Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189340 | XP_011044295.1 | 63.128 | 179 | 48 | 2 | 2 | 180 | 9 | 169 | 2.04e-74 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189340 | sp|Q0WWE3|QCR61_ARATH | 78.261 | 69 | 15 | 0 | 112 | 180 | 1 | 69 | 2.96e-35 | 121 |
| Msa0189340 | sp|Q0WWE3|QCR61_ARATH | 85.246 | 61 | 9 | 0 | 1 | 61 | 1 | 61 | 7.42e-33 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189340 | A0A6N2KWH5 | 58.140 | 86 | 35 | 1 | 86 | 171 | 649 | 733 | 1.84e-24 | 110 |
| Msa0189340 | A0A6N2KWH5 | 61.749 | 183 | 51 | 6 | 1 | 180 | 674 | 840 | 5.03e-63 | 218 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0189340 | Msa0953310 | 0.821166 | 4.665254e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189340 | MtrunA17_Chr6g0479461 | 98.551 | 69 | 1 | 0 | 112 | 180 | 4 | 72 | 1.61e-46 | 147 |
| Msa0189340 | MtrunA17_Chr6g0479461 | 83.607 | 61 | 10 | 0 | 1 | 61 | 4 | 64 | 1.89e-34 | 116 |
| Msa0189340 | MtrunA17_Chr2g0278601 | 86.957 | 69 | 9 | 0 | 112 | 180 | 4 | 72 | 4.59e-41 | 133 |
| Msa0189340 | MtrunA17_Chr2g0278601 | 96.721 | 61 | 2 | 0 | 1 | 61 | 4 | 64 | 3.20e-39 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0189340 | AT1G15120.1 | 78.261 | 69 | 15 | 0 | 112 | 180 | 1 | 69 | 3.01e-36 | 121 |
| Msa0189340 | AT1G15120.1 | 85.246 | 61 | 9 | 0 | 1 | 61 | 1 | 61 | 7.54e-34 | 115 |
| Msa0189340 | AT1G15120.2 | 67.857 | 84 | 16 | 1 | 1 | 73 | 68 | 151 | 1.90e-34 | 119 |
| Msa0189340 | AT1G15120.2 | 61.250 | 80 | 31 | 0 | 91 | 170 | 47 | 126 | 1.08e-31 | 112 |
| Msa0189340 | AT2G01090.3 | 75.410 | 61 | 15 | 0 | 112 | 172 | 1 | 61 | 3.69e-30 | 105 |
| Msa0189340 | AT2G01090.3 | 77.049 | 61 | 14 | 0 | 1 | 61 | 1 | 61 | 1.36e-29 | 103 |
| Msa0189340 | AT2G01090.4 | 75.410 | 61 | 15 | 0 | 112 | 172 | 1 | 61 | 3.69e-30 | 105 |
| Msa0189340 | AT2G01090.4 | 77.049 | 61 | 14 | 0 | 1 | 61 | 1 | 61 | 1.36e-29 | 103 |
| Msa0189340 | AT2G01090.2 | 75.410 | 61 | 15 | 0 | 112 | 172 | 1 | 61 | 3.69e-30 | 105 |
| Msa0189340 | AT2G01090.2 | 77.049 | 61 | 14 | 0 | 1 | 61 | 1 | 61 | 1.36e-29 | 103 |
| Msa0189340 | AT2G01090.1 | 75.410 | 61 | 15 | 0 | 112 | 172 | 1 | 61 | 3.69e-30 | 105 |
| Msa0189340 | AT2G01090.1 | 77.049 | 61 | 14 | 0 | 1 | 61 | 1 | 61 | 1.36e-29 | 103 |
Find 58 sgRNAs with CRISPR-Local
Find 584 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTTTAAAAGCAGTTATT+TGG | 0.178520 | 2_1:-4757968 | None:intergenic |
| AGTAATGGTCTCACACATTT+TGG | 0.201330 | 2_1:-4751060 | None:intergenic |
| ATTAACGGTCTGACACATTT+TGG | 0.220545 | 2_1:-4755389 | None:intergenic |
| AGGATACATGGTGATGATTC+TGG | 0.240497 | 2_1:+4757719 | Msa0189340:CDS |
| ATTCACCAAACTGAAGTAAT+AGG | 0.242156 | 2_1:+4757899 | Msa0189340:exon |
| TTATACAGGCATGCATTAAA+AGG | 0.254689 | 2_1:+4752270 | Msa0189340:intron |
| AGTAATCCGGGAGAATATTT+TGG | 0.266989 | 2_1:+4752487 | Msa0189340:CDS |
| AGGATACAAGGTGATGATTC+TGG | 0.270114 | 2_1:+4752290 | Msa0189340:CDS |
| CAGACCGTTAATTGAATATC+AGG | 0.288636 | 2_1:+4755400 | Msa0189340:CDS |
| GACTCTTCGAGAAGCTTCTT+AGG | 0.307061 | 2_1:-4751030 | None:intergenic |
| ACCATACAGGGCATGAGTTT+TGG | 0.315836 | 2_1:-4758002 | None:intergenic |
| TTCAGTTTGGTGAATAGCTT+TGG | 0.329408 | 2_1:-4752465 | None:intergenic |
| TAATCAACTAAATCAAATAA+TGG | 0.358725 | 2_1:-4750516 | None:intergenic |
| ATGTTTAAAAGCAGTTATTT+GGG | 0.379418 | 2_1:-4757967 | None:intergenic |
| TCTCCCCTATTACTTCAGTT+TGG | 0.387199 | 2_1:-4757904 | None:intergenic |
| CAAACCTGATATTCAATTAA+CGG | 0.405138 | 2_1:-4755404 | None:intergenic |
| AGAAGCTTCTTAGGATCAAC+AGG | 0.405674 | 2_1:-4751021 | None:intergenic |
| TTCAGTTTGGTGAATAACTT+TGG | 0.409826 | 2_1:-4757891 | None:intergenic |
| TTCACCAAACTGAAGTAATA+GGG | 0.417659 | 2_1:+4757900 | Msa0189340:exon |
| TTCACCAAACTGAAGTAATC+CGG | 0.426112 | 2_1:+4752474 | Msa0189340:CDS |
| TGCTACAGGCATGCATGAAA+AGG | 0.434844 | 2_1:+4757699 | Msa0189340:intron |
| TCTCCCGGATTACTTCAGTT+TGG | 0.446126 | 2_1:-4752478 | None:intergenic |
| AATCAAATAATGGATCGATT+AGG | 0.459335 | 2_1:-4750506 | None:intergenic |
| AATGAGCAAAATAACCATAC+AGG | 0.462993 | 2_1:-4758015 | None:intergenic |
| GGATACAAGGTGATGATTCT+GGG | 0.470418 | 2_1:+4752291 | Msa0189340:CDS |
| GGATACATGGTGATGATTCT+GGG | 0.470418 | 2_1:+4757720 | Msa0189340:CDS |
| GGTATTGCAGAATCGTAACT+TGG | 0.476493 | 2_1:-4755113 | None:intergenic |
| ACCAAAACTCATGCCCTGTA+TGG | 0.479255 | 2_1:+4758001 | Msa0189340:three_prime_UTR |
| GCGGTGGTTGTCGTTTCGTG+TGG | 0.513133 | 2_1:-4750560 | None:intergenic |
| AGAGATGAGGTGGTAGGCGG+TGG | 0.533134 | 2_1:-4750576 | None:intergenic |
| GAAGTTGCAGAGAGATGAGG+TGG | 0.533700 | 2_1:-4750586 | None:intergenic |
| CGGTGGTTGTCGTTTCGTGT+GGG | 0.536298 | 2_1:-4750559 | None:intergenic |
| ATAATACCAAAATATTCTCC+CGG | 0.536530 | 2_1:-4752493 | None:intergenic |
| TCACCAAACTGAAGTAATCC+GGG | 0.544406 | 2_1:+4752475 | Msa0189340:CDS |
| CACACCTGGTATTCAAGTAA+TGG | 0.546486 | 2_1:-4751075 | None:intergenic |
| TCTGGGCAGAAACACTGCAC+TGG | 0.555865 | 2_1:+4752308 | Msa0189340:CDS |
| TCTGGGCAGAAACACTGCAC+TGG | 0.555865 | 2_1:+4757737 | Msa0189340:CDS |
| AGAGAAGTTGCAGAGAGATG+AGG | 0.560358 | 2_1:-4750589 | None:intergenic |
| ATAATCATCCAATGTCTCCA+TGG | 0.564607 | 2_1:-4758052 | None:intergenic |
| TAATCATCCAATGTCTCCAT+GGG | 0.576748 | 2_1:-4758051 | None:intergenic |
| ATAAATAGCGGTGCTCATGA+AGG | 0.581404 | 2_1:-4758110 | None:intergenic |
| AGCGGTGCTCATGAAGGAAG+TGG | 0.582465 | 2_1:-4758104 | None:intergenic |
| TCACCAAACTGAAGTAATAG+GGG | 0.596486 | 2_1:+4757901 | Msa0189340:exon |
| AGTAATAGGGGAGAATGTGT+TGG | 0.599428 | 2_1:+4757913 | Msa0189340:exon |
| GTTTATTTCGTAATAAATAG+CGG | 0.600735 | 2_1:-4758122 | None:intergenic |
| TTGCAGAGAGATGAGGTGGT+AGG | 0.601036 | 2_1:-4750582 | None:intergenic |
| GAGACCATTACTTGAATACC+AGG | 0.602600 | 2_1:+4751071 | Msa0189340:CDS |
| TTGATGATGTTGTTTCGTTG+TGG | 0.604598 | 2_1:-4755134 | None:intergenic |
| GGAATGAAGATAAAACAGAA+TGG | 0.604767 | 2_1:-4757946 | None:intergenic |
| GCATGCATGAAAAGGATACA+TGG | 0.611275 | 2_1:+4757707 | Msa0189340:CDS |
| GCATGCATTAAAAGGATACA+AGG | 0.618377 | 2_1:+4752278 | Msa0189340:CDS |
| GAATGAATTCAGGGCTGATG+AGG | 0.622779 | 2_1:+4755325 | Msa0189340:intron |
| TTGTGAATTCAGGGCTGACG+AGG | 0.633885 | 2_1:+4750996 | Msa0189340:intron |
| ATGAGCAAAATAACCATACA+GGG | 0.639914 | 2_1:-4758014 | None:intergenic |
| GTATTGCAGAATCGTAACTT+GGG | 0.642087 | 2_1:-4755112 | None:intergenic |
| CAGAGAGATGAGGTGGTAGG+CGG | 0.665211 | 2_1:-4750579 | None:intergenic |
| GTTGGTGCGCGAGCGATGAG+AGG | 0.675420 | 2_1:-4755167 | None:intergenic |
| GATTAGAAATCACGACTGCG+CGG | 0.677815 | 2_1:+4750534 | Msa0189340:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATTAAAATTAAAAA+TGG | - | chr2_1:4756770-4756789 | None:intergenic | 0.0% |
| !!! | AATTGCTATTTTTTTTAATA+GGG | - | chr2_1:4753833-4753852 | None:intergenic | 10.0% |
| !!! | AAATTGCTATTTTTTTTAAT+AGG | - | chr2_1:4753834-4753853 | None:intergenic | 10.0% |
| !!! | ATTAAAAAAAATAGCAATTT+TGG | + | chr2_1:4753834-4753853 | Msa0189340:intron | 10.0% |
| !!! | TTTTAAATATTTCAAAAAGT+AGG | - | chr2_1:4754151-4754170 | None:intergenic | 10.0% |
| !!! | CATATTTTTCTTTTTTTTTT+TGG | - | chr2_1:4755526-4755545 | None:intergenic | 10.0% |
| !! | AAAAAAAAGAAAAATATGAT+CGG | + | chr2_1:4755528-4755547 | Msa0189340:intron | 10.0% |
| !!! | TAATTTGTTTATTAAAAATC+TGG | + | chr2_1:4756211-4756230 | Msa0189340:intron | 10.0% |
| !!! | AATTTGTTTATTAAAAATCT+GGG | + | chr2_1:4756212-4756231 | Msa0189340:intron | 10.0% |
| !! | AAAAAAAATAAAATCAAAAC+TGG | + | chr2_1:4756803-4756822 | Msa0189340:intron | 10.0% |
| !! | ACTATATATATATACTTAAA+TGG | + | chr2_1:4756920-4756939 | Msa0189340:intron | 10.0% |
| !! | CTATATATATATACTTAAAT+GGG | + | chr2_1:4756921-4756940 | Msa0189340:intron | 10.0% |
| !!! | TAATTACATTATTTTGAATT+TGG | + | chr2_1:4758078-4758097 | Msa0189340:three_prime_UTR | 10.0% |
| !! | TAATCAACTAAATCAAATAA+TGG | - | chr2_1:4750519-4750538 | None:intergenic | 15.0% |
| !! | AGATTTAAACAACATTTAAT+CGG | - | chr2_1:4750753-4750772 | None:intergenic | 15.0% |
| !!! | AATTAAACTCATTTTTTTAC+AGG | + | chr2_1:4751332-4751351 | Msa0189340:intron | 15.0% |
| !! | TAAAATGTACAAATGTAAAA+GGG | - | chr2_1:4751422-4751441 | None:intergenic | 15.0% |
| !! | ATAAAATGTACAAATGTAAA+AGG | - | chr2_1:4751423-4751442 | None:intergenic | 15.0% |
| !!! | TACATTTGTACATTTTATTA+TGG | + | chr2_1:4751425-4751444 | Msa0189340:intron | 15.0% |
| !! | ATAAATAAAATGAAGCAATT+TGG | + | chr2_1:4751537-4751556 | Msa0189340:intron | 15.0% |
| !!! | TGAATAAAAGTTTATTTTAG+CGG | + | chr2_1:4752002-4752021 | Msa0189340:intron | 15.0% |
| !!! | TTTTTATTCTAAATTTGTCA+TGG | - | chr2_1:4752174-4752193 | None:intergenic | 15.0% |
| !! | TTAATACTCTAAATTTATAC+AGG | + | chr2_1:4752256-4752275 | Msa0189340:intron | 15.0% |
| !!! | ATGGTTTTTATTTTTCTTAT+TGG | + | chr2_1:4752594-4752613 | Msa0189340:intron | 15.0% |
| !!! | TGGTTTTTATTTTTCTTATT+GGG | + | chr2_1:4752595-4752614 | Msa0189340:intron | 15.0% |
| !! | CAAAAAACTTATTATTACAA+GGG | - | chr2_1:4752891-4752910 | None:intergenic | 15.0% |
| !! | ACAAAAAACTTATTATTACA+AGG | - | chr2_1:4752892-4752911 | None:intergenic | 15.0% |
| !! | AAAAATTCTACATAAATGAA+AGG | - | chr2_1:4753100-4753119 | None:intergenic | 15.0% |
| !!! | ATTGCTATTTTTTTTAATAG+GGG | - | chr2_1:4753832-4753851 | None:intergenic | 15.0% |
| !!! | TTTTGCCATTTTTTTTAATA+GGG | + | chr2_1:4754008-4754027 | Msa0189340:intron | 15.0% |
| !!! | TGTAAATAGTCTTATAATTA+AGG | - | chr2_1:4754199-4754218 | None:intergenic | 15.0% |
| !!! | AATACATCTATTTTTTTTAG+AGG | - | chr2_1:4754249-4754268 | None:intergenic | 15.0% |
| !! | TACTTAATACAAATATTCAT+TGG | - | chr2_1:4754547-4754566 | None:intergenic | 15.0% |
| !!! | TTCATAATATGTTTATGTTT+TGG | - | chr2_1:4754616-4754635 | None:intergenic | 15.0% |
| !!! | ATAGATTGATATTTTTCTAT+TGG | + | chr2_1:4754653-4754672 | Msa0189340:intron | 15.0% |
| !! | AAAAAGTTATAACTAAAAAG+TGG | + | chr2_1:4754892-4754911 | Msa0189340:intron | 15.0% |
| !! | ATAAATACTATATTCTTTCA+AGG | - | chr2_1:4754980-4754999 | None:intergenic | 15.0% |
| !!! | TGAATATTATTTTATGTAAG+TGG | + | chr2_1:4755839-4755858 | Msa0189340:intron | 15.0% |
| !!! | ATGTACATATTTGATTTATT+TGG | + | chr2_1:4757249-4757268 | Msa0189340:intron | 15.0% |
| !!! | TGTACATATTTGATTTATTT+GGG | + | chr2_1:4757250-4757269 | Msa0189340:intron | 15.0% |
| !!! | TCTTTATTTTATATTAGTCT+AGG | - | chr2_1:4757600-4757619 | None:intergenic | 15.0% |
| !! | TTCTTTCATAAACAAAAATA+AGG | - | chr2_1:4757649-4757668 | None:intergenic | 15.0% |
| !! | TGCAAGATTATAATTTATTA+GGG | - | chr2_1:4757859-4757878 | None:intergenic | 15.0% |
| !! | TTGCAAGATTATAATTTATT+AGG | - | chr2_1:4757860-4757879 | None:intergenic | 15.0% |
| !! | AAACCCTAGATTTAAAAATT+GGG | - | chr2_1:4750718-4750737 | None:intergenic | 20.0% |
| !! | AAAACCCTAGATTTAAAAAT+TGG | - | chr2_1:4750719-4750738 | None:intergenic | 20.0% |
| !! | GATTTAGTGAATATTAATCT+AGG | + | chr2_1:4750816-4750835 | Msa0189340:intron | 20.0% |
| !! | AAGAGTTATGAATTCTTATA+AGG | + | chr2_1:4750957-4750976 | Msa0189340:intron | 20.0% |
| !! | TGATAGTTATGATTGATTAA+CGG | - | chr2_1:4751237-4751256 | None:intergenic | 20.0% |
| !!! | AATCTAAAATCTAAATCACT+CGG | - | chr2_1:4751622-4751641 | None:intergenic | 20.0% |
| !!! | AAACTTTTATTCAACAAAGT+TGG | - | chr2_1:4751995-4752014 | None:intergenic | 20.0% |
| !!! | GAATAAAAGTTTATTTTAGC+GGG | + | chr2_1:4752003-4752022 | Msa0189340:intron | 20.0% |
| !!! | AATAAAAGTTTATTTTAGCG+GGG | + | chr2_1:4752004-4752023 | Msa0189340:intron | 20.0% |
| !!! | TTTAGAATAAAAACAAGTGT+TGG | + | chr2_1:4752181-4752200 | Msa0189340:intron | 20.0% |
| !! | TTCTTTCAAAAACAAAAAGA+AGG | - | chr2_1:4752220-4752239 | None:intergenic | 20.0% |
| !! | AGAAAAATAAAAACCATACA+GGG | - | chr2_1:4752591-4752610 | None:intergenic | 20.0% |
| !! | AAGAAAAATAAAAACCATAC+AGG | - | chr2_1:4752592-4752611 | None:intergenic | 20.0% |
| !! | GTGATAATTAATAATGTGTT+TGG | + | chr2_1:4752641-4752660 | Msa0189340:intron | 20.0% |
| !! | AAAGATTGCCTTTATAAATA+GGG | - | chr2_1:4753000-4753019 | None:intergenic | 20.0% |
| !! | AAAAGATTGCCTTTATAAAT+AGG | - | chr2_1:4753001-4753020 | None:intergenic | 20.0% |
| !! | ACAGATTGCATTTATAAAAT+GGG | + | chr2_1:4753518-4753537 | Msa0189340:intron | 20.0% |
| !!! | ATAAAGAAGGGTATATTTTA+GGG | - | chr2_1:4753600-4753619 | None:intergenic | 20.0% |
| !!! | TATAAAGAAGGGTATATTTT+AGG | - | chr2_1:4753601-4753620 | None:intergenic | 20.0% |
| !!! | TTGCTATTTTTTTTAATAGG+GGG | - | chr2_1:4753831-4753850 | None:intergenic | 20.0% |
| !! | TTTACAAAAAGTTGCAATTA+TGG | - | chr2_1:4753912-4753931 | None:intergenic | 20.0% |
| !!! | CTTTTGCCATTTTTTTTAAT+AGG | + | chr2_1:4754007-4754026 | Msa0189340:intron | 20.0% |
| !!! | TTTGCCATTTTTTTTAATAG+GGG | + | chr2_1:4754009-4754028 | Msa0189340:intron | 20.0% |
| !!! | TTAGATAGGTATTAGATTTT+TGG | - | chr2_1:4754084-4754103 | None:intergenic | 20.0% |
| !!! | AAAAACTTTTCTTAACACAA+AGG | + | chr2_1:4754415-4754434 | Msa0189340:intron | 20.0% |
| !!! | TTAAGTTGTAATCAATCAAT+AGG | - | chr2_1:4754477-4754496 | None:intergenic | 20.0% |
| !! | CAGAAAAAATATCATACAAT+TGG | - | chr2_1:4754593-4754612 | None:intergenic | 20.0% |
| !!! | ATTGATATTTTTCTATTGGA+CGG | + | chr2_1:4754657-4754676 | Msa0189340:intron | 20.0% |
| !! | ATATTTAGAAATGAAGAAGT+AGG | + | chr2_1:4755017-4755036 | Msa0189340:intron | 20.0% |
| !!! | TCCATTTCAATTTTAAATCT+AGG | + | chr2_1:4755235-4755254 | Msa0189340:intron | 20.0% |
| !!! | CCATTTCAATTTTAAATCTA+GGG | + | chr2_1:4755236-4755255 | Msa0189340:intron | 20.0% |
| !!! | GGAGAATTTTATATTCATAA+GGG | + | chr2_1:4755549-4755568 | Msa0189340:intron | 20.0% |
| !! | TAAATCAAATATGTACATGT+TGG | - | chr2_1:4757247-4757266 | None:intergenic | 20.0% |
| !!! | TTGTCTTATCTTACATTTTT+AGG | + | chr2_1:4757531-4757550 | Msa0189340:intron | 20.0% |
| !! | TTTCATAAACAAAAATAAGG+CGG | - | chr2_1:4757646-4757665 | None:intergenic | 20.0% |
| !! | ATGTTTAAAAGCAGTTATTT+GGG | - | chr2_1:4757970-4757989 | None:intergenic | 20.0% |
| !! | GTTTATTTCGTAATAAATAG+CGG | - | chr2_1:4758125-4758144 | None:intergenic | 20.0% |
| !!! | AATCAAATAATGGATCGATT+AGG | - | chr2_1:4750509-4750528 | None:intergenic | 25.0% |
| ! | TTCGAATCGAATATAAATAG+TGG | - | chr2_1:4750676-4750695 | None:intergenic | 25.0% |
| !! | TTTCCCCAATTTTTAAATCT+AGG | + | chr2_1:4750711-4750730 | Msa0189340:intron | 25.0% |
| !! | TTCCCCAATTTTTAAATCTA+GGG | + | chr2_1:4750712-4750731 | Msa0189340:intron | 25.0% |
| ! | AACCCTAGATTTAAAAATTG+GGG | - | chr2_1:4750717-4750736 | None:intergenic | 25.0% |
| ! | AAAGCATATACACTTTAAAC+AGG | - | chr2_1:4750881-4750900 | None:intergenic | 25.0% |
| ! | AATTCTTATAAGGTCATGTT+TGG | + | chr2_1:4750967-4750986 | Msa0189340:intron | 25.0% |
| !! | TTAATTTTCATGCACAGTTA+GGG | - | chr2_1:4751318-4751337 | None:intergenic | 25.0% |
| !!! | TTTAATTTTCATGCACAGTT+AGG | - | chr2_1:4751319-4751338 | None:intergenic | 25.0% |
| ! | TTTAAGAATTCATAGCAGAT+AGG | + | chr2_1:4751355-4751374 | Msa0189340:intron | 25.0% |
| !! | AGAATTTTATGAAAGGAACT+TGG | + | chr2_1:4751477-4751496 | Msa0189340:intron | 25.0% |
| !! | TAGATTTTAGATTGAATGAG+TGG | + | chr2_1:4751629-4751648 | Msa0189340:intron | 25.0% |
| !!! | ATAAAAGTTTATTTTAGCGG+GGG | + | chr2_1:4752005-4752024 | Msa0189340:intron | 25.0% |
| ! | TTTCAAAAACAAAAAGAAGG+TGG | - | chr2_1:4752217-4752236 | None:intergenic | 25.0% |
| !!! | CTGGACAATATTTTGATTAT+TGG | + | chr2_1:4752327-4752346 | Msa0189340:CDS | 25.0% |
| ! | TTGCAAGATTATGATTTATC+AGG | - | chr2_1:4752434-4752453 | None:intergenic | 25.0% |
| ! | ATAATACCAAAATATTCTCC+CGG | - | chr2_1:4752496-4752515 | None:intergenic | 25.0% |
| ! | TTCAAACTTGACAAAAAACT+TGG | - | chr2_1:4752684-4752703 | None:intergenic | 25.0% |
| ! | TCAAGTTTGAAAAATGTGTT+TGG | + | chr2_1:4752693-4752712 | Msa0189340:intron | 25.0% |
| ! | TTGAAAAATGTGTTTGGAAA+CGG | + | chr2_1:4752699-4752718 | Msa0189340:intron | 25.0% |
| !! | CTAAGGTGATTCAAATTTTT+GGG | + | chr2_1:4752848-4752867 | Msa0189340:intron | 25.0% |
| ! | TTTAAATGCAATCTTTAAGC+TGG | + | chr2_1:4752925-4752944 | Msa0189340:intron | 25.0% |
| ! | GTTTGAATAGCATAATGATA+TGG | + | chr2_1:4752947-4752966 | Msa0189340:intron | 25.0% |
| ! | CAACACGAATATTAACAAAA+AGG | - | chr2_1:4753063-4753082 | None:intergenic | 25.0% |
| !!! | TGATAAAACTAAAAGCACTA+GGG | - | chr2_1:4753323-4753342 | None:intergenic | 25.0% |
| ! | TTTCTTACTTCATATCATCT+TGG | - | chr2_1:4753414-4753433 | None:intergenic | 25.0% |
| ! | AAGAAATCCTGCATAAATAA+AGG | + | chr2_1:4753428-4753447 | Msa0189340:intron | 25.0% |
| ! | AGAAATCCTGCATAAATAAA+GGG | + | chr2_1:4753429-4753448 | Msa0189340:intron | 25.0% |
| ! | CACAGATTGCATTTATAAAA+TGG | + | chr2_1:4753517-4753536 | Msa0189340:intron | 25.0% |
| ! | AACTAAGCCTAAAAAAATCT+AGG | + | chr2_1:4753759-4753778 | Msa0189340:intron | 25.0% |
| !!! | ACTTTAGCCTAGATTTTTTT+AGG | - | chr2_1:4753769-4753788 | None:intergenic | 25.0% |
| !! | TGCAACTTTTTGTAAAGATA+AGG | + | chr2_1:4753916-4753935 | Msa0189340:intron | 25.0% |
| !! | GCAACTTTTTGTAAAGATAA+GGG | + | chr2_1:4753917-4753936 | Msa0189340:intron | 25.0% |
| !! | CAACTTTTTGTAAAGATAAG+GGG | + | chr2_1:4753918-4753937 | Msa0189340:intron | 25.0% |
| ! | AAACATATTTCCCTTATGTT+AGG | + | chr2_1:4753946-4753965 | Msa0189340:intron | 25.0% |
| ! | AACATATTTCCCTTATGTTA+GGG | + | chr2_1:4753947-4753966 | Msa0189340:intron | 25.0% |
| !!! | TTGCCATTTTTTTTAATAGG+GGG | + | chr2_1:4754010-4754029 | Msa0189340:intron | 25.0% |
| ! | CAAAACAAAAAAAAGAGAGT+AGG | - | chr2_1:4754109-4754128 | None:intergenic | 25.0% |
| ! | GTCTTATAATTAAGGATAGA+GGG | - | chr2_1:4754191-4754210 | None:intergenic | 25.0% |
| !! | AGTCTTATAATTAAGGATAG+AGG | - | chr2_1:4754192-4754211 | None:intergenic | 25.0% |
| ! | ATAAAATCCCCCTAAATATA+AGG | + | chr2_1:4754222-4754241 | Msa0189340:intron | 25.0% |
| ! | TTTAGAGGACCTTATATTTA+GGG | - | chr2_1:4754234-4754253 | None:intergenic | 25.0% |
| !!! | TTTTAGAGGACCTTATATTT+AGG | - | chr2_1:4754235-4754254 | None:intergenic | 25.0% |
| !!! | AATTAGTTTTGTTCGTCATA+TGG | - | chr2_1:4754500-4754519 | None:intergenic | 25.0% |
| ! | GCAAAACAATATCAGTATAA+TGG | - | chr2_1:4754783-4754802 | None:intergenic | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | + | chr2_1:4754859-4754878 | Msa0189340:intron | 25.0% |
| !! | CCCTAGATTTAAAATTGAAA+TGG | - | chr2_1:4755239-4755258 | None:intergenic | 25.0% |
| !!! | TAAATCTAGGGTTTTCAATT+TGG | + | chr2_1:4755248-4755267 | Msa0189340:intron | 25.0% |
| ! | TTAATCTGAGTCGTTAATTT+GGG | - | chr2_1:4755284-4755303 | None:intergenic | 25.0% |
| !! | ATTTTATCGTGAATGAATTC+AGG | + | chr2_1:4755315-4755334 | Msa0189340:intron | 25.0% |
| !! | TTTTATCGTGAATGAATTCA+GGG | + | chr2_1:4755316-4755335 | Msa0189340:intron | 25.0% |
| ! | CAAACCTGATATTCAATTAA+CGG | - | chr2_1:4755407-4755426 | None:intergenic | 25.0% |
| !! | CGGAGAATTTTATATTCATA+AGG | + | chr2_1:4755548-4755567 | Msa0189340:intron | 25.0% |
| ! | AAAATTGTCATAGACCAAAT+TGG | - | chr2_1:4755720-4755739 | None:intergenic | 25.0% |
| !! | TTTTGTCTGAGAGTAAAATT+GGG | - | chr2_1:4755750-4755769 | None:intergenic | 25.0% |
| !! | TTTTTGTCTGAGAGTAAAAT+TGG | - | chr2_1:4755751-4755770 | None:intergenic | 25.0% |
| !! | GCCTTACTATCATAATTTTT+GGG | + | chr2_1:4755989-4756008 | Msa0189340:intron | 25.0% |
| !!! | TCATAATTTTTGGGCTATTT+TGG | + | chr2_1:4755998-4756017 | Msa0189340:intron | 25.0% |
| !!! | TGGATTTTTTTTTGGTTCAT+TGG | - | chr2_1:4756057-4756076 | None:intergenic | 25.0% |
| !! | TTGTTGTTGAGATAAAACAA+GGG | - | chr2_1:4756285-4756304 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTGAGATAAAACA+AGG | - | chr2_1:4756286-4756305 | None:intergenic | 25.0% |
| !!! | AAAATTAAAAATGGTGTTGC+AGG | - | chr2_1:4756761-4756780 | None:intergenic | 25.0% |
| ! | TACTTAAATGGGAAATAATC+TGG | + | chr2_1:4756932-4756951 | Msa0189340:intron | 25.0% |
| !! | GAGATTATGTTAGATTTTTG+TGG | + | chr2_1:4757032-4757051 | Msa0189340:intron | 25.0% |
| !! | TTTTACACTATTATTGTGAC+TGG | - | chr2_1:4757214-4757233 | None:intergenic | 25.0% |
| !!! | AATTGAGGTTAATTTTAGCA+GGG | + | chr2_1:4757320-4757339 | Msa0189340:intron | 25.0% |
| ! | CAACATTGTATGAAATTAGT+GGG | + | chr2_1:4757385-4757404 | Msa0189340:intron | 25.0% |
| !!! | CTGGACAATATTTTGATTAT+TGG | + | chr2_1:4752327-4752346 | Msa0189340:CDS | 25.0% |
| ! | AAATTATAATCTTGCAATGC+AGG | + | chr2_1:4757863-4757882 | Msa0189340:intron | 25.0% |
| ! | CATGTTTAAAAGCAGTTATT+TGG | - | chr2_1:4757971-4757990 | None:intergenic | 25.0% |
| !! | CGAATATAAATAGTGGATGA+AGG | - | chr2_1:4750669-4750688 | None:intergenic | 30.0% |
| AACAACATTTAATCGGAGTA+AGG | - | chr2_1:4750746-4750765 | None:intergenic | 30.0% | |
| TTGGATATTGTTGTGAATTC+AGG | + | chr2_1:4750986-4751005 | Msa0189340:intron | 30.0% | |
| TGGATATTGTTGTGAATTCA+GGG | + | chr2_1:4750987-4751006 | Msa0189340:intron | 30.0% | |
| AATAATAAAATCCACACACC+TGG | - | chr2_1:4751092-4751111 | None:intergenic | 30.0% | |
| TGTTTACTGAAAAATGCGAT+CGG | + | chr2_1:4751454-4751473 | Msa0189340:intron | 30.0% | |
| ! | TTTTATGAAAGGAACTTGGA+AGG | + | chr2_1:4751481-4751500 | Msa0189340:intron | 30.0% |
| TTTATGAAAGGAACTTGGAA+GGG | + | chr2_1:4751482-4751501 | Msa0189340:intron | 30.0% | |
| CACTTAAAAGTTAGTTAGAC+TGG | - | chr2_1:4751706-4751725 | None:intergenic | 30.0% | |
| ! | AGTATTTTGTGAGGGATTTT+AGG | + | chr2_1:4751799-4751818 | Msa0189340:intron | 30.0% |
| !! | GTTATATTGATTTCCTCACT+TGG | - | chr2_1:4751833-4751852 | None:intergenic | 30.0% |
| GGAAATCAATATAACAATGC+AGG | + | chr2_1:4751838-4751857 | Msa0189340:intron | 30.0% | |
| AATCAATATAACAATGCAGG+TGG | + | chr2_1:4751841-4751860 | Msa0189340:intron | 30.0% | |
| TGTATCAAAATCCATTGTGT+AGG | - | chr2_1:4751912-4751931 | None:intergenic | 30.0% | |
| !! | ATGGATTTTGATACAAACCA+AGG | + | chr2_1:4751917-4751936 | Msa0189340:intron | 30.0% |
| AAAAATGAATATTGAGGCCT+TGG | - | chr2_1:4751937-4751956 | None:intergenic | 30.0% | |
| ! | AAGGCCTCAATATTCATTTT+TGG | + | chr2_1:4751936-4751955 | Msa0189340:intron | 30.0% |
| !! | AGGCCTCAATATTCATTTTT+GGG | + | chr2_1:4751937-4751956 | Msa0189340:intron | 30.0% |
| TTATACAGGCATGCATTAAA+AGG | + | chr2_1:4752270-4752289 | Msa0189340:intron | 30.0% | |
| AAATCATAATCTTGCAATGC+AGG | + | chr2_1:4752437-4752456 | Msa0189340:intron | 30.0% | |
| CATGTTTAGGAGTAGTTATT+TGG | - | chr2_1:4752545-4752564 | None:intergenic | 30.0% | |
| GGTTACAAAATCACATGTTT+AGG | - | chr2_1:4752558-4752577 | None:intergenic | 30.0% | |
| TGAAAAATGTGTTTGGAAAC+GGG | + | chr2_1:4752700-4752719 | Msa0189340:intron | 30.0% | |
| AGACAGACTATAAATCCAAA+AGG | - | chr2_1:4752726-4752745 | None:intergenic | 30.0% | |
| ! | CATGGAATAATTTTGTCTTG+AGG | + | chr2_1:4752819-4752838 | Msa0189340:intron | 30.0% |
| AAAATTTGAATCACCTTAGC+AGG | - | chr2_1:4752847-4752866 | None:intergenic | 30.0% | |
| ! | GCTAAGGTGATTCAAATTTT+TGG | + | chr2_1:4752847-4752866 | Msa0189340:intron | 30.0% |
| ! | TAACTATGTTGTTTGCACTA+GGG | - | chr2_1:4753234-4753253 | None:intergenic | 30.0% |
| ! | ATAACTATGTTGTTTGCACT+AGG | - | chr2_1:4753235-4753254 | None:intergenic | 30.0% |
| !! | CTGATAAAACTAAAAGCACT+AGG | - | chr2_1:4753324-4753343 | None:intergenic | 30.0% |
| !!! | TGCTTTTAGTTTTATCAGCA+GGG | + | chr2_1:4753326-4753345 | Msa0189340:intron | 30.0% |
| ! | TACGTAGTGACTATTTTGTT+TGG | - | chr2_1:4753365-4753384 | None:intergenic | 30.0% |
| TTACTTCATATCATCTTGGA+TGG | - | chr2_1:4753410-4753429 | None:intergenic | 30.0% | |
| ! | CTTTATCCCTTTATTTATGC+AGG | - | chr2_1:4753438-4753457 | None:intergenic | 30.0% |
| GTGTGCTTGATTATAAAGAA+GGG | - | chr2_1:4753612-4753631 | None:intergenic | 30.0% | |
| TTTATAATCAAGCACACCAA+CGG | + | chr2_1:4753615-4753634 | Msa0189340:intron | 30.0% | |
| !!! | ATTTTAAGTTTAGAGCTGGA+GGG | - | chr2_1:4753649-4753668 | None:intergenic | 30.0% |
| AATCAAAAGTTTCGTGTACA+AGG | - | chr2_1:4753674-4753693 | None:intergenic | 30.0% | |
| ! | AATCGCAACATTTTCAAACT+CGG | - | chr2_1:4753804-4753823 | None:intergenic | 30.0% |
| ! | GTTTGAAAATGTTGCGATTT+TGG | + | chr2_1:4753805-4753824 | Msa0189340:intron | 30.0% |
| ACATATTTCCCTTATGTTAG+GGG | + | chr2_1:4753948-4753967 | Msa0189340:intron | 30.0% | |
| ! | GTTTCAAAATGTTGCGATTT+TGG | - | chr2_1:4754036-4754055 | None:intergenic | 30.0% |
| !!! | ATCGCAACATTTTGAAACTT+AGG | + | chr2_1:4754038-4754057 | Msa0189340:intron | 30.0% |
| TTAGAGGACCTTATATTTAG+GGG | - | chr2_1:4754233-4754252 | None:intergenic | 30.0% | |
| AATCTATTACGTCATACAAC+GGG | - | chr2_1:4754640-4754659 | None:intergenic | 30.0% | |
| CAATCTATTACGTCATACAA+CGG | - | chr2_1:4754641-4754660 | None:intergenic | 30.0% | |
| ! | TTTTGCTAGAAGACATATGA+AGG | + | chr2_1:4754797-4754816 | Msa0189340:intron | 30.0% |
| ACGCCTTCATAAAAATTAGT+TGG | - | chr2_1:4754865-4754884 | None:intergenic | 30.0% | |
| ! | TTTTGCATGAATATCCATGA+AGG | - | chr2_1:4754957-4754976 | None:intergenic | 30.0% |
| TTAGAAATGAAGAAGTAGGA+TGG | + | chr2_1:4755021-4755040 | Msa0189340:intron | 30.0% | |
| GTTAATCTGAGTCGTTAATT+TGG | - | chr2_1:4755285-4755304 | None:intergenic | 30.0% | |
| AAAAATCTCTTCTGATCAAC+AGG | - | chr2_1:4755353-4755372 | None:intergenic | 30.0% | |
| AATTCAATGTAATGTAGCGA+AGG | + | chr2_1:4755614-4755633 | Msa0189340:intron | 30.0% | |
| !!! | GTAATGTTTTAGGAATCATC+TGG | + | chr2_1:4755636-4755655 | Msa0189340:intron | 30.0% |
| TCCAGAATTTGAAAATGTCA+GGG | - | chr2_1:4755790-4755809 | None:intergenic | 30.0% | |
| ATCCAGAATTTGAAAATGTC+AGG | - | chr2_1:4755791-4755810 | None:intergenic | 30.0% | |
| ATAAATTAGTCCCTTTGTCT+GGG | + | chr2_1:4755809-4755828 | Msa0189340:intron | 30.0% | |
| TCAAATTAATCCCAGACAAA+GGG | - | chr2_1:4755822-4755841 | None:intergenic | 30.0% | |
| TTCAAATTAATCCCAGACAA+AGG | - | chr2_1:4755823-4755842 | None:intergenic | 30.0% | |
| ! | ATTCCCTCAATATTTTCTCA+CGG | - | chr2_1:4755875-4755894 | None:intergenic | 30.0% |
| AGGGAATAATTTGAAAATGC+AGG | + | chr2_1:4755888-4755907 | Msa0189340:intron | 30.0% | |
| AATTTGAAAATGCAGGTAGA+TGG | + | chr2_1:4755895-4755914 | Msa0189340:intron | 30.0% | |
| ! | GAGTGTTTTCTATATTCTGT+TGG | + | chr2_1:4755933-4755952 | Msa0189340:intron | 30.0% |
| AATGGAACGTGATATAAACA+AGG | + | chr2_1:4755967-4755986 | Msa0189340:intron | 30.0% | |
| ! | GGCCTTACTATCATAATTTT+TGG | + | chr2_1:4755988-4756007 | Msa0189340:intron | 30.0% |
| GCCCAAAAATTATGATAGTA+AGG | - | chr2_1:4755993-4756012 | None:intergenic | 30.0% | |
| ! | TTTGGTTCATTGGATTTATC+CGG | - | chr2_1:4756047-4756066 | None:intergenic | 30.0% |
| !!! | TTTCGGGTTGGATTTTTTTT+TGG | - | chr2_1:4756065-4756084 | None:intergenic | 30.0% |
| ! | ATGAACAACGAGTAATTTTC+GGG | - | chr2_1:4756081-4756100 | None:intergenic | 30.0% |
| ! | GATGAACAACGAGTAATTTT+CGG | - | chr2_1:4756082-4756101 | None:intergenic | 30.0% |
| GAAAATTACTCGTTGTTCAT+CGG | + | chr2_1:4756081-4756100 | Msa0189340:intron | 30.0% | |
| ! | CAATCTTACTTGGTTCTTTA+CGG | - | chr2_1:4756124-4756143 | None:intergenic | 30.0% |
| ATTATCAATAGCATAGTACC+CGG | - | chr2_1:4756195-4756214 | None:intergenic | 30.0% | |
| GAGATAAAACAAGGGTTTAA+CGG | - | chr2_1:4756277-4756296 | None:intergenic | 30.0% | |
| TTAGTTGTTCTATTCTGTCT+TGG | + | chr2_1:4756502-4756521 | Msa0189340:intron | 30.0% | |
| !!! | TAGTAGAAAGTGGGTTTTTT+GGG | + | chr2_1:4756556-4756575 | Msa0189340:intron | 30.0% |
| ACTTAAAAACTACAGCAAAG+TGG | + | chr2_1:4756670-4756689 | Msa0189340:intron | 30.0% | |
| AAATGGGAAATAATCTGGTA+TGG | + | chr2_1:4756937-4756956 | Msa0189340:intron | 30.0% | |
| ! | CAAATATGTACATGTTGGTT+TGG | - | chr2_1:4757242-4757261 | None:intergenic | 30.0% |
| ! | TTGATTTATTTGGGTTTCCT+AGG | + | chr2_1:4757259-4757278 | Msa0189340:intron | 30.0% |
| !! | GAATTGAGGTTAATTTTAGC+AGG | + | chr2_1:4757319-4757338 | Msa0189340:intron | 30.0% |
| !! | ATTGAGGTTAATTTTAGCAG+GGG | + | chr2_1:4757321-4757340 | Msa0189340:intron | 30.0% |
| CCACTAATTTCATACAATGT+TGG | - | chr2_1:4757387-4757406 | None:intergenic | 30.0% | |
| CCAACATTGTATGAAATTAG+TGG | + | chr2_1:4757384-4757403 | Msa0189340:intron | 30.0% | |
| TCCATTTATACACTAACTCA+GGG | - | chr2_1:4757448-4757467 | None:intergenic | 30.0% | |
| AATAAAGAGAAGCTCTATTG+CGG | + | chr2_1:4757469-4757488 | Msa0189340:intron | 30.0% | |
| GTAATTCTCTAAATTGCTAC+AGG | + | chr2_1:4757685-4757704 | Msa0189340:intron | 30.0% | |
| GAGAAAATCAAGTAGCTAAA+TGG | - | chr2_1:4757829-4757848 | None:intergenic | 30.0% | |
| ! | TTCAGTTTGGTGAATAACTT+TGG | - | chr2_1:4757894-4757913 | None:intergenic | 30.0% |
| ATTCACCAAACTGAAGTAAT+AGG | + | chr2_1:4752473-4752492 | Msa0189340:CDS | 30.0% | |
| TTCACCAAACTGAAGTAATA+GGG | + | chr2_1:4757900-4757919 | Msa0189340:exon | 30.0% | |
| GGAATGAAGATAAAACAGAA+TGG | - | chr2_1:4757949-4757968 | None:intergenic | 30.0% | |
| ATGAGCAAAATAACCATACA+GGG | - | chr2_1:4758017-4758036 | None:intergenic | 30.0% | |
| AATGAGCAAAATAACCATAC+AGG | - | chr2_1:4758018-4758037 | None:intergenic | 30.0% | |
| !! | TGTATGGTTATTTTGCTCAT+TGG | + | chr2_1:4758017-4758036 | Msa0189340:three_prime_UTR | 30.0% |
| !! | GTATGGTTATTTTGCTCATT+GGG | + | chr2_1:4758018-4758037 | Msa0189340:three_prime_UTR | 30.0% |
| ! | AAGCTTTGATACATACATGG+CGG | - | chr2_1:4750622-4750641 | None:intergenic | 35.0% |
| ! | GAGAAGCTTTGATACATACA+TGG | - | chr2_1:4750625-4750644 | None:intergenic | 35.0% |
| ! | AGTAATGGTCTCACACATTT+TGG | - | chr2_1:4751063-4751082 | None:intergenic | 35.0% |
| ! | CGATCGGAGAATTTTATGAA+AGG | + | chr2_1:4751470-4751489 | Msa0189340:intron | 35.0% |
| AAAATGAAGCAATTTGGCGT+AGG | + | chr2_1:4751543-4751562 | Msa0189340:intron | 35.0% | |
| CGTAGGAAATCTTTGATTGT+TGG | + | chr2_1:4751560-4751579 | Msa0189340:intron | 35.0% | |
| AGGAAATCTTTGATTGTTGG+AGG | + | chr2_1:4751563-4751582 | Msa0189340:intron | 35.0% | |
| GAAAGAAGAGCAATATGCAT+CGG | - | chr2_1:4751742-4751761 | None:intergenic | 35.0% | |
| ! | TTCTGCTGTAGTATTTTGTG+AGG | + | chr2_1:4751790-4751809 | Msa0189340:intron | 35.0% |
| ! | TCTGCTGTAGTATTTTGTGA+GGG | + | chr2_1:4751791-4751810 | Msa0189340:intron | 35.0% |
| AATATAACAATGCAGGTGGA+TGG | + | chr2_1:4751845-4751864 | Msa0189340:intron | 35.0% | |
| ATAGAAAAGACTCACTCTCA+TGG | - | chr2_1:4751878-4751897 | None:intergenic | 35.0% | |
| !! | GGCCTCAATATTCATTTTTG+GGG | + | chr2_1:4751938-4751957 | Msa0189340:intron | 35.0% |
| TGCCCCAAAAATGAATATTG+AGG | - | chr2_1:4751943-4751962 | None:intergenic | 35.0% | |
| CCACTAACGTAATACAATGT+TGG | - | chr2_1:4752080-4752099 | None:intergenic | 35.0% | |
| CCAACATTGTATTACGTTAG+TGG | + | chr2_1:4752077-4752096 | Msa0189340:intron | 35.0% | |
| GCATGCATTAAAAGGATACA+AGG | + | chr2_1:4752278-4752297 | Msa0189340:CDS | 35.0% | |
| ! | TTCAGTTTGGTGAATAGCTT+TGG | - | chr2_1:4752468-4752487 | None:intergenic | 35.0% |
| TTCACCAAACTGAAGTAATC+CGG | + | chr2_1:4752474-4752493 | Msa0189340:CDS | 35.0% | |
| ! | AGTAATCCGGGAGAATATTT+TGG | + | chr2_1:4752487-4752506 | Msa0189340:CDS | 35.0% |
| !! | ATTGGGAAATTTTGATCCCA+TGG | + | chr2_1:4752612-4752631 | Msa0189340:intron | 35.0% |
| !! | AAATTTTGATCCCATGGAGT+TGG | + | chr2_1:4752618-4752637 | Msa0189340:intron | 35.0% |
| !! | AATTTTGATCCCATGGAGTT+GGG | + | chr2_1:4752619-4752638 | Msa0189340:intron | 35.0% |
| TAATTATCACCCAACTCCAT+GGG | - | chr2_1:4752631-4752650 | None:intergenic | 35.0% | |
| TTAATTATCACCCAACTCCA+TGG | - | chr2_1:4752632-4752651 | None:intergenic | 35.0% | |
| ! | TAATGTGTTTGGAAGTATGC+TGG | + | chr2_1:4752652-4752671 | Msa0189340:intron | 35.0% |
| AATTCAACAAATGACTGCCA+CGG | - | chr2_1:4752759-4752778 | None:intergenic | 35.0% | |
| TCAGTCATTCACAAAACAAG+CGG | - | chr2_1:4752782-4752801 | None:intergenic | 35.0% | |
| TGAATGACTGAACTGAGTAT+CGG | + | chr2_1:4752791-4752810 | Msa0189340:intron | 35.0% | |
| AGCATAATGATATGGCCATT+TGG | + | chr2_1:4752955-4752974 | Msa0189340:intron | 35.0% | |
| GCATAATGATATGGCCATTT+GGG | + | chr2_1:4752956-4752975 | Msa0189340:intron | 35.0% | |
| CATAATGATATGGCCATTTG+GGG | + | chr2_1:4752957-4752976 | Msa0189340:intron | 35.0% | |
| GCGTTTAGCCCTATTTATAA+AGG | + | chr2_1:4752989-4753008 | Msa0189340:intron | 35.0% | |
| !!! | GTGCTTTTAGTTTTATCAGC+AGG | + | chr2_1:4753325-4753344 | Msa0189340:intron | 35.0% |
| !!! | TTAGTTTTATCAGCAGGGAA+AGG | + | chr2_1:4753331-4753350 | Msa0189340:intron | 35.0% |
| ! | CAAAAGCATGCAGATACTAT+AGG | + | chr2_1:4753472-4753491 | Msa0189340:intron | 35.0% |
| GTTTGATACCTTGAAAGAGA+AGG | + | chr2_1:4753557-4753576 | Msa0189340:intron | 35.0% | |
| !! | TATATTTTAGGGAGAGGAGT+TGG | - | chr2_1:4753589-4753608 | None:intergenic | 35.0% |
| GGTGTGCTTGATTATAAAGA+AGG | - | chr2_1:4753613-4753632 | None:intergenic | 35.0% | |
| TTATAATCAAGCACACCAAC+GGG | + | chr2_1:4753616-4753635 | Msa0189340:intron | 35.0% | |
| !!! | TTTTAAGTTTAGAGCTGGAG+GGG | - | chr2_1:4753648-4753667 | None:intergenic | 35.0% |
| !!! | GATTTTAAGTTTAGAGCTGG+AGG | - | chr2_1:4753650-4753669 | None:intergenic | 35.0% |
| !!! | GGAGATTTTAAGTTTAGAGC+TGG | - | chr2_1:4753653-4753672 | None:intergenic | 35.0% |
| ! | ATCGCAACATTTTCAAACTC+GGG | - | chr2_1:4753803-4753822 | None:intergenic | 35.0% |
| CATATTTCCCTTATGTTAGG+GGG | + | chr2_1:4753949-4753968 | Msa0189340:intron | 35.0% | |
| TGGCCCCCTATTAAAAAAAA+TGG | - | chr2_1:4753825-4753844 | None:intergenic | 35.0% | |
| !!! | GCAACATTTTGAAACTTAGG+AGG | + | chr2_1:4754041-4754060 | Msa0189340:intron | 35.0% |
| AAAGAGAGTAGGTGTTAGAT+AGG | - | chr2_1:4754098-4754117 | None:intergenic | 35.0% | |
| TAGAGGACCTTATATTTAGG+GGG | - | chr2_1:4754232-4754251 | None:intergenic | 35.0% | |
| ATGTACACTCAAGCTAACAA+CGG | + | chr2_1:4754719-4754738 | Msa0189340:intron | 35.0% | |
| GTATTGCAGAATCGTAACTT+GGG | - | chr2_1:4755115-4755134 | None:intergenic | 35.0% | |
| !! | TTGATGATGTTGTTTCGTTG+TGG | - | chr2_1:4755137-4755156 | None:intergenic | 35.0% |
| !! | AAGCTTTGAGACATACATGT+TGG | - | chr2_1:4755188-4755207 | None:intergenic | 35.0% |
| ! | ATTAACGGTCTGACACATTT+TGG | - | chr2_1:4755392-4755411 | None:intergenic | 35.0% |
| CAGACCGTTAATTGAATATC+AGG | + | chr2_1:4755400-4755419 | Msa0189340:CDS | 35.0% | |
| AGGGAGTTATAGTAGCATTA+AGG | + | chr2_1:4755568-4755587 | Msa0189340:intron | 35.0% | |
| ! | TGTAGCGAAGGTAATGTTTT+AGG | + | chr2_1:4755626-4755645 | Msa0189340:intron | 35.0% |
| ! | GGTCTATGACAATTTTGTTG+CGG | + | chr2_1:4755724-4755743 | Msa0189340:intron | 35.0% |
| ! | TCCCTGACATTTTCAAATTC+TGG | + | chr2_1:4755786-4755805 | Msa0189340:intron | 35.0% |
| GATAAATTAGTCCCTTTGTC+TGG | + | chr2_1:4755808-4755827 | Msa0189340:intron | 35.0% | |
| TGAACCGTGAGAAAATATTG+AGG | + | chr2_1:4755868-4755887 | Msa0189340:intron | 35.0% | |
| GAACCGTGAGAAAATATTGA+GGG | + | chr2_1:4755869-4755888 | Msa0189340:intron | 35.0% | |
| CTGTTGGAAATCTGACTTAA+TGG | + | chr2_1:4755949-4755968 | Msa0189340:intron | 35.0% | |
| CGTAAAGAACCAAGTAAGAT+TGG | + | chr2_1:4756122-4756141 | Msa0189340:intron | 35.0% | |
| AACTAAGTTGTAACAAAGCG+TGG | - | chr2_1:4756488-4756507 | None:intergenic | 35.0% | |
| TTGTTCTATTCTGTCTTGGA+TGG | + | chr2_1:4756506-4756525 | Msa0189340:intron | 35.0% | |
| TGTTCTATTCTGTCTTGGAT+GGG | + | chr2_1:4756507-4756526 | Msa0189340:intron | 35.0% | |
| !!! | GTAGTAGAAAGTGGGTTTTT+TGG | + | chr2_1:4756555-4756574 | Msa0189340:intron | 35.0% |
| !!! | AGTAGAAAGTGGGTTTTTTG+GGG | + | chr2_1:4756557-4756576 | Msa0189340:intron | 35.0% |
| CGGATCTAGACAATAGATAT+TGG | + | chr2_1:4756594-4756613 | Msa0189340:intron | 35.0% | |
| CTAGACAATAGATATTGGTG+TGG | + | chr2_1:4756599-4756618 | Msa0189340:intron | 35.0% | |
| AAAACTACAGCAAAGTGGTT+TGG | + | chr2_1:4756675-4756694 | Msa0189340:intron | 35.0% | |
| AAACTACAGCAAAGTGGTTT+GGG | + | chr2_1:4756676-4756695 | Msa0189340:intron | 35.0% | |
| GCATTATACCATGGAGTTAA+AGG | + | chr2_1:4756704-4756723 | Msa0189340:intron | 35.0% | |
| !! | TTAAAAATGGTGTTGCAGGA+GGG | - | chr2_1:4756757-4756776 | None:intergenic | 35.0% |
| !! | ATTAAAAATGGTGTTGCAGG+AGG | - | chr2_1:4756758-4756777 | None:intergenic | 35.0% |
| !!! | GAAATTTGGCTTTTGGATGT+CGG | + | chr2_1:4757010-4757029 | Msa0189340:intron | 35.0% |
| ! | TCTCTATTTCTCTCTGGTTT+GGG | + | chr2_1:4757062-4757081 | Msa0189340:intron | 35.0% |
| AATACGGGTTCATTAGGTTT+AGG | - | chr2_1:4757167-4757186 | None:intergenic | 35.0% | |
| TGATGAAATACGGGTTCATT+AGG | - | chr2_1:4757173-4757192 | None:intergenic | 35.0% | |
| TAATGAACCCGTATTTCATC+AGG | + | chr2_1:4757172-4757191 | Msa0189340:intron | 35.0% | |
| AAGCTAACCTGATGAAATAC+GGG | - | chr2_1:4757182-4757201 | None:intergenic | 35.0% | |
| CAAGCTAACCTGATGAAATA+CGG | - | chr2_1:4757183-4757202 | None:intergenic | 35.0% | |
| ! | ATTTGGGTTTCCTAGGTATA+TGG | + | chr2_1:4757266-4757285 | Msa0189340:intron | 35.0% |
| TCTCAACTCAAAAAAGGGAA+GGG | - | chr2_1:4757361-4757380 | None:intergenic | 35.0% | |
| GGTTCTCTCAACTCAAAAAA+GGG | - | chr2_1:4757366-4757385 | None:intergenic | 35.0% | |
| TGGTTCTCTCAACTCAAAAA+AGG | - | chr2_1:4757367-4757386 | None:intergenic | 35.0% | |
| ACCCTGAGTTAGTGTATAAA+TGG | + | chr2_1:4757444-4757463 | Msa0189340:intron | 35.0% | |
| GTCCATTTATACACTAACTC+AGG | - | chr2_1:4757449-4757468 | None:intergenic | 35.0% | |
| ATAAAGAGAAGCTCTATTGC+GGG | + | chr2_1:4757470-4757489 | Msa0189340:intron | 35.0% | |
| TTGCTATCTTGTGATTTGAG+TGG | - | chr2_1:4757563-4757582 | None:intergenic | 35.0% | |
| TCACCAAACTGAAGTAATAG+GGG | + | chr2_1:4757901-4757920 | Msa0189340:exon | 35.0% | |
| !! | ATTGGGAAATTTTGATCCCA+TGG | + | chr2_1:4752612-4752631 | Msa0189340:intron | 35.0% |
| TAATCATCCAATGTCTCCAT+GGG | - | chr2_1:4758054-4758073 | None:intergenic | 35.0% | |
| ATAATCATCCAATGTCTCCA+TGG | - | chr2_1:4758055-4758074 | None:intergenic | 35.0% | |
| AGAAGCTTCTTAGGATCAAC+AGG | - | chr2_1:4751024-4751043 | None:intergenic | 40.0% | |
| GAGACCATTACTTGAATACC+AGG | + | chr2_1:4751071-4751090 | Msa0189340:CDS | 40.0% | |
| CACACCTGGTATTCAAGTAA+TGG | - | chr2_1:4751078-4751097 | None:intergenic | 40.0% | |
| TTACTTGAATACCAGGTGTG+TGG | + | chr2_1:4751078-4751097 | Msa0189340:intron | 40.0% | |
| !! | TAGCAGATAGGCGTTTTTAG+TGG | + | chr2_1:4751367-4751386 | Msa0189340:intron | 40.0% |
| !!! | AGCAGATAGGCGTTTTTAGT+GGG | + | chr2_1:4751368-4751387 | Msa0189340:intron | 40.0% |
| !! | AGGGAGTACTAGTAAGGATA+AGG | + | chr2_1:4751501-4751520 | Msa0189340:intron | 40.0% |
| TGATTGTTGGAGGAGTTATC+TGG | + | chr2_1:4751573-4751592 | Msa0189340:intron | 40.0% | |
| TAGATTGAATGAGTGGCTAC+TGG | + | chr2_1:4751636-4751655 | Msa0189340:intron | 40.0% | |
| ! | AGCAATATGCATCGGCATAA+AGG | - | chr2_1:4751734-4751753 | None:intergenic | 40.0% |
| TTAGGATTCTGTTCCAAGTG+AGG | + | chr2_1:4751817-4751836 | Msa0189340:intron | 40.0% | |
| ! | CTGTTTGAGATCCTACACAA+TGG | + | chr2_1:4751898-4751917 | Msa0189340:intron | 40.0% |
| !!! | TATTCATTTTTGGGGCATGC+AGG | + | chr2_1:4751946-4751965 | Msa0189340:intron | 40.0% |
| TCTCAGCTCAAAAGAAGGAA+GGG | - | chr2_1:4752046-4752065 | None:intergenic | 40.0% | |
| ATTTGTCATGGCGCATCAAT+AGG | - | chr2_1:4752162-4752181 | None:intergenic | 40.0% | |
| AGGATACAAGGTGATGATTC+TGG | + | chr2_1:4752290-4752309 | Msa0189340:CDS | 40.0% | |
| GGATACAAGGTGATGATTCT+GGG | + | chr2_1:4752291-4752310 | Msa0189340:CDS | 40.0% | |
| CAGCAAATGAAGTGGATCAA+TGG | - | chr2_1:4752404-4752423 | None:intergenic | 40.0% | |
| GCATACAACAGCAAATGAAG+TGG | - | chr2_1:4752412-4752431 | None:intergenic | 40.0% | |
| TCACCAAACTGAAGTAATCC+GGG | + | chr2_1:4752475-4752494 | Msa0189340:CDS | 40.0% | |
| ATTCAACAAATGACTGCCAC+GGG | - | chr2_1:4752758-4752777 | None:intergenic | 40.0% | |
| GAATGACTGAACTGAGTATC+GGG | + | chr2_1:4752792-4752811 | Msa0189340:intron | 40.0% | |
| ! | AATGACTGAACTGAGTATCG+GGG | + | chr2_1:4752793-4752812 | Msa0189340:intron | 40.0% |
| TGCACTAGGGTGTGTATAAT+GGG | - | chr2_1:4753221-4753240 | None:intergenic | 40.0% | |
| TTGCACTAGGGTGTGTATAA+TGG | - | chr2_1:4753222-4753241 | None:intergenic | 40.0% | |
| AGCACTAGGGTGTGTATAAT+GGG | - | chr2_1:4753310-4753329 | None:intergenic | 40.0% | |
| AAGCACTAGGGTGTGTATAA+TGG | - | chr2_1:4753311-4753330 | None:intergenic | 40.0% | |
| !! | GAAGGGTATATTTTAGGGAG+AGG | - | chr2_1:4753595-4753614 | None:intergenic | 40.0% |
| ! | TTTAAGTTTAGAGCTGGAGG+GGG | - | chr2_1:4753647-4753666 | None:intergenic | 40.0% |
| ! | TCGCAACATTTTCAAACTCG+GGG | - | chr2_1:4753802-4753821 | None:intergenic | 40.0% |
| !! | TCTCAGCAATTTTTGGACGA+AGG | - | chr2_1:4753863-4753882 | None:intergenic | 40.0% |
| ! | GGCATCTTCTCAGCAATTTT+TGG | - | chr2_1:4753870-4753889 | None:intergenic | 40.0% |
| !!! | GCAATTATGGCCCCTTTTTT+GGG | - | chr2_1:4753899-4753918 | None:intergenic | 40.0% |
| !!! | TGCAATTATGGCCCCTTTTT+TGG | - | chr2_1:4753900-4753919 | None:intergenic | 40.0% |
| ! | CTTTTGACCCCCTAACATAA+GGG | - | chr2_1:4753959-4753978 | None:intergenic | 40.0% |
| ! | TCTTTTGACCCCCTAACATA+AGG | - | chr2_1:4753960-4753979 | None:intergenic | 40.0% |
| CATATTTCCCTAAACGTGAG+AGG | + | chr2_1:4753981-4754000 | Msa0189340:intron | 40.0% | |
| AAAGTGACCTCTCACGTTTA+GGG | - | chr2_1:4753991-4754010 | None:intergenic | 40.0% | |
| AAAAGTGACCTCTCACGTTT+AGG | - | chr2_1:4753992-4754011 | None:intergenic | 40.0% | |
| ! | AGCAAGCTGATTTAGTCGTA+AGG | - | chr2_1:4754760-4754779 | None:intergenic | 40.0% |
| AAAGTGGAAATCACACCTTG+AGG | + | chr2_1:4754908-4754927 | Msa0189340:intron | 40.0% | |
| GTTGCTAAAAGACACCTTCA+TGG | + | chr2_1:4754940-4754959 | Msa0189340:intron | 40.0% | |
| TCGATCGGGTTTCTCTATTT+CGG | - | chr2_1:4755053-4755072 | None:intergenic | 40.0% | |
| AGTCTGTCTCCTATTCCATT+CGG | - | chr2_1:4755078-4755097 | None:intergenic | 40.0% | |
| GGTATTGCAGAATCGTAACT+TGG | - | chr2_1:4755116-4755135 | None:intergenic | 40.0% | |
| ! | CTGAGTCGTTAATTTGGGAT+CGG | - | chr2_1:4755279-4755298 | None:intergenic | 40.0% |
| ! | ATGTTGTTTGTAGCTGAGCT+CGG | - | chr2_1:4755691-4755710 | None:intergenic | 40.0% |
| CTCAGCTACAAACAACATGA+CGG | + | chr2_1:4755693-4755712 | Msa0189340:intron | 40.0% | |
| AACAACATGACGGTCCAATT+TGG | + | chr2_1:4755703-4755722 | Msa0189340:intron | 40.0% | |
| !! | GAAAATGTCAGGGACTAGTT+TGG | - | chr2_1:4755780-4755799 | None:intergenic | 40.0% |
| !!! | TTTTTGGGCTATTTTGGAGC+AGG | + | chr2_1:4756004-4756023 | Msa0189340:intron | 40.0% |
| !!! | ACAACGAGTAATTTTCGGGT+TGG | - | chr2_1:4756077-4756096 | None:intergenic | 40.0% |
| ! | TTACTCGTTGTTCATCGGTT+TGG | + | chr2_1:4756086-4756105 | Msa0189340:intron | 40.0% |
| !! | TACTCGTTGTTCATCGGTTT+GGG | + | chr2_1:4756087-4756106 | Msa0189340:intron | 40.0% |
| ! | GAACCAAGTAAGATTGGTTC+CGG | + | chr2_1:4756128-4756147 | Msa0189340:intron | 40.0% |
| !! | GTTTAACGGAGTAATGGACT+GGG | - | chr2_1:4756263-4756282 | None:intergenic | 40.0% |
| ACAAGGGTTTAACGGAGTAA+TGG | - | chr2_1:4756269-4756288 | None:intergenic | 40.0% | |
| GCTTGTGAGTAGTAGAAAGT+GGG | + | chr2_1:4756547-4756566 | Msa0189340:intron | 40.0% | |
| GAATCGAACCTTTAACTCCA+TGG | - | chr2_1:4756715-4756734 | None:intergenic | 40.0% | |
| !! | GGGTTAAAAATGGTGTTGCA+GGG | - | chr2_1:4756737-4756756 | None:intergenic | 40.0% |
| !! | AGGGTTAAAAATGGTGTTGC+AGG | - | chr2_1:4756738-4756757 | None:intergenic | 40.0% |
| TGTTGCAGGAGGGTTAAAAA+TGG | - | chr2_1:4756747-4756766 | None:intergenic | 40.0% | |
| ! | AAGTTTCTTCGTTAGCCTAG+CGG | - | chr2_1:4756881-4756900 | None:intergenic | 40.0% |
| ATACAGTGTGAAACATGGTG+TGG | - | chr2_1:4756969-4756988 | None:intergenic | 40.0% | |
| ! | CTCTTCTCTCTATTTCTCTC+TGG | + | chr2_1:4757056-4757075 | Msa0189340:intron | 40.0% |
| ! | CTCTCTATTTCTCTCTGGTT+TGG | + | chr2_1:4757061-4757080 | Msa0189340:intron | 40.0% |
| CAGTAGAGAGGTTGAGTTAT+GGG | + | chr2_1:4757092-4757111 | Msa0189340:intron | 40.0% | |
| AGTAGAGAGGTTGAGTTATG+GGG | + | chr2_1:4757093-4757112 | Msa0189340:intron | 40.0% | |
| GTTCATTAGGTTTAGGTGGT+CGG | - | chr2_1:4757160-4757179 | None:intergenic | 40.0% | |
| ! | CGTATTTCATCAGGTTAGCT+TGG | + | chr2_1:4757181-4757200 | Msa0189340:intron | 40.0% |
| !! | TTCATCAGGTTAGCTTGGTT+CGG | + | chr2_1:4757186-4757205 | Msa0189340:intron | 40.0% |
| ATCAGCTGTGTGTTGAATTG+AGG | + | chr2_1:4757305-4757324 | Msa0189340:intron | 40.0% | |
| CTCAACTCAAAAAAGGGAAG+GGG | - | chr2_1:4757360-4757379 | None:intergenic | 40.0% | |
| CTCTCAACTCAAAAAAGGGA+AGG | - | chr2_1:4757362-4757381 | None:intergenic | 40.0% | |
| GAAATTAGTGGGAAAACCGT+AGG | + | chr2_1:4757396-4757415 | Msa0189340:intron | 40.0% | |
| GCTAAACAAGTCAGAACCTA+CGG | - | chr2_1:4757415-4757434 | None:intergenic | 40.0% | |
| ACCTGCAATAGACACACATT+GGG | - | chr2_1:4757512-4757531 | None:intergenic | 40.0% | |
| AACCTGCAATAGACACACAT+TGG | - | chr2_1:4757513-4757532 | None:intergenic | 40.0% | |
| ! | ATTAGTCTAGGCGCAACAAT+TGG | - | chr2_1:4757588-4757607 | None:intergenic | 40.0% |
| GCATGCATGAAAAGGATACA+TGG | + | chr2_1:4757707-4757726 | Msa0189340:CDS | 40.0% | |
| ! | AGGATACATGGTGATGATTC+TGG | + | chr2_1:4757719-4757738 | Msa0189340:CDS | 40.0% |
| ! | GGATACATGGTGATGATTCT+GGG | + | chr2_1:4757720-4757739 | Msa0189340:CDS | 40.0% |
| TCTCCCCTATTACTTCAGTT+TGG | - | chr2_1:4757907-4757926 | None:intergenic | 40.0% | |
| AGTAATAGGGGAGAATGTGT+TGG | + | chr2_1:4757913-4757932 | Msa0189340:exon | 40.0% | |
| ! | TTTTGATCCCATGGAGACAT+TGG | + | chr2_1:4758044-4758063 | Msa0189340:three_prime_UTR | 40.0% |
| ATAAATAGCGGTGCTCATGA+AGG | - | chr2_1:4758113-4758132 | None:intergenic | 40.0% | |
| GATTAGAAATCACGACTGCG+CGG | + | chr2_1:4750534-4750553 | Msa0189340:five_prime_UTR | 45.0% | |
| AGAGAAGTTGCAGAGAGATG+AGG | - | chr2_1:4750592-4750611 | None:intergenic | 45.0% | |
| GACTCTTCGAGAAGCTTCTT+AGG | - | chr2_1:4751033-4751052 | None:intergenic | 45.0% | |
| !! | CTTGGAAGGGAGTACTAGTA+AGG | + | chr2_1:4751495-4751514 | Msa0189340:intron | 45.0% |
| !!! | TTTTTGGGGCATGCAGGAAT+AGG | + | chr2_1:4751952-4751971 | Msa0189340:intron | 45.0% |
| !!! | TTTTGGGGCATGCAGGAATA+GGG | + | chr2_1:4751953-4751972 | Msa0189340:intron | 45.0% |
| GGAATAGGGTAGAGAGATCA+CGG | + | chr2_1:4751967-4751986 | Msa0189340:intron | 45.0% | |
| AGAAGGAAGGGGGATATAAG+AGG | - | chr2_1:4752034-4752053 | None:intergenic | 45.0% | |
| TCAGCTCAAAAGAAGGAAGG+GGG | - | chr2_1:4752044-4752063 | None:intergenic | 45.0% | |
| CTCAGCTCAAAAGAAGGAAG+GGG | - | chr2_1:4752045-4752064 | None:intergenic | 45.0% | |
| GTCTCAGCTCAAAAGAAGGA+AGG | - | chr2_1:4752047-4752066 | None:intergenic | 45.0% | |
| CGAAGTCTCAGCTCAAAAGA+AGG | - | chr2_1:4752051-4752070 | None:intergenic | 45.0% | |
| CAATAGGAGTTGCTATCGTG+TGG | - | chr2_1:4752146-4752165 | None:intergenic | 45.0% | |
| TCTCCCGGATTACTTCAGTT+TGG | - | chr2_1:4752481-4752500 | None:intergenic | 45.0% | |
| ACCAAAACTCATGCCCTGTA+TGG | + | chr2_1:4752575-4752594 | Msa0189340:intron | 45.0% | |
| ! | ACCATACAGGGCATGAGTTT+TGG | - | chr2_1:4752579-4752598 | None:intergenic | 45.0% |
| !! | AACTGAGTATCGGGGATTCA+TGG | + | chr2_1:4752801-4752820 | Msa0189340:intron | 45.0% |
| TTGTCTTGAGGTTCCTGCTA+AGG | + | chr2_1:4752831-4752850 | Msa0189340:intron | 45.0% | |
| ! | TGGCCATTTGGGGTCATTAA+TGG | + | chr2_1:4752967-4752986 | Msa0189340:intron | 45.0% |
| ACGCCATTAATGACCCCAAA+TGG | - | chr2_1:4752973-4752992 | None:intergenic | 45.0% | |
| !! | AATCTGTGCTGATTTGCAGG+TGG | - | chr2_1:4753505-4753524 | None:intergenic | 45.0% |
| !! | TGCAATCTGTGCTGATTTGC+AGG | - | chr2_1:4753508-4753527 | None:intergenic | 45.0% |
| GGAGTAGACCTTCTCTTTCA+AGG | - | chr2_1:4753568-4753587 | None:intergenic | 45.0% | |
| !! | CAGCAATTTTTGGACGAAGG+AGG | - | chr2_1:4753860-4753879 | None:intergenic | 45.0% |
| ATGCCACGTGTCCCAAAAAA+GGG | + | chr2_1:4753885-4753904 | Msa0189340:intron | 45.0% | |
| TGGAAATCACACCTTGAGGT+AGG | + | chr2_1:4754912-4754931 | Msa0189340:intron | 45.0% | |
| CGATCGGGTTTCTCTATTTC+GGG | - | chr2_1:4755052-4755071 | None:intergenic | 45.0% | |
| ! | TATTCCATTCGGGTTCGATC+GGG | - | chr2_1:4755067-4755086 | None:intergenic | 45.0% |
| ! | CTATTCCATTCGGGTTCGAT+CGG | - | chr2_1:4755068-4755087 | None:intergenic | 45.0% |
| GTCTGTCTCCTATTCCATTC+GGG | - | chr2_1:4755077-4755096 | None:intergenic | 45.0% | |
| GAATGAATTCAGGGCTGATG+AGG | + | chr2_1:4755325-4755344 | Msa0189340:intron | 45.0% | |
| TCACCGGAACCAATCTTACT+TGG | - | chr2_1:4756134-4756153 | None:intergenic | 45.0% | |
| ! | TAAGATTGGTTCCGGTGACA+GGG | + | chr2_1:4756136-4756155 | Msa0189340:intron | 45.0% |
| !! | ATGGACTGGGTCACGATAAT+AGG | - | chr2_1:4756250-4756269 | None:intergenic | 45.0% |
| !! | GGTTTAACGGAGTAATGGAC+TGG | - | chr2_1:4756264-4756283 | None:intergenic | 45.0% |
| ACGATGAGAAGAGAAGACTG+GGG | - | chr2_1:4756317-4756336 | None:intergenic | 45.0% | |
| GACGATGAGAAGAGAAGACT+GGG | - | chr2_1:4756318-4756337 | None:intergenic | 45.0% | |
| AGACGATGAGAAGAGAAGAC+TGG | - | chr2_1:4756319-4756338 | None:intergenic | 45.0% | |
| TCTATTCTGTCTTGGATGGG+TGG | + | chr2_1:4756510-4756529 | Msa0189340:intron | 45.0% | |
| GGCTTGTGAGTAGTAGAAAG+TGG | + | chr2_1:4756546-4756565 | Msa0189340:intron | 45.0% | |
| !!! | GAAAGTGGGTTTTTTGGGGA+CGG | + | chr2_1:4756561-4756580 | Msa0189340:intron | 45.0% |
| !! | TGGGTGAGAGCATTATACCA+TGG | + | chr2_1:4756695-4756714 | Msa0189340:intron | 45.0% |
| !!! | GGTGGTGGAAATTTGGCTTT+TGG | + | chr2_1:4757003-4757022 | Msa0189340:intron | 45.0% |
| TTGGGATAGATGCAGTAGAG+AGG | + | chr2_1:4757080-4757099 | Msa0189340:intron | 45.0% | |
| GCAGTAGAGAGGTTGAGTTA+TGG | + | chr2_1:4757091-4757110 | Msa0189340:intron | 45.0% | |
| ACGGGTTCATTAGGTTTAGG+TGG | - | chr2_1:4757164-4757183 | None:intergenic | 45.0% | |
| !! | TCATCAGGTTAGCTTGGTTC+GGG | + | chr2_1:4757187-4757206 | Msa0189340:intron | 45.0% |
| GGGTTTCCTAGGTATATGGA+TGG | + | chr2_1:4757270-4757289 | Msa0189340:intron | 45.0% | |
| GTCTCTCCATCCATATACCT+AGG | - | chr2_1:4757279-4757298 | None:intergenic | 45.0% | |
| GTATATGGATGGAGAGACGA+TGG | + | chr2_1:4757281-4757300 | Msa0189340:intron | 45.0% | |
| TGCTACAGGCATGCATGAAA+AGG | + | chr2_1:4757699-4757718 | Msa0189340:intron | 45.0% | |
| ACCAAAACTCATGCCCTGTA+TGG | + | chr2_1:4752575-4752594 | Msa0189340:intron | 45.0% | |
| ! | ACCATACAGGGCATGAGTTT+TGG | - | chr2_1:4752579-4752598 | None:intergenic | 45.0% |
| !! | AAATAAAATTTATTATCATA+TGG | + | chr2_1:4755472-4755491 | Msa0189340:intron | 5.0% |
| TTGCAGAGAGATGAGGTGGT+AGG | - | chr2_1:4750585-4750604 | None:intergenic | 50.0% | |
| GAAGTTGCAGAGAGATGAGG+TGG | - | chr2_1:4750589-4750608 | None:intergenic | 50.0% | |
| TTGTGAATTCAGGGCTGACG+AGG | + | chr2_1:4750996-4751015 | Msa0189340:intron | 50.0% | |
| TTGGAGGAGTTATCTGGCAG+AGG | + | chr2_1:4751579-4751598 | Msa0189340:intron | 50.0% | |
| ! | TGAATGAGTGGCTACTGGCT+AGG | + | chr2_1:4751641-4751660 | Msa0189340:intron | 50.0% |
| !! | TAGACTGGCTTGTCGTAGCT+CGG | - | chr2_1:4751691-4751710 | None:intergenic | 50.0% |
| TTTCATCTCCTGATGCTCCG+AGG | + | chr2_1:4752105-4752124 | Msa0189340:intron | 50.0% | |
| ! | GTGTTTGGAAACGGGCCTTT+TGG | + | chr2_1:4752708-4752727 | Msa0189340:intron | 50.0% |
| GATGCCACGTGTCCCAAAAA+AGG | + | chr2_1:4753884-4753903 | Msa0189340:intron | 50.0% | |
| TGCCACGTGTCCCAAAAAAG+GGG | + | chr2_1:4753886-4753905 | Msa0189340:intron | 50.0% | |
| ATCACACCTTGAGGTAGGTG+TGG | + | chr2_1:4754917-4754936 | Msa0189340:intron | 50.0% | |
| TCACACCTTGAGGTAGGTGT+GGG | + | chr2_1:4754918-4754937 | Msa0189340:intron | 50.0% | |
| CGATCGAACCCGAATGGAAT+AGG | + | chr2_1:4755066-4755085 | Msa0189340:intron | 50.0% | |
| !!! | GGCTATTTTGGAGCAGGCTA+GGG | + | chr2_1:4756010-4756029 | Msa0189340:intron | 50.0% |
| !!! | GCTATTTTGGAGCAGGCTAG+GGG | + | chr2_1:4756011-4756030 | Msa0189340:intron | 50.0% |
| ! | GTAAGATTGGTTCCGGTGAC+AGG | + | chr2_1:4756135-4756154 | Msa0189340:intron | 50.0% |
| CAGCCTTGAAAACAAGCACC+CGG | + | chr2_1:4756162-4756181 | Msa0189340:intron | 50.0% | |
| !! | TGACCGGGTGCTTGTTTTCA+AGG | - | chr2_1:4756168-4756187 | None:intergenic | 50.0% |
| GTCGCACACTCGTATCAATG+TGG | + | chr2_1:4756385-4756404 | Msa0189340:intron | 50.0% | |
| AGAGTGGGATGTTCGGAGAA+CGG | - | chr2_1:4756430-4756449 | None:intergenic | 50.0% | |
| GTAACAAAGCGTGGTTGCGT+GGG | - | chr2_1:4756479-4756498 | None:intergenic | 50.0% | |
| TGTAACAAAGCGTGGTTGCG+TGG | - | chr2_1:4756480-4756499 | None:intergenic | 50.0% | |
| ATGGGTGGCTATGGAAGTCA+CGG | + | chr2_1:4756525-4756544 | Msa0189340:intron | 50.0% | |
| !!! | TTTTTTGGGGACGGTGGTCA+TGG | + | chr2_1:4756570-4756589 | Msa0189340:intron | 50.0% |
| !! | TTTTTGGGGACGGTGGTCAT+GGG | + | chr2_1:4756571-4756590 | Msa0189340:intron | 50.0% |
| ACTCGCTGAGAGTTGAACAG+AGG | + | chr2_1:4756827-4756846 | Msa0189340:intron | 50.0% | |
| ! | GTTAGCCTAGCGGTTACGTT+TGG | - | chr2_1:4756871-4756890 | None:intergenic | 50.0% |
| GGCGGATACAGTGTGAAACA+TGG | - | chr2_1:4756974-4756993 | None:intergenic | 50.0% | |
| AATTTCCACCACCACCGTCA+GGG | - | chr2_1:4756996-4757015 | None:intergenic | 50.0% | |
| AAATTTCCACCACCACCGTC+AGG | - | chr2_1:4756997-4757016 | None:intergenic | 50.0% | |
| !! | TGACGGTGGTGGTGGAAATT+TGG | + | chr2_1:4756996-4757015 | Msa0189340:intron | 50.0% |
| AGAAGCTCTATTGCGGGTCT+GGG | + | chr2_1:4757476-4757495 | Msa0189340:intron | 50.0% | |
| GCCCAATGTGTGTCTATTGC+AGG | + | chr2_1:4757508-4757527 | Msa0189340:intron | 50.0% | |
| ! | CGGTGGTTGTCGTTTCGTGT+GGG | - | chr2_1:4750562-4750581 | None:intergenic | 55.0% |
| CAGAGAGATGAGGTGGTAGG+CGG | - | chr2_1:4750582-4750601 | None:intergenic | 55.0% | |
| AGGAGTTGCTATCGTGTGGC+TGG | - | chr2_1:4752142-4752161 | None:intergenic | 55.0% | |
| TCTGGGCAGAAACACTGCAC+TGG | + | chr2_1:4752308-4752327 | Msa0189340:CDS | 55.0% | |
| !! | TCTGTCTTGCTGCTTTCCCG+TGG | + | chr2_1:4752739-4752758 | Msa0189340:intron | 55.0% |
| AGCAACCCACACCTACCTCA+AGG | - | chr2_1:4754926-4754945 | None:intergenic | 55.0% | |
| GAAACCCGATCGAACCCGAA+TGG | + | chr2_1:4755060-4755079 | Msa0189340:intron | 55.0% | |
| !!! | GGGCTATTTTGGAGCAGGCT+AGG | + | chr2_1:4756009-4756028 | Msa0189340:intron | 55.0% |
| GAGCAGGCTAGGGGTTTAAG+TGG | + | chr2_1:4756020-4756039 | Msa0189340:intron | 55.0% | |
| GGCTAGGGGTTTAAGTGGAC+CGG | + | chr2_1:4756025-4756044 | Msa0189340:intron | 55.0% | |
| !! | CGGGTGCTTGTTTTCAAGGC+TGG | - | chr2_1:4756164-4756183 | None:intergenic | 55.0% |
| ATAGTACCCGGTCACTGACC+GGG | - | chr2_1:4756183-4756202 | None:intergenic | 55.0% | |
| CATAGTACCCGGTCACTGAC+CGG | - | chr2_1:4756184-4756203 | None:intergenic | 55.0% | |
| TCCACCATCTTCTCTGACCC+AGG | + | chr2_1:4756338-4756357 | Msa0189340:intron | 55.0% | |
| CCACCATCTTCTCTGACCCA+GGG | + | chr2_1:4756339-4756358 | Msa0189340:intron | 55.0% | |
| TTGATACGAGTGTGCGACGC+TGG | - | chr2_1:4756383-4756402 | None:intergenic | 55.0% | |
| GAGTGGGATGTTCGGAGAAC+GGG | - | chr2_1:4756429-4756448 | None:intergenic | 55.0% | |
| CTGTCTTGGATGGGTGGCTA+TGG | + | chr2_1:4756516-4756535 | Msa0189340:intron | 55.0% | |
| !!! | AGTGGGTTTTTTGGGGACGG+TGG | + | chr2_1:4756564-4756583 | Msa0189340:intron | 55.0% |
| ! | CTAGCGGTTACGTTTGGTGG+TGG | - | chr2_1:4756865-4756884 | None:intergenic | 55.0% |
| CACCACCAAACGTAACCGCT+AGG | + | chr2_1:4756863-4756882 | Msa0189340:intron | 55.0% | |
| AGCCTAGCGGTTACGTTTGG+TGG | - | chr2_1:4756868-4756887 | None:intergenic | 55.0% | |
| ATTTCCACCACCACCGTCAG+GGG | - | chr2_1:4756995-4757014 | None:intergenic | 55.0% | |
| GAGAAGCTCTATTGCGGGTC+TGG | + | chr2_1:4757475-4757494 | Msa0189340:intron | 55.0% | |
| GAAGCTCTATTGCGGGTCTG+GGG | + | chr2_1:4757477-4757496 | Msa0189340:intron | 55.0% | |
| TCTATTGCGGGTCTGGGGAA+GGG | + | chr2_1:4757482-4757501 | Msa0189340:intron | 55.0% | |
| TCTGGGCAGAAACACTGCAC+TGG | + | chr2_1:4752308-4752327 | Msa0189340:CDS | 55.0% | |
| AGCGGTGCTCATGAAGGAAG+TGG | - | chr2_1:4758107-4758126 | None:intergenic | 55.0% | |
| ! | GCGGTGGTTGTCGTTTCGTG+TGG | - | chr2_1:4750563-4750582 | None:intergenic | 60.0% |
| AGAGATGAGGTGGTAGGCGG+TGG | - | chr2_1:4750579-4750598 | None:intergenic | 60.0% | |
| ! | GAAGTCAGCCTCGGAGCATC+AGG | - | chr2_1:4752116-4752135 | None:intergenic | 60.0% |
| GGCTGGAGTGAAGTCAGCCT+CGG | - | chr2_1:4752125-4752144 | None:intergenic | 60.0% | |
| !!! | GGCCCCTTTTTTGGGACACG+TGG | - | chr2_1:4753891-4753910 | None:intergenic | 60.0% |
| CAAGGCTGGAACCCTGTCAC+CGG | - | chr2_1:4756150-4756169 | None:intergenic | 60.0% | |
| ACAAGCACCCGGTCAGTGAC+CGG | + | chr2_1:4756173-4756192 | Msa0189340:intron | 60.0% | |
| CCCTGGGTCAGAGAAGATGG+TGG | - | chr2_1:4756342-4756361 | None:intergenic | 60.0% | |
| GAGAACGGGTGTGCGATGGA+GGG | - | chr2_1:4756415-4756434 | None:intergenic | 60.0% | |
| TTCGGAGAACGGGTGTGCGA+TGG | - | chr2_1:4756419-4756438 | None:intergenic | 60.0% | |
| GCGAGGCAGAGTGGGATGTT+CGG | - | chr2_1:4756437-4756456 | None:intergenic | 60.0% | |
| CGGAAAAGGCGAGGCAGAGT+GGG | - | chr2_1:4756445-4756464 | None:intergenic | 60.0% | |
| ACGGAAAAGGCGAGGCAGAG+TGG | - | chr2_1:4756446-4756465 | None:intergenic | 60.0% | |
| TAGGACGGACGGAAAAGGCG+AGG | - | chr2_1:4756454-4756473 | None:intergenic | 60.0% | |
| GGGACTAGGACGGACGGAAA+AGG | - | chr2_1:4756459-4756478 | None:intergenic | 60.0% | |
| TTGCGTGGGACTAGGACGGA+CGG | - | chr2_1:4756465-4756484 | None:intergenic | 60.0% | |
| GTGGTTGCGTGGGACTAGGA+CGG | - | chr2_1:4756469-4756488 | None:intergenic | 60.0% | |
| AAGCGTGGTTGCGTGGGACT+AGG | - | chr2_1:4756473-4756492 | None:intergenic | 60.0% | |
| !! | GTTTGGTGGTGGTGGCTTGC+AGG | - | chr2_1:4756854-4756873 | None:intergenic | 60.0% |
| !! | GCGGTTACGTTTGGTGGTGG+TGG | - | chr2_1:4756862-4756881 | None:intergenic | 60.0% |
| CACACTGTATCCGCCCCTGA+CGG | + | chr2_1:4756979-4756998 | Msa0189340:intron | 60.0% | |
| CTCTATTGCGGGTCTGGGGA+AGG | + | chr2_1:4757481-4757500 | Msa0189340:intron | 60.0% | |
| GTTGGTGCGCGAGCGATGAG+AGG | - | chr2_1:4755170-4755189 | None:intergenic | 65.0% | |
| CAAGCACCCGGTCAGTGACC+GGG | + | chr2_1:4756174-4756193 | Msa0189340:intron | 65.0% | |
| GGGCCCTGGGTCAGAGAAGA+TGG | - | chr2_1:4756345-4756364 | None:intergenic | 65.0% | |
| TCGTCAGAGGGAAGGGCCCT+GGG | - | chr2_1:4756358-4756377 | None:intergenic | 65.0% | |
| ! | GCTGGCCTCGTCAGAGGGAA+GGG | - | chr2_1:4756365-4756384 | None:intergenic | 65.0% |
| ACGGGTGTGCGATGGAGGGA+AGG | - | chr2_1:4756411-4756430 | None:intergenic | 65.0% | |
| GGAGAACGGGTGTGCGATGG+AGG | - | chr2_1:4756416-4756435 | None:intergenic | 65.0% | |
| TTGGGGACGGTGGTCATGGG+CGG | + | chr2_1:4756574-4756593 | Msa0189340:intron | 65.0% | |
| ACTGTATCCGCCCCTGACGG+TGG | + | chr2_1:4756982-4757001 | Msa0189340:intron | 65.0% | |
| TTGCGGGTCTGGGGAAGGGT+AGG | + | chr2_1:4757486-4757505 | Msa0189340:intron | 65.0% | |
| !! | CTGGAGGGGGAGCATCCCGT+TGG | - | chr2_1:4753634-4753653 | None:intergenic | 70.0% |
| CTCGTCAGAGGGAAGGGCCC+TGG | - | chr2_1:4756359-4756378 | None:intergenic | 70.0% | |
| CAGGGCCCTTCCCTCTGACG+AGG | + | chr2_1:4756357-4756376 | Msa0189340:intron | 70.0% | |
| ! | CGCTGGCCTCGTCAGAGGGA+AGG | - | chr2_1:4756366-4756385 | None:intergenic | 70.0% |
| ! | GCGACGCTGGCCTCGTCAGA+GGG | - | chr2_1:4756370-4756389 | None:intergenic | 70.0% |
| ! | TGCGACGCTGGCCTCGTCAG+AGG | - | chr2_1:4756371-4756390 | None:intergenic | 70.0% |
| GTATCCGCCCCTGACGGTGG+TGG | + | chr2_1:4756985-4757004 | Msa0189340:intron | 70.0% | |
| TCCACCACCACCGTCAGGGG+CGG | - | chr2_1:4756992-4757011 | None:intergenic | 70.0% | |
| ! | TCCGCCCCTGACGGTGGTGG+TGG | + | chr2_1:4756988-4757007 | Msa0189340:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 4750506 | 4758159 | 4750506 | ID=Msa0189340;Name=Msa0189340 |
| chr2_1 | mRNA | 4750506 | 4758159 | 4750506 | ID=Msa0189340-mRNA-1;Parent=Msa0189340;Name=Msa0189340-mRNA-1;_AED=0.20;_eAED=0.20;_QI=118|0.71|0.62|1|0.57|0.62|8|242|180 |
| chr2_1 | exon | 4750506 | 4750625 | 4750506 | ID=Msa0189340-mRNA-1:exon:2085;Parent=Msa0189340-mRNA-1 |
| chr2_1 | exon | 4751008 | 4751092 | 4751008 | ID=Msa0189340-mRNA-1:exon:2086;Parent=Msa0189340-mRNA-1 |
| chr2_1 | exon | 4752278 | 4752371 | 4752278 | ID=Msa0189340-mRNA-1:exon:2087;Parent=Msa0189340-mRNA-1 |
| chr2_1 | exon | 4752459 | 4752508 | 4752459 | ID=Msa0189340-mRNA-1:exon:2088;Parent=Msa0189340-mRNA-1 |
| chr2_1 | exon | 4755088 | 4755191 | 4755088 | ID=Msa0189340-mRNA-1:exon:2089;Parent=Msa0189340-mRNA-1 |
| chr2_1 | exon | 4755337 | 4755421 | 4755337 | ID=Msa0189340-mRNA-1:exon:2090;Parent=Msa0189340-mRNA-1 |
| chr2_1 | exon | 4757707 | 4757796 | 4757707 | ID=Msa0189340-mRNA-1:exon:2091;Parent=Msa0189340-mRNA-1 |
| chr2_1 | exon | 4757885 | 4758159 | 4757885 | ID=Msa0189340-mRNA-1:exon:2092;Parent=Msa0189340-mRNA-1 |
| chr2_1 | five_prime_UTR | 4750506 | 4750623 | 4750506 | ID=Msa0189340-mRNA-1:five_prime_utr;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4750624 | 4750625 | 4750624 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4751008 | 4751092 | 4751008 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4752278 | 4752371 | 4752278 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4752459 | 4752508 | 4752459 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4755088 | 4755191 | 4755088 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4755337 | 4755421 | 4755337 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4757707 | 4757796 | 4757707 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | CDS | 4757885 | 4757917 | 4757885 | ID=Msa0189340-mRNA-1:cds;Parent=Msa0189340-mRNA-1 |
| chr2_1 | three_prime_UTR | 4757918 | 4758159 | 4757918 | ID=Msa0189340-mRNA-1:three_prime_utr;Parent=Msa0189340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
