msa1428740:CDS 25.0%
! GACTGAATTAACATCTAATT+TGG + tig0026409:15314-15333 Msa1428740:CDS 25.0%
! GAATTAACATCTAATTTGGA+TGG + tig0026409:15318-15337 Msa1428740:CDS 25.0%
!!! CTATTTTGATCAACAAAACT+TGG - tig0026409:16101-16120 None:intergenic 25.0%
! TTCTGATAAGTTACATATGT+TGG + tig0026409:16298-16317 Msa1428740:CDS 25.0%
!! TCTAGTTTAGATACTTCATT+GGG - tig0026409:16353-16372 None:intergenic 25.0%
!! ATCTAGTTTAGATACTTCAT+TGG - tig0026409:16354-16373 None:intergenic 25.0%
! CAGAACATTTAGAGAAAAAT+TGG + tig0026409:16507-16526 Msa1428740:CDS 25.0%
!! TTTAAGGTTCCATATGATTA+AGG + tig0026409:16731-16750 Msa1428740:intron 25.0%
!! TGTGATTTTCCTTAATCATA+TGG - tig0026409:16743-16762 None:intergenic 25.0%
! TCAACAAGAATATTATCAGT+AGG - tig0026409:16865-16884 None:intergenic 25.0%
!! GAGATTAATGTTTACTCTTT+TGG - tig0026409:16972-16991 None:intergenic 25.0%
! AGATACATAAGATTAGAAAC+TGG + tig0026409:17097-17116 Msa1428740:intron 25.0%
! CAATACAGTTGCAATATTAA+TGG - tig0026409:17237-17256 None:intergenic 25.0%
! CATTAATATTGCAACTGTAT+TGG + tig0026409:17235-17254 Msa1428740:intron 25.0%
! CTTGAAAAATGTTCATTCAT+TGG - tig0026409:17288-17307 None:intergenic 25.0%
! AAAGATCAAGAAAAGACAAA+GGG - tig0026409:17315-17334 None:intergenic 25.0%
! AAAAGATCAAGAAAAGACAA+AGG - tig0026409:17316-17335 None:intergenic 25.0%
! AGATAGGTTGTTCTTTAATT+TGG + tig0026409:17430-17449 Msa1428740:intron 25.0%
! TATTTGCTTGATTCATCTTT+CGG - tig0026409:17496-17515 None:intergenic 25.0%
!! TCAGGTTTCTATAATTTTGA+TGG + tig0026409:18875-18894 Msa1428740:three_prime_UTR 25.0%
! GAGCAATTTGGTATATATTT+AGG + tig0026409:18976-18995 Msa1428740:three_prime_UTR 25.0%
! TTTGAAAAAAGAGAGAGTGT+GGG - tig0026409:13104-13123 None:intergenic 30.0%
!!! CTCTTTTTTCAAACCAACAA+AGG + tig0026409:13111-13130 Msa1428740:five_prime_UTR 30.0%
GAATGTATGTGTTATGACAT+TGG - tig0026409:13145-13164 None:intergenic 30.0%
TAAAGGGTCATCAAATATGA+AGG - tig0026409:13280-13299 None:intergenic 30.0%
!!! ATTTTGATTCATTGGTGTTG+AGG + tig0026409:13405-13424 Msa1428740:five_prime_UTR 30.0%
!! GGTATCCTTTTGTTTGTTTA+TGG + tig0026409:13530-13549 Msa1428740:intron 30.0%
!! TGGTTGATGAATCAAAAAAC+AGG + tig0026409:13550-13569 Msa1428740:intron 30.0%
!!! CAAAAAACAGGTTTTAGCTA+AGG + tig0026409:13562-13581 Msa1428740:intron 30.0%
! TGTTTTCATTTCAATCAGAG+GGG + tig0026409:13649-13668 Msa1428740:CDS 30.0%
CCTAAAAAACCCAAAAGAAA+TGG - tig0026409:13698-13717 None:intergenic 30.0%
!!! CCATTTCTTTTGGGTTTTTT+AGG + tig0026409:13695-13714 Msa1428740:CDS 30.0%
!!! ACATAGTTTTGACTTAGGAA+AGG + tig0026409:14135-14154 Msa1428740:CDS 30.0%
!!! CATAGTTTTGACTTAGGAAA+GGG + tig0026409:14136-14155 Msa1428740:CDS 30.0%
TATTGAGAAACAGTATGTCA+TGG + tig0026409:14216-14235 Msa1428740:CDS 30.0%
TATTGAAAATCATGGTGAAG+CGG + tig0026409:14603-14622 Msa1428740:CDS 30.0%
AAAGTAAATCTGCTATCAAG+TGG + tig0026409:14680-14699 Msa1428740:CDS 30.0%
CAAAAGAATCTTATGGATCT+GGG + tig0026409:14715-14734 Msa1428740:CDS 30.0%
ATTCATCAGGGAAATCAAAA+GGG - tig0026409:14885-14904 None:intergenic 30.0%
AAGAGAAACCTGATCTTAAA+AGG + tig0026409:15001-15020 Msa1428740:CDS 30.0%
AGAGAAACCTGATCTTAAAA+GGG + tig0026409:15002-15021 Msa1428740:CDS 30.0%
!!! AAAAAGATGCATTTTTTCGG+AGG + tig0026409:15055-15074 Msa1428740:CDS 30.0%
! AAGAGAGGCATGATATTAAT+TGG + tig0026409:15124-15143 Msa1428740:CDS 30.0%
ATGAGAGGAAATTAAGTGAA+CGG + tig0026409:15277-15296 Msa1428740:CDS 30.0%
TTAGATGTTAATTCAGTCTC+TGG - tig0026409:15312-15331 None:intergenic 30.0%
ATCTATATCTTCAGATTCCT+CGG - tig0026409:16039-16058 None:intergenic 30.0%
TGCATAGATGAACTATTAGA+AGG - tig0026409:16452-16471 None:intergenic 30.0%
!! TCTAAATGTTCTGTTTCTAC+TGG - tig0026409:16500-16519 None:intergenic 30.0%
! CTTGAACTTCTTTTGCTTTA+AGG + tig0026409:16715-16734 Msa1428740:intron 30.0%
TGCTTGGGTTAAAAAAGAAT+AGG - tig0026409:16817-16836 None:intergenic 30.0%
!!! TCTTTTTTAACCCAAGCAAT+TGG + tig0026409:16819-16838 Msa1428740:intron 30.0%
ACAAGAATATTATCAGTAGG+AGG - tig0026409:16862-16881 None:intergenic 30.0%
! TTCTTGTTGAAGTTGAGTTT+TGG + tig0026409:16875-16894 Msa1428740:intron 30.0%
ACTCCTAATCCTAAATTAGT+AGG + tig0026409:17010-17029 Msa1428740:intron 30.0%
CTCCTAATCCTAAATTAGTA+GGG + tig0026409:17011-17030 Msa1428740:intron 30.0%
! TTCCCTACTAATTTAGGATT+AGG - tig0026409:17016-17035 None:intergenic 30.0%
TCCTAAATTAGTAGGGAAAT+CGG + tig0026409:17018-17037 Msa1428740:intron 30.0%
TCATTGGAAATCAAAATCTG+AGG - tig0026409:17272-17291 None:intergenic 30.0%
ATAATAACAGAAAACACAGC+TGG - tig0026409:17607-17626 None:intergenic 30.0%
TTGGAAGTTTATAAGCATCA+TGG + tig0026409:17967-17986 Msa1428740:CDS 30.0%
TGGAAGTTTATAAGCATCAT+GGG + tig0026409:17968-17987 Msa1428740:CDS 30.0%
!!! AGTTTTGTTGTGCTTCATTT+TGG - tig0026409:18011-18030 None:intergenic 30.0%
TTATATGAAGGATATTGACG+AGG + tig0026409:18092-18111 Msa1428740:CDS 30.0%
AGCAACATCAATATCTTCTA+GGG - tig0026409:18451-18470 None:intergenic 30.0%
AAGCAACATCAATATCTTCT+AGG - tig0026409:18452-18471 None:intergenic 30.0%
GAATCATTTGATGTATCAAC+CGG + tig0026409:18579-18598 Msa1428740:CDS 30.0%
! ACATTTTCCAATTTACCAAC+TGG - tig0026409:18627-18646 None:intergenic 30.0%
TTGGAAAATGTATCCATTAG+CGG + tig0026409:18636-18655 Msa1428740:CDS 30.0%
ATAAGGAAAAATCTCACAGT+AGG + tig0026409:18667-18686 Msa1428740:CDS 30.0%
!!! TGAGTTTTTTTCTTCGGAAA+TGG + tig0026409:18792-18811 Msa1428740:three_prime_UTR 30.0%
!!! GAGTTTTTTTCTTCGGAAAT+GGG + tig0026409:18793-18812 Msa1428740:three_prime_UTR 30.0%
! GTTTCTTCAAGAATGAGTTT+TGG + tig0026409:18902-18921 Msa1428740:three_prime_UTR 30.0%
TTGTGTAGTCCAAAAGAAAT+TGG + tig0026409:19029-19048 Msa1428740:three_prime_UTR 30.0%
CAAAGAGGAAGAAAATAAGT+CGG - tig0026409:19143-19162 None:intergenic 30.0%
! TTGAAAAAAGAGAGAGTGTG+GGG - tig0026409:13103-13122 None:intergenic 35.0%
GTTTGAAAAAAGAGAGAGTG+TGG - tig0026409:13105-13124 None:intergenic 35.0%
ATTGGATATGTGACCTTTGT+TGG - tig0026409:13127-13146 None:intergenic 35.0%
ACCAGAAATCAAGGATATGT+GGG - tig0026409:13238-13257 None:intergenic 35.0%
AAAAGACTCACCAGAAATCA+AGG - tig0026409:13247-13266 None:intergenic 35.0%
!! AACTATTGATGATGGATCAC+TGG + tig0026409:13496-13515 Msa1428740:intron 35.0%
!! TGGATCACTGGATCTTATTT+TGG + tig0026409:13508-13527 Msa1428740:intron 35.0%
!!! GGATCACTGGATCTTATTTT+GGG + tig0026409:13509-13528 Msa1428740:intron 35.0%
AGTTATCAAAGAGAAGGAGA+TGG + tig0026409:13589-13608 Msa1428740:exon 35.0%
GTTATCAAAGAGAAGGAGAT+GGG + tig0026409:13590-13609 Msa1428740:exon 35.0%
ATGGGATCAGTGATTGAAAT+TGG + tig0026409:13608-13627 Msa1428740:CDS 35.0%
! TTGCCATCATCCATTTCTTT+TGG + tig0026409:13685-13704 Msa1428740:CDS 35.0%
! TGCCATCATCCATTTCTTTT+GGG + tig0026409:13686-13705 Msa1428740:CDS 35.0%
AACCCAAAAGAAATGGATGA+TGG - tig0026409:13691-13710 None:intergenic 35.0%
! TTTTCAAACTCAGGCACATT+TGG - tig0026409:13836-13855 None:intergenic 35.0%
AAATGTGCCTGAGTTTGAAA+AGG + tig0026409:13835-13854 Msa1428740:CDS 35.0%
! GTCGTTTCAAACTGGATTTT+CGG + tig0026409:13883-13902 Msa1428740:CDS 35.0%
! TTTCAAACTGGATTTTCGGA+GGG + tig0026409:13887-13906 Msa1428740:CDS 35.0%
CTCATCTCTATCAGAAACAA+TGG - tig0026409:13918-13937 None:intergenic 35.0%
AGAAGTGATATTGAAGAGAG+TGG + tig0026409:13968-13987 Msa1428740:CDS 35.0%
TGTTAAAGATGATAGGAGTG+AGG + tig0026409:14015-14034 Msa1428740:CDS 35.0%
AGCATGAGAACGAAGTAAAA+GGG + tig0026409:14095-14114 Msa1428740:CDS 35.0%
AAGTAAAAGGGGATGTAGAA+AGG + tig0026409:14107-14126 Msa1428740:CDS 35.0%
AGTAAAAGGGGATGTAGAAA+GGG + tig0026409:14108-14127 Msa1428740:CDS 35.0%
AAATTGAGAATGGGAAAGCT+CGG + tig0026409:14269-14288 Msa1428740:CDS 35.0%
GGGTTTGATTCATTTAAGGA+AGG + tig0026409:14298-14317 Msa1428740:CDS 35.0%
CAGATTTACTTTCATCCTCT+TGG - tig0026409:14672-14691 None:intergenic 35.0%
GGATGACCAAAAGAATCTTA+TGG + tig0026409:14708-14727 Msa1428740:CDS 35.0%
! CCAGATCCATAAGATTCTTT+TGG - tig0026409:14717-14736 None:intergenic 35.0%
CCAAAAGAATCTTATGGATC+TGG + tig0026409:14714-14733 Msa1428740:CDS 35.0%
CTATAAGACTTTCCAATCGT+CGG - tig0026409:14762-14781 None:intergenic 35.0%
! GATTGGAAAGTCTTATAGCT+AGG + tig0026409:14764-14783 Msa1428740:CDS 35.0%
! AAGTCTTATAGCTAGGAGAA+TGG + tig0026409:14771-14790 Msa1428740:CDS 35.0%
GATTCATCAGGGAAATCAAA+AGG - tig0026409:14886-14905 None:intergenic 35.0%
GATCAGGTTTCTCTTCATTT+GGG - tig0026409:14996-15015 None:intergenic 35.0%
AGATCAGGTTTCTCTTCATT+TGG - tig0026409:14997-15016 None:intergenic 35.0%
!!! AAACTGTCCCTTTTAAGATC+AGG - tig0026409:15012-15031 None:intergenic 35.0%
!! AGGCATGAAAGTTTTAGCAT+GGG + tig0026409:15075-15094 Msa1428740:CDS 35.0%
TTAGATATCCCCAATACTGA+AGG - tig0026409:15102-15121 None:intergenic 35.0%
ATCCTTTCAGATACAAACAC+AGG - tig0026409:15153-15172 None:intergenic 35.0%
TGTGTTTGTATCTGAAAGGA+TGG + tig0026409:15152-15171 Msa1428740:CDS 35.0%
TGTATCTGAAAGGATGGTTT+CGG + tig0026409:15158-15177 Msa1428740:CDS 35.0%
TGAGAGGAAATTAAGTGAAC+GGG + tig0026409:15278-15297 Msa1428740:CDS 35.0%
! CACAGATTCATTTTCTTCAG+AGG - tig0026409:15376-15395 None:intergenic 35.0%
! CTCTGAAGAAAATGAATCTG+TGG + tig0026409:15374-15393 Msa1428740:CDS 35.0%
GCACTATTTCATCTTCATCA+CGG - tig0026409:15431-15450 None:intergenic 35.0%
GATGAAGATGAAATAGTGCT+CGG + tig0026409:15432-15451 Msa1428740:CDS 35.0%
GGATAAAATTCCATCTCAGA+AGG - tig0026409:15471-15490 None:intergenic 35.0%
! ATGGAATTTTATCCTGCAAC+AGG + tig0026409:15477-15496 Msa1428740:CDS 35.0%
!!! GTTTTTTCTGATTCCTCATC+AGG - tig0026409:15624-15643 None:intergenic 35.0%
TCAAACTTCCAGCATATAAG+TGG + tig0026409:15747-15766 Msa1428740:CDS 35.0%
TTATCCTCCAGTTTGTCATT+GGG - tig0026409:15945-15964 None:intergenic 35.0%
ATTATCCTCCAGTTTGTCAT+TGG - tig0026409:15946-15965 None:intergenic 35.0%
CGGAAGTCAAAAATGAAATG+AGG + tig0026409:16012-16031 Msa1428740:CDS 35.0%
TTGATCAAAATAGACCTGCA+AGG + tig0026409:16108-16127 Msa1428740:CDS 35.0%
TGATCAAAATAGACCTGCAA+GGG + tig0026409:16109-16128 Msa1428740:CDS 35.0%
! TCCAACTTTTCTCTGGATAT+TGG + tig0026409:16149-16168 Msa1428740:CDS 35.0%
TCCAATATCCAGAGAAAAGT+TGG - tig0026409:16153-16172 None:intergenic 35.0%
TCTGGATATTGGATCAGAAA+AGG + tig0026409:16160-16179 Msa1428740:CDS 35.0%
CTGGATATTGGATCAGAAAA+GGG + tig0026409:16161-16180 Msa1428740:CDS 35.0%
! TTCAGGTTTGTTTCATGAAC+AGG + tig0026409:16193-16212 Msa1428740:CDS 35.0%
TTTCAGAATCAGCAGATATG+TGG - tig0026409:16229-16248 None:intergenic 35.0%
AATGCTTCATCAAGACAATG+TGG + tig0026409:16247-16266 Msa1428740:CDS 35.0%
TCCAGATTCAAACTATCATC+TGG + tig0026409:16274-16293 Msa1428740:CDS 35.0%
TATGTTGGATAATGAGTCTG+TGG + tig0026409:16313-16332 Msa1428740:CDS 35.0%
AGTTCATCTATGCATGCATT+AGG + tig0026409:16458-16477 Msa1428740:CDS 35.0%
GTTCATCTATGCATGCATTA+GGG + tig0026409:16459-16478 Msa1428740:CDS 35.0%
TTCATCTATGCATGCATTAG+GGG + tig0026409:16460-16479 Msa1428740:CDS 35.0%
AAGACTTTATCCTGTTCGAT+CGG - tig0026409:16554-16573 None:intergenic 35.0%
GATGATTCTTATCCAGATCT+TGG - tig0026409:16616-16635 None:intergenic 35.0%
! TCTGTCAAGCTCTGATAAAT+TGG + tig0026409:16634-16653 Msa1428740:CDS 35.0%
! ACCGATTTCCCTACTAATTT+AGG - tig0026409:17022-17041 None:intergenic 35.0%
TAATATGGAAACTGATCCTG+CGG + tig0026409:17066-17085 Msa1428740:intron 35.0%
ATGTATCTTAGATTATCCGC+AGG - tig0026409:17085-17104 None:intergenic 35.0%
! TAAGATTAGAAACTGGTCTG+AGG + tig0026409:17104-17123 Msa1428740:intron 35.0%
CCTATTGAATTGGGATTTCT+GGG - tig0026409:17402-17421 None:intergenic 35.0%
! TGATGCTAGCCTATTGAATT+GGG - tig0026409:17411-17430 None:intergenic 35.0%
AGCAAATAGATGTCAAACAG+AGG + tig0026409:17508-17527 Msa1428740:intron 35.0%
! CATGCACATGATTGATAATC+CGG + tig0026409:17632-17651 Msa1428740:intron 35.0%
!! CATTTGTTTGGTGTAAAGTG+AGG + tig0026409:17709-17728 Msa1428740:intron 35.0%
GCAGAATTCTGATAACATTC+TGG + tig0026409:17792-17811 Msa1428740:intron 35.0%
! CATAACGGGAGTTTCATATA+AGG - tig0026409:17881-17900 None:intergenic 35.0%
AGTCACAGAAGAGATCATAA+CGG - tig0026409:17896-17915 None:intergenic 35.0%
GGAAGTTTATAAGCATCATG+GGG + tig0026409:17969-17988 Msa1428740:CDS 35.0%
AGTGATCTTACTTCAAGAAC+TGG - tig0026409:18276-18295 None:intergenic 35.0%
! GCTTTTAAGCAACTTCAAGA+AGG + tig0026409:18312-18331 Msa1428740:CDS 35.0%
AGCTGATCCTTAATTGTACT+CGG - tig0026409:18363-18382 None:intergenic 35.0%
! ATCAATATCTTCTAGGGATC+TGG - tig0026409:18445-18464 None:intergenic 35.0%
AAACTGGAAGCAAATGAAGA+TGG + tig0026409:18540-18559 Msa1428740:CDS 35.0%
! TTTGAGTTTCTTTCTAGCCT+CGG + tig0026409:18818-18837 Msa1428740:three_prime_UTR 35.0%
!!! TCTTGAAGCTTGCAGTTTTT+TGG + tig0026409:18932-18951 Msa1428740:three_prime_UTR 35.0%
! TTTCTTTTGGACTACACAAG+AGG - tig0026409:19028-19047 None:intergenic 35.0%
GGAAGAAAATAAGTCGGAAA+AGG - tig0026409:19137-19156 None:intergenic 35.0%
TCCCACATATCCTTGATTTC+TGG + tig0026409:13234-13253 Msa1428740:five_prime_UTR 40.0%
CACCAGAAATCAAGGATATG+TGG - tig0026409:13239-13258 None:intergenic 40.0%
GGGAAGAGTTATCAAAGAGA+AGG + tig0026409:13583-13602 Msa1428740:five_prime_UTR 40.0%
! CTCTCTTCCTTTTCAAACTC+AGG - tig0026409:13845-13864 None:intergenic 40.0%
AAGGAAGAGAGAGTTACTCA+TGG + tig0026409:13854-13873 Msa1428740:CDS 40.0%
GGTATTTCGTCGTTTCAAAC+TGG + tig0026409:13875-13894 Msa1428740:CDS 40.0%
! GTTTCAAACTGGATTTTCGG+AGG + tig0026409:13886-13905 Msa1428740:CDS 40.0%
!! GATGAGAGCTATTTTGTGAG+AGG + tig0026409:13932-13951 Msa1428740:CDS 40.0%
! TGGTGGGTGTTAAAGATGAT+AGG + tig0026409:14008-14027 Msa1428740:CDS 40.0%
CAGCATGAGAACGAAGTAAA+AGG + tig0026409:14094-14113 Msa1428740:CDS 40.0%
GCATGAGAACGAAGTAAAAG+GGG + tig0026409:14096-14115 Msa1428740:CDS 40.0%
!!! TTTTGACTTAGGAAAGGGCA+AGG + tig0026409:14141-14160 Msa1428740:CDS 40.0%
TTGAAACAACTTCGGATGTG+AGG - tig0026409:14183-14202 None:intergenic 40.0%
GTCGTCACTTGAAACAACTT+CGG - tig0026409:14191-14210 None:intergenic 40.0%
AATTGAGAATGGGAAAGCTC+GGG + tig0026409:14270-14289 Msa1428740:CDS 40.0%
! AGGCGGGTTTGATTCATTTA+AGG + tig0026409:14294-14313 Msa1428740:CDS 40.0%
ATTGTTCACCCAGTTCATCT+TGG + tig0026409:14329-14348 Msa1428740:CDS 40.0%
CATCTACATCTAAAAGTGGG+TGG - tig0026409:14471-14490 None:intergenic 40.0%
GGGCATCTACATCTAAAAGT+GGG - tig0026409:14474-14493 None:intergenic 40.0%
!!! GTCGCTTTTCTGAGATTTCT+CGG - tig0026409:14539-14558 None:intergenic 40.0%
!! AGAAGATGGTGTTGATGAAG+AGG + tig0026409:14627-14646 Msa1428740:CDS 40.0%
TGATGAAGAGGAAGAAGCAA+TGG + tig0026409:14639-14658 Msa1428740:CDS 40.0%
TCTTATGGATCTGGGAACTT+TGG + tig0026409:14723-14742 Msa1428740:CDS 40.0%
TTATAGCTAGGAGAATGGCA+AGG + tig0026409:14776-14795 Msa1428740:CDS 40.0%
GAAATAGGCGCAACATTAGA+GGG - tig0026409:14850-14869 None:intergenic 40.0%
AGAAATAGGCGCAACATTAG+AGG - tig0026409:14851-14870 None:intergenic 40.0%
GGGTTTCGTCTAACAGAAAT+AGG - tig0026409:14865-14884 None:intergenic 40.0%
TTCCCTGATGAATCTTATGC+TGG + tig0026409:14892-14911 Msa1428740:CDS 40.0%
TGCCAGCATAAGATTCATCA+GGG - tig0026409:14897-14916 None:intergenic 40.0%
ATGCCAGCATAAGATTCATC+AGG - tig0026409:14898-14917 None:intergenic 40.0%
TGATGAATCTTATGCTGGCA+TGG + tig0026409:14897-14916 Msa1428740:CDS 40.0%
GATGAATCTTATGCTGGCAT+GGG + tig0026409:14898-14917 Msa1428740:CDS 40.0%
ATGTCAAAAGGGTTTCGTCT+AGG - tig0026409:14964-14983 None:intergenic 40.0%
TTCTCTTCATTTGGGTCGTA+CGG - tig0026409:14988-15007 None:intergenic 40.0%
!! GAGGCATGAAAGTTTTAGCA+TGG + tig0026409:15074-15093 Msa1428740:CDS 40.0%
AGCCTGTGTTTGTATCTGAA+AGG + tig0026409:15148-15167 Msa1428740:CDS 40.0%
TTACTTCACTAGATTGCCTC+TGG - tig0026409:15200-15219 None:intergenic 40.0%
GAATCTGTGGAGATGATAGA+AGG + tig0026409:15387-15406 Msa1428740:CDS 40.0%
ATCGACGAGCAATTCAATGA+TGG + tig0026409:15510-15529 Msa1428740:CDS 40.0%
TCGACGAGCAATTCAATGAT+GGG + tig0026409:15511-15530 Msa1428740:CDS 40.0%
TGTCGTCAATCACTTCTGAT+CGG - tig0026409:15599-15618 None:intergenic 40.0%
GCAAATTTGCAGCATGAAGA+TGG + tig0026409:15645-15664 Msa1428740:CDS 40.0%
AACTTCAACCCAAACTTCAG+TGG + tig0026409:15686-15705 Msa1428740:CDS 40.0%
TGATTCCTCCACTGAAGTTT+GGG - tig0026409:15697-15716 None:intergenic 40.0%
TTGATTCCTCCACTGAAGTT+TGG - tig0026409:15698-15717 None:intergenic 40.0%
TTGATTCCTCGACTGAAGTT+CGG - tig0026409:15731-15750 None:intergenic 40.0%
AGTCATAAACTGGTACCAGT+GGG - tig0026409:15788-15807 None:intergenic 40.0%
GATATAAGCTGTTCTGCTGA+GGG - tig0026409:15819-15838 None:intergenic 40.0%
AGATATAAGCTGTTCTGCTG+AGG - tig0026409:15820-15839 None:intergenic 40.0%
TGTTGCTGAATCAGAAGACA+AGG - tig0026409:15850-15869 None:intergenic 40.0%
!! AGCAACAGAGTTTTCTGAGA+CGG + tig0026409:15863-15882 Msa1428740:CDS 40.0%
CAAAAATGAAATGAGGTCCG+AGG + tig0026409:16019-16038 Msa1428740:CDS 40.0%
TCAGTACAATGTTACTGCAG+AGG + tig0026409:16058-16077 Msa1428740:CDS 40.0%
! TGTGGATTCCAACTTTTCTC+TGG + tig0026409:16142-16161 Msa1428740:CDS 40.0%
! GAAAAGGGTGTAACTGATTC+AGG + tig0026409:16176-16195 Msa1428740:CDS 40.0%
GCCAGATGATAGTTTGAATC+TGG - tig0026409:16278-16297 None:intergenic 40.0%
!! AAGTCTTGTTGTCAAGTTCC+AGG + tig0026409:16567-16586 Msa1428740:CDS 40.0%
!! AGTCTTGTTGTCAAGTTCCA+GGG + tig0026409:16568-16587 Msa1428740:CDS 40.0%
! ATCCAGATCTTGGTGGATAA+TGG - tig0026409:16606-16625 None:intergenic 40.0%
GATTCTTATCCAGATCTTGG+TGG - tig0026409:16613-16632 None:intergenic 40.0%
ACAACGACTTCCAATTGCTT+GGG - tig0026409:16832-16851 None:intergenic 40.0%
TACAACGACTTCCAATTGCT+TGG - tig0026409:16833-16852 None:intergenic 40.0%
! AAGGCTTGGTTGTTATTGCA+CGG - tig0026409:17179-17198 None:intergenic 40.0%
! ATCAAAATCTGAGGTACCCT+AGG - tig0026409:17263-17282 None:intergenic 40.0%
! TGGGATTTCTGGGTATTCAA+GGG - tig0026409:17392-17411 None:intergenic 40.0%
! TTGGGATTTCTGGGTATTCA+AGG - tig0026409:17393-17412 None:intergenic 40.0%
CCCAGAAATCCCAATTCAAT+AGG + tig0026409:17399-17418 Msa1428740:intron 40.0%
GCCTATTGAATTGGGATTTC+TGG - tig0026409:17403-17422 None:intergenic 40.0%
! CTGATGCTAGCCTATTGAAT+TGG - tig0026409:17412-17431 None:intergenic 40.0%
TCAATAGGCTAGCATCAGAT+AGG + tig0026409:17414-17433 Msa1428740:intron 40.0%
GATGTCAAACAGAGGATACT+TGG + tig0026409:17516-17535 Msa1428740:intron 40.0%
CTGCTTGCATTGCATTTGTT+TGG + tig0026409:17697-17716 Msa1428740:intron 40.0%
CAATTCTCCAACTCCATCAT+TGG - tig0026409:17845-17864 None:intergenic 40.0%
GTCACAGAAGAGATCATAAC+GGG - tig0026409:17895-17914 None:intergenic 40.0%
AAACTTAGTTCCTTCAGCAG+AGG + tig0026409:18026-18045 Msa1428740:CDS 40.0%
AACTTAGTTCCTTCAGCAGA+GGG + tig0026409:18027-18046 Msa1428740:CDS 40.0%
CGAGGAATTCTTGTCAGAAT+TGG + tig0026409:18110-18129 Msa1428740:CDS 40.0%
TTGTCAGAATTGGACACAGT+TGG + tig0026409:18120-18139 Msa1428740:CDS 40.0%
TGTCAGAATTGGACACAGTT+GGG + tig0026409:18121-18140 Msa1428740:CDS 40.0%
!! ACAGTTGGGGATTTTAGTGT+CGG + tig0026409:18135-18154 Msa1428740:CDS 40.0%
! GAGCATCTCTAGTTTCTTCA+TGG - tig0026409:18194-18213 None:intergenic 40.0%
!!! TCTGCTGTTTTTACATCCTC+AGG - tig0026409:18231-18250 None:intergenic 40.0%
TGAGGATGTAAAAACAGCAG+AGG + tig0026409:18230-18249 Msa1428740:CDS 40.0%
CATCCTTCCGAGTACAATTA+AGG + tig0026409:18353-18372 Msa1428740:CDS 40.0%
GATCCTTAATTGTACTCGGA+AGG - tig0026409:18359-18378 None:intergenic 40.0%
TGATGAATCTAGAGATCACG+TGG + tig0026409:18389-18408 Msa1428740:CDS 40.0%
TCTTCTGCATCTCTTTCTTC+TGG - tig0026409:18510-18529 None:intergenic 40.0%
AGAAGATGCTTCAGTCAAAC+TGG + tig0026409:18524-18543 Msa1428740:CDS 40.0%
!! CAGAACTCCAGTTGGTAAAT+TGG + tig0026409:18617-18636 Msa1428740:CDS 40.0%
CTTATTACTAGAGCCGCTAA+TGG - tig0026409:18652-18671 None:intergenic 40.0%
! CATTAGCGGCTCTAGTAATA+AGG + tig0026409:18650-18669 Msa1428740:CDS 40.0%
TCGCTCAAAATGACTTCTCT+CGG - tig0026409:18740-18759 None:intergenic 40.0%
ACCAAATTGCTCACACTGAA+GGG - tig0026409:18968-18987 None:intergenic 40.0%
TACCAAATTGCTCACACTGA+AGG - tig0026409:18969-18988 None:intergenic 40.0%
ATACATCAAGTAGCCGTTTC+TGG + tig0026409:19108-19127 Msa1428740:three_prime_UTR 40.0%
TACATCAAGTAGCCGTTTCT+GGG + tig0026409:19109-19128 Msa1428740:three_prime_UTR 40.0%
! AAAAAAGAGAGAGTGTGGGG+CGG - tig0026409:13100-13119 None:intergenic 45.0%
AGAGCAGTGCAGACTAAAAC+AGG - tig0026409:13782-13801 None:intergenic 45.0%
! TTGGGACCCTTCTCAGTTTT+GGG + tig0026409:13807-13826 Msa1428740:CDS 45.0%
GTTGAAGAAGCGAGTTTGGT+GGG + tig0026409:13992-14011 Msa1428740:CDS 45.0%
GATAGGAGTGAGGATGATCA+TGG + tig0026409:14025-14044 Msa1428740:CDS 45.0%
TTTGCTTTATGACTCTGCGC+TGG + tig0026409:14048-14067 Msa1428740:CDS 45.0%
!! GCTGGATGATGTTAACTTGC+AGG + tig0026409:14066-14085 Msa1428740:CDS 45.0%
AAGGGCAAGGAAGTTCATGA+CGG + tig0026409:14154-14173 Msa1428740:CDS 45.0%
ATTGAGAATGGGAAAGCTCG+GGG + tig0026409:14271-14290 Msa1428740:CDS 45.0%
CACCCAGTTCATCTTGGAAA+CGG + tig0026409:14335-14354 Msa1428740:CDS 45.0%
ACCCAGTTCATCTTGGAAAC+GGG + tig0026409:14336-14355 Msa1428740:CDS 45.0%
ACCCGTTTCCAAGATGAACT+GGG - tig0026409:14340-14359 None:intergenic 45.0%
! AAGACGACTCTGAGGATTCA+GGG + tig0026409:14377-14396 Msa1428740:CDS 45.0%
TGAGGATTCAGGGTCTGATA+GGG + tig0026409:14387-14406 Msa1428740:CDS 45.0%
CATTGGAATGATGTCAGCCA+TGG - tig0026409:14437-14456 None:intergenic 45.0%
! GGGGCATCTACATCTAAAAG+TGG - tig0026409:14475-14494 None:intergenic 45.0%
ATGCAGCATCAGAACCATCA+CGG - tig0026409:14516-14535 None:intergenic 45.0%
TGAAGAGGAAGAAGCAATGG+AGG + tig0026409:14642-14661 Msa1428740:CDS 45.0%
GAAGAGGAAGAAGCAATGGA+GGG + tig0026409:14643-14662 Msa1428740:CDS 45.0%
ATCTGCTATCAAGTGGACAG+AGG + tig0026409:14687-14706 Msa1428740:CDS 45.0%
!! TGGGAACTTTGGAGCTTGAA+AGG + tig0026409:14734-14753 Msa1428740:CDS 45.0%
CGCAACATTAGAGGGAACAT+CGG - tig0026409:14842-14861 None:intergenic 45.0%
AGGCTGTAGAATAGATGGAG+CGG - tig0026409:14944-14963 None:intergenic 45.0%
CGTCTAGGCTGTAGAATAGA+TGG - tig0026409:14949-14968 None:intergenic 45.0%
GGTCGTACGGAATGTCAAAA+GGG - tig0026409:14975-14994 None:intergenic 45.0%
TAGCATGGGACCTTCAGTAT+TGG + tig0026409:15089-15108 Msa1428740:CDS 45.0%
AGCATGGGACCTTCAGTATT+GGG + tig0026409:15090-15109 Msa1428740:CDS 45.0%
TGGGGATATCTAAGCAAGAG+AGG + tig0026409:15109-15128 Msa1428740:CDS 45.0%
ATCTGAAAGGATGGTTTCGG+AGG + tig0026409:15161-15180 Msa1428740:CDS 45.0%
TCTGAAAGGATGGTTTCGGA+GGG + tig0026409:15162-15181 Msa1428740:CDS 45.0%
! AGGGAACAAGCTATTTCCAG+AGG + tig0026409:15181-15200 Msa1428740:CDS 45.0%
!! GAACTTGCTGACTCAGTATC+TGG - tig0026409:15246-15265 None:intergenic 45.0%
GATACTGAGTCAGCAAGTTC+AGG + tig0026409:15246-15265 Msa1428740:CDS 45.0%
TTTGGATGGCGTTTCTGTTG+AGG + tig0026409:15332-15351 Msa1428740:CDS 45.0%
TGTGGAGATGATAGAAGGTG+AGG + tig0026409:15392-15411 Msa1428740:CDS 45.0%
GAAGATGAAATAGTGCTCGG+TGG + tig0026409:15435-15454 Msa1428740:CDS 45.0%
! AGTGGAAGATCCTTCTGAGA+TGG + tig0026409:15458-15477 Msa1428740:CDS 45.0%
ATTTCAAGCTCTCCTGTTGC+AGG - tig0026409:15492-15511 None:intergenic 45.0%
CGACGAGCAATTCAATGATG+GGG + tig0026409:15512-15531 Msa1428740:CDS 45.0%
GTCAATCACTTCTGATCGGT+AGG - tig0026409:15595-15614 None:intergenic 45.0%
GATTGACGACATACCTGATG+AGG + tig0026409:15608-15627 Msa1428740:CDS 45.0%
GGGTTGAAGTTCTCGATTCT+GGG - tig0026409:15677-15696 None:intergenic 45.0%
! TGGGTTGAAGTTCTCGATTC+TGG - tig0026409:15678-15697 None:intergenic 45.0%
TTCAACCCAAACTTCAGTGG+AGG + tig0026409:15689-15708 Msa1428740:CDS 45.0%
TGATTCCTCGACTGAAGTTC+GGG - tig0026409:15730-15749 None:intergenic 45.0%
CTTCCAGCATATAAGTGGTG+AGG + tig0026409:15752-15771 Msa1428740:CDS 45.0%
GTCATAAACTGGTACCAGTG+GGG - tig0026409:15787-15806 None:intergenic 45.0%
CAGTCATAAACTGGTACCAG+TGG - tig0026409:15789-15808 None:intergenic 45.0%
!! GTAGTATCGACTGAGACAGT+AGG - tig0026409:15894-15913 None:intergenic 45.0%
AGTCGATACTACTGCTGATG+TGG + tig0026409:15902-15921 Msa1428740:CDS 45.0%
GTACAAGCCCAATGACAAAC+TGG + tig0026409:15935-15954 Msa1428740:CDS 45.0%
! TTTGACTTCCGCATGCAGTT+CGG - tig0026409:16003-16022 None:intergenic 45.0%
GTTGGATAATGAGTCTGTGG+AGG + tig0026409:16316-16335 Msa1428740:CDS 45.0%
AGATGAAATGCCAGATTCCG+TGG + tig0026409:16406-16425 Msa1428740:CDS 45.0%
GTGATGAGAATCAGAAGCCA+CGG - tig0026409:16426-16445 None:intergenic 45.0%
ACGCATATTTCCGATCGAAC+AGG + tig0026409:16541-16560 Msa1428740:CDS 45.0%
CACCATTATCCACCAAGATC+TGG + tig0026409:16601-16620 Msa1428740:CDS 45.0%
CTGACTTTCATCGTGATCAC+TGG - tig0026409:16675-16694 None:intergenic 45.0%
CAGTGATCACGATGAAAGTC+AGG + tig0026409:16673-16692 Msa1428740:CDS 45.0%
! CAACCAAGCCTTATCTCACT+AGG + tig0026409:17187-17206 Msa1428740:intron 45.0%
GCATACCACCTAGTGAGATA+AGG - tig0026409:17198-17217 None:intergenic 45.0%
!! TTGCAACTGTATTGGCTCCT+AGG + tig0026409:17243-17262 Msa1428740:intron 45.0%
!! TGCAACTGTATTGGCTCCTA+GGG + tig0026409:17244-17263 Msa1428740:intron 45.0%
TTAGCAGTCTCAGTAGGAGA+TGG - tig0026409:17369-17388 None:intergenic 45.0%
CATTCTGGTAGAACCTTCAC+AGG + tig0026409:17807-17826 Msa1428740:CDS 45.0%
TCCAAATCCACTTCACCAGT+GGG - tig0026409:17952-17971 None:intergenic 45.0%
TTCCAAATCCACTTCACCAG+TGG - tig0026409:17953-17972 None:intergenic 45.0%
GTCAGAATTGGACACAGTTG+GGG + tig0026409:18122-18141 Msa1428740:CDS 45.0%
!!! GATTTTAGTGTCGGTGATGC+TGG + tig0026409:18144-18163 Msa1428740:CDS 45.0%
TCAACTTAGTTCACTGCCTG+AGG + tig0026409:18212-18231 Msa1428740:CDS 45.0%
AAAAACAGCAGAGGTTGAGC+AGG + tig0026409:18239-18258 Msa1428740:CDS 45.0%
! ATCTGGCTTCAATGACTGGA+AGG - tig0026409:18428-18447 None:intergenic 45.0%
ACCCTTCAGTGTGAGCAATT+TGG + tig0026409:18964-18983 Msa1428740:three_prime_UTR 45.0%
TACACAAGAGGCAACACTGT+TGG - tig0026409:19016-19035 None:intergenic 45.0%
TCGGAAAAGGAACCCAGAAA+CGG - tig0026409:19124-19143 None:intergenic 45.0%
!!! ATAAAAATTAGATTTTTTTT+AGG - tig0026409:13341-13360 None:intergenic 5.0%
TCTGCACTGCTCTTCTGCTT+GGG + tig0026409:13789-13808 Msa1428740:CDS 50.0%
! CTTGGGACCCTTCTCAGTTT+TGG + tig0026409:13806-13825 Msa1428740:CDS 50.0%
TGGCTGCCCAAAACTGAGAA+GGG - tig0026409:13816-13835 None:intergenic 50.0%
TTGGCTGCCCAAAACTGAGA+AGG - tig0026409:13817-13836 None:intergenic 50.0%
! TGGCGTTGAAGAAGCGAGTT+TGG + tig0026409:13988-14007 Msa1428740:CDS 50.0%
CGTTGAAGAAGCGAGTTTGG+TGG + tig0026409:13991-14010 Msa1428740:CDS 50.0%
AGGGCAAGGAAGTTCATGAC+GGG + tig0026409:14155-14174 Msa1428740:CDS 50.0%
CACCCGTTTCCAAGATGAAC+TGG - tig0026409:14341-14360 None:intergenic 50.0%
CAGTTCATCTTGGAAACGGG+TGG + tig0026409:14339-14358 Msa1428740:CDS 50.0%
CACTGATGAAGACGACTCTG+AGG + tig0026409:14369-14388 Msa1428740:CDS 50.0%
! GAAGACGACTCTGAGGATTC+AGG + tig0026409:14376-14395 Msa1428740:CDS 50.0%
CTGAGGATTCAGGGTCTGAT+AGG + tig0026409:14386-14405 Msa1428740:CDS 50.0%
TTCTTCACCGGATGCTTCCA+TGG + tig0026409:14417-14436 Msa1428740:CDS 50.0%
!! ATGTCAGCCATGGAAGCATC+CGG - tig0026409:14427-14446 None:intergenic 50.0%
TGCAGCATCAGAACCATCAC+GGG - tig0026409:14515-14534 None:intergenic 50.0%
CATGGTGAAGCGGAAGAAGA+TGG + tig0026409:14613-14632 Msa1428740:CDS 50.0%
GCTTGAAAGGAACCGACGAT+TGG + tig0026409:14747-14766 Msa1428740:CDS 50.0%
ATGGGATTACCACCCATTCC+TGG + tig0026409:14916-14935 Msa1428740:CDS 50.0%
AGAATAGATGGAGCGGAACC+AGG - tig0026409:14937-14956 None:intergenic 50.0%
GGGTCGTACGGAATGTCAAA+AGG - tig0026409:14976-14995 None:intergenic 50.0%
GCATGGGACCTTCAGTATTG+GGG + tig0026409:15091-15110 Msa1428740:CDS 50.0%
GTCAGCAAGTTCAGGTGATC+AGG + tig0026409:15254-15273 Msa1428740:CDS 50.0%
GTTCAGGTGATCAGGATGAG+AGG + tig0026409:15262-15281 Msa1428740:CDS 50.0%
! GTTTCTGTTGAGGCTGGTCA+TGG + tig0026409:15342-15361 Msa1428740:CDS 50.0%
! TGAAATAGTGCTCGGTGGAG+TGG + tig0026409:15440-15459 Msa1428740:CDS 50.0%
CTGCTGCTCACATCAACACT+TGG - tig0026409:15558-15577 None:intergenic 50.0%
TCACTTCTGATCGGTAGGAC+TGG - tig0026409:15590-15609 None:intergenic 50.0%
TTCAACCCGAACTTCAGTCG+AGG + tig0026409:15722-15741 Msa1428740:CDS 50.0%
CCACCTCACCACTTATATGC+TGG - tig0026409:15758-15777 None:intergenic 50.0%
CCAGCATATAAGTGGTGAGG+TGG + tig0026409:15755-15774 Msa1428740:CDS 50.0%
!! GGTGGGCTACAGTCATAAAC+TGG - tig0026409:15798-15817 None:intergenic 50.0%
TAAGCTGTTCTGCTGAGGGT+GGG - tig0026409:15815-15834 None:intergenic 50.0%
ATAAGCTGTTCTGCTGAGGG+TGG - tig0026409:15816-15835 None:intergenic 50.0%
CAAGCCCAATGACAAACTGG+AGG + tig0026409:15938-15957 Msa1428740:CDS 50.0%
ACAGAAAACTCAGCCCTTGC+AGG - tig0026409:16125-16144 None:intergenic 50.0%
! TGCAAGGGCTGAGTTTTCTG+TGG + tig0026409:16124-16143 Msa1428740:CDS 50.0%
GAATCAGAAGCCACGGAATC+TGG - tig0026409:16419-16438 None:intergenic 50.0%
TTGTCAAGTTCCAGGGAGCA+AGG + tig0026409:16575-16594 Msa1428740:CDS 50.0%
!! AATGGTGTTACCTTGCTCCC+TGG - tig0026409:16588-16607 None:intergenic 50.0%
CCACCTAGTGAGATAAGGCT+TGG - tig0026409:17193-17212 None:intergenic 50.0%
! CCAAGCCTTATCTCACTAGG+TGG + tig0026409:17190-17209 Msa1428740:intron 50.0%
! CAAGGGTTAGCAGTCTCAGT+AGG - tig0026409:17375-17394 None:intergenic 50.0%
GTAGAACCTTCACAGGATGC+TGG + tig0026409:17814-17833 Msa1428740:CDS 50.0%
GATGCTGGCACTTCCAATGA+TGG + tig0026409:17829-17848 Msa1428740:CDS 50.0%
! GGCACTTCCAATGATGGAGT+TGG + tig0026409:17835-17854 Msa1428740:CDS 50.0%
AGTGGGTGAACGGAATTCAG+GGG - tig0026409:17935-17954 None:intergenic 50.0%
CAGTGGGTGAACGGAATTCA+GGG - tig0026409:17936-17955 None:intergenic 50.0%
! ACCCACTGGTGAAGTGGATT+TGG + tig0026409:17948-17967 Msa1428740:CDS 50.0%
! AGGGATCTGGCTTCAATGAC+TGG - tig0026409:18432-18451 None:intergenic 50.0%
TCTGCTCGTTTCTTCAGCAC+CGG - tig0026409:18601-18620 None:intergenic 50.0%
GAAACGAGCAGAACTCCAGT+TGG + tig0026409:18609-18628 Msa1428740:CDS 50.0%
AGAATCGCTAGAGCTCGAAC+TGG - tig0026409:18709-18728 None:intergenic 50.0%
!! TTCTAGCCTCGGAAGTACCA+TGG + tig0026409:18829-18848 Msa1428740:three_prime_UTR 50.0%
!! TCTAGCCTCGGAAGTACCAT+GGG + tig0026409:18830-18849 Msa1428740:three_prime_UTR 50.0%
TACCATGGGGTCTTGGCTAA+TGG + tig0026409:18844-18863 Msa1428740:three_prime_UTR 50.0%
TACCATTAGCCAAGACCCCA+TGG - tig0026409:18849-18868 None:intergenic 50.0%
GGTCTTGGCTAATGGTAGTC+AGG + tig0026409:18852-18871 Msa1428740:three_prime_UTR 50.0%
TGGCTAATGGTAGTCAGGTC+AGG + tig0026409:18857-18876 Msa1428740:three_prime_UTR 50.0%
GTCTGCACTGCTCTTCTGCT+TGG + tig0026409:13788-13807 Msa1428740:CDS 55.0%
GGATTCAGGGTCTGATAGGG+CGG + tig0026409:14390-14409 Msa1428740:CDS 55.0%
TAGGGCGGAGAGTTCTTCAC+CGG + tig0026409:14405-14424 Msa1428740:CDS 55.0%
GGGTGGAGCTCATCAAGCAT+TGG - tig0026409:14454-14473 None:intergenic 55.0%
GGACAAATGAGCAGGCTGTG+GGG - tig0026409:14494-14513 None:intergenic 55.0%
GGGACAAATGAGCAGGCTGT+GGG - tig0026409:14495-14514 None:intergenic 55.0%
CCATCACGGGACAAATGAGC+AGG - tig0026409:14502-14521 None:intergenic 55.0%
CCTGCTCATTTGTCCCGTGA+TGG + tig0026409:14499-14518 Msa1428740:CDS 55.0%
GAGGAAGAAGCAATGGAGGG+TGG + tig0026409:14646-14665 Msa1428740:CDS 55.0%
GATGGAGCGGAACCAGGAAT+GGG - tig0026409:14931-14950 None:intergenic 55.0%
AGATGGAGCGGAACCAGGAA+TGG - tig0026409:14932-14951 None:intergenic 55.0%
GATGGCGTTTCTGTTGAGGC+TGG + tig0026409:15336-15355 Msa1428740:CDS 55.0%
! GTTGAGGCTGGTCATGGAAG+TGG + tig0026409:15348-15367 Msa1428740:CDS 55.0%
AGCCTCTTCCGAACTGCATG+CGG + tig0026409:15992-16011 Msa1428740:CDS 55.0%
TTCCGCATGCAGTTCGGAAG+AGG - tig0026409:15997-16016 None:intergenic 55.0%
! GAAGTGCCAGCATCCTGTGA+AGG - tig0026409:17823-17842 None:intergenic 55.0%
CCAGTGGGTGAACGGAATTC+AGG - tig0026409:17937-17956 None:intergenic 55.0%
CCTGAATTCCGTTCACCCAC+TGG + tig0026409:17934-17953 Msa1428740:CDS 55.0%
CCACTTCACCAGTGGGTGAA+CGG - tig0026409:17945-17964 None:intergenic 55.0%
GACATGTAGCCCTCTGCTGA+AGG - tig0026409:18039-18058 None:intergenic 55.0%
!! CTAGCCTCGGAAGTACCATG+GGG + tig0026409:18831-18850 Msa1428740:three_prime_UTR 55.0%
AAGACCCCATGGTACTTCCG+AGG - tig0026409:18838-18857 None:intergenic 55.0%
!! TCGGAAGTACCATGGGGTCT+TGG + tig0026409:18837-18856 Msa1428740:three_prime_UTR 55.0%
GAGAATGGGAAAGCTCGGGG+AGG + tig0026409:14274-14293 Msa1428740:CDS 60.0%
AATGGGAAAGCTCGGGGAGG+CGG + tig0026409:14277-14296 Msa1428740:CDS 60.0%
CGGGACAAATGAGCAGGCTG+TGG - tig0026409:14496-14515 None:intergenic 60.0%
AGCAATGGAGGGTGGCCAAG+AGG + tig0026409:14654-14673 Msa1428740:CDS 60.0%
TGAGGTGGAAGAGACCCCAC+TGG + tig0026409:15770-15789 Msa1428740:CDS 60.0%
CCGTTCACCCACTGGTGAAG+TGG + tig0026409:17942-17961 Msa1428740:CDS 60.0%
ATGGGAAAGCTCGGGGAGGC+GGG + tig0026409:14278-14297 Msa1428740:CDS 65.0%
GGAGCGGAACCAGGAATGGG+TGG - tig0026409:14928-14947 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0026409 gene 13009 19173 13009 ID=Msa1428740;Name=Msa1428740
tig0026409 mRNA 13009 19173 13009 ID=Msa1428740-mRNA-1;Parent=Msa1428740;Name=Msa1428740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=339|1|1|1|0.33|0.5|4|439|1341
tig0026409 exon 13009 13255 13009 ID=Msa1428740-mRNA-1:exon:6122;Parent=Msa1428740-mRNA-1
tig0026409 exon 13371 13426 13371 ID=Msa1428740-mRNA-1:exon:6123;Parent=Msa1428740-mRNA-1
tig0026409 exon 13572 16694 13572 ID=Msa1428740-mRNA-1:exon:6124;Parent=Msa1428740-mRNA-1
tig0026409 exon 17796 19173 17796 ID=Msa1428740-mRNA-1:exon:6125;Parent=Msa1428740-mRNA-1
tig0026409 five_prime_UTR 13009 13255 13009 ID=Msa1428740-mRNA-1:five_prime_utr;Parent=Msa1428740-mRNA-1
tig0026409 five_prime_UTR 13371 13426 13371 ID=Msa1428740-mRNA-1:five_prime_utr;Parent=Msa1428740-mRNA-1
tig0026409 five_prime_UTR 13572 13607 13572 ID=Msa1428740-mRNA-1:five_prime_utr;Parent=Msa1428740-mRNA-1
tig0026409 CDS 13608 16694 13608 ID=Msa1428740-mRNA-1:cds;Parent=Msa1428740-mRNA-1
tig0026409 CDS 17796 18734 17796 ID=Msa1428740-mRNA-1:cds;Parent=Msa1428740-mRNA-1
tig0026409 three_prime_UTR 18735 19173 18735 ID=Msa1428740-mRNA-1:three_prime_utr;Parent=Msa1428740-mRNA-1
Gene Sequence

>Msa1428740

ATGGGATCAGTGATTGAAATTGGAATCAAAGTTAGGAAATTTGTTTTCATTTCAATCAGAGGGGTTTACAGATCAGCTTGCCATCATCCATTTCTTTTGGGTTTTTTAGGATTTTTGCTGTTTTTGTACAGATATTTTCCTTTTTTGTTTTCTGTTTTGGTTTCTGCGTCTCCTGTTTTAGTCTGCACTGCTCTTCTGCTTGGGACCCTTCTCAGTTTTGGGCAGCCAAATGTGCCTGAGTTTGAAAAGGAAGAGAGAGTTACTCATGGTATTTCGTCGTTTCAAACTGGATTTTCGGAGGGTGAAACCATTGTTTCTGATAGAGATGAGAGCTATTTTGTGAGAGGATATTCAGAACATAGAAGTGATATTGAAGAGAGTGGCGTTGAAGAAGCGAGTTTGGTGGGTGTTAAAGATGATAGGAGTGAGGATGATCATGGTTTGCTTTATGACTCTGCGCTGGATGATGTTAACTTGCAGGATATTCAGCATGAGAACGAAGTAAAAGGGGATGTAGAAAGGGAATTACATAGTTTTGACTTAGGAAAGGGCAAGGAAGTTCATGACGGGAACCTCACATCCGAAGTTGTTTCAAGTGACGACGAAGCTATTGAGAAACAGTATGTCATGGTTCAAAAAGAAGATGATGATGATATTTTTGAAATTGAGAATGGGAAAGCTCGGGGAGGCGGGTTTGATTCATTTAAGGAAGGTGATGCAGATTGTTCACCCAGTTCATCTTGGAAACGGGTGGAGAACAACACTGATGAAGACGACTCTGAGGATTCAGGGTCTGATAGGGCGGAGAGTTCTTCACCGGATGCTTCCATGGCTGACATCATTCCAATGCTTGATGAGCTCCACCCACTTTTAGATGTAGATGCCCCACAGCCTGCTCATTTGTCCCGTGATGGTTCTGATGCTGCATCCGAGAAATCTCAGAAAAGCGACAACGACGATGACGATGATGACAACAGTGTCGAATCAGATGAAGATATTGAAAATCATGGTGAAGCGGAAGAAGATGGTGTTGATGAAGAGGAAGAAGCAATGGAGGGTGGCCAAGAGGATGAAAGTAAATCTGCTATCAAGTGGACAGAGGATGACCAAAAGAATCTTATGGATCTGGGAACTTTGGAGCTTGAAAGGAACCGACGATTGGAAAGTCTTATAGCTAGGAGAATGGCAAGGAGATTGATGACTGAAAAGAATCTAATAGACTTAGATAGTGCCGATGTTCCCTCTAATGTTGCGCCTATTTCTGTTAGACGAAACCCTTTTGATTTCCCTGATGAATCTTATGCTGGCATGGGATTACCACCCATTCCTGGTTCCGCTCCATCTATTCTACAGCCTAGACGAAACCCTTTTGACATTCCGTACGACCCAAATGAAGAGAAACCTGATCTTAAAAGGGACAGTTTTCAACAAGAGTTCACACAGTTTCAAAAAGATGCATTTTTTCGGAGGCATGAAAGTTTTAGCATGGGACCTTCAGTATTGGGGATATCTAAGCAAGAGAGGCATGATATTAATTGGAAGCCTGTGTTTGTATCTGAAAGGATGGTTTCGGAGGGAACAAGCTATTTCCAGAGGCAATCTAGTGAAGTAAGTGATTCAAAATTGAGTTCTGTTCCAGATACTGAGTCAGCAAGTTCAGGTGATCAGGATGAGAGGAAATTAAGTGAACGGGACTTGTCTCCAGAGACTGAATTAACATCTAATTTGGATGGCGTTTCTGTTGAGGCTGGTCATGGAAGTGGATCCTCTGAAGAAAATGAATCTGTGGAGATGATAGAAGGTGAGGAGAGCAATGTTTACCGTGATGAAGATGAAATAGTGCTCGGTGGAGTGGAAGATCCTTCTGAGATGGAATTTTATCCTGCAACAGGAGAGCTTGAAATCGACGAGCAATTCAATGATGGGGAAACAGATTTGACAAGAGAACCAAGTGTTGATGTGAGCAGCAGCAGATCAAGCCAGTCCTACCGATCAGAAGTGATTGACGACATACCTGATGAGGAATCAGAAAAAACTGCAAATTTGCAGCATGAAGATGGTCACTTCCCAGAATCGAGAACTTCAACCCAAACTTCAGTGGAGGAATCAATAATTTCAACCCGAACTTCAGTCGAGGAATCAAACTTCCAGCATATAAGTGGTGAGGTGGAAGAGACCCCACTGGTACCAGTTTATGACTGTAGCCCACCCTCAGCAGAACAGCTTATATCTTTTTCTTCCTTGTCTTCTGATTCAGCAACAGAGTTTTCTGAGACGGCATTGCCTACTGTCTCAGTCGATACTACTGCTGATGTGGCTGATAAAGAGTACAAGCCCAATGACAAACTGGAGGATAATTCTTCTAATCATGAGAAAATTCAAGCAGCCTCTTCCGAACTGCATGCGGAAGTCAAAAATGAAATGAGGTCCGAGGAATCTGAAGATATAGATCAGTACAATGTTACTGCAGAGGAGTTATCTGCAGTTATACCAAGTTTTGTTGATCAAAATAGACCTGCAAGGGCTGAGTTTTCTGTGGATTCCAACTTTTCTCTGGATATTGGATCAGAAAAGGGTGTAACTGATTCAGGTTTGTTTCATGAACAGGATATAGACAACCACATATCTGCTGATTCTGAAATGCTTCATCAAGACAATGTGGAGTCTCCAGATTCAAACTATCATCTGGCTTCTGATAAGTTACATATGTTGGATAATGAGTCTGTGGAGGAAGATGCACTGCCCAATGAAGTATCTAAACTAGATAATGAAAATATATCTGTTTCAGTACAAGATGAAGATGAAATGCCAGATTCCGTGGCTTCTGATTCTCATCACATACCTTCTAATAGTTCATCTATGCATGCATTAGGGGATTCACAGTTCTTACCAGTAGAAACAGAACATTTAGAGAAAAATTGGTCAAATGAAGAACGCATATTTCCGATCGAACAGGATAAAGTCTTGTTGTCAAGTTCCAGGGAGCAAGGTAACACCATTATCCACCAAGATCTGGATAAGAATCATCTGTCAAGCTCTGATAAATTGGTAGATGCACAATCTTCCAGTGATCACGATGAAAGTCAGAATTCTGATAACATTCTGGTAGAACCTTCACAGGATGCTGGCACTTCCAATGATGGAGTTGGAGAATTGCATGAACATGACTCCTTATATGAAACTCCCGTTATGATCTCTTCTGTGACTTCTGAAAATTCTGACACCCCTGAATTCCGTTCACCCACTGGTGAAGTGGATTTGGAAGTTTATAAGCATCATGGGGAACTTGCTAATGAAGACCAAAATGAAGCACAACAAAACTTAGTTCCTTCAGCAGAGGGCTACATGTCTCCGAATAATGAAGAAAATTTCAATGAATTTGATTATATGAAGGATATTGACGAGGAATTCTTGTCAGAATTGGACACAGTTGGGGATTTTAGTGTCGGTGATGCTGGTGTATCGCATCGTACTGACGTTGTCCATGAAGAAACTAGAGATGCTCAACTTAGTTCACTGCCTGAGGATGTAAAAACAGCAGAGGTTGAGCAGGACAATGACATACCAGTTCTTGAAGTAAGATCACTTGAAGATATTGACATAGCTTTTAAGCAACTTCAAGAAGGAGTTGATGTTAATGATGTCATCCTTCCGAGTACAATTAAGGATCAGCTTGTTAGTGATGAATCTAGAGATCACGTGGAAGTTAATTCAGACCTTCCAGTCATTGAAGCCAGATCCCTAGAAGATATTGATGTTGCTTTAGAGAAAATATCTGAAGATAATCAAGGTGAGCTGCCAGAAGAAAGAGATGCAGAAGATGCTTCAGTCAAACTGGAAGCAAATGAAGATGGCTCAGCAAAGTTGAATGAATCATTTGATGTATCAACCGGTGCTGAAGAAACGAGCAGAACTCCAGTTGGTAAATTGGAAAATGTATCCATTAGCGGCTCTAGTAATAAGGAAAAATCTCACAGTAGGAAATCTAGTTCTAGTTCCAGTTCGAGCTCTAGCGATTCTGATTGA
Protein sequence

>Msa1428740

MGSVIEIGIKVRKFVFISIRGVYRSACHHPFLLGFLGFLLFLYRYFPFLFSVLVSASPVLVCTALLLGTLLSFGQPNVPEFEKEERVTHGISSFQTGFSEGETIVSDRDESYFVRGYSEHRSDIEESGVEEASLVGVKDDRSEDDHGLLYDSALDDVNLQDIQHENEVKGDVERELHSFDLGKGKEVHDGNLTSEVVSSDDEAIEKQYVMVQKEDDDDIFEIENGKARGGGFDSFKEGDADCSPSSSWKRVENNTDEDDSEDSGSDRAESSSPDASMADIIPMLDELHPLLDVDAPQPAHLSRDGSDAASEKSQKSDNDDDDDDNSVESDEDIENHGEAEEDGVDEEEEAMEGGQEDESKSAIKWTEDDQKNLMDLGTLELERNRRLESLIARRMARRLMTEKNLIDLDSADVPSNVAPISVRRNPFDFPDESYAGMGLPPIPGSAPSILQPRRNPFDIPYDPNEEKPDLKRDSFQQEFTQFQKDAFFRRHESFSMGPSVLGISKQERHDINWKPVFVSERMVSEGTSYFQRQSSEVSDSKLSSVPDTESASSGDQDERKLSERDLSPETELTSNLDGVSVEAGHGSGSSEENESVEMIEGEESNVYRDEDEIVLGGVEDPSEMEFYPATGELEIDEQFNDGETDLTREPSVDVSSSRSSQSYRSEVIDDIPDEESEKTANLQHEDGHFPESRTSTQTSVEESIISTRTSVEESNFQHISGEVEETPLVPVYDCSPPSAEQLISFSSLSSDSATEFSETALPTVSVDTTADVADKEYKPNDKLEDNSSNHEKIQAASSELHAEVKNEMRSEESEDIDQYNVTAEELSAVIPSFVDQNRPARAEFSVDSNFSLDIGSEKGVTDSGLFHEQDIDNHISADSEMLHQDNVESPDSNYHLASDKLHMLDNESVEEDALPNEVSKLDNENISVSVQDEDEMPDSVASDSHHIPSNSSSMHALGDSQFLPVETEHLEKNWSNEERIFPIEQDKVLLSSSREQGNTIIHQDLDKNHLSSSDKLVDAQSSSDHDESQNSDNILVEPSQDAGTSNDGVGELHEHDSLYETPVMISSVTSENSDTPEFRSPTGEVDLEVYKHHGELANEDQNEAQQNLVPSAEGYMSPNNEENFNEFDYMKDIDEEFLSELDTVGDFSVGDAGVSHRTDVVHEETRDAQLSSLPEDVKTAEVEQDNDIPVLEVRSLEDIDIAFKQLQEGVDVNDVILPSTIKDQLVSDESRDHVEVNSDLPVIEARSLEDIDVALEKISEDNQGELPEERDAEDASVKLEANEDGSAKLNESFDVSTGAEETSRTPVGKLENVSISGSSNKEKSHSRKSSSSSSSSSSDSD*