Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188320 | XP_003592957.2 | 96.463 | 311 | 8 | 1 | 1 | 308 | 1 | 311 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188320 | sp|Q5BPL5|EI24_ARATH | 62.379 | 311 | 108 | 3 | 1 | 308 | 1 | 305 | 3.01e-132 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188320 | G7INN0 | 96.463 | 311 | 8 | 1 | 1 | 308 | 1 | 311 | 0.0 | 607 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0188320 | Msa0506860 | 0.806910 | 6.539897e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188320 | MtrunA17_Chr2g0277351 | 96.463 | 311 | 8 | 1 | 1 | 308 | 1 | 311 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188320 | AT4G06676.2 | 62.379 | 311 | 108 | 3 | 1 | 308 | 1 | 305 | 2.05e-133 | 381 |
| Msa0188320 | AT4G06676.1 | 62.379 | 311 | 108 | 3 | 1 | 308 | 1 | 305 | 3.06e-133 | 381 |
Find 76 sgRNAs with CRISPR-Local
Find 620 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTCCTCTTGTGAGTTAT+GGG | 0.222121 | 2_1:+3501272 | Msa0188320:CDS |
| TTCTCTCCTCTTGTGAGTTA+TGG | 0.223399 | 2_1:+3501271 | Msa0188320:CDS |
| CAGTTTGTTCTAACTGCAAC+TGG | 0.237576 | 2_1:+3501656 | Msa0188320:intron |
| TACAATGACATTGCCAAGTA+TGG | 0.237590 | 2_1:+3500048 | Msa0188320:CDS |
| ACTATGCTAAACACATATAA+TGG | 0.247054 | 2_1:-3498901 | None:intergenic |
| TCTTGTGAGTTATGGGATTA+TGG | 0.262600 | 2_1:+3501279 | Msa0188320:CDS |
| TTGTCTTCCTGCAGGCTCTT+TGG | 0.304054 | 2_1:+3498872 | Msa0188320:intron |
| TGGACTACTTTGAATCTTAC+TGG | 0.317091 | 2_1:+3500706 | Msa0188320:CDS |
| TACAGGAAGTCCTTGCGTTT+TGG | 0.331181 | 2_1:+3501237 | Msa0188320:intron |
| TTATCTGCAACATAAAATAT+TGG | 0.364672 | 2_1:-3501746 | None:intergenic |
| GCATAGTTACTGTGTTGTTT+TGG | 0.367503 | 2_1:-3500119 | None:intergenic |
| CAGGGATGACAACCGAGTTT+AGG | 0.373904 | 2_1:-3495429 | None:intergenic |
| TGAAGTCCGGTGGTATTCTA+TGG | 0.382713 | 2_1:+3495033 | Msa0188320:CDS |
| GTGGATATTACCTGATCAAC+TGG | 0.389173 | 2_1:+3495459 | Msa0188320:CDS |
| AGCGTTGATGCGATGCGATC+AGG | 0.391083 | 2_1:+3494999 | Msa0188320:exon |
| TTGAGCACCTTTCCTATGTA+TGG | 0.392195 | 2_1:-3500520 | None:intergenic |
| TATTTGCAGGTTTATGCAAC+TGG | 0.395959 | 2_1:+3500490 | Msa0188320:intron |
| TCTCATAAACTGTGTGCCTT+AGG | 0.396410 | 2_1:+3495484 | Msa0188320:CDS |
| GTACAGAAACATTGATTCTC+AGG | 0.412055 | 2_1:+3494955 | Msa0188320:five_prime_UTR |
| TCAATTTCTTACTTCTTTCG+TGG | 0.422816 | 2_1:+3500539 | Msa0188320:CDS |
| TTATGAGAACCCAGTTGATC+AGG | 0.428042 | 2_1:-3495469 | None:intergenic |
| AGTTCGGAGCAAAAGAGGTT+TGG | 0.432296 | 2_1:-3495114 | None:intergenic |
| GTTGTGTAGAACTAGTTTAT+CGG | 0.435485 | 2_1:+3494906 | Msa0188320:five_prime_UTR |
| CATTGCGGCATACCCATACT+TGG | 0.436101 | 2_1:-3500061 | None:intergenic |
| GCTTAACCCAGGGTCATGAT+TGG | 0.437236 | 2_1:+3500288 | Msa0188320:intron |
| GGACAGTGTTTCCTCCTCAA+TGG | 0.437491 | 2_1:+3495137 | Msa0188320:CDS |
| CTATGCTAAACACATATAAT+GGG | 0.439884 | 2_1:-3498900 | None:intergenic |
| CGGTTGTCATCCCTGCTTTG+TGG | 0.440189 | 2_1:+3495437 | Msa0188320:CDS |
| GGTAATATCCACCACAAAGC+AGG | 0.447433 | 2_1:-3495448 | None:intergenic |
| CCCAGGGTCATGATTGGAAT+AGG | 0.463682 | 2_1:+3500294 | Msa0188320:intron |
| GTGTTGTTATTCTCTGTCTC+AGG | 0.469803 | 2_1:+3495090 | Msa0188320:CDS |
| AAAAGACCATCTGGCCTTGG+AGG | 0.482213 | 2_1:+3500159 | Msa0188320:CDS |
| CAAGAAAGAAAACACTCAAA+AGG | 0.494816 | 2_1:-3500338 | None:intergenic |
| CAAGTATGGGTATGCCGCAA+TGG | 0.495138 | 2_1:+3500062 | Msa0188320:CDS |
| TGATGCGATGCGATCAGGAA+TGG | 0.503353 | 2_1:+3495004 | Msa0188320:exon |
| TTTACTGTGGATAGCAGCTC+CGG | 0.517229 | 2_1:+3500096 | Msa0188320:CDS |
| GCATAGTTCTAAGCACCCTC+TGG | 0.519745 | 2_1:+3498917 | Msa0188320:CDS |
| AAGTATGGGTATGCCGCAAT+GGG | 0.520028 | 2_1:+3500063 | Msa0188320:CDS |
| TGTCCAGTTCGGAGCAAAAG+AGG | 0.527477 | 2_1:-3495119 | None:intergenic |
| GGAGGAAACACTGTCCAGTT+CGG | 0.528459 | 2_1:-3495130 | None:intergenic |
| TGTAGAACTAGTTTATCGGT+TGG | 0.530109 | 2_1:+3494910 | Msa0188320:five_prime_UTR |
| AGTGGCTCTTGACAGAAGGC+TGG | 0.541829 | 2_1:+3500686 | Msa0188320:CDS |
| GGTGGTATTCTATGGTTGGA+AGG | 0.543813 | 2_1:+3495041 | Msa0188320:CDS |
| CATAAACTGTGTGCCTTAGG+TGG | 0.544823 | 2_1:+3495487 | Msa0188320:CDS |
| CATGATTGGAATAGGAGAGC+AGG | 0.550285 | 2_1:+3500302 | Msa0188320:CDS |
| GTCCGGTGGTATTCTATGGT+TGG | 0.550929 | 2_1:+3495037 | Msa0188320:CDS |
| GGAATGGAAAGGTTGAAGTC+CGG | 0.561024 | 2_1:+3495020 | Msa0188320:CDS |
| CAGTATATTCCTCCTAAACT+CGG | 0.561685 | 2_1:+3495417 | Msa0188320:intron |
| AAATTTCAAAGTTCCACCTA+AGG | 0.573726 | 2_1:-3495500 | None:intergenic |
| CCTAACCCTCCAAGGCCAGA+TGG | 0.576170 | 2_1:-3500165 | None:intergenic |
| ACGAAGTGGCTCTTGACAGA+AGG | 0.577785 | 2_1:+3500682 | Msa0188320:CDS |
| TAAATGGAGAGCTGCAGGAG+TGG | 0.581355 | 2_1:+3501715 | Msa0188320:CDS |
| GGATGACAACCGAGTTTAGG+AGG | 0.581383 | 2_1:-3495426 | None:intergenic |
| ACAATGACATTGCCAAGTAT+GGG | 0.582382 | 2_1:+3500049 | Msa0188320:CDS |
| TAAATGGAATTTCAACGAAG+TGG | 0.584963 | 2_1:+3500668 | Msa0188320:CDS |
| TGTTCTAACTGCAACTGGGT+CGG | 0.587604 | 2_1:+3501661 | Msa0188320:CDS |
| TTGTCATCCCTGCTTTGTGG+TGG | 0.592504 | 2_1:+3495440 | Msa0188320:CDS |
| AGTTTGTTCTAACTGCAACT+GGG | 0.594800 | 2_1:+3501657 | Msa0188320:intron |
| CTAAGAAAATGAAACCATTG+AGG | 0.602046 | 2_1:-3495151 | None:intergenic |
| TTCCAACCATAGAATACCAC+CGG | 0.602334 | 2_1:-3495039 | None:intergenic |
| GTAATATCCACCACAAAGCA+GGG | 0.603027 | 2_1:-3495447 | None:intergenic |
| AGTTAGAACCTAACCCTCCA+AGG | 0.604053 | 2_1:-3500173 | None:intergenic |
| GGAGAGCTGCAGGAGTGGAA+AGG | 0.606045 | 2_1:+3501720 | Msa0188320:CDS |
| ACTGGTTTCATACCATACAT+AGG | 0.607086 | 2_1:+3500508 | Msa0188320:CDS |
| AAAGACCATCTGGCCTTGGA+GGG | 0.614769 | 2_1:+3500160 | Msa0188320:CDS |
| CTGTCTAGAGTATAGAGTGA+AGG | 0.618027 | 2_1:-3501796 | None:intergenic |
| CGATGCGATCAGGAATGGAA+AGG | 0.629047 | 2_1:+3495009 | Msa0188320:exon |
| AAGAATATAGCCAAAACGCA+AGG | 0.630017 | 2_1:-3501247 | None:intergenic |
| TCTAACTGCAACTGGGTCGG+AGG | 0.632359 | 2_1:+3501664 | Msa0188320:CDS |
| AGAAAATGAAACCATTGAGG+AGG | 0.635391 | 2_1:-3495148 | None:intergenic |
| TTTCATACCATACATAGGAA+AGG | 0.636242 | 2_1:+3500513 | Msa0188320:CDS |
| ATAATCCCATAACTCACAAG+AGG | 0.642377 | 2_1:-3501277 | None:intergenic |
| AAACTTAGATCTTCCCATTG+CGG | 0.646070 | 2_1:-3500076 | None:intergenic |
| ATGGAAAGGTTGAAGTCCGG+TGG | 0.664819 | 2_1:+3495023 | Msa0188320:CDS |
| GGGAAGATCTAAGTTTACTG+TGG | 0.668273 | 2_1:+3500083 | Msa0188320:CDS |
| TGGATATTACCTGATCAACT+GGG | 0.675011 | 2_1:+3495460 | Msa0188320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGTTATTTTAAAGAAAA+AGG | - | chr2_1:3500764-3500783 | None:intergenic | 10.0% |
| !! | TATTAAATTATTAACCTTAT+AGG | + | chr2_1:3501439-3501458 | Msa0188320:intron | 10.0% |
| !! | ATTAAATTATTAACCTTATA+GGG | + | chr2_1:3501440-3501459 | Msa0188320:intron | 10.0% |
| !!! | TACTTTATTAATGTTTTCTA+CGG | - | chr2_1:3494938-3494957 | None:intergenic | 15.0% |
| !!! | GTTTCTTTTACTATAAATAT+AGG | + | chr2_1:3495911-3495930 | Msa0188320:intron | 15.0% |
| !!! | GTTTCTTTTACTATAAATAT+AGG | + | chr2_1:3495911-3495930 | Msa0188320:intron | 15.0% |
| !! | AAGAAGTTATTGAATAAATA+GGG | - | chr2_1:3499278-3499297 | None:intergenic | 15.0% |
| !! | TAAGAAGTTATTGAATAAAT+AGG | - | chr2_1:3499279-3499298 | None:intergenic | 15.0% |
| !!! | CTTTTTGTTATCTAAAATAT+TGG | + | chr2_1:3499672-3499691 | Msa0188320:intron | 15.0% |
| !! | AAAATATTGGATTGTAATAA+AGG | + | chr2_1:3499685-3499704 | Msa0188320:intron | 15.0% |
| !! | ATAAATATACTATCTGATAA+AGG | - | chr2_1:3499995-3500014 | None:intergenic | 15.0% |
| !!! | TTAAAGTATACTTTTTGATT+AGG | + | chr2_1:3500643-3500662 | Msa0188320:intron | 15.0% |
| !!! | ATTTTTTTAGTGAAATAAAC+CGG | - | chr2_1:3500812-3500831 | None:intergenic | 15.0% |
| !!! | TATCCTTTGAAAAAAATAAA+TGG | + | chr2_1:3501699-3501718 | Msa0188320:CDS | 15.0% |
| !! | AACAAGTATTCAGTAATAAT+TGG | + | chr2_1:3495272-3495291 | Msa0188320:intron | 20.0% |
| !!! | ATTTTTCAGAAACGTATTTT+TGG | + | chr2_1:3495862-3495881 | Msa0188320:intron | 20.0% |
| !!! | TTTTTCAGAAACGTATTTTT+GGG | + | chr2_1:3495863-3495882 | Msa0188320:intron | 20.0% |
| !!! | CAGATTTGTTACAATTTTAT+GGG | + | chr2_1:3495887-3495906 | Msa0188320:intron | 20.0% |
| !!! | ATTTTTCAGAAACGTATTTT+TGG | + | chr2_1:3495862-3495881 | Msa0188320:intron | 20.0% |
| !!! | TTTTTCAGAAACGTATTTTT+GGG | + | chr2_1:3495863-3495882 | Msa0188320:intron | 20.0% |
| !!! | CAGATTTGTTACAATTTTAT+GGG | + | chr2_1:3495887-3495906 | Msa0188320:intron | 20.0% |
| !! | TTGAAACTTAAACTTCTATT+AGG | - | chr2_1:3498701-3498720 | None:intergenic | 20.0% |
| !! | ATGAAAGAAATAACTTAACA+GGG | - | chr2_1:3499021-3499040 | None:intergenic | 20.0% |
| !! | TATGAAAGAAATAACTTAAC+AGG | - | chr2_1:3499022-3499041 | None:intergenic | 20.0% |
| !!! | ACTTTTATTCATGATTCAAT+AGG | + | chr2_1:3499117-3499136 | Msa0188320:intron | 20.0% |
| !!! | TTTTATTTGGAACTGAATAT+TGG | - | chr2_1:3499230-3499249 | None:intergenic | 20.0% |
| !! | AAATCAAATGAAAAATCAGT+AGG | - | chr2_1:3499255-3499274 | None:intergenic | 20.0% |
| !! | TTGTAATACTTCATTAGATA+TGG | - | chr2_1:3499624-3499643 | None:intergenic | 20.0% |
| !!! | TCTAATGAAGTATTACAAAA+TGG | + | chr2_1:3499626-3499645 | Msa0188320:intron | 20.0% |
| !! | TAGAAAATGAATCTGTTATA+AGG | + | chr2_1:3499809-3499828 | Msa0188320:intron | 20.0% |
| !! | CATAATATCTTTATCAATCT+GGG | - | chr2_1:3500392-3500411 | None:intergenic | 20.0% |
| !! | ACATAATATCTTTATCAATC+TGG | - | chr2_1:3500393-3500412 | None:intergenic | 20.0% |
| !! | AATCAAGTTTACTGAATATA+AGG | - | chr2_1:3500419-3500438 | None:intergenic | 20.0% |
| !!! | ATATTCAGTAAACTTGATTT+TGG | + | chr2_1:3500420-3500439 | Msa0188320:intron | 20.0% |
| !! | ATGACTTTAAACAACTATAA+AGG | - | chr2_1:3500456-3500475 | None:intergenic | 20.0% |
| !!! | ACTTTTTGATTAGGTATAAA+TGG | + | chr2_1:3500652-3500671 | Msa0188320:intron | 20.0% |
| !! | AGGAAAAAACACTAAATTAT+AGG | - | chr2_1:3501082-3501101 | None:intergenic | 20.0% |
| !!! | ATAATTTAGTGTTTTTTCCT+TGG | + | chr2_1:3501082-3501101 | Msa0188320:intron | 20.0% |
| !! | AATATTCTTCAACAAGAAAA+TGG | - | chr2_1:3501141-3501160 | None:intergenic | 20.0% |
| !! | TGTTGAAGAATATTGAAATA+TGG | + | chr2_1:3501147-3501166 | Msa0188320:intron | 20.0% |
| !!! | TTTTTTTATTAGCTATCCTA+TGG | + | chr2_1:3501176-3501195 | Msa0188320:intron | 20.0% |
| !! | TATAAAGTCAAATTCAATGT+GGG | - | chr2_1:3501537-3501556 | None:intergenic | 20.0% |
| !! | ATATAAAGTCAAATTCAATG+TGG | - | chr2_1:3501538-3501557 | None:intergenic | 20.0% |
| !!! | TCTCCATTTATTTTTTTCAA+AGG | - | chr2_1:3501705-3501724 | None:intergenic | 20.0% |
| !! | TTATCTGCAACATAAAATAT+TGG | - | chr2_1:3501749-3501768 | None:intergenic | 20.0% |
| ! | ACTACTACTACTTATTTCAT+TGG | + | chr2_1:3495190-3495209 | Msa0188320:intron | 25.0% |
| ! | CTACTACTACTTATTTCATT+GGG | + | chr2_1:3495191-3495210 | Msa0188320:intron | 25.0% |
| ! | ATACTTGTTTGATTAAGCTT+TGG | - | chr2_1:3495261-3495280 | None:intergenic | 25.0% |
| !! | AAGCAACAAAAGGATTTTTA+AGG | - | chr2_1:3495606-3495625 | None:intergenic | 25.0% |
| ! | CCATAAAATTGTAACAAATC+TGG | - | chr2_1:3495889-3495908 | None:intergenic | 25.0% |
| !!! | CCAGATTTGTTACAATTTTA+TGG | + | chr2_1:3495886-3495905 | Msa0188320:intron | 25.0% |
| ! | GTTACAAAAGAGATTTCAAT+GGG | - | chr2_1:3496143-3496162 | None:intergenic | 25.0% |
| ! | ATTGCAATTCACTTTGATAT+TGG | + | chr2_1:3496296-3496315 | Msa0188320:intron | 25.0% |
| ! | AAAGGATAATCAAGTATCAT+GGG | + | chr2_1:3496415-3496434 | Msa0188320:intron | 25.0% |
| ! | TTTGTATATGACAAAGTCTT+TGG | + | chr2_1:3496699-3496718 | Msa0188320:intron | 25.0% |
| ! | TTAAACGATTCAAAAGATCT+AGG | - | chr2_1:3496889-3496908 | None:intergenic | 25.0% |
| ! | CCATAAAATTGTAACAAATC+TGG | - | chr2_1:3495889-3495908 | None:intergenic | 25.0% |
| !!! | CCAGATTTGTTACAATTTTA+TGG | + | chr2_1:3495886-3495905 | Msa0188320:intron | 25.0% |
| ! | GTTACAAAAGAGATTTCAAT+GGG | - | chr2_1:3496143-3496162 | None:intergenic | 25.0% |
| ! | ATTGCAATTCACTTTGATAT+TGG | + | chr2_1:3496296-3496315 | Msa0188320:intron | 25.0% |
| !! | TGCTTTTCTAAATCAATGTA+TGG | - | chr2_1:3498671-3498690 | None:intergenic | 25.0% |
| !!! | TACATTGATTTAGAAAAGCA+TGG | + | chr2_1:3498671-3498690 | Msa0188320:intron | 25.0% |
| ! | CTATGCTAAACACATATAAT+GGG | - | chr2_1:3498903-3498922 | None:intergenic | 25.0% |
| ! | ACTATGCTAAACACATATAA+TGG | - | chr2_1:3498904-3498923 | None:intergenic | 25.0% |
| ! | AAAAAGTGAAAATTACCAGA+GGG | - | chr2_1:3498935-3498954 | None:intergenic | 25.0% |
| ! | TAAAAAGTGAAAATTACCAG+AGG | - | chr2_1:3498936-3498955 | None:intergenic | 25.0% |
| ! | CCAACATGATAAAAAAGATT+AGG | - | chr2_1:3498968-3498987 | None:intergenic | 25.0% |
| !!! | CCTAATCTTTTTTATCATGT+TGG | + | chr2_1:3498965-3498984 | Msa0188320:intron | 25.0% |
| !!! | CTATTATTTTACCTGCTTTA+CGG | - | chr2_1:3499079-3499098 | None:intergenic | 25.0% |
| ! | TCATGATTCAATAGGAATAT+AGG | + | chr2_1:3499125-3499144 | Msa0188320:intron | 25.0% |
| !! | AAATCAGTAGGCATTTTATT+TGG | - | chr2_1:3499243-3499262 | None:intergenic | 25.0% |
| ! | CATCTGACTATTATGTTATT+AGG | - | chr2_1:3499315-3499334 | None:intergenic | 25.0% |
| !! | ATGCTGAATTGAAATTCTTT+TGG | + | chr2_1:3499458-3499477 | Msa0188320:intron | 25.0% |
| !! | GAAGTATTACAAAATGGTTA+TGG | + | chr2_1:3499632-3499651 | Msa0188320:intron | 25.0% |
| ! | AAAATGAATCTGTTATAAGG+AGG | + | chr2_1:3499812-3499831 | Msa0188320:intron | 25.0% |
| ! | AAATGAATCTGTTATAAGGA+GGG | + | chr2_1:3499813-3499832 | Msa0188320:intron | 25.0% |
| ! | TATTCCTACAATAAGTGATA+AGG | + | chr2_1:3500012-3500031 | Msa0188320:intron | 25.0% |
| ! | ATTCCTACAATAAGTGATAA+GGG | + | chr2_1:3500013-3500032 | Msa0188320:intron | 25.0% |
| !!! | CTTTAAAACTTGAATCCAAT+TGG | - | chr2_1:3500629-3500648 | None:intergenic | 25.0% |
| !! | AGTAATTTTCTTAAGAATGC+CGG | + | chr2_1:3500790-3500809 | Msa0188320:intron | 25.0% |
| !!! | ATAAGTTGTTTTTATCTGAG+AGG | - | chr2_1:3500870-3500889 | None:intergenic | 25.0% |
| !!! | CAACTTATTTTACAAACCTT+TGG | + | chr2_1:3500882-3500901 | Msa0188320:intron | 25.0% |
| ! | TCAGAAAATATGTTAAGAAC+TGG | - | chr2_1:3500958-3500977 | None:intergenic | 25.0% |
| ! | GTATTGTGAATCTTTAACAT+TGG | + | chr2_1:3501494-3501513 | Msa0188320:intron | 25.0% |
| ! | GTTGTGTAGAACTAGTTTAT+CGG | + | chr2_1:3494906-3494925 | Msa0188320:five_prime_UTR | 30.0% |
| CTAAGAAAATGAAACCATTG+AGG | - | chr2_1:3495154-3495173 | None:intergenic | 30.0% | |
| ! | CTCAATGGTTTCATTTTCTT+AGG | + | chr2_1:3495152-3495171 | Msa0188320:CDS | 30.0% |
| ! | ATGGTTTCATTTTCTTAGGA+AGG | + | chr2_1:3495156-3495175 | Msa0188320:CDS | 30.0% |
| CTGAATTAACTGTAATGTGT+TGG | - | chr2_1:3495236-3495255 | None:intergenic | 30.0% | |
| GGAAAATAAGGGTTAAATGA+TGG | - | chr2_1:3495337-3495356 | None:intergenic | 30.0% | |
| GAATATACTGCACAAAATGT+TGG | - | chr2_1:3495407-3495426 | None:intergenic | 30.0% | |
| AAATTTCAAAGTTCCACCTA+AGG | - | chr2_1:3495503-3495522 | None:intergenic | 30.0% | |
| GAAGAATAACAAGCAACAAA+AGG | - | chr2_1:3495616-3495635 | None:intergenic | 30.0% | |
| TTGTGAAAGTGACTCAAAAT+TGG | + | chr2_1:3495685-3495704 | Msa0188320:intron | 30.0% | |
| ! | CTTTCAGCAAACATCAATTT+TGG | - | chr2_1:3495721-3495740 | None:intergenic | 30.0% |
| ! | TGTTTGCTGAAAGTACAAAT+CGG | + | chr2_1:3495728-3495747 | Msa0188320:intron | 30.0% |
| TCTCAAAATAGTCTGATACA+AGG | - | chr2_1:3495937-3495956 | None:intergenic | 30.0% | |
| !! | AGACTATTTTGAGAGATAGA+GGG | + | chr2_1:3495943-3495962 | Msa0188320:intron | 30.0% |
| AAGGGTTTAGAAATCAAACT+AGG | + | chr2_1:3495975-3495994 | Msa0188320:intron | 30.0% | |
| AGGGTTTAGAAATCAAACTA+GGG | + | chr2_1:3495976-3495995 | Msa0188320:intron | 30.0% | |
| TTTGTATAGAGTTTGTCTCT+TGG | + | chr2_1:3495999-3496018 | Msa0188320:intron | 30.0% | |
| CGTTACAAAAGAGATTTCAA+TGG | - | chr2_1:3496144-3496163 | None:intergenic | 30.0% | |
| TAACGTTACTCATCATATAG+TGG | + | chr2_1:3496159-3496178 | Msa0188320:intron | 30.0% | |
| ! | TTACTCATCATATAGTGGAA+CGG | + | chr2_1:3496164-3496183 | Msa0188320:intron | 30.0% |
| CAAAGGATAATCAAGTATCA+TGG | + | chr2_1:3496414-3496433 | Msa0188320:intron | 30.0% | |
| TTTAAAGATACCATGCTCTA+TGG | + | chr2_1:3496904-3496923 | Msa0188320:intron | 30.0% | |
| ! | ATGCTTTAAGTGTAACAAGA+TGG | + | chr2_1:3497098-3497117 | Msa0188320:intron | 30.0% |
| ! | TGCTTTAAGTGTAACAAGAT+GGG | + | chr2_1:3497099-3497118 | Msa0188320:intron | 30.0% |
| TAAGAATACTCATGATCTAC+CGG | + | chr2_1:3497321-3497340 | Msa0188320:intron | 30.0% | |
| ! | CAAACTACTCAAGGAATTTT+AGG | - | chr2_1:3497733-3497752 | None:intergenic | 30.0% |
| CTAAAATTCCTTGAGTAGTT+TGG | + | chr2_1:3497731-3497750 | Msa0188320:intron | 30.0% | |
| ACCTTAATCTCTTCAATCAT+CGG | - | chr2_1:3497789-3497808 | None:intergenic | 30.0% | |
| TTGTGAAAGTGACTCAAAAT+TGG | + | chr2_1:3495685-3495704 | Msa0188320:intron | 30.0% | |
| ! | CTTTCAGCAAACATCAATTT+TGG | - | chr2_1:3495721-3495740 | None:intergenic | 30.0% |
| ! | TGTTTGCTGAAAGTACAAAT+CGG | + | chr2_1:3495728-3495747 | Msa0188320:intron | 30.0% |
| TCTCAAAATAGTCTGATACA+AGG | - | chr2_1:3495937-3495956 | None:intergenic | 30.0% | |
| !! | AGACTATTTTGAGAGATAGA+GGG | + | chr2_1:3495943-3495962 | Msa0188320:intron | 30.0% |
| AAGGGTTTAGAAATCAAACT+AGG | + | chr2_1:3495975-3495994 | Msa0188320:intron | 30.0% | |
| AGGGTTTAGAAATCAAACTA+GGG | + | chr2_1:3495976-3495995 | Msa0188320:intron | 30.0% | |
| TTTGTATAGAGTTTGTCTCT+TGG | + | chr2_1:3495999-3496018 | Msa0188320:intron | 30.0% | |
| CGTTACAAAAGAGATTTCAA+TGG | - | chr2_1:3496144-3496163 | None:intergenic | 30.0% | |
| TAACGTTACTCATCATATAG+TGG | + | chr2_1:3496159-3496178 | Msa0188320:intron | 30.0% | |
| ! | TTACTCATCATATAGTGGAA+CGG | + | chr2_1:3496164-3496183 | Msa0188320:intron | 30.0% |
| TAGCATGTAGAGCAATTTAT+TGG | - | chr2_1:3498621-3498640 | None:intergenic | 30.0% | |
| ! | GAAGTTTAAGTTTCAAAAGC+CGG | + | chr2_1:3498705-3498724 | Msa0188320:intron | 30.0% |
| TAGTTGCATAATTGTATTCG+AGG | + | chr2_1:3498740-3498759 | Msa0188320:intron | 30.0% | |
| TCTAGATATAGAATGACATC+TGG | - | chr2_1:3498797-3498816 | None:intergenic | 30.0% | |
| ! | GTTTTCAAACTAATGTTTCC+TGG | + | chr2_1:3498849-3498868 | Msa0188320:intron | 30.0% |
| AAATAACTTAACAGGGAGAA+TGG | - | chr2_1:3499014-3499033 | None:intergenic | 30.0% | |
| AGGAATATAGGATTACACAA+TGG | + | chr2_1:3499137-3499156 | Msa0188320:intron | 30.0% | |
| GGAATATAGGATTACACAAT+GGG | + | chr2_1:3499138-3499157 | Msa0188320:intron | 30.0% | |
| !! | TTGGAACTGAATATTGGTTT+GGG | - | chr2_1:3499224-3499243 | None:intergenic | 30.0% |
| ! | TTTGGAACTGAATATTGGTT+TGG | - | chr2_1:3499225-3499244 | None:intergenic | 30.0% |
| ACTATTATGTTATTAGGCAG+CGG | - | chr2_1:3499309-3499328 | None:intergenic | 30.0% | |
| AAGTAGATTCATGATATAGC+TGG | + | chr2_1:3499360-3499379 | Msa0188320:intron | 30.0% | |
| AAGCATACATGGATACAAAA+CGG | - | chr2_1:3499392-3499411 | None:intergenic | 30.0% | |
| CAATATTGCCAAATAGTGTT+AGG | + | chr2_1:3499521-3499540 | Msa0188320:intron | 30.0% | |
| ! | AAACGAAGTATTATCGAGTT+TGG | + | chr2_1:3499594-3499613 | Msa0188320:intron | 30.0% |
| AATAAAGGATCCAAAAGCTA+TGG | + | chr2_1:3499700-3499719 | Msa0188320:intron | 30.0% | |
| ! | TGAAAGTATGATAGTTTCGA+GGG | + | chr2_1:3499767-3499786 | Msa0188320:intron | 30.0% |
| ATACCCTTATCACTTATTGT+AGG | - | chr2_1:3500019-3500038 | None:intergenic | 30.0% | |
| !! | AGTGATAAGGGTATGTTTTT+AGG | + | chr2_1:3500025-3500044 | Msa0188320:intron | 30.0% |
| CTGAGTTAATCAGAACTAAA+AGG | + | chr2_1:3500249-3500268 | Msa0188320:intron | 30.0% | |
| CAAGAAAGAAAACACTCAAA+AGG | - | chr2_1:3500341-3500360 | None:intergenic | 30.0% | |
| ! | TTTGAGTGTTTTCTTTCTTG+AGG | + | chr2_1:3500341-3500360 | Msa0188320:CDS | 30.0% |
| TTTCATACCATACATAGGAA+AGG | + | chr2_1:3500513-3500532 | Msa0188320:CDS | 30.0% | |
| TCAATTTCTTACTTCTTTCG+TGG | + | chr2_1:3500539-3500558 | Msa0188320:CDS | 30.0% | |
| ! | AGATTAAGCAAAGGTGTATT+TGG | - | chr2_1:3500597-3500616 | None:intergenic | 30.0% |
| TAAATGGAATTTCAACGAAG+TGG | + | chr2_1:3500668-3500687 | Msa0188320:CDS | 30.0% | |
| TTACCAAAACCAGCAAAAAA+TGG | - | chr2_1:3500732-3500751 | None:intergenic | 30.0% | |
| !!! | CTTATTTTACAAACCTTTGG+AGG | + | chr2_1:3500885-3500904 | Msa0188320:intron | 30.0% |
| ! | TTTCTGAGAGACAATATTAC+TGG | + | chr2_1:3500971-3500990 | Msa0188320:intron | 30.0% |
| ! | ATATTACTGGTTGTTGTGAA+AGG | + | chr2_1:3500984-3501003 | Msa0188320:intron | 30.0% |
| !!! | ATTTAGTGTTTTTTCCTTGG+AGG | + | chr2_1:3501085-3501104 | Msa0188320:intron | 30.0% |
| ! | CTTATTAGTCTCAAATACGA+AGG | - | chr2_1:3501204-3501223 | None:intergenic | 30.0% |
| GGAGGGAAAAAGAAATATAA+GGG | - | chr2_1:3501347-3501366 | None:intergenic | 30.0% | |
| AGGAGGGAAAAAGAAATATA+AGG | - | chr2_1:3501348-3501367 | None:intergenic | 30.0% | |
| ! | TTCTTTTTCCCTCCTTTATT+TGG | + | chr2_1:3501353-3501372 | Msa0188320:intron | 30.0% |
| ACATCAGAGAATCCAAATAA+AGG | - | chr2_1:3501368-3501387 | None:intergenic | 30.0% | |
| AATATATGAAAGGAGAGAGA+TGG | - | chr2_1:3501423-3501442 | None:intergenic | 30.0% | |
| AAATTCAATGTGGGAAGAAT+GGG | - | chr2_1:3501528-3501547 | None:intergenic | 30.0% | |
| ! | TGTAGAACTAGTTTATCGGT+TGG | + | chr2_1:3494910-3494929 | Msa0188320:five_prime_UTR | 35.0% |
| !! | GTACAGAAACATTGATTCTC+AGG | + | chr2_1:3494955-3494974 | Msa0188320:five_prime_UTR | 35.0% |
| AGAAAATGAAACCATTGAGG+AGG | - | chr2_1:3495151-3495170 | None:intergenic | 35.0% | |
| AGAGAGAATTGTTCCAATCT+TGG | - | chr2_1:3495372-3495391 | None:intergenic | 35.0% | |
| CAGTATATTCCTCCTAAACT+CGG | + | chr2_1:3495417-3495436 | Msa0188320:intron | 35.0% | |
| TGGATATTACCTGATCAACT+GGG | + | chr2_1:3495460-3495479 | Msa0188320:CDS | 35.0% | |
| ! | TTGAGTCACTTTCACAACAT+TGG | - | chr2_1:3495682-3495701 | None:intergenic | 35.0% |
| AGTGACTCAAAATTGGAGTT+TGG | + | chr2_1:3495692-3495711 | Msa0188320:intron | 35.0% | |
| AAAATAACAGCACGCGAAAT+CGG | - | chr2_1:3495847-3495866 | None:intergenic | 35.0% | |
| !! | CAGACTATTTTGAGAGATAG+AGG | + | chr2_1:3495942-3495961 | Msa0188320:intron | 35.0% |
| !! | GACTATTTTGAGAGATAGAG+GGG | + | chr2_1:3495944-3495963 | Msa0188320:intron | 35.0% |
| !! | ACTATTTTGAGAGATAGAGG+GGG | + | chr2_1:3495945-3495964 | Msa0188320:intron | 35.0% |
| ! | TTTGAAGGTTGATTCACCTT+GGG | + | chr2_1:3496035-3496054 | Msa0188320:intron | 35.0% |
| AATCCTAATAGTGTTTCCCA+AGG | - | chr2_1:3496054-3496073 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr2_1:3496062-3496081 | Msa0188320:intron | 35.0% | |
| AAGAATCTGTTTACCCAGTT+CGG | - | chr2_1:3496226-3496245 | None:intergenic | 35.0% | |
| CCAATAACAAACTTGATGTG+TGG | - | chr2_1:3496342-3496361 | None:intergenic | 35.0% | |
| !! | CCACACATCAAGTTTGTTAT+TGG | + | chr2_1:3496339-3496358 | Msa0188320:intron | 35.0% |
| AAGTATCATGGGTTCAAAGT+GGG | + | chr2_1:3496426-3496445 | Msa0188320:intron | 35.0% | |
| TGGGATATTGAGAAGTTTAC+CGG | + | chr2_1:3496445-3496464 | Msa0188320:intron | 35.0% | |
| !!! | TAACGATTTTGGGTTATGGA+AGG | + | chr2_1:3496471-3496490 | Msa0188320:intron | 35.0% |
| !! | AAGTGTGAGAAAGCTTTGAA+GGG | + | chr2_1:3496523-3496542 | Msa0188320:intron | 35.0% |
| !!! | AGTTTTGAGAGAAGTAGCAA+AGG | + | chr2_1:3496639-3496658 | Msa0188320:intron | 35.0% |
| !! | ATGAGTAGAGTTGTTGCTTT+AGG | - | chr2_1:3496738-3496757 | None:intergenic | 35.0% |
| ACAACTCTACTCATTCAAGA+TGG | + | chr2_1:3496744-3496763 | Msa0188320:intron | 35.0% | |
| ! | CAACAAAATCCTTGATGACT+TGG | + | chr2_1:3496804-3496823 | Msa0188320:intron | 35.0% |
| CAATATTCTCCAAGTCATCA+AGG | - | chr2_1:3496816-3496835 | None:intergenic | 35.0% | |
| ! | TGATGACTTGGAGAATATTG+AGG | + | chr2_1:3496816-3496835 | Msa0188320:intron | 35.0% |
| GAATATTGAGGTGAATCTTG+AGG | + | chr2_1:3496828-3496847 | Msa0188320:intron | 35.0% | |
| !! | GACTTGAGAGTTGATGAAAA+CGG | + | chr2_1:3496997-3497016 | Msa0188320:intron | 35.0% |
| !! | ACTTGAGAGTTGATGAAAAC+GGG | + | chr2_1:3496998-3497017 | Msa0188320:intron | 35.0% |
| ACGGAATTACCATTAATCTC+CGG | - | chr2_1:3497144-3497163 | None:intergenic | 35.0% | |
| ! | AAGGGTTTTCTTCATGAAGA+CGG | + | chr2_1:3497487-3497506 | Msa0188320:intron | 35.0% |
| AGGTTGAAGAATGTATAGCA+CGG | + | chr2_1:3497522-3497541 | Msa0188320:intron | 35.0% | |
| GAATTACCCTAAAAGTCCAA+GGG | + | chr2_1:3497551-3497570 | Msa0188320:intron | 35.0% | |
| CAAACTACACTAGGAATTTC+AGG | - | chr2_1:3497655-3497674 | None:intergenic | 35.0% | |
| CTGAAATTCCTAGTGTAGTT+TGG | + | chr2_1:3497653-3497672 | Msa0188320:intron | 35.0% | |
| TCCGATGATTGAAGAGATTA+AGG | + | chr2_1:3497785-3497804 | Msa0188320:intron | 35.0% | |
| GAGATTAAGGTGTAAACTTG+TGG | + | chr2_1:3497798-3497817 | Msa0188320:intron | 35.0% | |
| !! | AGCAAGGTGTTGATGTTAAA+TGG | + | chr2_1:3497856-3497875 | Msa0188320:intron | 35.0% |
| !! | GCAAGGTGTTGATGTTAAAT+GGG | + | chr2_1:3497857-3497876 | Msa0188320:intron | 35.0% |
| AATGGGCATCATCACTAATT+TGG | + | chr2_1:3497874-3497893 | Msa0188320:intron | 35.0% | |
| ! | TCATCACTAATTTGGAGTCA+AGG | + | chr2_1:3497882-3497901 | Msa0188320:intron | 35.0% |
| AGTGACTCAAAATTGGAGTT+TGG | + | chr2_1:3495692-3495711 | Msa0188320:intron | 35.0% | |
| AAAATAACAGCACGCGAAAT+CGG | - | chr2_1:3495847-3495866 | None:intergenic | 35.0% | |
| !! | CAGACTATTTTGAGAGATAG+AGG | + | chr2_1:3495942-3495961 | Msa0188320:intron | 35.0% |
| !! | GACTATTTTGAGAGATAGAG+GGG | + | chr2_1:3495944-3495963 | Msa0188320:intron | 35.0% |
| !! | ACTATTTTGAGAGATAGAGG+GGG | + | chr2_1:3495945-3495964 | Msa0188320:intron | 35.0% |
| ! | TTTGAAGGTTGATTCACCTT+GGG | + | chr2_1:3496035-3496054 | Msa0188320:intron | 35.0% |
| AATCCTAATAGTGTTTCCCA+AGG | - | chr2_1:3496054-3496073 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr2_1:3496062-3496081 | Msa0188320:intron | 35.0% | |
| AAGAATCTGTTTACCCAGTT+CGG | - | chr2_1:3496226-3496245 | None:intergenic | 35.0% | |
| CCAATAACAAACTTGATGTG+TGG | - | chr2_1:3496342-3496361 | None:intergenic | 35.0% | |
| !! | CCACACATCAAGTTTGTTAT+TGG | + | chr2_1:3496339-3496358 | Msa0188320:intron | 35.0% |
| GAAATGAAATTCCGTAAAGC+AGG | + | chr2_1:3499065-3499084 | Msa0188320:intron | 35.0% | |
| AGCATACATGGATACAAAAC+GGG | - | chr2_1:3499391-3499410 | None:intergenic | 35.0% | |
| AGAAGTCCAAAATACTCGTT+GGG | - | chr2_1:3499420-3499439 | None:intergenic | 35.0% | |
| AAGAAGTCCAAAATACTCGT+TGG | - | chr2_1:3499421-3499440 | None:intergenic | 35.0% | |
| CTATGAAGCCTAACACTATT+TGG | - | chr2_1:3499532-3499551 | None:intergenic | 35.0% | |
| CAAATAGTGTTAGGCTTCAT+AGG | + | chr2_1:3499530-3499549 | Msa0188320:intron | 35.0% | |
| ! | CTGAAAGTATGATAGTTTCG+AGG | + | chr2_1:3499766-3499785 | Msa0188320:intron | 35.0% |
| TACAATGACATTGCCAAGTA+TGG | + | chr2_1:3500048-3500067 | Msa0188320:CDS | 35.0% | |
| ACAATGACATTGCCAAGTAT+GGG | + | chr2_1:3500049-3500068 | Msa0188320:CDS | 35.0% | |
| AAACTTAGATCTTCCCATTG+CGG | - | chr2_1:3500079-3500098 | None:intergenic | 35.0% | |
| !!! | GCATAGTTACTGTGTTGTTT+TGG | - | chr2_1:3500122-3500141 | None:intergenic | 35.0% |
| TATCAAGCAAAAAGACCATC+TGG | + | chr2_1:3500150-3500169 | Msa0188320:CDS | 35.0% | |
| ! | CGAGTTCTTATGTTATTTGC+AGG | + | chr2_1:3500477-3500496 | Msa0188320:intron | 35.0% |
| TATTTGCAGGTTTATGCAAC+TGG | + | chr2_1:3500490-3500509 | Msa0188320:intron | 35.0% | |
| ! | ACTGGTTTCATACCATACAT+AGG | + | chr2_1:3500508-3500527 | Msa0188320:CDS | 35.0% |
| ATATTACTGCTTCGAGTATG+TGG | + | chr2_1:3500570-3500589 | Msa0188320:intron | 35.0% | |
| AACTTGAATCCAATTGGTGA+AGG | - | chr2_1:3500623-3500642 | None:intergenic | 35.0% | |
| TGGACTACTTTGAATCTTAC+TGG | + | chr2_1:3500706-3500725 | Msa0188320:CDS | 35.0% | |
| ! | TTGTTGTGAAAGGATGGATT+GGG | + | chr2_1:3500994-3501013 | Msa0188320:intron | 35.0% |
| ! | TAAGAGATTTGTGCCATTAC+AGG | + | chr2_1:3501220-3501239 | Msa0188320:intron | 35.0% |
| AAGAATATAGCCAAAACGCA+AGG | - | chr2_1:3501250-3501269 | None:intergenic | 35.0% | |
| ATAATCCCATAACTCACAAG+AGG | - | chr2_1:3501280-3501299 | None:intergenic | 35.0% | |
| TCTTGTGAGTTATGGGATTA+TGG | + | chr2_1:3501279-3501298 | Msa0188320:CDS | 35.0% | |
| !!! | TATGGCTATACTTTTTCCAC+TGG | + | chr2_1:3501297-3501316 | Msa0188320:CDS | 35.0% |
| AACAAAGTCATACATACCAG+TGG | - | chr2_1:3501316-3501335 | None:intergenic | 35.0% | |
| ACTGGTATGTATGACTTTGT+TGG | + | chr2_1:3501315-3501334 | Msa0188320:intron | 35.0% | |
| CAGAGAATCCAAATAAAGGA+GGG | - | chr2_1:3501364-3501383 | None:intergenic | 35.0% | |
| TCAGAGAATCCAAATAAAGG+AGG | - | chr2_1:3501365-3501384 | None:intergenic | 35.0% | |
| TATCTTTCTCTCTCCCTATA+AGG | - | chr2_1:3501456-3501475 | None:intergenic | 35.0% | |
| GATACAGATTTCACATGACA+CGG | + | chr2_1:3501472-3501491 | Msa0188320:intron | 35.0% | |
| CAAATTCAATGTGGGAAGAA+TGG | - | chr2_1:3501529-3501548 | None:intergenic | 35.0% | |
| ! | AGTTTGTTCTAACTGCAACT+GGG | + | chr2_1:3501657-3501676 | Msa0188320:intron | 35.0% |
| AAAAATAAATGGAGAGCTGC+AGG | + | chr2_1:3501710-3501729 | Msa0188320:CDS | 35.0% | |
| TTCCAACCATAGAATACCAC+CGG | - | chr2_1:3495042-3495061 | None:intergenic | 40.0% | |
| ! | GTGTTGTTATTCTCTGTCTC+AGG | + | chr2_1:3495090-3495109 | Msa0188320:CDS | 40.0% |
| GGTTTGGGAGAGGAAAATAA+GGG | - | chr2_1:3495348-3495367 | None:intergenic | 40.0% | |
| ! | TGGTTTGGGAGAGGAAAATA+AGG | - | chr2_1:3495349-3495368 | None:intergenic | 40.0% |
| ! | TGTTCCAATCTTGGTGGTTT+GGG | - | chr2_1:3495363-3495382 | None:intergenic | 40.0% |
| ! | TTGTTCCAATCTTGGTGGTT+TGG | - | chr2_1:3495364-3495383 | None:intergenic | 40.0% |
| GAGAATTGTTCCAATCTTGG+TGG | - | chr2_1:3495369-3495388 | None:intergenic | 40.0% | |
| GTAATATCCACCACAAAGCA+GGG | - | chr2_1:3495450-3495469 | None:intergenic | 40.0% | |
| GTGGATATTACCTGATCAAC+TGG | + | chr2_1:3495459-3495478 | Msa0188320:CDS | 40.0% | |
| TTATGAGAACCCAGTTGATC+AGG | - | chr2_1:3495472-3495491 | None:intergenic | 40.0% | |
| TCTCATAAACTGTGTGCCTT+AGG | + | chr2_1:3495484-3495503 | Msa0188320:CDS | 40.0% | |
| GACTCAAAATTGGAGTTTGG+AGG | + | chr2_1:3495695-3495714 | Msa0188320:intron | 40.0% | |
| ! | TTGCTGAAAGTACAAATCGG+TGG | + | chr2_1:3495731-3495750 | Msa0188320:intron | 40.0% |
| GCTTTCTGTTCGGGAAAAAT+CGG | + | chr2_1:3495798-3495817 | Msa0188320:intron | 40.0% | |
| TTGTCTCTTGGCAACAAACT+AGG | + | chr2_1:3496011-3496030 | Msa0188320:intron | 40.0% | |
| TGTCTCTTGGCAACAAACTA+GGG | + | chr2_1:3496012-3496031 | Msa0188320:intron | 40.0% | |
| ! | GTTTGAAGGTTGATTCACCT+TGG | + | chr2_1:3496034-3496053 | Msa0188320:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | + | chr2_1:3496048-3496067 | Msa0188320:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | + | chr2_1:3496068-3496087 | Msa0188320:intron | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | + | chr2_1:3496168-3496187 | Msa0188320:intron | 40.0% |
| AAACTTGATGTGTGGAGCAA+GGG | - | chr2_1:3496334-3496353 | None:intergenic | 40.0% | |
| CTCATCGAATTCGCAACAAT+TGG | + | chr2_1:3496370-3496389 | Msa0188320:intron | 40.0% | |
| CAAGTATCATGGGTTCAAAG+TGG | + | chr2_1:3496425-3496444 | Msa0188320:intron | 40.0% | |
| ! | TTTACCGGCGATAACGATTT+TGG | + | chr2_1:3496460-3496479 | Msa0188320:intron | 40.0% |
| ! | TTACCGGCGATAACGATTTT+GGG | + | chr2_1:3496461-3496480 | Msa0188320:intron | 40.0% |
| TAACCCAAAATCGTTATCGC+CGG | - | chr2_1:3496467-3496486 | None:intergenic | 40.0% | |
| !!! | GCGATAACGATTTTGGGTTA+TGG | + | chr2_1:3496467-3496486 | Msa0188320:intron | 40.0% |
| TGGGTTATGGAAGGTAAAGA+TGG | + | chr2_1:3496480-3496499 | Msa0188320:intron | 40.0% | |
| ATGGAAGGTAAAGATGGAAG+CGG | + | chr2_1:3496486-3496505 | Msa0188320:intron | 40.0% | |
| ! | GAAGTGTGAGAAAGCTTTGA+AGG | + | chr2_1:3496522-3496541 | Msa0188320:intron | 40.0% |
| CTCTCAAAACTTTATCTCCG+AGG | - | chr2_1:3496630-3496649 | None:intergenic | 40.0% | |
| ! | TGACAAAGTCTTTGGCTCAT+CGG | + | chr2_1:3496707-3496726 | Msa0188320:intron | 40.0% |
| ACTCTACTCATTCAAGATGG+TGG | + | chr2_1:3496747-3496766 | Msa0188320:intron | 40.0% | |
| !! | ATTCAAGATGGTGGAGTCAA+AGG | + | chr2_1:3496756-3496775 | Msa0188320:intron | 40.0% |
| ACCATGCTCTATGGAAAAGA+AGG | + | chr2_1:3496913-3496932 | Msa0188320:intron | 40.0% | |
| !! | AAAAGAAGGCACTGTTACCT+TGG | + | chr2_1:3496927-3496946 | Msa0188320:intron | 40.0% |
| TACCTTGGAAGAAGTTCAAG+CGG | + | chr2_1:3496942-3496961 | Msa0188320:intron | 40.0% | |
| !! | CTTGAGAGTTGATGAAAACG+GGG | + | chr2_1:3496999-3497018 | Msa0188320:intron | 40.0% |
| AAGGCCTAAGTGTTTCAAGA+GGG | + | chr2_1:3497022-3497041 | Msa0188320:intron | 40.0% | |
| CATTCCCTCTTGAAACACTT+AGG | - | chr2_1:3497029-3497048 | None:intergenic | 40.0% | |
| CTAAGTGTTTCAAGAGGGAA+TGG | + | chr2_1:3497027-3497046 | Msa0188320:intron | 40.0% | |
| TCTTGTTACTACTCTTTCCC+CGG | - | chr2_1:3497068-3497087 | None:intergenic | 40.0% | |
| TCACTTCAAGAAGGATTGTC+CGG | + | chr2_1:3497122-3497141 | Msa0188320:intron | 40.0% | |
| AAGGATTGTCCGGAGATTAA+TGG | + | chr2_1:3497132-3497151 | Msa0188320:intron | 40.0% | |
| TTCCGTACAAATTGTCTCTG+AGG | + | chr2_1:3497158-3497177 | Msa0188320:intron | 40.0% | |
| TCCGTACAAATTGTCTCTGA+GGG | + | chr2_1:3497159-3497178 | Msa0188320:intron | 40.0% | |
| ACCCTCAGAGACAATTTGTA+CGG | - | chr2_1:3497163-3497182 | None:intergenic | 40.0% | |
| ! | AATTGTCTCTGAGGGTTATG+AGG | + | chr2_1:3497167-3497186 | Msa0188320:intron | 40.0% |
| !! | TTTGATGGTGTGCTGTTTAG+AGG | + | chr2_1:3497200-3497219 | Msa0188320:intron | 40.0% |
| AAGGTGATGTTTCTCACCTT+GGG | + | chr2_1:3497226-3497245 | Msa0188320:intron | 40.0% | |
| TTAAACACTCAACATCAGCC+TGG | + | chr2_1:3497287-3497306 | Msa0188320:intron | 40.0% | |
| AGGTTCAAGGAAGACATAGT+GGG | + | chr2_1:3497353-3497372 | Msa0188320:intron | 40.0% | |
| ! | GTACTCATTTGCTAGTTGAG+AGG | + | chr2_1:3497378-3497397 | Msa0188320:intron | 40.0% |
| ! | TCATTTGCTAGTTGAGAGGT+TGG | + | chr2_1:3497382-3497401 | Msa0188320:intron | 40.0% |
| ! | GTTTTCTTCATGAAGACGGA+AGG | + | chr2_1:3497491-3497510 | Msa0188320:intron | 40.0% |
| GCTATACATTCTTCAACCTC+CGG | - | chr2_1:3497521-3497540 | None:intergenic | 40.0% | |
| GGAATTACCCTAAAAGTCCA+AGG | + | chr2_1:3497550-3497569 | Msa0188320:intron | 40.0% | |
| ! | CAATCACCCTTGGACTTTTA+GGG | - | chr2_1:3497560-3497579 | None:intergenic | 40.0% |
| TGTCTCGTATTGAAGAGGTA+TGG | + | chr2_1:3497611-3497630 | Msa0188320:intron | 40.0% | |
| CCTTGTATCCAAACTACACT+AGG | - | chr2_1:3497664-3497683 | None:intergenic | 40.0% | |
| CCTAGTGTAGTTTGGATACA+AGG | + | chr2_1:3497661-3497680 | Msa0188320:intron | 40.0% | |
| TTGGACACAAGGATCTTCAA+AGG | + | chr2_1:3497750-3497769 | Msa0188320:intron | 40.0% | |
| TGGACACAAGGATCTTCAAA+GGG | + | chr2_1:3497751-3497770 | Msa0188320:intron | 40.0% | |
| TGTAAACTTGTGGAGCTACT+TGG | + | chr2_1:3497808-3497827 | Msa0188320:intron | 40.0% | |
| ! | TCACTAATTTGGAGTCAAGG+TGG | + | chr2_1:3497885-3497904 | Msa0188320:intron | 40.0% |
| GACTCAAAATTGGAGTTTGG+AGG | + | chr2_1:3495695-3495714 | Msa0188320:intron | 40.0% | |
| ! | TTGCTGAAAGTACAAATCGG+TGG | + | chr2_1:3495731-3495750 | Msa0188320:intron | 40.0% |
| GCTTTCTGTTCGGGAAAAAT+CGG | + | chr2_1:3495798-3495817 | Msa0188320:intron | 40.0% | |
| TTGTCTCTTGGCAACAAACT+AGG | + | chr2_1:3496011-3496030 | Msa0188320:intron | 40.0% | |
| TGTCTCTTGGCAACAAACTA+GGG | + | chr2_1:3496012-3496031 | Msa0188320:intron | 40.0% | |
| ! | GTTTGAAGGTTGATTCACCT+TGG | + | chr2_1:3496034-3496053 | Msa0188320:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | + | chr2_1:3496048-3496067 | Msa0188320:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | + | chr2_1:3496068-3496087 | Msa0188320:intron | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | + | chr2_1:3496168-3496187 | Msa0188320:intron | 40.0% |
| AAACTTGATGTGTGGAGCAA+GGG | - | chr2_1:3496334-3496353 | None:intergenic | 40.0% | |
| AAAGCTTTCGATGATGAGCT+TGG | + | chr2_1:3498827-3498846 | Msa0188320:intron | 40.0% | |
| CCAGGACTCTCAAATTTCTA+GGG | - | chr2_1:3499166-3499185 | None:intergenic | 40.0% | |
| CCTAGAAATTTGAGAGTCCT+GGG | + | chr2_1:3499164-3499183 | Msa0188320:intron | 40.0% | |
| ! | TTCCTACCCAACGAGTATTT+TGG | + | chr2_1:3499411-3499430 | Msa0188320:intron | 40.0% |
| TAGCTTATGACTCCCAACAT+AGG | + | chr2_1:3499486-3499505 | Msa0188320:intron | 40.0% | |
| ATGTGCTTGACACCTATGTT+GGG | - | chr2_1:3499501-3499520 | None:intergenic | 40.0% | |
| GTCTACAGAATAAACCCACA+GGG | - | chr2_1:3499726-3499745 | None:intergenic | 40.0% | |
| AGTCTACAGAATAAACCCAC+AGG | - | chr2_1:3499727-3499746 | None:intergenic | 40.0% | |
| CTCAGCGAGAGAAAAAAGAA+AGG | - | chr2_1:3499881-3499900 | None:intergenic | 40.0% | |
| ACTATCTGATAAAGGCAGAG+TGG | - | chr2_1:3499987-3500006 | None:intergenic | 40.0% | |
| GGGAAGATCTAAGTTTACTG+TGG | + | chr2_1:3500083-3500102 | Msa0188320:CDS | 40.0% | |
| !!! | AGTTACTGTGTTGTTTTGGC+CGG | - | chr2_1:3500118-3500137 | None:intergenic | 40.0% |
| TACTGTGTTTGCTTAACCCA+GGG | + | chr2_1:3500278-3500297 | Msa0188320:intron | 40.0% | |
| TTGAGCACCTTTCCTATGTA+TGG | - | chr2_1:3500523-3500542 | None:intergenic | 40.0% | |
| TGAAGGAGGAGATTAAGCAA+AGG | - | chr2_1:3500606-3500625 | None:intergenic | 40.0% | |
| TAATCTCCTCCTTCACCAAT+TGG | + | chr2_1:3500611-3500630 | Msa0188320:intron | 40.0% | |
| TTGAATCCAATTGGTGAAGG+AGG | - | chr2_1:3500620-3500639 | None:intergenic | 40.0% | |
| !!! | TCTTACTGGCCATTTTTTGC+TGG | + | chr2_1:3500720-3500739 | Msa0188320:CDS | 40.0% |
| !!! | TGGCCATTTTTTGCTGGTTT+TGG | + | chr2_1:3500726-3500745 | Msa0188320:CDS | 40.0% |
| AAGAACTGTACTTCCTCCAA+AGG | - | chr2_1:3500901-3500920 | None:intergenic | 40.0% | |
| ! | TACTGGTTGTTGTGAAAGGA+TGG | + | chr2_1:3500988-3501007 | Msa0188320:intron | 40.0% |
| GTTGTTGTGAAAGGATGGAT+TGG | + | chr2_1:3500993-3501012 | Msa0188320:intron | 40.0% | |
| !! | AAAGGATGGATTGGGTGTAT+GGG | + | chr2_1:3501002-3501021 | Msa0188320:intron | 40.0% |
| GCACACTTTCCAAAGTAGAA+AGG | - | chr2_1:3501042-3501061 | None:intergenic | 40.0% | |
| CTCAAATACGAAGGAACCAT+AGG | - | chr2_1:3501195-3501214 | None:intergenic | 40.0% | |
| TTCTCTCCTCTTGTGAGTTA+TGG | + | chr2_1:3501271-3501290 | Msa0188320:CDS | 40.0% | |
| TCTCTCCTCTTGTGAGTTAT+GGG | + | chr2_1:3501272-3501291 | Msa0188320:CDS | 40.0% | |
| ! | CAGTTTGTTCTAACTGCAAC+TGG | + | chr2_1:3501656-3501675 | Msa0188320:intron | 40.0% |
| ! | CTGTCTAGAGTATAGAGTGA+AGG | - | chr2_1:3501799-3501818 | None:intergenic | 40.0% |
| GGAATGGAAAGGTTGAAGTC+CGG | + | chr2_1:3495020-3495039 | Msa0188320:CDS | 45.0% | |
| TGAAGTCCGGTGGTATTCTA+TGG | + | chr2_1:3495033-3495052 | Msa0188320:CDS | 45.0% | |
| GGTGGTATTCTATGGTTGGA+AGG | + | chr2_1:3495041-3495060 | Msa0188320:CDS | 45.0% | |
| AGTTCGGAGCAAAAGAGGTT+TGG | - | chr2_1:3495117-3495136 | None:intergenic | 45.0% | |
| ! | AAACCTCTTTTGCTCCGAAC+TGG | + | chr2_1:3495116-3495135 | Msa0188320:CDS | 45.0% |
| GGTAATATCCACCACAAAGC+AGG | - | chr2_1:3495451-3495470 | None:intergenic | 45.0% | |
| CATAAACTGTGTGCCTTAGG+TGG | + | chr2_1:3495487-3495506 | Msa0188320:CDS | 45.0% | |
| TCCCAAAAGGCAGCCAAAAT+CGG | - | chr2_1:3495777-3495796 | None:intergenic | 45.0% | |
| !! | CTTTTGGGAGGCTTTCTGTT+CGG | + | chr2_1:3495788-3495807 | Msa0188320:intron | 45.0% |
| !! | TTTTGGGAGGCTTTCTGTTC+GGG | + | chr2_1:3495789-3495808 | Msa0188320:intron | 45.0% |
| TTCTGTTCGGGAAAAATCGG+TGG | + | chr2_1:3495801-3495820 | Msa0188320:intron | 45.0% | |
| GGCAACAAACTAGGGTTTGA+AGG | + | chr2_1:3496020-3496039 | Msa0188320:intron | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | + | chr2_1:3496069-3496088 | Msa0188320:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | + | chr2_1:3496097-3496116 | Msa0188320:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | + | chr2_1:3496100-3496119 | Msa0188320:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | + | chr2_1:3496101-3496120 | Msa0188320:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | + | chr2_1:3496167-3496186 | Msa0188320:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | - | chr2_1:3496203-3496222 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | - | chr2_1:3496204-3496223 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | - | chr2_1:3496205-3496224 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | chr2_1:3496209-3496228 | Msa0188320:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | + | chr2_1:3496210-3496229 | Msa0188320:intron | 45.0% | |
| CAAACTTGATGTGTGGAGCA+AGG | - | chr2_1:3496335-3496354 | None:intergenic | 45.0% | |
| !! | GAGAAAGCTTTGAAGGGTGA+AGG | + | chr2_1:3496529-3496548 | Msa0188320:intron | 45.0% |
| ! | GCCTTCTTTTCCATAGAGCA+TGG | - | chr2_1:3496917-3496936 | None:intergenic | 45.0% |
| CTTCGACTTAGTCAACTCCT+TGG | - | chr2_1:3496977-3496996 | None:intergenic | 45.0% | |
| CAAGGAGTTGACTAAGTCGA+AGG | + | chr2_1:3496975-3496994 | Msa0188320:intron | 45.0% | |
| !! | AGAGTTGATGAAAACGGGGA+AGG | + | chr2_1:3497003-3497022 | Msa0188320:intron | 45.0% |
| GAAGGCCTAAGTGTTTCAAG+AGG | + | chr2_1:3497021-3497040 | Msa0188320:intron | 45.0% | |
| AGTGTTTCAAGAGGGAATGG+TGG | + | chr2_1:3497030-3497049 | Msa0188320:intron | 45.0% | |
| CAAGATGGGTCACTTCAAGA+AGG | + | chr2_1:3497113-3497132 | Msa0188320:intron | 45.0% | |
| TCTGAGGGTTATGAGGATGT+AGG | + | chr2_1:3497174-3497193 | Msa0188320:intron | 45.0% | |
| TGAGGATGTAGGTGCTTTGA+TGG | + | chr2_1:3497185-3497204 | Msa0188320:intron | 45.0% | |
| !! | GTGTGCTGTTTAGAGGATGA+AGG | + | chr2_1:3497207-3497226 | Msa0188320:intron | 45.0% |
| GAAGGTGATGTTTCTCACCT+TGG | + | chr2_1:3497225-3497244 | Msa0188320:intron | 45.0% | |
| AGGTGATGTTTCTCACCTTG+GGG | + | chr2_1:3497227-3497246 | Msa0188320:intron | 45.0% | |
| ! | TACTCATGATCTACCGGTTG+AGG | + | chr2_1:3497327-3497346 | Msa0188320:intron | 45.0% |
| GAGGTTCAAGGAAGACATAG+TGG | + | chr2_1:3497352-3497371 | Msa0188320:intron | 45.0% | |
| TTAGGTGGAGTTGAACACAC+CGG | + | chr2_1:3497415-3497434 | Msa0188320:intron | 45.0% | |
| TATGCTCTAGTGGTGAGCAA+GGG | + | chr2_1:3497469-3497488 | Msa0188320:intron | 45.0% | |
| AGAATGTATAGCACGGCTTG+TGG | + | chr2_1:3497529-3497548 | Msa0188320:intron | 45.0% | |
| ! | CCAATCACCCTTGGACTTTT+AGG | - | chr2_1:3497561-3497580 | None:intergenic | 45.0% |
| CCTAAAAGTCCAAGGGTGAT+TGG | + | chr2_1:3497558-3497577 | Msa0188320:intron | 45.0% | |
| TGGATGCAAGGTGATCTTCA+AGG | + | chr2_1:3497578-3497597 | Msa0188320:intron | 45.0% | |
| CAAGGTGATCTTCAAGGAAG+CGG | + | chr2_1:3497584-3497603 | Msa0188320:intron | 45.0% | |
| AAGGTGATCTTCAAGGAAGC+GGG | + | chr2_1:3497585-3497604 | Msa0188320:intron | 45.0% | |
| GGAGATGTCTCGTATTGAAG+AGG | + | chr2_1:3497606-3497625 | Msa0188320:intron | 45.0% | |
| GGATACAAGGATCTTCGAGA+AGG | + | chr2_1:3497674-3497693 | Msa0188320:intron | 45.0% | |
| TACAAGGATCTTCGAGAAGG+CGG | + | chr2_1:3497677-3497696 | Msa0188320:intron | 45.0% | |
| GAGGTTAAGGTGTGTACTTG+TGG | + | chr2_1:3497702-3497721 | Msa0188320:intron | 45.0% | |
| CCTTGTGTCCAAACTACTCA+AGG | - | chr2_1:3497742-3497761 | None:intergenic | 45.0% | |
| CCTTGAGTAGTTTGGACACA+AGG | + | chr2_1:3497739-3497758 | Msa0188320:intron | 45.0% | |
| GGACACAAGGATCTTCAAAG+GGG | + | chr2_1:3497752-3497771 | Msa0188320:intron | 45.0% | |
| TCCCAAAAGGCAGCCAAAAT+CGG | - | chr2_1:3495777-3495796 | None:intergenic | 45.0% | |
| !! | CTTTTGGGAGGCTTTCTGTT+CGG | + | chr2_1:3495788-3495807 | Msa0188320:intron | 45.0% |
| !! | TTTTGGGAGGCTTTCTGTTC+GGG | + | chr2_1:3495789-3495808 | Msa0188320:intron | 45.0% |
| TTCTGTTCGGGAAAAATCGG+TGG | + | chr2_1:3495801-3495820 | Msa0188320:intron | 45.0% | |
| GGCAACAAACTAGGGTTTGA+AGG | + | chr2_1:3496020-3496039 | Msa0188320:intron | 45.0% | |
| GGATTGAGTCTCTTGGTTAC+GGG | + | chr2_1:3496069-3496088 | Msa0188320:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | + | chr2_1:3496097-3496116 | Msa0188320:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | + | chr2_1:3496100-3496119 | Msa0188320:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | + | chr2_1:3496101-3496120 | Msa0188320:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | + | chr2_1:3496167-3496186 | Msa0188320:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | - | chr2_1:3496203-3496222 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | - | chr2_1:3496204-3496223 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | - | chr2_1:3496205-3496224 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | chr2_1:3496209-3496228 | Msa0188320:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | + | chr2_1:3496210-3496229 | Msa0188320:intron | 45.0% | |
| CAAACTTGATGTGTGGAGCA+AGG | - | chr2_1:3496335-3496354 | None:intergenic | 45.0% | |
| AAGTTTCAAAAGCCGGTGCT+TGG | + | chr2_1:3498712-3498731 | Msa0188320:intron | 45.0% | |
| ACAGGGAGAATGGCTATCAA+GGG | - | chr2_1:3499004-3499023 | None:intergenic | 45.0% | |
| AACAGGGAGAATGGCTATCA+AGG | - | chr2_1:3499005-3499024 | None:intergenic | 45.0% | |
| CCCTAGAAATTTGAGAGTCC+TGG | + | chr2_1:3499163-3499182 | Msa0188320:intron | 45.0% | |
| CCCAGGACTCTCAAATTTCT+AGG | - | chr2_1:3499167-3499186 | None:intergenic | 45.0% | |
| ! | GTTGGGTAGGAAAGCATACA+TGG | - | chr2_1:3499403-3499422 | None:intergenic | 45.0% |
| GTCCAAAATACTCGTTGGGT+AGG | - | chr2_1:3499416-3499435 | None:intergenic | 45.0% | |
| GATGTGCTTGACACCTATGT+TGG | - | chr2_1:3499502-3499521 | None:intergenic | 45.0% | |
| ! | TCGAGGGAGTTGTCTTTTAG+AGG | + | chr2_1:3499783-3499802 | Msa0188320:intron | 45.0% |
| ! | TTTTCTCTCGCTGAGAGACT+AGG | + | chr2_1:3499886-3499905 | Msa0188320:intron | 45.0% |
| TTTCTCTCGCTGAGAGACTA+GGG | + | chr2_1:3499887-3499906 | Msa0188320:intron | 45.0% | |
| AGAGCAAGAGTTCGAAGAAG+TGG | - | chr2_1:3499926-3499945 | None:intergenic | 45.0% | |
| AAGTATGGGTATGCCGCAAT+GGG | + | chr2_1:3500063-3500082 | Msa0188320:CDS | 45.0% | |
| TTTACTGTGGATAGCAGCTC+CGG | + | chr2_1:3500096-3500115 | Msa0188320:CDS | 45.0% | |
| AGTTAGAACCTAACCCTCCA+AGG | - | chr2_1:3500176-3500195 | None:intergenic | 45.0% | |
| CTACTGTGTTTGCTTAACCC+AGG | + | chr2_1:3500277-3500296 | Msa0188320:intron | 45.0% | |
| CCTATTCCAATCATGACCCT+GGG | - | chr2_1:3500297-3500316 | None:intergenic | 45.0% | |
| TCCTATTCCAATCATGACCC+TGG | - | chr2_1:3500298-3500317 | None:intergenic | 45.0% | |
| CATGATTGGAATAGGAGAGC+AGG | + | chr2_1:3500302-3500321 | Msa0188320:CDS | 45.0% | |
| !! | GAAAGGATGGATTGGGTGTA+TGG | + | chr2_1:3501001-3501020 | Msa0188320:intron | 45.0% |
| GTGTATGGGAATGAGGATTG+AGG | + | chr2_1:3501016-3501035 | Msa0188320:intron | 45.0% | |
| GGATTGAGGCCTTTCTACTT+TGG | + | chr2_1:3501030-3501049 | Msa0188320:intron | 45.0% | |
| AAATCTCACACAAGCCTCCA+AGG | - | chr2_1:3501102-3501121 | None:intergenic | 45.0% | |
| AACGCAAGGACTTCCTGTAA+TGG | - | chr2_1:3501236-3501255 | None:intergenic | 45.0% | |
| ! | TACAGGAAGTCCTTGCGTTT+TGG | + | chr2_1:3501237-3501256 | Msa0188320:intron | 45.0% |
| ! | CAATGTGGGAAGAATGGGTT+TGG | - | chr2_1:3501523-3501542 | None:intergenic | 45.0% |
| GCTATGCTATAGTGTCGTGA+GGG | + | chr2_1:3501602-3501621 | Msa0188320:intron | 45.0% | |
| TGTTCTAACTGCAACTGGGT+CGG | + | chr2_1:3501661-3501680 | Msa0188320:CDS | 45.0% | |
| !! | TTAATAATTTAATATATGAA+AGG | - | chr2_1:3501433-3501452 | None:intergenic | 5.0% |
| TGATGCGATGCGATCAGGAA+TGG | + | chr2_1:3495004-3495023 | Msa0188320:exon | 50.0% | |
| CGATGCGATCAGGAATGGAA+AGG | + | chr2_1:3495009-3495028 | Msa0188320:exon | 50.0% | |
| ATGGAAAGGTTGAAGTCCGG+TGG | + | chr2_1:3495023-3495042 | Msa0188320:CDS | 50.0% | |
| GTCCGGTGGTATTCTATGGT+TGG | + | chr2_1:3495037-3495056 | Msa0188320:CDS | 50.0% | |
| TGTCCAGTTCGGAGCAAAAG+AGG | - | chr2_1:3495122-3495141 | None:intergenic | 50.0% | |
| GGAGGAAACACTGTCCAGTT+CGG | - | chr2_1:3495133-3495152 | None:intergenic | 50.0% | |
| GGACAGTGTTTCCTCCTCAA+TGG | + | chr2_1:3495137-3495156 | Msa0188320:CDS | 50.0% | |
| ! | CAATCTTGGTGGTTTGGGAG+AGG | - | chr2_1:3495358-3495377 | None:intergenic | 50.0% |
| CTCTCCCAAACCACCAAGAT+TGG | + | chr2_1:3495356-3495375 | Msa0188320:intron | 50.0% | |
| GGATGACAACCGAGTTTAGG+AGG | - | chr2_1:3495429-3495448 | None:intergenic | 50.0% | |
| CAGGGATGACAACCGAGTTT+AGG | - | chr2_1:3495432-3495451 | None:intergenic | 50.0% | |
| TTGTCATCCCTGCTTTGTGG+TGG | + | chr2_1:3495440-3495459 | Msa0188320:CDS | 50.0% | |
| GTACAAATCGGTGGCCGATT+TGG | + | chr2_1:3495740-3495759 | Msa0188320:intron | 50.0% | |
| !! | CGGTGGCCGATTTGGAAAAT+CGG | + | chr2_1:3495748-3495767 | Msa0188320:intron | 50.0% |
| !! | TGGCCGATTTGGAAAATCGG+TGG | + | chr2_1:3495751-3495770 | Msa0188320:intron | 50.0% |
| !!! | CGGCCACCGATTTTCCAAAT+CGG | - | chr2_1:3495757-3495776 | None:intergenic | 50.0% |
| !! | GGAAAATCGGTGGCCGATTT+TGG | + | chr2_1:3495761-3495780 | Msa0188320:intron | 50.0% |
| !!! | GCCGATTTTGGCTGCCTTTT+GGG | + | chr2_1:3495773-3495792 | Msa0188320:intron | 50.0% |
| !!! | GATTTTGGCTGCCTTTTGGG+AGG | + | chr2_1:3495776-3495795 | Msa0188320:intron | 50.0% |
| CGAACAGAAAGCCTCCCAAA+AGG | - | chr2_1:3495790-3495809 | None:intergenic | 50.0% | |
| GGAAAAATCGGTGGCCGATT+TGG | + | chr2_1:3495810-3495829 | Msa0188320:intron | 50.0% | |
| !! | CGGTGGCCGATTTGGAAAAT+CGG | + | chr2_1:3495748-3495767 | Msa0188320:intron | 50.0% |
| !! | TGGCCGATTTGGAAAATCGG+TGG | + | chr2_1:3495751-3495770 | Msa0188320:intron | 50.0% |
| !!! | CGGCCACCGATTTTCCAAAT+CGG | - | chr2_1:3495757-3495776 | None:intergenic | 50.0% |
| AGATAGAGGGGGCTGAAACA+AGG | + | chr2_1:3495956-3495975 | Msa0188320:intron | 50.0% | |
| GATAGAGGGGGCTGAAACAA+GGG | + | chr2_1:3495957-3495976 | Msa0188320:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | + | chr2_1:3496075-3496094 | Msa0188320:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | + | chr2_1:3496199-3496218 | Msa0188320:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | - | chr2_1:3496206-3496225 | None:intergenic | 50.0% | |
| ATCCTTTGACCTTTGCCCCA+CGG | - | chr2_1:3496402-3496421 | None:intergenic | 50.0% | |
| GAAGGGTGAAGGTTCGTTAC+CGG | + | chr2_1:3496540-3496559 | Msa0188320:intron | 50.0% | |
| ! | AGTGCCATTGTCTTGTGCCT+CGG | + | chr2_1:3496610-3496629 | Msa0188320:intron | 50.0% |
| ATCTCCGAGGCACAAGACAA+TGG | - | chr2_1:3496617-3496636 | None:intergenic | 50.0% | |
| AGTAGCAAAGGAACCAACCG+CGG | + | chr2_1:3496651-3496670 | Msa0188320:intron | 50.0% | |
| GGCCATCATGGAGCAACTTA+CGG | + | chr2_1:3496777-3496796 | Msa0188320:intron | 50.0% | |
| CTCCGTAAGTTGCTCCATGA+TGG | - | chr2_1:3496782-3496801 | None:intergenic | 50.0% | |
| AGCCGCTTGAACTTCTTCCA+AGG | - | chr2_1:3496947-3496966 | None:intergenic | 50.0% | |
| !! | TCAAGCGGCTTTGAGAACCA+AGG | + | chr2_1:3496957-3496976 | Msa0188320:intron | 50.0% |
| GTTTCAAGAGGGAATGGTGG+AGG | + | chr2_1:3497033-3497052 | Msa0188320:intron | 50.0% | |
| ! | ATGGTGGAGGTAGAGGTAAC+CGG | + | chr2_1:3497046-3497065 | Msa0188320:intron | 50.0% |
| GGTGATGTTTCTCACCTTGG+GGG | + | chr2_1:3497228-3497247 | Msa0188320:intron | 50.0% | |
| ! | TCATGATCTACCGGTTGAGG+TGG | + | chr2_1:3497330-3497349 | Msa0188320:intron | 50.0% |
| GAGGTTGGAAGCTCAGCTTT+AGG | + | chr2_1:3497397-3497416 | Msa0188320:intron | 50.0% | |
| !! | GTTGGAAGCTCAGCTTTAGG+TGG | + | chr2_1:3497400-3497419 | Msa0188320:intron | 50.0% |
| TAGGTGGAGTTGAACACACC+GGG | + | chr2_1:3497416-3497435 | Msa0188320:intron | 50.0% | |
| GTACGACTATGGAGGACCTT+GGG | + | chr2_1:3497443-3497462 | Msa0188320:intron | 50.0% | |
| CTATGCTCTAGTGGTGAGCA+AGG | + | chr2_1:3497468-3497487 | Msa0188320:intron | 50.0% | |
| !! | CATGAAGACGGAAGGCATTC+CGG | + | chr2_1:3497499-3497518 | Msa0188320:intron | 50.0% |
| TCCAAGGGTGATTGGATGCA+AGG | + | chr2_1:3497566-3497585 | Msa0188320:intron | 50.0% | |
| ACCTTGCATCCAATCACCCT+TGG | - | chr2_1:3497570-3497589 | None:intergenic | 50.0% | |
| CACAAGGATCTTCAAAGGGG+CGG | + | chr2_1:3497755-3497774 | Msa0188320:intron | 50.0% | |
| !! | TGTGGAGCTACTTGGTGTAG+TGG | + | chr2_1:3497816-3497835 | Msa0188320:intron | 50.0% |
| !! | GTGGAGCTACTTGGTGTAGT+GGG | + | chr2_1:3497817-3497836 | Msa0188320:intron | 50.0% |
| !! | ACTTGGTGTAGTGGGAAGCA+AGG | + | chr2_1:3497825-3497844 | Msa0188320:intron | 50.0% |
| ! | CTTGGTGTAGTGGGAAGCAA+GGG | + | chr2_1:3497826-3497845 | Msa0188320:intron | 50.0% |
| AAGCAAGGGAAAGAGCAGCA+AGG | + | chr2_1:3497840-3497859 | Msa0188320:intron | 50.0% | |
| GTACAAATCGGTGGCCGATT+TGG | + | chr2_1:3495740-3495759 | Msa0188320:intron | 50.0% | |
| !! | CGGTGGCCGATTTGGAAAAT+CGG | + | chr2_1:3495748-3495767 | Msa0188320:intron | 50.0% |
| !! | TGGCCGATTTGGAAAATCGG+TGG | + | chr2_1:3495751-3495770 | Msa0188320:intron | 50.0% |
| !!! | CGGCCACCGATTTTCCAAAT+CGG | - | chr2_1:3495757-3495776 | None:intergenic | 50.0% |
| !! | GGAAAATCGGTGGCCGATTT+TGG | + | chr2_1:3495761-3495780 | Msa0188320:intron | 50.0% |
| !!! | GCCGATTTTGGCTGCCTTTT+GGG | + | chr2_1:3495773-3495792 | Msa0188320:intron | 50.0% |
| !!! | GATTTTGGCTGCCTTTTGGG+AGG | + | chr2_1:3495776-3495795 | Msa0188320:intron | 50.0% |
| CGAACAGAAAGCCTCCCAAA+AGG | - | chr2_1:3495790-3495809 | None:intergenic | 50.0% | |
| GGAAAAATCGGTGGCCGATT+TGG | + | chr2_1:3495810-3495829 | Msa0188320:intron | 50.0% | |
| !! | CGGTGGCCGATTTGGAAAAT+CGG | + | chr2_1:3495748-3495767 | Msa0188320:intron | 50.0% |
| !! | TGGCCGATTTGGAAAATCGG+TGG | + | chr2_1:3495751-3495770 | Msa0188320:intron | 50.0% |
| !!! | CGGCCACCGATTTTCCAAAT+CGG | - | chr2_1:3495757-3495776 | None:intergenic | 50.0% |
| AGATAGAGGGGGCTGAAACA+AGG | + | chr2_1:3495956-3495975 | Msa0188320:intron | 50.0% | |
| GATAGAGGGGGCTGAAACAA+GGG | + | chr2_1:3495957-3495976 | Msa0188320:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | + | chr2_1:3496075-3496094 | Msa0188320:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | + | chr2_1:3496199-3496218 | Msa0188320:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | - | chr2_1:3496206-3496225 | None:intergenic | 50.0% | |
| TTTCCTGGTTGTCTTCCTGC+AGG | + | chr2_1:3498864-3498883 | Msa0188320:intron | 50.0% | |
| !! | GCATAGTTCTAAGCACCCTC+TGG | + | chr2_1:3498917-3498936 | Msa0188320:CDS | 50.0% |
| CAAGCTCTCGAGTTCTTGGA+GGG | - | chr2_1:3499195-3499214 | None:intergenic | 50.0% | |
| AGACCAAGCTCTCGAGTTCT+TGG | - | chr2_1:3499199-3499218 | None:intergenic | 50.0% | |
| ATCCAAAAGCTATGGCCCTG+TGG | + | chr2_1:3499708-3499727 | Msa0188320:intron | 50.0% | |
| TCCAAAAGCTATGGCCCTGT+GGG | + | chr2_1:3499709-3499728 | Msa0188320:intron | 50.0% | |
| AGGAGGGTGAATCACTGAGA+TGG | + | chr2_1:3499829-3499848 | Msa0188320:intron | 50.0% | |
| GGAGGGTGAATCACTGAGAT+GGG | + | chr2_1:3499830-3499849 | Msa0188320:intron | 50.0% | |
| TGAATCACTGAGATGGGAGG+AGG | + | chr2_1:3499836-3499855 | Msa0188320:intron | 50.0% | |
| GAATCACTGAGATGGGAGGA+GGG | + | chr2_1:3499837-3499856 | Msa0188320:intron | 50.0% | |
| CATTGCGGCATACCCATACT+TGG | - | chr2_1:3500064-3500083 | None:intergenic | 50.0% | |
| CAAGTATGGGTATGCCGCAA+TGG | + | chr2_1:3500062-3500081 | Msa0188320:CDS | 50.0% | |
| GCAAAAAGACCATCTGGCCT+TGG | + | chr2_1:3500156-3500175 | Msa0188320:CDS | 50.0% | |
| !! | AAAAGACCATCTGGCCTTGG+AGG | + | chr2_1:3500159-3500178 | Msa0188320:CDS | 50.0% |
| !! | AAAGACCATCTGGCCTTGGA+GGG | + | chr2_1:3500160-3500179 | Msa0188320:CDS | 50.0% |
| GCTTAACCCAGGGTCATGAT+TGG | + | chr2_1:3500288-3500307 | Msa0188320:intron | 50.0% | |
| CCCAGGGTCATGATTGGAAT+AGG | + | chr2_1:3500294-3500313 | Msa0188320:intron | 50.0% | |
| ACGAAGTGGCTCTTGACAGA+AGG | + | chr2_1:3500682-3500701 | Msa0188320:CDS | 50.0% | |
| GGATTGGGTGTATGGGAATG+AGG | + | chr2_1:3501009-3501028 | Msa0188320:intron | 50.0% | |
| CGCTATGCTATAGTGTCGTG+AGG | + | chr2_1:3501601-3501620 | Msa0188320:intron | 50.0% | |
| TAAATGGAGAGCTGCAGGAG+TGG | + | chr2_1:3501715-3501734 | Msa0188320:CDS | 50.0% | |
| !! | AGCGTTGATGCGATGCGATC+AGG | + | chr2_1:3494999-3495018 | Msa0188320:exon | 55.0% |
| CGGTTGTCATCCCTGCTTTG+TGG | + | chr2_1:3495437-3495456 | Msa0188320:CDS | 55.0% | |
| !!! | GGCCGATTTTGGCTGCCTTT+TGG | + | chr2_1:3495772-3495791 | Msa0188320:intron | 55.0% |
| TCTTGGTTACGGGAAGAGGC+TGG | + | chr2_1:3496079-3496098 | Msa0188320:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | + | chr2_1:3496080-3496099 | Msa0188320:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | + | chr2_1:3496086-3496105 | Msa0188320:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | + | chr2_1:3496087-3496106 | Msa0188320:intron | 55.0% | |
| TTTGACCTTTGCCCCACGGT+GGG | - | chr2_1:3496398-3496417 | None:intergenic | 55.0% | |
| !! | GAAGACCGAGATGGTGGACA+AGG | + | chr2_1:3496582-3496601 | Msa0188320:intron | 55.0% |
| GCACAAGACAATGGCACTCC+TGG | - | chr2_1:3496608-3496627 | None:intergenic | 55.0% | |
| !! | GGCATCGATGTGGGCAAAGT+TGG | + | chr2_1:3496672-3496691 | Msa0188320:intron | 55.0% |
| GGTGGAGTCAAAGGCCATCA+TGG | + | chr2_1:3496765-3496784 | Msa0188320:intron | 55.0% | |
| ! | AGAGGGAATGGTGGAGGTAG+AGG | + | chr2_1:3497039-3497058 | Msa0188320:intron | 55.0% |
| TGGTGGAGGTAGAGGTAACC+GGG | + | chr2_1:3497047-3497066 | Msa0188320:intron | 55.0% | |
| CACTCAACATCAGCCTGGAG+AGG | + | chr2_1:3497292-3497311 | Msa0188320:intron | 55.0% | |
| TCAACATCAGCCTGGAGAGG+CGG | + | chr2_1:3497295-3497314 | Msa0188320:intron | 55.0% | |
| ATTCTTACCACCGCCTCTCC+AGG | - | chr2_1:3497308-3497327 | None:intergenic | 55.0% | |
| ! | TGATCTACCGGTTGAGGTGG+AGG | + | chr2_1:3497333-3497352 | Msa0188320:intron | 55.0% |
| CCTTGAACCTCCACCTCAAC+CGG | - | chr2_1:3497343-3497362 | None:intergenic | 55.0% | |
| CTCCATAGTCGTACCACTCC+CGG | - | chr2_1:3497437-3497456 | None:intergenic | 55.0% | |
| GGTACGACTATGGAGGACCT+TGG | + | chr2_1:3497442-3497461 | Msa0188320:intron | 55.0% | |
| CCACTAGAGCATAGCACCCA+AGG | - | chr2_1:3497462-3497481 | None:intergenic | 55.0% | |
| ! | CCTTGGGTGCTATGCTCTAG+TGG | + | chr2_1:3497459-3497478 | Msa0188320:intron | 55.0% |
| GATCTTCGAGAAGGCGGAAG+AGG | + | chr2_1:3497683-3497702 | Msa0188320:intron | 55.0% | |
| CGAGAAGGCGGAAGAGGTTA+AGG | + | chr2_1:3497689-3497708 | Msa0188320:intron | 55.0% | |
| AGGATCTTCAAAGGGGCGGA+AGG | + | chr2_1:3497759-3497778 | Msa0188320:intron | 55.0% | |
| !!! | GGCCGATTTTGGCTGCCTTT+TGG | + | chr2_1:3495772-3495791 | Msa0188320:intron | 55.0% |
| TCTTGGTTACGGGAAGAGGC+TGG | + | chr2_1:3496079-3496098 | Msa0188320:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | + | chr2_1:3496080-3496099 | Msa0188320:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | + | chr2_1:3496086-3496105 | Msa0188320:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | + | chr2_1:3496087-3496106 | Msa0188320:intron | 55.0% | |
| TTCAAAAGCCGGTGCTTGGC+AGG | + | chr2_1:3498716-3498735 | Msa0188320:intron | 55.0% | |
| GCAACTATCCTGCCAAGCAC+CGG | - | chr2_1:3498727-3498746 | None:intergenic | 55.0% | |
| CCAAGCTCTCGAGTTCTTGG+AGG | - | chr2_1:3499196-3499215 | None:intergenic | 55.0% | |
| CCTCCAAGAACTCGAGAGCT+TGG | + | chr2_1:3499193-3499212 | Msa0188320:intron | 55.0% | |
| ! | ACCCACAGGGCCATAGCTTT+TGG | - | chr2_1:3499713-3499732 | None:intergenic | 55.0% |
| GGGTGAATCACTGAGATGGG+AGG | + | chr2_1:3499833-3499852 | Msa0188320:intron | 55.0% | |
| CTCGCTGAGAGACTAGGGTT+AGG | + | chr2_1:3499892-3499911 | Msa0188320:intron | 55.0% | |
| AGTGGCTCTTGACAGAAGGC+TGG | + | chr2_1:3500686-3500705 | Msa0188320:CDS | 55.0% | |
| TCTAACTGCAACTGGGTCGG+AGG | + | chr2_1:3501664-3501683 | Msa0188320:CDS | 55.0% | |
| CAACAATTGGCGCCCACCGT+GGG | + | chr2_1:3496383-3496402 | Msa0188320:intron | 60.0% | |
| AACAATTGGCGCCCACCGTG+GGG | + | chr2_1:3496384-3496403 | Msa0188320:intron | 60.0% | |
| CTTTGACCTTTGCCCCACGG+TGG | - | chr2_1:3496399-3496418 | None:intergenic | 60.0% | |
| CACCGTGGGGCAAAGGTCAA+AGG | + | chr2_1:3496397-3496416 | Msa0188320:intron | 60.0% | |
| ACCGGTCACCATGACACGAG+CGG | + | chr2_1:3496558-3496577 | Msa0188320:intron | 60.0% | |
| TCCGCTCGTGTCATGGTGAC+CGG | - | chr2_1:3496562-3496581 | None:intergenic | 60.0% | |
| GGTCTTCTCCGCTCGTGTCA+TGG | - | chr2_1:3496569-3496588 | None:intergenic | 60.0% | |
| ACGAGCGGAGAAGACCGAGA+TGG | + | chr2_1:3496573-3496592 | Msa0188320:intron | 60.0% | |
| AGCGGAGAAGACCGAGATGG+TGG | + | chr2_1:3496576-3496595 | Msa0188320:intron | 60.0% | |
| !! | CCTGGCCTTGTCCACCATCT+CGG | - | chr2_1:3496590-3496609 | None:intergenic | 60.0% |
| !! | AACCAACCGCGGCATCGATG+TGG | + | chr2_1:3496662-3496681 | Msa0188320:intron | 60.0% |
| !! | ACCAACCGCGGCATCGATGT+GGG | + | chr2_1:3496663-3496682 | Msa0188320:intron | 60.0% |
| CTTTGCCCACATCGATGCCG+CGG | - | chr2_1:3496671-3496690 | None:intergenic | 60.0% | |
| GGTGGAGGTAGAGGTAACCG+GGG | + | chr2_1:3497048-3497067 | Msa0188320:intron | 60.0% | |
| TCTACCAGGCATCACCCCCA+AGG | - | chr2_1:3497245-3497264 | None:intergenic | 60.0% | |
| CAGACGATCACCGCTCTACC+AGG | - | chr2_1:3497259-3497278 | None:intergenic | 60.0% | |
| CTGGTAGAGCGGTGATCGTC+TGG | + | chr2_1:3497257-3497276 | Msa0188320:intron | 60.0% | |
| CCGGTTGAGGTGGAGGTTCA+AGG | + | chr2_1:3497340-3497359 | Msa0188320:intron | 60.0% | |
| GGAGTTGAACACACCGGGAG+TGG | + | chr2_1:3497421-3497440 | Msa0188320:intron | 60.0% | |
| CACCGGGAGTGGTACGACTA+TGG | + | chr2_1:3497432-3497451 | Msa0188320:intron | 60.0% | |
| CGGGAGTGGTACGACTATGG+AGG | + | chr2_1:3497435-3497454 | Msa0188320:intron | 60.0% | |
| !! | GAAGACGGAAGGCATTCCGG+AGG | + | chr2_1:3497502-3497521 | Msa0188320:intron | 60.0% |
| GAGCCTGCAGGAAGACAACC+AGG | - | chr2_1:3498870-3498889 | None:intergenic | 60.0% | |
| GTTCTTGGAGGGAGAGACCC+AGG | - | chr2_1:3499184-3499203 | None:intergenic | 60.0% | |
| CCTAACCCTCCAAGGCCAGA+TGG | - | chr2_1:3500168-3500187 | None:intergenic | 60.0% | |
| !! | CCATCTGGCCTTGGAGGGTT+AGG | + | chr2_1:3500165-3500184 | Msa0188320:intron | 60.0% |
| GGAGAGCTGCAGGAGTGGAA+AGG | + | chr2_1:3501720-3501739 | Msa0188320:CDS | 60.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | + | chr2_1:3496190-3496209 | Msa0188320:intron | 65.0% | |
| GCAACAATTGGCGCCCACCG+TGG | + | chr2_1:3496382-3496401 | Msa0188320:intron | 65.0% | |
| !! | CCGAGATGGTGGACAAGGCC+AGG | + | chr2_1:3496587-3496606 | Msa0188320:intron | 65.0% |
| CTCACCTTGGGGGTGATGCC+TGG | + | chr2_1:3497238-3497257 | Msa0188320:intron | 65.0% | |
| GGGGGTGATGCCTGGTAGAG+CGG | + | chr2_1:3497246-3497265 | Msa0188320:intron | 65.0% | |
| ACATCAGCCTGGAGAGGCGG+TGG | + | chr2_1:3497298-3497317 | Msa0188320:intron | 65.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | + | chr2_1:3496190-3496209 | Msa0188320:intron | 65.0% | |
| GCCCACATCGATGCCGCGGT+TGG | - | chr2_1:3496667-3496686 | None:intergenic | 70.0% | |
| TGGCGCCCACCGTGGGGCAA+AGG | + | chr2_1:3496390-3496409 | Msa0188320:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 3494895 | 3501823 | 3494895 | ID=Msa0188320;Name=Msa0188320 |
| chr2_1 | mRNA | 3494895 | 3501823 | 3494895 | ID=Msa0188320-mRNA-1;Parent=Msa0188320;Name=Msa0188320-mRNA-1;_AED=0.19;_eAED=0.19;_QI=116|1|1|1|0.87|1|9|45|308 |
| chr2_1 | exon | 3494895 | 3495177 | 3494895 | ID=Msa0188320-mRNA-1:exon:1482;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3495420 | 3495561 | 3495420 | ID=Msa0188320-mRNA-1:exon:1483;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3498886 | 3498938 | 3498886 | ID=Msa0188320-mRNA-1:exon:1484;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3500047 | 3500181 | 3500047 | ID=Msa0188320-mRNA-1:exon:1485;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3500299 | 3500362 | 3500299 | ID=Msa0188320-mRNA-1:exon:1486;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3500499 | 3500584 | 3500499 | ID=Msa0188320-mRNA-1:exon:1487;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3500665 | 3500747 | 3500665 | ID=Msa0188320-mRNA-1:exon:1488;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3501242 | 3501318 | 3501242 | ID=Msa0188320-mRNA-1:exon:1489;Parent=Msa0188320-mRNA-1 |
| chr2_1 | exon | 3501659 | 3501823 | 3501659 | ID=Msa0188320-mRNA-1:exon:1490;Parent=Msa0188320-mRNA-1 |
| chr2_1 | five_prime_UTR | 3494895 | 3495010 | 3494895 | ID=Msa0188320-mRNA-1:five_prime_utr;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3495011 | 3495177 | 3495011 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3495420 | 3495561 | 3495420 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3498886 | 3498938 | 3498886 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3500047 | 3500181 | 3500047 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3500299 | 3500362 | 3500299 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3500499 | 3500584 | 3500499 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3500665 | 3500747 | 3500665 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3501242 | 3501318 | 3501242 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | CDS | 3501659 | 3501778 | 3501659 | ID=Msa0188320-mRNA-1:cds;Parent=Msa0188320-mRNA-1 |
| chr2_1 | three_prime_UTR | 3501779 | 3501823 | 3501779 | ID=Msa0188320-mRNA-1:three_prime_utr;Parent=Msa0188320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
