Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0953310 | GAU48477.1 | 100.000 | 110 | 0 | 0 | 8 | 117 | 1 | 110 | 3.25e-70 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0953310 | sp|Q9M352|RL362_ARATH | 80.909 | 110 | 21 | 0 | 8 | 117 | 1 | 110 | 7.85e-57 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0953310 | 0.821284 | 4.381066e-53 | -8.615850e-47 |
| Msa0002750 | Msa0953310 | 0.905032 | 6.585588e-80 | -8.615850e-47 |
| Msa0002790 | Msa0953310 | 0.884274 | 2.206493e-71 | -8.615850e-47 |
| Msa0003780 | Msa0953310 | 0.853212 | 2.775023e-61 | -8.615850e-47 |
| Msa0006380 | Msa0953310 | 0.805495 | 1.298625e-49 | -8.615850e-47 |
| Msa0025730 | Msa0953310 | 0.808236 | 3.419257e-50 | -8.615850e-47 |
| Msa0027260 | Msa0953310 | 0.892337 | 1.742808e-74 | -8.615850e-47 |
| Msa0032260 | Msa0953310 | 0.823652 | 1.234617e-53 | -8.615850e-47 |
| Msa0037250 | Msa0953310 | 0.814354 | 1.608313e-51 | -8.615850e-47 |
| Msa0040690 | Msa0953310 | 0.844961 | 5.465828e-59 | -8.615850e-47 |
| Msa0047160 | Msa0953310 | 0.830199 | 3.360079e-55 | -8.615850e-47 |
| Msa0048180 | Msa0953310 | 0.863380 | 2.593809e-64 | -8.615850e-47 |
| Msa0049370 | Msa0953310 | 0.845525 | 3.846402e-59 | -8.615850e-47 |
| Msa0055180 | Msa0953310 | 0.872674 | 2.652566e-67 | -8.615850e-47 |
| Msa0055190 | Msa0953310 | 0.834796 | 2.436575e-56 | -8.615850e-47 |
| Msa0056430 | Msa0953310 | 0.805059 | 1.602758e-49 | -8.615850e-47 |
| Msa0056470 | Msa0953310 | 0.892145 | 2.078450e-74 | -8.615850e-47 |
| Msa0059040 | Msa0953310 | 0.815501 | 8.951391e-52 | -8.615850e-47 |
| Msa0059110 | Msa0953310 | 0.813780 | 2.151845e-51 | -8.615850e-47 |
| Msa0072420 | Msa0953310 | 0.813476 | 2.511208e-51 | -8.615850e-47 |
| Msa0074030 | Msa0953310 | 0.843851 | 1.086375e-58 | -8.615850e-47 |
| Msa0085790 | Msa0953310 | 0.804110 | 2.527633e-49 | -8.615850e-47 |
| Msa0086750 | Msa0953310 | 0.904766 | 8.705306e-80 | -8.615850e-47 |
| Msa0090520 | Msa0953310 | 0.820405 | 6.979672e-53 | -8.615850e-47 |
| Msa0091880 | Msa0953310 | 0.814503 | 1.490719e-51 | -8.615850e-47 |
| Msa0094470 | Msa0953310 | 0.838672 | 2.502963e-57 | -8.615850e-47 |
| Msa0100730 | Msa0953310 | 0.820806 | 5.646759e-53 | -8.615850e-47 |
| Msa0100740 | Msa0953310 | 0.865309 | 6.485673e-65 | -8.615850e-47 |
| Msa0114870 | Msa0953310 | 0.827939 | 1.185620e-54 | -8.615850e-47 |
| Msa0116130 | Msa0953310 | 0.811186 | 7.940484e-51 | -8.615850e-47 |
| Msa0116670 | Msa0953310 | 0.842875 | 1.979209e-58 | -8.615850e-47 |
| Msa0118710 | Msa0953310 | 0.805350 | 1.393016e-49 | -8.615850e-47 |
| Msa0603320 | Msa0953310 | 0.806175 | 9.346966e-50 | -8.615850e-47 |
| Msa0615440 | Msa0953310 | 0.829860 | 4.063942e-55 | -8.615850e-47 |
| Msa0615580 | Msa0953310 | 0.832742 | 7.948149e-56 | -8.615850e-47 |
| Msa0620890 | Msa0953310 | 0.844756 | 6.209079e-59 | -8.615850e-47 |
| Msa0621950 | Msa0953310 | 0.834803 | 2.425927e-56 | -8.615850e-47 |
| Msa0622750 | Msa0953310 | 0.816636 | 4.994041e-52 | -8.615850e-47 |
| Msa0623200 | Msa0953310 | 0.813517 | 2.458917e-51 | -8.615850e-47 |
| Msa0642160 | Msa0953310 | 0.822379 | 2.445019e-53 | -8.615850e-47 |
| Msa0661300 | Msa0953310 | 0.887462 | 1.397752e-72 | -8.615850e-47 |
| Msa0664560 | Msa0953310 | 0.804887 | 1.740530e-49 | -8.615850e-47 |
| Msa0666230 | Msa0953310 | 0.835177 | 1.952581e-56 | -8.615850e-47 |
| Msa0666560 | Msa0953310 | -0.800196 | 1.614345e-48 | -8.615850e-47 |
| Msa0669520 | Msa0953310 | 0.807152 | 5.811797e-50 | -8.615850e-47 |
| Msa0688850 | Msa0953310 | 0.812891 | 3.374592e-51 | -8.615850e-47 |
| Msa0689260 | Msa0953310 | 0.807593 | 4.684965e-50 | -8.615850e-47 |
| Msa0698490 | Msa0953310 | 0.835017 | 2.142635e-56 | -8.615850e-47 |
| Msa0698660 | Msa0953310 | 0.832429 | 9.500188e-56 | -8.615850e-47 |
| Msa0698780 | Msa0953310 | 0.881343 | 2.597774e-70 | -8.615850e-47 |
| Msa0719510 | Msa0953310 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0725440 | Msa0953310 | 0.814706 | 1.343827e-51 | -8.615850e-47 |
| Msa0738100 | Msa0953310 | 0.814859 | 1.243291e-51 | -8.615850e-47 |
| Msa0769590 | Msa0953310 | 0.805855 | 1.091370e-49 | -8.615850e-47 |
| Msa0780490 | Msa0953310 | 0.801008 | 1.102443e-48 | -8.615850e-47 |
| Msa0784200 | Msa0953310 | 0.831967 | 1.235982e-55 | -8.615850e-47 |
| Msa0785130 | Msa0953310 | 0.824593 | 7.421516e-54 | -8.615850e-47 |
| Msa0788850 | Msa0953310 | 0.800955 | 1.130682e-48 | -8.615850e-47 |
| Msa0792760 | Msa0953310 | 0.838068 | 3.581852e-57 | -8.615850e-47 |
| Msa0800370 | Msa0953310 | 0.803167 | 3.966768e-49 | -8.615850e-47 |
| Msa0806880 | Msa0953310 | 0.837657 | 4.566739e-57 | -8.615850e-47 |
| Msa0817540 | Msa0953310 | 0.826799 | 2.224218e-54 | -8.615850e-47 |
| Msa0818310 | Msa0953310 | 0.819036 | 1.433784e-52 | -8.615850e-47 |
| Msa0830090 | Msa0953310 | 0.822145 | 2.771048e-53 | -8.615850e-47 |
| Msa0127310 | Msa0953310 | 0.820046 | 8.432889e-53 | -8.615850e-47 |
| Msa0128860 | Msa0953310 | 0.869650 | 2.641947e-66 | -8.615850e-47 |
| Msa0133540 | Msa0953310 | 0.819787 | 9.668505e-53 | -8.615850e-47 |
| Msa0137990 | Msa0953310 | 0.822861 | 1.888614e-53 | -8.615850e-47 |
| Msa0140820 | Msa0953310 | 0.897331 | 1.560296e-76 | -8.615850e-47 |
| Msa0140850 | Msa0953310 | 0.875242 | 3.596051e-68 | -8.615850e-47 |
| Msa0146340 | Msa0953310 | 0.872325 | 3.468295e-67 | -8.615850e-47 |
| Msa0148060 | Msa0953310 | 0.810233 | 1.276120e-50 | -8.615850e-47 |
| Msa0149200 | Msa0953310 | 0.828667 | 7.913796e-55 | -8.615850e-47 |
| Msa0159170 | Msa0953310 | 0.801497 | 8.755876e-49 | -8.615850e-47 |
| Msa0167480 | Msa0953310 | 0.801454 | 8.935529e-49 | -8.615850e-47 |
| Msa0173530 | Msa0953310 | 0.846204 | 2.515615e-59 | -8.615850e-47 |
| Msa0174730 | Msa0953310 | 0.869362 | 3.278699e-66 | -8.615850e-47 |
| Msa0181490 | Msa0953310 | 0.803136 | 4.026719e-49 | -8.615850e-47 |
| Msa0183090 | Msa0953310 | 0.808202 | 3.477860e-50 | -8.615850e-47 |
| Msa0183900 | Msa0953310 | 0.822222 | 2.658179e-53 | -8.615850e-47 |
| Msa0187930 | Msa0953310 | 0.821484 | 3.940955e-53 | -8.615850e-47 |
| Msa0188350 | Msa0953310 | 0.811756 | 5.970216e-51 | -8.615850e-47 |
| Msa0189340 | Msa0953310 | 0.821166 | 4.665254e-53 | -8.615850e-47 |
| Msa0189700 | Msa0953310 | 0.890614 | 8.404561e-74 | -8.615850e-47 |
| Msa0194540 | Msa0953310 | 0.816203 | 6.242274e-52 | -8.615850e-47 |
| Msa0199880 | Msa0953310 | 0.817231 | 3.671559e-52 | -8.615850e-47 |
| Msa0218830 | Msa0953310 | 0.832216 | 1.072581e-55 | -8.615850e-47 |
| Msa0220720 | Msa0953310 | 0.802328 | 5.909385e-49 | -8.615850e-47 |
| Msa0230490 | Msa0953310 | 0.829772 | 4.269912e-55 | -8.615850e-47 |
| Msa0231100 | Msa0953310 | 0.840434 | 8.714275e-58 | -8.615850e-47 |
| Msa0231980 | Msa0953310 | 0.817841 | 2.674959e-52 | -8.615850e-47 |
| Msa0232010 | Msa0953310 | 0.896532 | 3.371106e-76 | -8.615850e-47 |
| Msa0232050 | Msa0953310 | 0.827676 | 1.371868e-54 | -8.615850e-47 |
| Msa0232080 | Msa0953310 | 0.896838 | 2.511317e-76 | -8.615850e-47 |
| Msa0366890 | Msa0953310 | 0.853064 | 3.058221e-61 | -8.615850e-47 |
| Msa0369450 | Msa0953310 | 0.860883 | 1.513739e-63 | -8.615850e-47 |
| Msa0375310 | Msa0953310 | 0.800641 | 1.309962e-48 | -8.615850e-47 |
| Msa0380300 | Msa0953310 | 0.811570 | 6.553104e-51 | -8.615850e-47 |
| Msa0385580 | Msa0953310 | 0.850003 | 2.249021e-60 | -8.615850e-47 |
| Msa0393370 | Msa0953310 | 0.844301 | 8.229505e-59 | -8.615850e-47 |
| Msa0395820 | Msa0953310 | 0.812855 | 3.435668e-51 | -8.615850e-47 |
| Msa0395890 | Msa0953310 | 0.828398 | 9.194610e-55 | -8.615850e-47 |
| Msa0414800 | Msa0953310 | 0.841394 | 4.880006e-58 | -8.615850e-47 |
| Msa0421500 | Msa0953310 | 0.808822 | 2.564539e-50 | -8.615850e-47 |
| Msa0427150 | Msa0953310 | 0.846274 | 2.406764e-59 | -8.615850e-47 |
| Msa0443390 | Msa0953310 | 0.857446 | 1.623513e-62 | -8.615850e-47 |
| Msa0458060 | Msa0953310 | 0.808913 | 2.452067e-50 | -8.615850e-47 |
| Msa0462110 | Msa0953310 | 0.817030 | 4.072738e-52 | -8.615850e-47 |
| Msa0467380 | Msa0953310 | 0.807183 | 5.723652e-50 | -8.615850e-47 |
| Msa0482650 | Msa0953310 | 0.824554 | 7.580295e-54 | -8.615850e-47 |
| Msa0244780 | Msa0953310 | 0.821949 | 3.075473e-53 | -8.615850e-47 |
| Msa0249580 | Msa0953310 | 0.802232 | 6.187185e-49 | -8.615850e-47 |
| Msa0250820 | Msa0953310 | 0.852262 | 5.180291e-61 | -8.615850e-47 |
| Msa0250870 | Msa0953310 | 0.820442 | 6.845484e-53 | -8.615850e-47 |
| Msa0258390 | Msa0953310 | 0.821036 | 4.997594e-53 | -8.615850e-47 |
| Msa0258850 | Msa0953310 | 0.821276 | 4.401626e-53 | -8.615850e-47 |
| Msa0262310 | Msa0953310 | 0.813818 | 2.110914e-51 | -8.615850e-47 |
| Msa0262480 | Msa0953310 | 0.814362 | 1.601113e-51 | -8.615850e-47 |
| Msa0264010 | Msa0953310 | 0.831706 | 1.433565e-55 | -8.615850e-47 |
| Msa0268130 | Msa0953310 | 0.819944 | 8.901743e-53 | -8.615850e-47 |
| Msa0280610 | Msa0953310 | 0.840763 | 7.146639e-58 | -8.615850e-47 |
| Msa0289580 | Msa0953310 | 0.850252 | 1.915063e-60 | -8.615850e-47 |
| Msa0289610 | Msa0953310 | 0.853613 | 2.127976e-61 | -8.615850e-47 |
| Msa0298140 | Msa0953310 | 0.809995 | 1.436527e-50 | -8.615850e-47 |
| Msa0298200 | Msa0953310 | 0.814583 | 1.431106e-51 | -8.615850e-47 |
| Msa0298990 | Msa0953310 | 0.823502 | 1.338049e-53 | -8.615850e-47 |
| Msa0300350 | Msa0953310 | 0.809584 | 1.760428e-50 | -8.615850e-47 |
| Msa0306690 | Msa0953310 | 0.800890 | 1.165584e-48 | -8.615850e-47 |
| Msa0310030 | Msa0953310 | 0.800881 | 1.170427e-48 | -8.615850e-47 |
| Msa0317910 | Msa0953310 | 0.838480 | 2.805165e-57 | -8.615850e-47 |
| Msa0326480 | Msa0953310 | 0.806721 | 7.168143e-50 | -8.615850e-47 |
| Msa0327300 | Msa0953310 | 0.824321 | 8.600093e-54 | -8.615850e-47 |
| Msa0327330 | Msa0953310 | 0.855588 | 5.703835e-62 | -8.615850e-47 |
| Msa0336010 | Msa0953310 | 0.859967 | 2.865960e-63 | -8.615850e-47 |
| Msa0337240 | Msa0953310 | 0.800396 | 1.470218e-48 | -8.615850e-47 |
| Msa0337650 | Msa0953310 | 0.821128 | 4.759210e-53 | -8.615850e-47 |
| Msa0337670 | Msa0953310 | 0.845155 | 4.844713e-59 | -8.615850e-47 |
| Msa0348830 | Msa0953310 | 0.866396 | 2.941064e-65 | -8.615850e-47 |
| Msa0348990 | Msa0953310 | 0.823197 | 1.576821e-53 | -8.615850e-47 |
| Msa0357900 | Msa0953310 | 0.822162 | 2.745080e-53 | -8.615850e-47 |
| Msa0483110 | Msa0953310 | 0.820909 | 5.346171e-53 | -8.615850e-47 |
| Msa0483390 | Msa0953310 | 0.845772 | 3.296851e-59 | -8.615850e-47 |
| Msa0497210 | Msa0953310 | 0.857147 | 1.989354e-62 | -8.615850e-47 |
| Msa0497490 | Msa0953310 | 0.803153 | 3.993509e-49 | -8.615850e-47 |
| Msa0518390 | Msa0953310 | 0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0521050 | Msa0953310 | 0.884847 | 1.351513e-71 | -8.615850e-47 |
| Msa0524500 | Msa0953310 | 0.802434 | 5.620677e-49 | -8.615850e-47 |
| Msa0526540 | Msa0953310 | 0.844505 | 7.253020e-59 | -8.615850e-47 |
| Msa0527150 | Msa0953310 | 0.818521 | 1.876738e-52 | -8.615850e-47 |
| Msa0531650 | Msa0953310 | 0.839142 | 1.890874e-57 | -8.615850e-47 |
| Msa0548240 | Msa0953310 | 0.802045 | 6.759073e-49 | -8.615850e-47 |
| Msa0556060 | Msa0953310 | 0.808583 | 2.884466e-50 | -8.615850e-47 |
| Msa0576940 | Msa0953310 | 0.833303 | 5.761667e-56 | -8.615850e-47 |
| Msa0581110 | Msa0953310 | 0.869647 | 2.646239e-66 | -8.615850e-47 |
| Msa0586420 | Msa0953310 | 0.804381 | 2.220563e-49 | -8.615850e-47 |
| Msa0588360 | Msa0953310 | 0.900191 | 9.380457e-78 | -8.615850e-47 |
| Msa0858770 | Msa0953310 | 0.839902 | 1.200322e-57 | -8.615850e-47 |
| Msa0867060 | Msa0953310 | 0.800076 | 1.707373e-48 | -8.615850e-47 |
| Msa0881290 | Msa0953310 | 0.890429 | 9.936980e-74 | -8.615850e-47 |
| Msa0902760 | Msa0953310 | 0.861432 | 1.030554e-63 | -8.615850e-47 |
| Msa0953310 | Msa0956620 | 0.803004 | 4.286536e-49 | -8.615850e-47 |
| Msa0953310 | Msa0968590 | 0.826123 | 3.223754e-54 | -8.615850e-47 |
| Msa0953310 | Msa0989540 | 0.814248 | 1.697175e-51 | -8.615850e-47 |
| Msa0953310 | Msa1006840 | 0.869618 | 2.704390e-66 | -8.615850e-47 |
| Msa0953310 | Msa1012740 | 0.814040 | 1.886339e-51 | -8.615850e-47 |
| Msa0953310 | Msa1013400 | 0.857755 | 1.314688e-62 | -8.615850e-47 |
| Msa0953310 | Msa1019240 | 0.859829 | 3.155260e-63 | -8.615850e-47 |
| Msa0953310 | Msa1019260 | 0.882984 | 6.583908e-71 | -8.615850e-47 |
| Msa0953310 | Msa1021470 | 0.804033 | 2.622843e-49 | -8.615850e-47 |
| Msa0953310 | Msa1043690 | 0.840208 | 9.987822e-58 | -8.615850e-47 |
| Msa0953310 | Msa1051880 | 0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa0953310 | Msa1072710 | 0.813448 | 2.546678e-51 | -8.615850e-47 |
| Msa0953310 | Msa1078870 | 0.820541 | 6.494848e-53 | -8.615850e-47 |
| Msa0953310 | Msa1080350 | 0.822321 | 2.521936e-53 | -8.615850e-47 |
| Msa0953310 | Msa1081150 | 0.844250 | 8.490997e-59 | -8.615850e-47 |
| Msa0953310 | Msa1081930 | 0.851549 | 8.255369e-61 | -8.615850e-47 |
| Msa0953310 | Msa1088940 | 0.812736 | 3.648069e-51 | -8.615850e-47 |
| Msa0953310 | Msa1093530 | 0.860399 | 2.122677e-63 | -8.615850e-47 |
| Msa0953310 | Msa1104140 | 0.867971 | 9.230868e-66 | -8.615850e-47 |
| Msa0953310 | Msa1104210 | 0.875415 | 3.138858e-68 | -8.615850e-47 |
| Msa0953310 | Msa1125860 | 0.831051 | 2.077590e-55 | -8.615850e-47 |
| Msa0953310 | Msa1126060 | 0.826638 | 2.430306e-54 | -8.615850e-47 |
| Msa0953310 | Msa1126510 | 0.865872 | 4.308948e-65 | -8.615850e-47 |
| Msa0953310 | Msa1126770 | 0.809061 | 2.279297e-50 | -8.615850e-47 |
| Msa0953310 | Msa1126830 | 0.868022 | 8.892916e-66 | -8.615850e-47 |
| Msa0953310 | Msa1148910 | 0.825982 | 3.482503e-54 | -8.615850e-47 |
| Msa0953310 | Msa1163530 | 0.811385 | 7.188975e-51 | -8.615850e-47 |
| Msa0953310 | Msa1165780 | 0.840083 | 1.076498e-57 | -8.615850e-47 |
| Msa0953310 | Msa1165940 | 0.886470 | 3.326117e-72 | -8.615850e-47 |
| Msa0953310 | Msa1166860 | 0.870620 | 1.271664e-66 | -8.615850e-47 |
| Msa0953310 | Msa1166870 | 0.832818 | 7.607459e-56 | -8.615850e-47 |
| Msa0953310 | Msa1207270 | 0.862933 | 3.565724e-64 | -8.615850e-47 |
| Msa0953310 | Msa1213480 | 0.808297 | 3.318797e-50 | -8.615850e-47 |
| Msa0953310 | Msa1215820 | 0.896250 | 4.417469e-76 | -8.615850e-47 |
| Msa0953310 | Msa1218600 | 0.833917 | 4.049394e-56 | -8.615850e-47 |
| Msa0953310 | Msa1229320 | 0.823044 | 1.712096e-53 | -8.615850e-47 |
| Msa0953310 | Msa1230580 | 0.811202 | 7.879114e-51 | -8.615850e-47 |
| Msa0953310 | Msa1251160 | 0.829391 | 5.284787e-55 | -8.615850e-47 |
| Msa0953310 | Msa1254730 | 0.816606 | 5.071870e-52 | -8.615850e-47 |
| Msa0953310 | Msa1257510 | 0.869248 | 3.569400e-66 | -8.615850e-47 |
| Msa0953310 | Msa1262890 | 0.805900 | 1.067682e-49 | -8.615850e-47 |
| Msa0953310 | Msa1265630 | 0.833934 | 4.009880e-56 | -8.615850e-47 |
| Msa0953310 | Msa1273340 | 0.817221 | 3.689484e-52 | -8.615850e-47 |
| Msa0953310 | Msa1299590 | 0.833757 | 4.440081e-56 | -8.615850e-47 |
| Msa0953310 | Msa1300380 | 0.805812 | 1.114027e-49 | -8.615850e-47 |
| Msa0953310 | Msa1305050 | 0.816906 | 4.342260e-52 | -8.615850e-47 |
| Msa0953310 | Msa1332250 | 0.825614 | 4.257615e-54 | -8.615850e-47 |
| Msa0953310 | Msa1332590 | 0.805663 | 1.197222e-49 | -8.615850e-47 |
| Msa0953310 | Msa1336560 | 0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0953310 | Msa1338190 | 0.863996 | 1.669821e-64 | -8.615850e-47 |
| Msa0953310 | Msa1343260 | 0.889687 | 1.938211e-73 | -8.615850e-47 |
| Msa0953310 | Msa1349570 | 0.805628 | 1.217824e-49 | -8.615850e-47 |
| Msa0953310 | Msa1358250 | 0.808280 | 3.347222e-50 | -8.615850e-47 |
| Msa0953310 | Msa1362790 | 0.808385 | 3.178820e-50 | -8.615850e-47 |
| Msa0953310 | Msa1363330 | 0.849205 | 3.754146e-60 | -8.615850e-47 |
| Msa0953310 | Msa1366180 | 0.812974 | 3.235367e-51 | -8.615850e-47 |
| Msa0953310 | Msa1369190 | 0.802653 | 5.065308e-49 | -8.615850e-47 |
| Msa0953310 | Msa1374120 | 0.845845 | 3.149658e-59 | -8.615850e-47 |
| Msa0953310 | Msa1379760 | 0.865142 | 7.315148e-65 | -8.615850e-47 |
| Msa0953310 | Msa1382620 | 0.843996 | 9.935063e-59 | -8.615850e-47 |
| Msa0953310 | Msa1386600 | 0.849214 | 3.733000e-60 | -8.615850e-47 |
| Msa0953310 | Msa1394290 | 0.842180 | 3.026139e-58 | -8.615850e-47 |
| Msa0953310 | Msa1399530 | 0.846574 | 1.993794e-59 | -8.615850e-47 |
| Msa0953310 | Msa1413500 | 0.834472 | 2.938718e-56 | -8.615850e-47 |
| Msa0953310 | Msa1419870 | 0.803988 | 2.680234e-49 | -8.615850e-47 |
| Msa0953310 | Msa1426120 | 0.813555 | 2.412314e-51 | -8.615850e-47 |
| Msa0953310 | Msa1426490 | 0.806495 | 8.003133e-50 | -8.615850e-47 |
| Msa0953310 | Msa1432700 | 0.854177 | 1.463793e-61 | -8.615850e-47 |
| Msa0953310 | Msa1433310 | 0.828721 | 7.678758e-55 | -8.615850e-47 |
| Msa0953310 | Msa1448690 | 0.820486 | 6.688575e-53 | -8.615850e-47 |
| Msa0953310 | Msa1450280 | 0.844599 | 6.842709e-59 | -8.615850e-47 |
| Msa0953310 | Msa1456050 | 0.857903 | 1.188417e-62 | -8.615850e-47 |
| Msa0953310 | Msa1457920 | 0.828382 | 9.274310e-55 | -8.615850e-47 |
| Msa0953310 | Msa1465260 | 0.829235 | 5.765312e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0953310 | MtrunA17_Chr1g0203071 | 96.396 | 111 | 3 | 1 | 8 | 117 | 1 | 111 | 2.78e-71 | 208 |
| Msa0953310 | MtrunA17_Chr6g0470561 | 98.198 | 111 | 1 | 1 | 8 | 117 | 1 | 111 | 7.98e-71 | 207 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0953310 | AT3G53740.4 | 80.909 | 110 | 21 | 0 | 8 | 117 | 1 | 110 | 7.98e-58 | 174 |
| Msa0953310 | AT3G53740.2 | 80.909 | 110 | 21 | 0 | 8 | 117 | 1 | 110 | 7.98e-58 | 174 |
| Msa0953310 | AT3G53740.3 | 80.909 | 110 | 21 | 0 | 8 | 117 | 1 | 110 | 7.98e-58 | 174 |
| Msa0953310 | AT5G02450.1 | 82.692 | 104 | 18 | 0 | 14 | 117 | 3 | 106 | 4.20e-56 | 170 |
| Msa0953310 | AT2G37600.1 | 83.654 | 104 | 16 | 1 | 15 | 117 | 8 | 111 | 2.52e-55 | 168 |
| Msa0953310 | AT2G37600.2 | 83.654 | 104 | 16 | 1 | 15 | 117 | 8 | 111 | 2.52e-55 | 168 |
| Msa0953310 | AT3G53740.1 | 72.727 | 110 | 21 | 1 | 8 | 117 | 1 | 101 | 1.48e-48 | 150 |
Find 52 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCTTCTTGGCACGTTTA+TGG | 0.140365 | 6_3:-49403923 | None:intergenic |
| CTTCTTCTTGGCACGTTTAT+GGG | 0.210182 | 6_3:-49403922 | None:intergenic |
| TACCTGCGGTAGATTGAATT+AGG | 0.234420 | 6_3:-49401809 | None:intergenic |
| CATCTCTTCACGCTTCTTCT+TGG | 0.257153 | 6_3:-49403934 | None:intergenic |
| TTATTTCATTCCATGTTAAC+TGG | 0.294512 | 6_3:+49404128 | Msa0953310:three_prime_UTR |
| CCTTTACGGCTAGAGGGTTT+AGG | 0.305250 | 6_3:-49402081 | None:intergenic |
| TTGCGCAGGGCTGGTGGAGC+AGG | 0.388477 | 6_3:+49404081 | Msa0953310:intron |
| TAATGTTAAGAATGGGTGAT+TGG | 0.398603 | 6_3:+49404493 | Msa0953310:three_prime_UTR |
| CTAAACCCTCTAGCCGTAAA+GGG | 0.402747 | 6_3:+49402082 | Msa0953310:CDS |
| AAGAGCAATGTTGGATAGAA+AGG | 0.426788 | 6_3:-49404295 | None:intergenic |
| ATATGGCCTATGCCTCAATA+TGG | 0.439613 | 6_3:+49404417 | Msa0953310:three_prime_UTR |
| TATAGTTGTAATGTTAAGAA+TGG | 0.444359 | 6_3:+49404485 | Msa0953310:three_prime_UTR |
| ATGGGTTCCGAGCTTTCTCT+TGG | 0.449681 | 6_3:-49403904 | None:intergenic |
| GGCGCCGAAGCAGCCAAGTA+CGG | 0.452682 | 6_3:+49402005 | Msa0953310:CDS |
| GAAGAGCAAACCTCATCTTT+CGG | 0.452731 | 6_3:-49403968 | None:intergenic |
| AACCTCATCCGCGAGGTAGC+TGG | 0.486512 | 6_3:+49403810 | Msa0953310:CDS |
| CCTAAACCCTCTAGCCGTAA+AGG | 0.488599 | 6_3:+49402081 | Msa0953310:CDS |
| AGACCCGTACTTGGCTGCTT+CGG | 0.489391 | 6_3:-49402009 | None:intergenic |
| GCGCCGAAGCAGCCAAGTAC+GGG | 0.490664 | 6_3:+49402006 | Msa0953310:CDS |
| ATCACTGAATTGCTGAAGGT+TGG | 0.491376 | 6_3:+49403855 | Msa0953310:CDS |
| TGAAGGTTGGAAAGGATAAG+AGG | 0.498071 | 6_3:+49403868 | Msa0953310:CDS |
| TGATTTATGAAAAGTACCAT+TGG | 0.498649 | 6_3:+49404237 | Msa0953310:three_prime_UTR |
| GCAAGCGTGTGCACTTTGTA+AGG | 0.505489 | 6_3:+49403787 | Msa0953310:CDS |
| AGCCAGCTACCTCGCGGATG+AGG | 0.509753 | 6_3:-49403812 | None:intergenic |
| TCAGTGATACGCTTCTCATA+AGG | 0.516197 | 6_3:-49403840 | None:intergenic |
| GCACCGCCATATTGAGGCAT+AGG | 0.516372 | 6_3:-49404423 | None:intergenic |
| ATAGTTGTAATGTTAAGAAT+GGG | 0.518361 | 6_3:+49404486 | Msa0953310:three_prime_UTR |
| CAATTTGCACCGCCATATTG+AGG | 0.518900 | 6_3:-49404429 | None:intergenic |
| TAACAACGCAAGAGCAATGT+TGG | 0.522284 | 6_3:-49404304 | None:intergenic |
| TCATACCCCTTTACGGCTAG+AGG | 0.525898 | 6_3:-49402088 | None:intergenic |
| AAAACTTGTCTTTCAAAACA+TGG | 0.532631 | 6_3:-49404157 | None:intergenic |
| TGTTGTTACTAAGAAGGAGT+TGG | 0.545489 | 6_3:+49402056 | Msa0953310:CDS |
| AGAGCAATGTTGGATAGAAA+GGG | 0.548129 | 6_3:-49404294 | None:intergenic |
| GGGTCATGTTGTTACTAAGA+AGG | 0.556387 | 6_3:+49402050 | Msa0953310:CDS |
| TGAATTGCTGAAGGTTGGAA+AGG | 0.563716 | 6_3:+49403860 | Msa0953310:CDS |
| CATTATCATAAGCAATGTCA+AGG | 0.568912 | 6_3:-49404352 | None:intergenic |
| AAAGTTGCCAAGAGAAAGCT+CGG | 0.571574 | 6_3:+49403897 | Msa0953310:CDS |
| AAACTTGTCTTTCAAAACAT+GGG | 0.572384 | 6_3:-49404156 | None:intergenic |
| CATACCCCTTTACGGCTAGA+GGG | 0.582186 | 6_3:-49402087 | None:intergenic |
| ACCCTAATTCAATCTACCGC+AGG | 0.584160 | 6_3:+49401807 | None:intergenic |
| AATGTCAAGGTTGCAGACAA+AGG | 0.597524 | 6_3:-49404339 | None:intergenic |
| CCTCATCTTTCGGAGGACGT+TGG | 0.608911 | 6_3:-49403958 | None:intergenic |
| ATGGGTACATCCAGTTAACA+TGG | 0.610367 | 6_3:-49404138 | None:intergenic |
| GAAGGTTGGAAAGGATAAGA+GGG | 0.613741 | 6_3:+49403869 | Msa0953310:CDS |
| GCGTATCACTGAATTGCTGA+AGG | 0.627654 | 6_3:+49403851 | Msa0953310:CDS |
| CATAAAACAGAATAATCCAA+TGG | 0.631505 | 6_3:-49404253 | None:intergenic |
| CCAACGTCCTCCGAAAGATG+AGG | 0.657638 | 6_3:+49403958 | Msa0953310:CDS |
| TAAACCCTCTAGCCGTAAAG+GGG | 0.659101 | 6_3:+49402083 | Msa0953310:CDS |
| TGGCCTATGCCTCAATATGG+CGG | 0.673730 | 6_3:+49404420 | Msa0953310:three_prime_UTR |
| GAGCAAACCTCATCTTTCGG+AGG | 0.683152 | 6_3:-49403965 | None:intergenic |
| GTGCAAAGCCAGCTACCTCG+CGG | 0.704628 | 6_3:-49403818 | None:intergenic |
| TGTAAGGAACCTCATCCGCG+AGG | 0.767870 | 6_3:+49403803 | Msa0953310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAAAATTAACAAAAATA+TGG | - | chr6_3:49403537-49403556 | None:intergenic | 10.0% |
| !!! | TTATTTAAAAGACATTATTT+TGG | + | chr6_3:49403554-49403573 | Msa0953310:intron | 10.0% |
| !!! | GGTATGATTTTTTATTTTTA+GGG | + | chr6_3:49402104-49402123 | Msa0953310:intron | 15.0% |
| !!! | TTTTAGGTTTAGTTAATTTT+TGG | + | chr6_3:49402210-49402229 | Msa0953310:intron | 15.0% |
| !!! | TTTAGGTTTAGTTAATTTTT+GGG | + | chr6_3:49402211-49402230 | Msa0953310:intron | 15.0% |
| !!! | TTTTAATTTTCATTTGTGTT+TGG | + | chr6_3:49402258-49402277 | Msa0953310:intron | 15.0% |
| !!! | TTGAAGTTTAGTTAATTTTT+AGG | + | chr6_3:49402511-49402530 | Msa0953310:intron | 15.0% |
| !!! | AGAGTAAAATTAAATTGTTT+TGG | + | chr6_3:49403068-49403087 | Msa0953310:intron | 15.0% |
| !! | TAATACAATTGAAATCAAAA+GGG | - | chr6_3:49403343-49403362 | None:intergenic | 15.0% |
| !! | ATAATACAATTGAAATCAAA+AGG | - | chr6_3:49403344-49403363 | None:intergenic | 15.0% |
| !! | AAATGAATCTAAGAGAAAAA+TGG | - | chr6_3:49401911-49401930 | None:intergenic | 20.0% |
| !!! | TTCATTTTCAACAATGAATT+TGG | + | chr6_3:49401924-49401943 | Msa0953310:intron | 20.0% |
| !!! | TCATTTTCAACAATGAATTT+GGG | + | chr6_3:49401925-49401944 | Msa0953310:intron | 20.0% |
| !!! | TTTTGACTGATTTATGAATT+TGG | + | chr6_3:49401953-49401972 | Msa0953310:intron | 20.0% |
| !!! | TTTGACTGATTTATGAATTT+GGG | + | chr6_3:49401954-49401973 | Msa0953310:intron | 20.0% |
| !!! | AATTTGGGATTTTTTGATTT+TGG | + | chr6_3:49401969-49401988 | Msa0953310:intron | 20.0% |
| !!! | ATTTGGGATTTTTTGATTTT+GGG | + | chr6_3:49401970-49401989 | Msa0953310:intron | 20.0% |
| !!! | GGGTATGATTTTTTATTTTT+AGG | + | chr6_3:49402103-49402122 | Msa0953310:intron | 20.0% |
| !!! | GATAAATGAGAATCTATTTT+AGG | + | chr6_3:49402194-49402213 | Msa0953310:intron | 20.0% |
| !! | CAATAATCTGAGTAAATTAA+TGG | + | chr6_3:49402318-49402337 | Msa0953310:intron | 20.0% |
| !!! | TTGTTTTTTGAGCTAATTTT+TGG | + | chr6_3:49402389-49402408 | Msa0953310:intron | 20.0% |
| !!! | TGTTTTTTGAGCTAATTTTT+GGG | + | chr6_3:49402390-49402409 | Msa0953310:intron | 20.0% |
| !!! | TATTAGTGACAAATTGATTT+TGG | + | chr6_3:49402619-49402638 | Msa0953310:intron | 20.0% |
| !! | TGGTTAATGTTTGAATTTAT+TGG | + | chr6_3:49402639-49402658 | Msa0953310:intron | 20.0% |
| !!! | TTTGATGTTTAGTTAACTTT+TGG | + | chr6_3:49402681-49402700 | Msa0953310:intron | 20.0% |
| !!! | TTGATGTTTAGTTAACTTTT+GGG | + | chr6_3:49402682-49402701 | Msa0953310:intron | 20.0% |
| !!! | AGTTTAGTTTTAAGTTTTGT+TGG | + | chr6_3:49402869-49402888 | Msa0953310:intron | 20.0% |
| !!! | ATTGTTCATTTTTCATCTAA+TGG | - | chr6_3:49402948-49402967 | None:intergenic | 20.0% |
| !!! | GAGGAATTTTTTTTATAGTT+AGG | + | chr6_3:49402969-49402988 | Msa0953310:intron | 20.0% |
| !!! | TTTACAATAACATGGAATTT+TGG | + | chr6_3:49403302-49403321 | Msa0953310:intron | 20.0% |
| !! | ATAGTACTATGTAATATATC+TGG | + | chr6_3:49403585-49403604 | Msa0953310:intron | 20.0% |
| !! | TAATGAAATTGTTGATATTC+TGG | + | chr6_3:49403697-49403716 | Msa0953310:intron | 20.0% |
| !! | AATGAAATTGTTGATATTCT+GGG | + | chr6_3:49403698-49403717 | Msa0953310:intron | 20.0% |
| !! | AGTTCAATAATAAAACATCT+GGG | - | chr6_3:49404018-49404037 | None:intergenic | 20.0% |
| !! | AAGTTCAATAATAAAACATC+TGG | - | chr6_3:49404019-49404038 | None:intergenic | 20.0% |
| !!! | AAACAAAGCCTTATTTTTTA+TGG | + | chr6_3:49404375-49404394 | Msa0953310:three_prime_UTR | 20.0% |
| !! | CATTGAAACCATAAAAAATA+AGG | - | chr6_3:49404386-49404405 | None:intergenic | 20.0% |
| !! | TATAGTTGTAATGTTAAGAA+TGG | + | chr6_3:49404485-49404504 | Msa0953310:three_prime_UTR | 20.0% |
| !! | ATAGTTGTAATGTTAAGAAT+GGG | + | chr6_3:49404486-49404505 | Msa0953310:three_prime_UTR | 20.0% |
| ! | ATGAAATTGATTGAAGGAAT+TGG | - | chr6_3:49401866-49401885 | None:intergenic | 25.0% |
| !! | ATGATGATGAAATTGATTGA+AGG | - | chr6_3:49401872-49401891 | None:intergenic | 25.0% |
| !!! | ATTTTTTGATTTTGGGTTTC+AGG | + | chr6_3:49401977-49401996 | Msa0953310:intron | 25.0% |
| ! | TAAAAAATCATACCCCTTTA+CGG | - | chr6_3:49402098-49402117 | None:intergenic | 25.0% |
| !! | GTTATTGTTCATTTTGTGTT+TGG | + | chr6_3:49402172-49402191 | Msa0953310:intron | 25.0% |
| !!! | TTAATTTTTGGGTATAGTGA+TGG | + | chr6_3:49402222-49402241 | Msa0953310:intron | 25.0% |
| !!! | TGTTTGTTTTGATTTGTGTT+TGG | + | chr6_3:49402472-49402491 | Msa0953310:intron | 25.0% |
| ! | GTTATTAGTTGTAATAGTGA+AGG | + | chr6_3:49402764-49402783 | Msa0953310:intron | 25.0% |
| ! | AGATGAAAAATGAACAATTG+AGG | + | chr6_3:49402950-49402969 | Msa0953310:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr6_3:49402996-49403015 | None:intergenic | 25.0% |
| ! | ACATCAAATCACATAACAAA+TGG | - | chr6_3:49403254-49403273 | None:intergenic | 25.0% |
| !!! | TTGTATTATTTTTAGCCCTT+TGG | + | chr6_3:49403355-49403374 | Msa0953310:intron | 25.0% |
| ! | AGTTTCAATTGAAATCCAAA+GGG | - | chr6_3:49403373-49403392 | None:intergenic | 25.0% |
| ! | TAGTTTCAATTGAAATCCAA+AGG | - | chr6_3:49403374-49403393 | None:intergenic | 25.0% |
| !! | TGAAACTATCTTGTGATTTT+TGG | + | chr6_3:49403386-49403405 | Msa0953310:intron | 25.0% |
| ! | TAACTCAAATACATTCAATG+AGG | - | chr6_3:49403474-49403493 | None:intergenic | 25.0% |
| !! | ATATATCTGGAGTCAAAATA+AGG | + | chr6_3:49403598-49403617 | Msa0953310:intron | 25.0% |
| ! | TTATCATTGAAACTGTTCTT+TGG | + | chr6_3:49403726-49403745 | Msa0953310:intron | 25.0% |
| !!! | TATCTTTTTAATTTTGCGCA+GGG | + | chr6_3:49404068-49404087 | Msa0953310:intron | 25.0% |
| ! | TTATTTCATTCCATGTTAAC+TGG | + | chr6_3:49404128-49404147 | Msa0953310:three_prime_UTR | 25.0% |
| ! | AAACTTGTCTTTCAAAACAT+GGG | - | chr6_3:49404159-49404178 | None:intergenic | 25.0% |
| ! | AAAACTTGTCTTTCAAAACA+TGG | - | chr6_3:49404160-49404179 | None:intergenic | 25.0% |
| !!! | TGATTTATGAAAAGTACCAT+TGG | + | chr6_3:49404237-49404256 | Msa0953310:three_prime_UTR | 25.0% |
| ! | CATAAAACAGAATAATCCAA+TGG | - | chr6_3:49404256-49404275 | None:intergenic | 25.0% |
| ATCTAAGAGAAAAATGGTAG+AGG | - | chr6_3:49401905-49401924 | None:intergenic | 30.0% | |
| ! | TCTTTTTGTTGGATTGAACA+AGG | + | chr6_3:49402029-49402048 | Msa0953310:CDS | 30.0% |
| ! | CTTTTTGTTGGATTGAACAA+GGG | + | chr6_3:49402030-49402049 | Msa0953310:CDS | 30.0% |
| TTAGATATTAGTGATGCGTT+TGG | + | chr6_3:49402128-49402147 | Msa0953310:intron | 30.0% | |
| !!! | GTTTTTTATTGTCATAGCGA+AGG | + | chr6_3:49402588-49402607 | Msa0953310:intron | 30.0% |
| ! | TTTTATAGTTAGGTCCTGTT+TGG | + | chr6_3:49402979-49402998 | Msa0953310:intron | 30.0% |
| !! | CTATCTTGTGATTTTTGGAA+TGG | + | chr6_3:49403391-49403410 | Msa0953310:intron | 30.0% |
| ! | AAGCTGTTGCATTTTCATAT+AGG | - | chr6_3:49403499-49403518 | None:intergenic | 30.0% |
| ATATGAAAATGCAACAGCTT+TGG | + | chr6_3:49403499-49403518 | Msa0953310:intron | 30.0% | |
| !!! | CTATCTTTTTAATTTTGCGC+AGG | + | chr6_3:49404067-49404086 | Msa0953310:intron | 30.0% |
| CATTATCATAAGCAATGTCA+AGG | - | chr6_3:49404355-49404374 | None:intergenic | 30.0% | |
| ! | TCAATGCTTTTGTAGTGATA+TGG | + | chr6_3:49404400-49404419 | Msa0953310:three_prime_UTR | 30.0% |
| TAATGTTAAGAATGGGTGAT+TGG | + | chr6_3:49404493-49404512 | Msa0953310:three_prime_UTR | 30.0% | |
| AGAGAGAGAAAATTAGGGTT+TGG | - | chr6_3:49401837-49401856 | None:intergenic | 35.0% | |
| AGAGGAGAGAGAGAAAATTA+GGG | - | chr6_3:49401842-49401861 | None:intergenic | 35.0% | |
| AAGAGGAGAGAGAGAAAATT+AGG | - | chr6_3:49401843-49401862 | None:intergenic | 35.0% | |
| TTGATTGAAGGAATTGGAAG+AGG | - | chr6_3:49401860-49401879 | None:intergenic | 35.0% | |
| !!! | GATTTTGGGTTTCAGGAAAA+TGG | + | chr6_3:49401984-49402003 | Msa0953310:intron | 35.0% |
| TGTTGTTACTAAGAAGGAGT+TGG | + | chr6_3:49402056-49402075 | Msa0953310:CDS | 35.0% | |
| GTAAACCATTTGCATTGCAA+CGG | - | chr6_3:49402923-49402942 | None:intergenic | 35.0% | |
| ! | GATAGTTTGTGAGACTGTTT+GGG | - | chr6_3:49403191-49403210 | None:intergenic | 35.0% |
| ! | AGATAGTTTGTGAGACTGTT+TGG | - | chr6_3:49403192-49403211 | None:intergenic | 35.0% |
| TCAAATAAGCTCATCCAAAC+AGG | + | chr6_3:49403228-49403247 | Msa0953310:intron | 35.0% | |
| ! | GGCACTGTTTTACAATAACA+TGG | + | chr6_3:49403294-49403313 | Msa0953310:intron | 35.0% |
| TTGGAATGGCTTACGTAATA+TGG | + | chr6_3:49403405-49403424 | Msa0953310:intron | 35.0% | |
| !! | TTGGTTCTAGTCCTAATATG+CGG | + | chr6_3:49403745-49403764 | Msa0953310:intron | 35.0% |
| ! | TCTGTTTTATGCTAGAAACG+AGG | + | chr6_3:49404265-49404284 | Msa0953310:three_prime_UTR | 35.0% |
| AGAGCAATGTTGGATAGAAA+GGG | - | chr6_3:49404297-49404316 | None:intergenic | 35.0% | |
| AAGAGCAATGTTGGATAGAA+AGG | - | chr6_3:49404298-49404317 | None:intergenic | 35.0% | |
| ! | ATTAGGGTTTGGTTTACCTG+CGG | - | chr6_3:49401826-49401845 | None:intergenic | 40.0% |
| GGGTCATGTTGTTACTAAGA+AGG | + | chr6_3:49402050-49402069 | Msa0953310:CDS | 40.0% | |
| !!! | GAGCTAATTTTTGGGTTCAG+AGG | + | chr6_3:49402398-49402417 | Msa0953310:intron | 40.0% |
| GAGATTAGTGATGCATTTGC+TGG | + | chr6_3:49402709-49402728 | Msa0953310:intron | 40.0% | |
| CATTTCCGTTGCAATGCAAA+TGG | + | chr6_3:49402915-49402934 | Msa0953310:intron | 40.0% | |
| !! | GCTGTTTTCATGAGCTGTTT+TGG | + | chr6_3:49403103-49403122 | Msa0953310:intron | 40.0% |
| CACATAACAAATGGCCTGTT+TGG | - | chr6_3:49403245-49403264 | None:intergenic | 40.0% | |
| ! | TGAGTTGAGTTGTAGAATGC+AGG | + | chr6_3:49403273-49403292 | Msa0953310:intron | 40.0% |
| !!! | GCTTGCTAGTTTTCTGTTCA+AGG | - | chr6_3:49403773-49403792 | None:intergenic | 40.0% |
| TCAGTGATACGCTTCTCATA+AGG | - | chr6_3:49403843-49403862 | None:intergenic | 40.0% | |
| ATCACTGAATTGCTGAAGGT+TGG | + | chr6_3:49403855-49403874 | Msa0953310:CDS | 40.0% | |
| TGAATTGCTGAAGGTTGGAA+AGG | + | chr6_3:49403860-49403879 | Msa0953310:CDS | 40.0% | |
| TGAAGGTTGGAAAGGATAAG+AGG | + | chr6_3:49403868-49403887 | Msa0953310:CDS | 40.0% | |
| GAAGGTTGGAAAGGATAAGA+GGG | + | chr6_3:49403869-49403888 | Msa0953310:CDS | 40.0% | |
| AAAGTTGCCAAGAGAAAGCT+CGG | + | chr6_3:49403897-49403916 | Msa0953310:CDS | 40.0% | |
| CTTCTTCTTGGCACGTTTAT+GGG | - | chr6_3:49403925-49403944 | None:intergenic | 40.0% | |
| GAAGAGCAAACCTCATCTTT+CGG | - | chr6_3:49403971-49403990 | None:intergenic | 40.0% | |
| !!! | TTTTTAATTTTGCGCAGGGC+TGG | + | chr6_3:49404072-49404091 | Msa0953310:intron | 40.0% |
| ATGGGTACATCCAGTTAACA+TGG | - | chr6_3:49404141-49404160 | None:intergenic | 40.0% | |
| TAACAACGCAAGAGCAATGT+TGG | - | chr6_3:49404307-49404326 | None:intergenic | 40.0% | |
| AATGTCAAGGTTGCAGACAA+AGG | - | chr6_3:49404342-49404361 | None:intergenic | 40.0% | |
| ATATGGCCTATGCCTCAATA+TGG | + | chr6_3:49404417-49404436 | Msa0953310:three_prime_UTR | 40.0% | |
| CCAACAAAAAGACCCGTACT+TGG | - | chr6_3:49402021-49402040 | None:intergenic | 45.0% | |
| ! | CCAAGTACGGGTCTTTTTGT+TGG | + | chr6_3:49402018-49402037 | Msa0953310:CDS | 45.0% |
| CTAAACCCTCTAGCCGTAAA+GGG | + | chr6_3:49402082-49402101 | Msa0953310:CDS | 45.0% | |
| TAAACCCTCTAGCCGTAAAG+GGG | + | chr6_3:49402083-49402102 | Msa0953310:CDS | 45.0% | |
| !! | TGTTCAAGGCACCGCATATT+AGG | - | chr6_3:49403759-49403778 | None:intergenic | 45.0% |
| GCGTATCACTGAATTGCTGA+AGG | + | chr6_3:49403851-49403870 | Msa0953310:CDS | 45.0% | |
| GCTTCTTCTTGGCACGTTTA+TGG | - | chr6_3:49403926-49403945 | None:intergenic | 45.0% | |
| CATCTCTTCACGCTTCTTCT+TGG | - | chr6_3:49403937-49403956 | None:intergenic | 45.0% | |
| CAATTTGCACCGCCATATTG+AGG | - | chr6_3:49404432-49404451 | None:intergenic | 45.0% | |
| CCTTTACGGCTAGAGGGTTT+AGG | - | chr6_3:49402084-49402103 | None:intergenic | 50.0% | |
| CCTAAACCCTCTAGCCGTAA+AGG | + | chr6_3:49402081-49402100 | Msa0953310:CDS | 50.0% | |
| CATACCCCTTTACGGCTAGA+GGG | - | chr6_3:49402090-49402109 | None:intergenic | 50.0% | |
| TCATACCCCTTTACGGCTAG+AGG | - | chr6_3:49402091-49402110 | None:intergenic | 50.0% | |
| GCAAGCGTGTGCACTTTGTA+AGG | + | chr6_3:49403787-49403806 | Msa0953310:CDS | 50.0% | |
| ATGGGTTCCGAGCTTTCTCT+TGG | - | chr6_3:49403907-49403926 | None:intergenic | 50.0% | |
| GAGCAAACCTCATCTTTCGG+AGG | - | chr6_3:49403968-49403987 | None:intergenic | 50.0% | |
| ! | TTAATTTTGCGCAGGGCTGG+TGG | + | chr6_3:49404075-49404094 | Msa0953310:intron | 50.0% |
| TGGCCTATGCCTCAATATGG+CGG | + | chr6_3:49404420-49404439 | Msa0953310:three_prime_UTR | 50.0% | |
| AGACCCGTACTTGGCTGCTT+CGG | - | chr6_3:49402012-49402031 | None:intergenic | 55.0% | |
| TGTAAGGAACCTCATCCGCG+AGG | + | chr6_3:49403803-49403822 | Msa0953310:CDS | 55.0% | |
| CCTCATCTTTCGGAGGACGT+TGG | - | chr6_3:49403961-49403980 | None:intergenic | 55.0% | |
| CCAACGTCCTCCGAAAGATG+AGG | + | chr6_3:49403958-49403977 | Msa0953310:CDS | 55.0% | |
| GCACCGCCATATTGAGGCAT+AGG | - | chr6_3:49404426-49404445 | None:intergenic | 55.0% | |
| AACCTCATCCGCGAGGTAGC+TGG | + | chr6_3:49403810-49403829 | Msa0953310:CDS | 60.0% | |
| GTGCAAAGCCAGCTACCTCG+CGG | - | chr6_3:49403821-49403840 | None:intergenic | 60.0% | |
| ! | GGCGCCGAAGCAGCCAAGTA+CGG | + | chr6_3:49402005-49402024 | Msa0953310:CDS | 65.0% |
| GCGCCGAAGCAGCCAAGTAC+GGG | + | chr6_3:49402006-49402025 | Msa0953310:CDS | 65.0% | |
| AGCCAGCTACCTCGCGGATG+AGG | - | chr6_3:49403815-49403834 | None:intergenic | 65.0% | |
| ! | TTGCGCAGGGCTGGTGGAGC+AGG | + | chr6_3:49404081-49404100 | Msa0953310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 49401812 | 49404546 | 49401812 | ID=Msa0953310;Name=Msa0953310 |
| chr6_3 | mRNA | 49401812 | 49404546 | 49401812 | ID=Msa0953310-mRNA-1;Parent=Msa0953310;Name=Msa0953310-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|1|1|1|0.66|0.5|4|427|117 |
| chr6_3 | exon | 49401812 | 49401828 | 49401812 | ID=Msa0953310-mRNA-1:exon:10779;Parent=Msa0953310-mRNA-1 |
| chr6_3 | exon | 49401999 | 49402104 | 49401999 | ID=Msa0953310-mRNA-1:exon:10780;Parent=Msa0953310-mRNA-1 |
| chr6_3 | exon | 49403780 | 49403979 | 49403780 | ID=Msa0953310-mRNA-1:exon:10781;Parent=Msa0953310-mRNA-1 |
| chr6_3 | exon | 49404089 | 49404546 | 49404089 | ID=Msa0953310-mRNA-1:exon:10782;Parent=Msa0953310-mRNA-1 |
| chr6_3 | CDS | 49401812 | 49401828 | 49401812 | ID=Msa0953310-mRNA-1:cds;Parent=Msa0953310-mRNA-1 |
| chr6_3 | CDS | 49401999 | 49402104 | 49401999 | ID=Msa0953310-mRNA-1:cds;Parent=Msa0953310-mRNA-1 |
| chr6_3 | CDS | 49403780 | 49403979 | 49403780 | ID=Msa0953310-mRNA-1:cds;Parent=Msa0953310-mRNA-1 |
| chr6_3 | CDS | 49404089 | 49404119 | 49404089 | ID=Msa0953310-mRNA-1:cds;Parent=Msa0953310-mRNA-1 |
| chr6_3 | three_prime_UTR | 49404120 | 49404546 | 49404120 | ID=Msa0953310-mRNA-1:three_prime_utr;Parent=Msa0953310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
