Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191420 | XP_039686171.1 | 98.815 | 422 | 5 | 0 | 1 | 422 | 480 | 901 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191420 | sp|Q0D5G4|Y7633_ORYSJ | 55.966 | 352 | 137 | 10 | 12 | 359 | 615 | 952 | 5.70e-115 | 361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191420 | A0A396J3B3 | 98.578 | 422 | 5 | 1 | 1 | 422 | 477 | 897 | 0.0 | 848 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0191370 | Msa0191420 | 0.808482 | 3.030924e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191420 | MtrunA17_Chr2g0281191 | 98.578 | 422 | 5 | 1 | 1 | 422 | 477 | 897 | 0.0 | 848 |
| Msa0191420 | MtrunA17_Chr4g0012861 | 46.667 | 375 | 166 | 10 | 9 | 368 | 483 | 838 | 3.79e-95 | 305 |
| Msa0191420 | MtrunA17_Chr3g0107701 | 49.688 | 320 | 139 | 8 | 27 | 342 | 527 | 828 | 2.99e-86 | 281 |
| Msa0191420 | MtrunA17_Chr5g0432721 | 42.593 | 162 | 73 | 5 | 185 | 342 | 629 | 774 | 3.91e-26 | 111 |
| Msa0191420 | MtrunA17_Chr5g0432721 | 49.254 | 67 | 34 | 0 | 29 | 95 | 512 | 578 | 2.10e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0191420 | AT4G32010.2 | 44.951 | 307 | 160 | 5 | 9 | 308 | 415 | 719 | 2.67e-74 | 247 |
| Msa0191420 | AT4G32010.1 | 44.951 | 307 | 160 | 5 | 9 | 308 | 419 | 723 | 3.54e-74 | 247 |
| Msa0191420 | AT2G30470.1 | 48.413 | 252 | 119 | 4 | 29 | 276 | 463 | 707 | 3.54e-65 | 223 |
| Msa0191420 | AT4G21550.1 | 47.020 | 151 | 51 | 4 | 199 | 349 | 541 | 662 | 2.23e-22 | 100 |
| Msa0191420 | AT4G21550.1 | 49.123 | 114 | 53 | 2 | 4 | 117 | 438 | 546 | 3.32e-14 | 75.1 |
| Msa0191420 | AT4G21550.3 | 51.111 | 90 | 43 | 1 | 4 | 93 | 438 | 526 | 2.79e-16 | 81.3 |
| Msa0191420 | AT4G21550.2 | 50.000 | 76 | 37 | 1 | 4 | 79 | 438 | 512 | 7.20e-11 | 64.3 |
Find 137 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATCACTCTCGTACCTTTC+TGG | 0.160003 | 2_1:+7032340 | None:intergenic |
| TTGTCGCCTGGTTCAGATTC+TGG | 0.241849 | 2_1:-7031331 | Msa0191420:CDS |
| AGATCAATTTGGCCTTTAAA+TGG | 0.248134 | 2_1:+7031382 | None:intergenic |
| ATAAAAGAGGGGTAGGAAAA+AGG | 0.284887 | 2_1:-7030978 | Msa0191420:three_prime_UTR |
| GCTGGATATTGAGATCAATT+TGG | 0.303683 | 2_1:+7031371 | None:intergenic |
| ATCATTACCCTCCTTGTTCA+TGG | 0.305949 | 2_1:+7031447 | None:intergenic |
| TACCCTCCTTGTTCATGGTT+GGG | 0.322992 | 2_1:+7031452 | None:intergenic |
| TCATCCGTGTCTCCATTTAA+AGG | 0.326774 | 2_1:-7031394 | Msa0191420:CDS |
| ATCTGTCGCTTAGGTTGAAT+TGG | 0.334190 | 2_1:-7033863 | None:intergenic |
| GTGCACTTCTTCCAGCAAAA+TGG | 0.337367 | 2_1:-7032387 | Msa0191420:CDS |
| GGCCCTTTCCACTAGGCGGC+TGG | 0.351565 | 2_1:+7031686 | None:intergenic |
| GTGCATGTCTGCTTATGCTT+GGG | 0.356470 | 2_1:+7031664 | None:intergenic |
| TCCTGATCATGCTGAAGCTT+TGG | 0.362667 | 2_1:-7031827 | Msa0191420:CDS |
| TTTCAGATGAAGGCAGTTGC+TGG | 0.379421 | 2_1:+7031524 | None:intergenic |
| CTTAGCAACGGTGTTATTCA+TGG | 0.385576 | 2_1:-7031172 | Msa0191420:CDS |
| TCTTCTCACGCCGTAACATA+AGG | 0.386896 | 2_1:+7031602 | None:intergenic |
| AATTGGCTGATCCTAGTTCC+TGG | 0.387306 | 2_1:-7033846 | Msa0191420:CDS |
| GTGGGTGTTTAGTTGTGGCC+TGG | 0.391891 | 2_1:+7031743 | None:intergenic |
| TTACAGGATGCTCCGGTGCT+TGG | 0.393729 | 2_1:-7032966 | Msa0191420:intron |
| ACAATGCTTGGGACATGATT+AGG | 0.404239 | 2_1:+7033643 | None:intergenic |
| TTACCCTCCTTGTTCATGGT+TGG | 0.412271 | 2_1:+7031451 | None:intergenic |
| TACAGGATGCTCCGGTGCTT+GGG | 0.413480 | 2_1:-7032965 | Msa0191420:intron |
| GGACATGTTCAGATAATTCA+TGG | 0.414352 | 2_1:-7032366 | Msa0191420:CDS |
| TTCCTTGCATAATAGTAATA+CGG | 0.417300 | 2_1:-7031485 | Msa0191420:CDS |
| GGTACGGTGAGCTCTCAAAA+AGG | 0.425203 | 2_1:+7030841 | None:intergenic |
| GACAATTCTTCTTCTCGCTC+TGG | 0.431144 | 2_1:+7031349 | None:intergenic |
| ACTTGCAAATCTAGCAATCC+TGG | 0.433506 | 2_1:-7031791 | Msa0191420:CDS |
| CCTTCAATCACCACAATGCT+TGG | 0.436508 | 2_1:+7033631 | None:intergenic |
| CTTTGAGTTTGAGGAATATG+AGG | 0.436772 | 2_1:-7033608 | Msa0191420:intron |
| ACACGTTCATAGACAAAGAC+TGG | 0.448302 | 2_1:+7031116 | None:intergenic |
| TGTGCATGTCTGCTTATGCT+TGG | 0.449862 | 2_1:+7031663 | None:intergenic |
| TGGGTGTTTAGTTGTGGCCT+GGG | 0.452762 | 2_1:+7031744 | None:intergenic |
| CAGTAGTCATAATGCTGATA+AGG | 0.453305 | 2_1:-7031146 | Msa0191420:CDS |
| TTCATGTTTGTACATAAAAG+AGG | 0.456618 | 2_1:-7030991 | Msa0191420:three_prime_UTR |
| TGATCATGCTGAAGCTTTGG+AGG | 0.457477 | 2_1:-7031824 | Msa0191420:CDS |
| TCAACATTTGACCAGGAACT+AGG | 0.459457 | 2_1:+7033835 | None:intergenic |
| GTGAAATTCATATTGGTGCT+AGG | 0.463726 | 2_1:-7031095 | Msa0191420:exon |
| TGGTCAAATGTTGATAAGTC+AGG | 0.467081 | 2_1:-7033826 | Msa0191420:CDS |
| ATTCTTCTTCTCGCTCTGGC+TGG | 0.467907 | 2_1:+7031353 | None:intergenic |
| TTAGTTGTGGCCTGGGAAGA+TGG | 0.468284 | 2_1:+7031751 | None:intergenic |
| AATTAAGTAGAAACATTTCA+AGG | 0.469189 | 2_1:+7030756 | None:intergenic |
| GCAAACAATGCAAGAGCAGC+CGG | 0.469885 | 2_1:+7031711 | None:intergenic |
| CCAAGCATTGTGGTGATTGA+AGG | 0.474053 | 2_1:-7033631 | Msa0191420:CDS |
| TGAACGTGTGAAATTCATAT+TGG | 0.477324 | 2_1:-7031102 | Msa0191420:exon |
| TTATCACTAGTGAAAATAGA+TGG | 0.477763 | 2_1:+7032939 | None:intergenic |
| TCCAAAGCTTCAGCATGATC+AGG | 0.479989 | 2_1:+7031826 | None:intergenic |
| ATCCAGCCGCCTAGTGGAAA+GGG | 0.481833 | 2_1:-7031688 | Msa0191420:CDS |
| GTTTCCGTACCCTTATGTTA+CGG | 0.488608 | 2_1:-7031612 | Msa0191420:CDS |
| TGATTTACGTAGGGAAATCA+TGG | 0.489278 | 2_1:-7030904 | Msa0191420:three_prime_UTR |
| CCATTCAAACCTGAATTACA+AGG | 0.491131 | 2_1:+7031998 | None:intergenic |
| TCTGGTACTGGAGATTCATC+AGG | 0.492385 | 2_1:-7031238 | Msa0191420:CDS |
| TCAAGCAAAATTTCAGATGA+AGG | 0.493848 | 2_1:+7031514 | None:intergenic |
| GAAAATGAAGGCCACTAAGC+AGG | 0.495097 | 2_1:-7031851 | Msa0191420:CDS |
| GATTGAAGGCTTTGAGTTTG+AGG | 0.495120 | 2_1:-7033617 | Msa0191420:CDS |
| CTTCTCACGCCGTAACATAA+GGG | 0.500342 | 2_1:+7031603 | None:intergenic |
| ATGATCAGGATCCTGCTTAG+TGG | 0.500883 | 2_1:+7031840 | None:intergenic |
| GGAGGCTCTCCCATCTTCCC+AGG | 0.502386 | 2_1:-7031761 | Msa0191420:CDS |
| TGAAATTCATATTGGTGCTA+GGG | 0.503538 | 2_1:-7031094 | Msa0191420:three_prime_UTR |
| GAGCAGCCGGGTCTATGTCG+TGG | 0.505284 | 2_1:+7031724 | None:intergenic |
| TTCAGATGAAGGCAGTTGCT+GGG | 0.508534 | 2_1:+7031525 | None:intergenic |
| TCCTTGCATAATAGTAATAC+GGG | 0.509224 | 2_1:-7031484 | Msa0191420:CDS |
| CATCCAGCCGCCTAGTGGAA+AGG | 0.510624 | 2_1:-7031689 | Msa0191420:CDS |
| TTTGTACATAAAAGAGGGGT+AGG | 0.516099 | 2_1:-7030985 | Msa0191420:three_prime_UTR |
| ATCAGGTAGTCAGTCACAGC+AGG | 0.516556 | 2_1:-7031221 | Msa0191420:CDS |
| ACTTTGTTGAACTCTGGTAC+TGG | 0.527710 | 2_1:-7031250 | Msa0191420:CDS |
| ATACATAGCAAAAGAAGCAC+TGG | 0.528619 | 2_1:-7033803 | Msa0191420:CDS |
| CAGCAGACTTTGTTGAACTC+TGG | 0.530003 | 2_1:-7031256 | Msa0191420:CDS |
| CTTGCAAATCTAGCAATCCT+GGG | 0.532774 | 2_1:-7031790 | Msa0191420:CDS |
| CTTCAATCACCACAATGCTT+GGG | 0.534367 | 2_1:+7033632 | None:intergenic |
| TGCTTGGGGCCCTTTCCACT+AGG | 0.534401 | 2_1:+7031679 | None:intergenic |
| ATGAACAAGGAGGGTAATGA+TGG | 0.534494 | 2_1:-7031445 | Msa0191420:CDS |
| TCATGTTTGTACATAAAAGA+GGG | 0.539130 | 2_1:-7030990 | Msa0191420:three_prime_UTR |
| AATGGAGCTGAATGAGGTAG+TGG | 0.544122 | 2_1:-7030881 | Msa0191420:three_prime_UTR |
| CTTGCAAAGCTTGTTGAAGT+GGG | 0.549392 | 2_1:-7031056 | Msa0191420:three_prime_UTR |
| TAGTTGTGGCCTGGGAAGAT+GGG | 0.553270 | 2_1:+7031752 | None:intergenic |
| TGCATGTCTGCTTATGCTTG+GGG | 0.556813 | 2_1:+7031665 | None:intergenic |
| CGAGAAGAAGAATTGTCGCC+TGG | 0.557693 | 2_1:-7031343 | Msa0191420:CDS |
| ATAATTCATGGGATCCAGAA+AGG | 0.562018 | 2_1:-7032354 | Msa0191420:intron |
| ATTAAGTAGAAACATTTCAA+GGG | 0.566789 | 2_1:+7030757 | None:intergenic |
| TCCGTAGTTCATATCCACTT+CGG | 0.569611 | 2_1:-7031024 | Msa0191420:three_prime_UTR |
| TGCTTGGGACATGATTAGGA+GGG | 0.573196 | 2_1:+7033647 | None:intergenic |
| TAATAGAGCTGAAGATTACA+TGG | 0.574564 | 2_1:-7033696 | Msa0191420:CDS |
| AGCAGCCGGGTCTATGTCGT+GGG | 0.575738 | 2_1:+7031725 | None:intergenic |
| TTTCAATGTTGTTGATCAGG+TGG | 0.578147 | 2_1:+7030820 | None:intergenic |
| ATAGATGGCTTCCCAAGCAC+CGG | 0.579291 | 2_1:+7032954 | None:intergenic |
| ATGTCGTGGGTGTTTAGTTG+TGG | 0.582924 | 2_1:+7031738 | None:intergenic |
| TCATGGAATGGAGCTGAATG+AGG | 0.589024 | 2_1:-7030887 | Msa0191420:three_prime_UTR |
| GATCATGCTGAAGCTTTGGA+GGG | 0.590184 | 2_1:-7031823 | Msa0191420:CDS |
| ACCCGTATTACTATTATGCA+AGG | 0.591046 | 2_1:+7031483 | None:intergenic |
| GCAGGTAGGAGATGTTGTGA+GGG | 0.592609 | 2_1:-7031203 | Msa0191420:CDS |
| TACATAGCAAAAGAAGCACT+GGG | 0.595326 | 2_1:-7033802 | Msa0191420:CDS |
| AGCAGTTTCCAAGAAAATGA+AGG | 0.595741 | 2_1:-7031863 | Msa0191420:CDS |
| TTGCAAAGCTTGTTGAAGTG+GGG | 0.600330 | 2_1:-7031055 | Msa0191420:three_prime_UTR |
| GCTGGAAGAAGTGCACATGC+TGG | 0.600458 | 2_1:+7032394 | None:intergenic |
| TACGTAGGGAAATCATGGAA+TGG | 0.601921 | 2_1:-7030899 | Msa0191420:three_prime_UTR |
| GTTTGCATCCAGCCGCCTAG+TGG | 0.603172 | 2_1:-7031694 | Msa0191420:CDS |
| CAAACAATGCAAGAGCAGCC+GGG | 0.603823 | 2_1:+7031712 | None:intergenic |
| ACACCACCAGAATCTGAACC+AGG | 0.607711 | 2_1:+7031325 | None:intergenic |
| TGACTTATCAACATTTGACC+AGG | 0.608800 | 2_1:+7033828 | None:intergenic |
| GACATGTTCAGATAATTCAT+GGG | 0.609897 | 2_1:-7032365 | Msa0191420:CDS |
| TAGTAGCCCAACCATGAACA+AGG | 0.610538 | 2_1:-7031458 | Msa0191420:CDS |
| ATGCTTGGGACATGATTAGG+AGG | 0.611515 | 2_1:+7033646 | None:intergenic |
| CACGTTCATAGACAAAGACT+GGG | 0.613315 | 2_1:+7031117 | None:intergenic |
| TCTTGCAAAGCTTGTTGAAG+TGG | 0.614065 | 2_1:-7031057 | Msa0191420:three_prime_UTR |
| TGAATAGTAAGACGCCGAAG+TGG | 0.619978 | 2_1:+7031010 | None:intergenic |
| GCCGAAGTGGATATGAACTA+CGG | 0.623117 | 2_1:+7031023 | None:intergenic |
| ATTACATGGCAAGAAGCTCA+AGG | 0.624749 | 2_1:-7033682 | Msa0191420:CDS |
| AGCAGGTAGGAGATGTTGTG+AGG | 0.624795 | 2_1:-7031204 | Msa0191420:CDS |
| CTTGGGACATGATTAGGAGG+GGG | 0.628705 | 2_1:+7033649 | None:intergenic |
| AATGTGAACATTGTCTGAAG+TGG | 0.629729 | 2_1:-7032426 | Msa0191420:CDS |
| ACATCATAGTGATTTACGTA+GGG | 0.632534 | 2_1:-7030913 | Msa0191420:three_prime_UTR |
| GGTAGTCAGTCACAGCAGGT+AGG | 0.633855 | 2_1:-7031217 | Msa0191420:CDS |
| TTGGCCTTTAAATGGAGACA+CGG | 0.638401 | 2_1:+7031390 | None:intergenic |
| TTGCAAATCTAGCAATCCTG+GGG | 0.642083 | 2_1:-7031789 | Msa0191420:CDS |
| TAATCATGTCCCAAGCATTG+TGG | 0.643328 | 2_1:-7033641 | Msa0191420:CDS |
| CATGTTTGTACATAAAAGAG+GGG | 0.646204 | 2_1:-7030989 | Msa0191420:three_prime_UTR |
| AGCCCAACCATGAACAAGGA+GGG | 0.646404 | 2_1:-7031454 | Msa0191420:CDS |
| GTTCTGATGATGATCCTCAC+CGG | 0.646876 | 2_1:-7031423 | Msa0191420:CDS |
| ATTCAAACCTGAATTACAAG+GGG | 0.647708 | 2_1:+7032000 | None:intergenic |
| CATTCAAACCTGAATTACAA+GGG | 0.647900 | 2_1:+7031999 | None:intergenic |
| ATGTTGTTGATCAGGTGGTA+CGG | 0.648704 | 2_1:+7030825 | None:intergenic |
| GCTTGGGACATGATTAGGAG+GGG | 0.648870 | 2_1:+7033648 | None:intergenic |
| ATGGAGCTGAATGAGGTAGT+GGG | 0.654269 | 2_1:-7030880 | Msa0191420:three_prime_UTR |
| CACGCCGTAACATAAGGGTA+CGG | 0.656740 | 2_1:+7031608 | None:intergenic |
| AAACACCCACGACATAGACC+CGG | 0.669434 | 2_1:-7031730 | Msa0191420:CDS |
| AGGGAAGTGAAGCTTAGCAA+CGG | 0.671793 | 2_1:-7031184 | Msa0191420:CDS |
| GAAATTCATATTGGTGCTAG+GGG | 0.672820 | 2_1:-7031093 | Msa0191420:three_prime_UTR |
| CACATGTAATGTCTGTCTAA+CGG | 0.673914 | 2_1:-7031644 | Msa0191420:CDS |
| TTGGGGCCCTTTCCACTAGG+CGG | 0.682669 | 2_1:+7031682 | None:intergenic |
| TCGCCTGGTTCAGATTCTGG+TGG | 0.694439 | 2_1:-7031328 | Msa0191420:CDS |
| GACATCATAGTGATTTACGT+AGG | 0.696019 | 2_1:-7030914 | Msa0191420:three_prime_UTR |
| ACATTTCAGCAGCAGCATCG+TGG | 0.696358 | 2_1:+7031290 | None:intergenic |
| TAGCCCAACCATGAACAAGG+AGG | 0.716754 | 2_1:-7031455 | Msa0191420:CDS |
| CTTGTGTTACCAGAAAATCG+TGG | 0.719517 | 2_1:+7030939 | None:intergenic |
| TGCAAATCTAGCAATCCTGG+GGG | 0.721871 | 2_1:-7031788 | Msa0191420:CDS |
| TTCAAACCTGAATTACAAGG+GGG | 0.743313 | 2_1:+7032001 | None:intergenic |
| ACATAGCAAAAGAAGCACTG+GGG | 0.799937 | 2_1:-7033801 | Msa0191420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGCGTATTAATTTATATTAT+TGG | + | chr2_1:7031062-7031081 | None:intergenic | 15.0% |
| !!! | TATTGATTGCATATTTATAT+AGG | + | chr2_1:7032421-7032440 | None:intergenic | 15.0% |
| !! | TATAATAAATTGCTAAACAA+TGG | - | chr2_1:7032626-7032645 | Msa0191420:intron | 15.0% |
| !! | ACAACTAATTAAAAATTGTT+TGG | + | chr2_1:7033828-7033847 | None:intergenic | 15.0% |
| !!! | TTTTAATTAGTTGTTTAGTT+AGG | - | chr2_1:7033834-7033853 | Msa0191420:CDS | 15.0% |
| !! | AAAGAGAAAAAACAACATAT+TGG | - | chr2_1:7030782-7030801 | Msa0191420:three_prime_UTR | 20.0% |
| !! | AAGAGAAAAAACAACATATT+GGG | - | chr2_1:7030783-7030802 | Msa0191420:three_prime_UTR | 20.0% |
| !!! | TATTTTCACTAGTGATAATA+TGG | - | chr2_1:7031606-7031625 | Msa0191420:CDS | 20.0% |
| !!! | ATTTTCACTAGTGATAATAT+GGG | - | chr2_1:7031607-7031626 | Msa0191420:CDS | 20.0% |
| !! | TAAATAACTCATCCTTAATT+CGG | - | chr2_1:7031631-7031650 | Msa0191420:CDS | 20.0% |
| !!! | TGTATTATTTTTATATGGTG+TGG | - | chr2_1:7031704-7031723 | Msa0191420:CDS | 20.0% |
| !! | TTGGGAAAAAATATAAGAAA+TGG | - | chr2_1:7032265-7032284 | Msa0191420:intron | 20.0% |
| !! | TATTGTTAATTGCATTTGTT+TGG | - | chr2_1:7032653-7032672 | Msa0191420:intron | 20.0% |
| !! | ATTAAGTAGAAACATTTCAA+GGG | + | chr2_1:7033786-7033805 | None:intergenic | 20.0% |
| !! | AATTAAGTAGAAACATTTCA+AGG | + | chr2_1:7033787-7033806 | None:intergenic | 20.0% |
| ! | ACGTCTAAAAATTGAAAATG+AGG | - | chr2_1:7030818-7030837 | Msa0191420:three_prime_UTR | 25.0% |
| !! | TACTTAAAGAAAGCACATTT+AGG | + | chr2_1:7031037-7031056 | None:intergenic | 25.0% |
| ! | AATTAATACGCTTTCATCTT+CGG | - | chr2_1:7031070-7031089 | Msa0191420:three_prime_UTR | 25.0% |
| !!! | GGCTAGTTTTATATAAACAA+AGG | + | chr2_1:7031113-7031132 | None:intergenic | 25.0% |
| !! | TTACAAGTCTTATAACAACA+TGG | + | chr2_1:7031217-7031236 | None:intergenic | 25.0% |
| ! | TTATCACTAGTGAAAATAGA+TGG | + | chr2_1:7031604-7031623 | None:intergenic | 25.0% |
| !! | TTTTCACTAGTGATAATATG+GGG | - | chr2_1:7031608-7031627 | Msa0191420:CDS | 25.0% |
| ! | ATTTGATCAAAACCGAATTA+AGG | + | chr2_1:7031646-7031665 | None:intergenic | 25.0% |
| !! | AATTAAGTTCTGATTTAGAC+TGG | - | chr2_1:7032010-7032029 | Msa0191420:CDS | 25.0% |
| !! | ATTAAGTTCTGATTTAGACT+GGG | - | chr2_1:7032011-7032030 | Msa0191420:CDS | 25.0% |
| ! | TTCCTTGCATAATAGTAATA+CGG | - | chr2_1:7033055-7033074 | Msa0191420:intron | 25.0% |
| ! | TTCATGTTTGTACATAAAAG+AGG | - | chr2_1:7033549-7033568 | Msa0191420:intron | 25.0% |
| ! | TCATGTTTGTACATAAAAGA+GGG | - | chr2_1:7033550-7033569 | Msa0191420:intron | 25.0% |
| ! | TCAAGGGTTAAAAATCAATT+GGG | + | chr2_1:7033770-7033789 | None:intergenic | 25.0% |
| ! | TTCAAGGGTTAAAAATCAAT+TGG | + | chr2_1:7033771-7033790 | None:intergenic | 25.0% |
| TAATAGAGCTGAAGATTACA+TGG | - | chr2_1:7030844-7030863 | Msa0191420:three_prime_UTR | 30.0% | |
| GACACGTTCTAATTATCATT+TGG | + | chr2_1:7031134-7031153 | None:intergenic | 30.0% | |
| TTTCAACTAAGAACGCAAAA+TGG | + | chr2_1:7031181-7031200 | None:intergenic | 30.0% | |
| ! | ACTATTTTGTTGAAGTCACT+TGG | - | chr2_1:7031430-7031449 | Msa0191420:CDS | 30.0% |
| !! | TAAAAGCATTCTCAGCATAA+AGG | + | chr2_1:7031557-7031576 | None:intergenic | 30.0% |
| !! | CGGTTTTGATCAAATTGTAT+TGG | - | chr2_1:7031651-7031670 | Msa0191420:CDS | 30.0% |
| ! | TAATAACGACCATGATGTTT+TGG | - | chr2_1:7031782-7031801 | Msa0191420:CDS | 30.0% |
| CAATCAAATCCAAAACATCA+TGG | + | chr2_1:7031794-7031813 | None:intergenic | 30.0% | |
| TATATTGCTGTGCATTTATC+AGG | - | chr2_1:7031938-7031957 | Msa0191420:intron | 30.0% | |
| ! | TTAAGTTCTGATTTAGACTG+GGG | - | chr2_1:7032012-7032031 | Msa0191420:CDS | 30.0% |
| !!! | GTACTTTATTTTCCAGTGAA+AGG | - | chr2_1:7032078-7032097 | Msa0191420:intron | 30.0% |
| GACATGTTCAGATAATTCAT+GGG | - | chr2_1:7032175-7032194 | Msa0191420:intron | 30.0% | |
| ! | ACATGTAAAACAGATTGGTT+GGG | - | chr2_1:7032247-7032266 | Msa0191420:intron | 30.0% |
| AATAAGCATGGAATAAGTTG+AGG | + | chr2_1:7032378-7032397 | None:intergenic | 30.0% | |
| ATTCAAACCTGAATTACAAG+GGG | + | chr2_1:7032543-7032562 | None:intergenic | 30.0% | |
| CATTCAAACCTGAATTACAA+GGG | + | chr2_1:7032544-7032563 | None:intergenic | 30.0% | |
| ATATTACATAGACCATGACA+AGG | + | chr2_1:7032602-7032621 | None:intergenic | 30.0% | |
| !!! | TGTTGTTTCTGCTTCTTTTT+CGG | + | chr2_1:7032970-7032989 | None:intergenic | 30.0% |
| TCAAGCAAAATTTCAGATGA+AGG | + | chr2_1:7033029-7033048 | None:intergenic | 30.0% | |
| TCCTTGCATAATAGTAATAC+GGG | - | chr2_1:7033056-7033075 | Msa0191420:intron | 30.0% | |
| ! | AGATCAATTTGGCCTTTAAA+TGG | + | chr2_1:7033161-7033180 | None:intergenic | 30.0% |
| TGAACGTGTGAAATTCATAT+TGG | - | chr2_1:7033438-7033457 | Msa0191420:intron | 30.0% | |
| !! | TGAAATTCATATTGGTGCTA+GGG | - | chr2_1:7033446-7033465 | Msa0191420:intron | 30.0% |
| CATGTTTGTACATAAAAGAG+GGG | - | chr2_1:7033551-7033570 | Msa0191420:intron | 30.0% | |
| ACATCATAGTGATTTACGTA+GGG | - | chr2_1:7033627-7033646 | Msa0191420:CDS | 30.0% | |
| ! | CATTTTCAATGTTGTTGATC+AGG | + | chr2_1:7033726-7033745 | None:intergenic | 30.0% |
| TGACTTATCAACATTTGACC+AGG | + | chr2_1:7030715-7030734 | None:intergenic | 35.0% | |
| ! | TGGTCAAATGTTGATAAGTC+AGG | - | chr2_1:7030714-7030733 | Msa0191420:three_prime_UTR | 35.0% |
| ! | ATACATAGCAAAAGAAGCAC+TGG | - | chr2_1:7030737-7030756 | Msa0191420:three_prime_UTR | 35.0% |
| !! | TACATAGCAAAAGAAGCACT+GGG | - | chr2_1:7030738-7030757 | Msa0191420:three_prime_UTR | 35.0% |
| ! | CTTTGAGTTTGAGGAATATG+AGG | - | chr2_1:7030932-7030951 | Msa0191420:three_prime_UTR | 35.0% |
| CTGAAACAAAGCAAGAGAAA+TGG | + | chr2_1:7030960-7030979 | None:intergenic | 35.0% | |
| !! | CTCTTGCTTTGTTTCAGAAA+TGG | - | chr2_1:7030963-7030982 | Msa0191420:three_prime_UTR | 35.0% |
| !! | GTTTGTTATGTCTGTGACTT+AGG | + | chr2_1:7031255-7031274 | None:intergenic | 35.0% |
| AAGTCACAGACATAACAAAC+AGG | - | chr2_1:7031255-7031274 | Msa0191420:CDS | 35.0% | |
| AGTCACAGACATAACAAACA+GGG | - | chr2_1:7031256-7031275 | Msa0191420:CDS | 35.0% | |
| ACAGGGAATTAAAGTGATGA+AGG | - | chr2_1:7031273-7031292 | Msa0191420:CDS | 35.0% | |
| CATCACAAATGATCTTCAAC+TGG | - | chr2_1:7031318-7031337 | Msa0191420:CDS | 35.0% | |
| !!! | TCTTCAACTGGTTTTAGTTG+AGG | - | chr2_1:7031330-7031349 | Msa0191420:CDS | 35.0% |
| TAGTATCTATGTTCACAGAC+AGG | + | chr2_1:7031414-7031433 | None:intergenic | 35.0% | |
| GTCTGTGTTGTAATCTTTCT+TGG | - | chr2_1:7031482-7031501 | Msa0191420:CDS | 35.0% | |
| ATGAGAATTGCTATGCATTG+TGG | - | chr2_1:7031528-7031547 | Msa0191420:CDS | 35.0% | |
| ! | TATGCTGAGAATGCTTTTAC+AGG | - | chr2_1:7031558-7031577 | Msa0191420:CDS | 35.0% |
| ACTCAACAACAATAGTCAAC+AGG | + | chr2_1:7031746-7031765 | None:intergenic | 35.0% | |
| ! | TAAGTTCTGATTTAGACTGG+GGG | - | chr2_1:7032013-7032032 | Msa0191420:CDS | 35.0% |
| AGTATACTGAATCCTTTCAC+TGG | + | chr2_1:7032093-7032112 | None:intergenic | 35.0% | |
| AATGTGAACATTGTCTGAAG+TGG | - | chr2_1:7032114-7032133 | Msa0191420:intron | 35.0% | |
| GGACATGTTCAGATAATTCA+TGG | - | chr2_1:7032174-7032193 | Msa0191420:intron | 35.0% | |
| ATAATTCATGGGATCCAGAA+AGG | - | chr2_1:7032186-7032205 | Msa0191420:intron | 35.0% | |
| AGGATGTGTTAACAAGTGAA+TGG | + | chr2_1:7032224-7032243 | None:intergenic | 35.0% | |
| ! | CAATCTGTTTTACATGTGGA+AGG | + | chr2_1:7032244-7032263 | None:intergenic | 35.0% |
| CTTCCACATGTAAAACAGAT+TGG | - | chr2_1:7032242-7032261 | Msa0191420:intron | 35.0% | |
| ! | CAACCAATCTGTTTTACATG+TGG | + | chr2_1:7032248-7032267 | None:intergenic | 35.0% |
| CACATGTAAAACAGATTGGT+TGG | - | chr2_1:7032246-7032265 | Msa0191420:intron | 35.0% | |
| TTCAAACCTGAATTACAAGG+GGG | + | chr2_1:7032542-7032561 | None:intergenic | 35.0% | |
| CCATTCAAACCTGAATTACA+AGG | + | chr2_1:7032545-7032564 | None:intergenic | 35.0% | |
| ! | CCTTGTAATTCAGGTTTGAA+TGG | - | chr2_1:7032542-7032561 | Msa0191420:intron | 35.0% |
| AGCAGTTTCCAAGAAAATGA+AGG | - | chr2_1:7032677-7032696 | Msa0191420:intron | 35.0% | |
| CACATGTAATGTCTGTCTAA+CGG | - | chr2_1:7032896-7032915 | Msa0191420:intron | 35.0% | |
| ACCCGTATTACTATTATGCA+AGG | + | chr2_1:7033060-7033079 | None:intergenic | 35.0% | |
| GCTGGATATTGAGATCAATT+TGG | + | chr2_1:7033172-7033191 | None:intergenic | 35.0% | |
| CAGTAGTCATAATGCTGATA+AGG | - | chr2_1:7033394-7033413 | Msa0191420:intron | 35.0% | |
| ! | GTGAAATTCATATTGGTGCT+AGG | - | chr2_1:7033445-7033464 | Msa0191420:intron | 35.0% |
| !! | GAAATTCATATTGGTGCTAG+GGG | - | chr2_1:7033447-7033466 | Msa0191420:intron | 35.0% |
| TTTGTACATAAAAGAGGGGT+AGG | - | chr2_1:7033555-7033574 | Msa0191420:intron | 35.0% | |
| ATAAAAGAGGGGTAGGAAAA+AGG | - | chr2_1:7033562-7033581 | Msa0191420:intron | 35.0% | |
| TAAAAGAGGGGTAGGAAAAA+GGG | - | chr2_1:7033563-7033582 | Msa0191420:intron | 35.0% | |
| ! | GTGAAAAAACCACGATTTTC+TGG | - | chr2_1:7033592-7033611 | Msa0191420:intron | 35.0% |
| GACATCATAGTGATTTACGT+AGG | - | chr2_1:7033626-7033645 | Msa0191420:CDS | 35.0% | |
| TGATTTACGTAGGGAAATCA+TGG | - | chr2_1:7033636-7033655 | Msa0191420:CDS | 35.0% | |
| TTTCAATGTTGTTGATCAGG+TGG | + | chr2_1:7033723-7033742 | None:intergenic | 35.0% | |
| TCAACATTTGACCAGGAACT+AGG | + | chr2_1:7030708-7030727 | None:intergenic | 40.0% | |
| !! | ACATAGCAAAAGAAGCACTG+GGG | - | chr2_1:7030739-7030758 | Msa0191420:three_prime_UTR | 40.0% |
| ATTACATGGCAAGAAGCTCA+AGG | - | chr2_1:7030858-7030877 | Msa0191420:three_prime_UTR | 40.0% | |
| ACAATGCTTGGGACATGATT+AGG | + | chr2_1:7030900-7030919 | None:intergenic | 40.0% | |
| ! | TAATCATGTCCCAAGCATTG+TGG | - | chr2_1:7030899-7030918 | Msa0191420:three_prime_UTR | 40.0% |
| CTTCAATCACCACAATGCTT+GGG | + | chr2_1:7030911-7030930 | None:intergenic | 40.0% | |
| !! | GATTGAAGGCTTTGAGTTTG+AGG | - | chr2_1:7030923-7030942 | Msa0191420:three_prime_UTR | 40.0% |
| GAACTATATCACCTGCATCA+TGG | + | chr2_1:7031156-7031175 | None:intergenic | 40.0% | |
| ! | TCACTTGGCTCGTCTTATAT+TGG | - | chr2_1:7031445-7031464 | Msa0191420:CDS | 40.0% |
| ! | AATGCTTTTACAGGATGCTC+CGG | - | chr2_1:7031567-7031586 | Msa0191420:CDS | 40.0% |
| ! | AAAAGTCAATGCTAGTCTCC+AGG | + | chr2_1:7031831-7031850 | None:intergenic | 40.0% |
| ! | TCTGAACATGTCCATTTTGC+TGG | + | chr2_1:7032167-7032186 | None:intergenic | 40.0% |
| ! | TGGAATAAGTTGAGGAAGAC+TGG | + | chr2_1:7032370-7032389 | None:intergenic | 40.0% |
| GTGCTTTGTGCAAATAAGCA+TGG | + | chr2_1:7032390-7032409 | None:intergenic | 40.0% | |
| TTGTTACCCCCTTGTAATTC+AGG | - | chr2_1:7032533-7032552 | Msa0191420:intron | 40.0% | |
| ATGTCTCAGATTCCTTGTCA+TGG | - | chr2_1:7032587-7032606 | Msa0191420:intron | 40.0% | |
| ! | CTTAGTGGCCTTCATTTTCT+TGG | + | chr2_1:7032688-7032707 | None:intergenic | 40.0% |
| ACTTGCAAATCTAGCAATCC+TGG | - | chr2_1:7032749-7032768 | Msa0191420:intron | 40.0% | |
| CTTGCAAATCTAGCAATCCT+GGG | - | chr2_1:7032750-7032769 | Msa0191420:intron | 40.0% | |
| TTGCAAATCTAGCAATCCTG+GGG | - | chr2_1:7032751-7032770 | Msa0191420:intron | 40.0% | |
| GTTTCCGTACCCTTATGTTA+CGG | - | chr2_1:7032928-7032947 | Msa0191420:intron | 40.0% | |
| ATCATTACCCTCCTTGTTCA+TGG | + | chr2_1:7033096-7033115 | None:intergenic | 40.0% | |
| ATGAACAAGGAGGGTAATGA+TGG | - | chr2_1:7033095-7033114 | Msa0191420:intron | 40.0% | |
| ! | GAGACACGGATGATTTTATC+CGG | + | chr2_1:7033139-7033158 | None:intergenic | 40.0% |
| TCATCCGTGTCTCCATTTAA+AGG | - | chr2_1:7033146-7033165 | Msa0191420:intron | 40.0% | |
| ! | TTGGCCTTTAAATGGAGACA+CGG | + | chr2_1:7033153-7033172 | None:intergenic | 40.0% |
| ACTTTGTTGAACTCTGGTAC+TGG | - | chr2_1:7033290-7033309 | Msa0191420:intron | 40.0% | |
| !! | CTTAGCAACGGTGTTATTCA+TGG | - | chr2_1:7033368-7033387 | Msa0191420:intron | 40.0% |
| CACGTTCATAGACAAAGACT+GGG | + | chr2_1:7033426-7033445 | None:intergenic | 40.0% | |
| ACACGTTCATAGACAAAGAC+TGG | + | chr2_1:7033427-7033446 | None:intergenic | 40.0% | |
| !! | TCTTGCAAAGCTTGTTGAAG+TGG | - | chr2_1:7033483-7033502 | Msa0191420:intron | 40.0% |
| !! | CTTGCAAAGCTTGTTGAAGT+GGG | - | chr2_1:7033484-7033503 | Msa0191420:intron | 40.0% |
| !! | TTGCAAAGCTTGTTGAAGTG+GGG | - | chr2_1:7033485-7033504 | Msa0191420:intron | 40.0% |
| TCCGTAGTTCATATCCACTT+CGG | - | chr2_1:7033516-7033535 | Msa0191420:intron | 40.0% | |
| AAAAGAGGGGTAGGAAAAAG+GGG | - | chr2_1:7033564-7033583 | Msa0191420:intron | 40.0% | |
| CTTGTGTTACCAGAAAATCG+TGG | + | chr2_1:7033604-7033623 | None:intergenic | 40.0% | |
| !! | CGATTTTCTGGTAACACAAG+TGG | - | chr2_1:7033604-7033623 | Msa0191420:intron | 40.0% |
| TACGTAGGGAAATCATGGAA+TGG | - | chr2_1:7033641-7033660 | Msa0191420:CDS | 40.0% | |
| ATGTTGTTGATCAGGTGGTA+CGG | + | chr2_1:7033718-7033737 | None:intergenic | 40.0% | |
| AATTGGCTGATCCTAGTTCC+TGG | - | chr2_1:7030694-7030713 | Msa0191420:three_prime_UTR | 45.0% | |
| TGCTTGGGACATGATTAGGA+GGG | + | chr2_1:7030896-7030915 | None:intergenic | 45.0% | |
| ATGCTTGGGACATGATTAGG+AGG | + | chr2_1:7030897-7030916 | None:intergenic | 45.0% | |
| CCTTCAATCACCACAATGCT+TGG | + | chr2_1:7030912-7030931 | None:intergenic | 45.0% | |
| ! | CCAAGCATTGTGGTGATTGA+AGG | - | chr2_1:7030909-7030928 | Msa0191420:three_prime_UTR | 45.0% |
| TTAGAACGTGTCCATGATGC+AGG | - | chr2_1:7031142-7031161 | Msa0191420:CDS | 45.0% | |
| TATGTTCACAGACAGGCTAC+AGG | + | chr2_1:7031407-7031426 | None:intergenic | 45.0% | |
| ! | ATTGTGTTGTTGCTCTCACC+TGG | - | chr2_1:7031810-7031829 | Msa0191420:CDS | 45.0% |
| GTGCACTTCTTCCAGCAAAA+TGG | - | chr2_1:7032153-7032172 | Msa0191420:intron | 45.0% | |
| GACTGACATGAAGCATGGTA+TGG | + | chr2_1:7032319-7032338 | None:intergenic | 45.0% | |
| TACCATGCTTCATGTCAGTC+AGG | - | chr2_1:7032319-7032338 | Msa0191420:intron | 45.0% | |
| ATCCTGACTGACATGAAGCA+TGG | + | chr2_1:7032324-7032343 | None:intergenic | 45.0% | |
| AAGAAGATCTGGCAGCAAAG+AGG | + | chr2_1:7032472-7032491 | None:intergenic | 45.0% | |
| TGCAGCTGAACAAGAAGATC+TGG | + | chr2_1:7032483-7032502 | None:intergenic | 45.0% | |
| GAAAATGAAGGCCACTAAGC+AGG | - | chr2_1:7032689-7032708 | Msa0191420:intron | 45.0% | |
| ATGATCAGGATCCTGCTTAG+TGG | + | chr2_1:7032703-7032722 | None:intergenic | 45.0% | |
| TCCTGATCATGCTGAAGCTT+TGG | - | chr2_1:7032713-7032732 | Msa0191420:intron | 45.0% | |
| TCCAAAGCTTCAGCATGATC+AGG | + | chr2_1:7032717-7032736 | None:intergenic | 45.0% | |
| ! | TGATCATGCTGAAGCTTTGG+AGG | - | chr2_1:7032716-7032735 | Msa0191420:intron | 45.0% |
| !! | GATCATGCTGAAGCTTTGGA+GGG | - | chr2_1:7032717-7032736 | Msa0191420:intron | 45.0% |
| TGCAAATCTAGCAATCCTGG+GGG | - | chr2_1:7032752-7032771 | Msa0191420:intron | 45.0% | |
| ATGTCGTGGGTGTTTAGTTG+TGG | + | chr2_1:7032805-7032824 | None:intergenic | 45.0% | |
| TGCATGTCTGCTTATGCTTG+GGG | + | chr2_1:7032878-7032897 | None:intergenic | 45.0% | |
| GTGCATGTCTGCTTATGCTT+GGG | + | chr2_1:7032879-7032898 | None:intergenic | 45.0% | |
| TGTGCATGTCTGCTTATGCT+TGG | + | chr2_1:7032880-7032899 | None:intergenic | 45.0% | |
| CTTCTCACGCCGTAACATAA+GGG | + | chr2_1:7032940-7032959 | None:intergenic | 45.0% | |
| TCTTCTCACGCCGTAACATA+AGG | + | chr2_1:7032941-7032960 | None:intergenic | 45.0% | |
| TTCAGATGAAGGCAGTTGCT+GGG | + | chr2_1:7033018-7033037 | None:intergenic | 45.0% | |
| TTTCAGATGAAGGCAGTTGC+TGG | + | chr2_1:7033019-7033038 | None:intergenic | 45.0% | |
| TAGTAGCCCAACCATGAACA+AGG | - | chr2_1:7033082-7033101 | Msa0191420:intron | 45.0% | |
| TACCCTCCTTGTTCATGGTT+GGG | + | chr2_1:7033091-7033110 | None:intergenic | 45.0% | |
| TTACCCTCCTTGTTCATGGT+TGG | + | chr2_1:7033092-7033111 | None:intergenic | 45.0% | |
| ! | GTTCTGATGATGATCCTCAC+CGG | - | chr2_1:7033117-7033136 | Msa0191420:intron | 45.0% |
| ! | ACGGATGATTTTATCCGGTG+AGG | + | chr2_1:7033134-7033153 | None:intergenic | 45.0% |
| GACAATTCTTCTTCTCGCTC+TGG | + | chr2_1:7033194-7033213 | None:intergenic | 45.0% | |
| CAGCAGACTTTGTTGAACTC+TGG | - | chr2_1:7033284-7033303 | Msa0191420:intron | 45.0% | |
| ! | TCTGGTACTGGAGATTCATC+AGG | - | chr2_1:7033302-7033321 | Msa0191420:intron | 45.0% |
| AGGGAAGTGAAGCTTAGCAA+CGG | - | chr2_1:7033356-7033375 | Msa0191420:intron | 45.0% | |
| GCCGAAGTGGATATGAACTA+CGG | + | chr2_1:7033520-7033539 | None:intergenic | 45.0% | |
| TGAATAGTAAGACGCCGAAG+TGG | + | chr2_1:7033533-7033552 | None:intergenic | 45.0% | |
| TCATGGAATGGAGCTGAATG+AGG | - | chr2_1:7033653-7033672 | Msa0191420:CDS | 45.0% | |
| AATGGAGCTGAATGAGGTAG+TGG | - | chr2_1:7033659-7033678 | Msa0191420:CDS | 45.0% | |
| ATGGAGCTGAATGAGGTAGT+GGG | - | chr2_1:7033660-7033679 | Msa0191420:CDS | 45.0% | |
| !!! | TTTTTTGTATTATTTTTATA+TGG | - | chr2_1:7031699-7031718 | Msa0191420:CDS | 5.0% |
| CTTGGGACATGATTAGGAGG+GGG | + | chr2_1:7030894-7030913 | None:intergenic | 50.0% | |
| GCTTGGGACATGATTAGGAG+GGG | + | chr2_1:7030895-7030914 | None:intergenic | 50.0% | |
| GCGAGGACGAAGGATTGTTT+GGG | + | chr2_1:7031381-7031400 | None:intergenic | 50.0% | |
| TTCACAGACAGGCTACAGGA+TGG | + | chr2_1:7031403-7031422 | None:intergenic | 50.0% | |
| ATAGATGGCTTCCCAAGCAC+CGG | + | chr2_1:7031589-7031608 | None:intergenic | 50.0% | |
| GGATCACTCTCGTACCTTTC+TGG | + | chr2_1:7032203-7032222 | None:intergenic | 50.0% | |
| AATCTAGCAATCCTGGGGGA+AGG | - | chr2_1:7032756-7032775 | Msa0191420:intron | 50.0% | |
| ATCTAGCAATCCTGGGGGAA+GGG | - | chr2_1:7032757-7032776 | Msa0191420:intron | 50.0% | |
| TAGTTGTGGCCTGGGAAGAT+GGG | + | chr2_1:7032791-7032810 | None:intergenic | 50.0% | |
| TTAGTTGTGGCCTGGGAAGA+TGG | + | chr2_1:7032792-7032811 | None:intergenic | 50.0% | |
| TGGGTGTTTAGTTGTGGCCT+GGG | + | chr2_1:7032799-7032818 | None:intergenic | 50.0% | |
| AAACACCCACGACATAGACC+CGG | - | chr2_1:7032810-7032829 | Msa0191420:intron | 50.0% | |
| CAAACAATGCAAGAGCAGCC+GGG | + | chr2_1:7032831-7032850 | None:intergenic | 50.0% | |
| GCAAACAATGCAAGAGCAGC+CGG | + | chr2_1:7032832-7032851 | None:intergenic | 50.0% | |
| CACGCCGTAACATAAGGGTA+CGG | + | chr2_1:7032935-7032954 | None:intergenic | 50.0% | |
| TAGCCCAACCATGAACAAGG+AGG | - | chr2_1:7033085-7033104 | Msa0191420:intron | 50.0% | |
| AGCCCAACCATGAACAAGGA+GGG | - | chr2_1:7033086-7033105 | Msa0191420:intron | 50.0% | |
| ATTCTTCTTCTCGCTCTGGC+TGG | + | chr2_1:7033190-7033209 | None:intergenic | 50.0% | |
| CGAGAAGAAGAATTGTCGCC+TGG | - | chr2_1:7033197-7033216 | Msa0191420:intron | 50.0% | |
| TTGTCGCCTGGTTCAGATTC+TGG | - | chr2_1:7033209-7033228 | Msa0191420:intron | 50.0% | |
| ACACCACCAGAATCTGAACC+AGG | + | chr2_1:7033218-7033237 | None:intergenic | 50.0% | |
| ACATTTCAGCAGCAGCATCG+TGG | + | chr2_1:7033253-7033272 | None:intergenic | 50.0% | |
| ATCAGGTAGTCAGTCACAGC+AGG | - | chr2_1:7033319-7033338 | Msa0191420:intron | 50.0% | |
| AGCAGGTAGGAGATGTTGTG+AGG | - | chr2_1:7033336-7033355 | Msa0191420:intron | 50.0% | |
| GCAGGTAGGAGATGTTGTGA+GGG | - | chr2_1:7033337-7033356 | Msa0191420:intron | 50.0% | |
| AGGGGTAGGAAAAAGGGGAA+TGG | - | chr2_1:7033569-7033588 | Msa0191420:intron | 50.0% | |
| GGGGTAGGAAAAAGGGGAAT+GGG | - | chr2_1:7033570-7033589 | Msa0191420:intron | 50.0% | |
| GGTACGGTGAGCTCTCAAAA+AGG | + | chr2_1:7033702-7033721 | None:intergenic | 50.0% | |
| GGCGAGGACGAAGGATTGTT+TGG | + | chr2_1:7031382-7031401 | None:intergenic | 55.0% | |
| TTACAGGATGCTCCGGTGCT+TGG | - | chr2_1:7031574-7031593 | Msa0191420:CDS | 55.0% | |
| TACAGGATGCTCCGGTGCTT+GGG | - | chr2_1:7031575-7031594 | Msa0191420:CDS | 55.0% | |
| ! | GCTGGAAGAAGTGCACATGC+TGG | + | chr2_1:7032149-7032168 | None:intergenic | 55.0% |
| TCTAGCAATCCTGGGGGAAG+GGG | - | chr2_1:7032758-7032777 | Msa0191420:intron | 55.0% | |
| GTGGGTGTTTAGTTGTGGCC+TGG | + | chr2_1:7032800-7032819 | None:intergenic | 55.0% | |
| ATCCAGCCGCCTAGTGGAAA+GGG | - | chr2_1:7032852-7032871 | Msa0191420:intron | 55.0% | |
| TCGCCTGGTTCAGATTCTGG+TGG | - | chr2_1:7033212-7033231 | Msa0191420:intron | 55.0% | |
| GGTAGTCAGTCACAGCAGGT+AGG | - | chr2_1:7033323-7033342 | Msa0191420:intron | 55.0% | |
| GATTAGGAGGGGGACGAAGC+AGG | + | chr2_1:7030884-7030903 | None:intergenic | 60.0% | |
| CTACAGGATGGCGAGGACGA+AGG | + | chr2_1:7031391-7031410 | None:intergenic | 60.0% | |
| AGACAGGCTACAGGATGGCG+AGG | + | chr2_1:7031398-7031417 | None:intergenic | 60.0% | |
| AGCAGCCGGGTCTATGTCGT+GGG | + | chr2_1:7032818-7032837 | None:intergenic | 60.0% | |
| GTTTGCATCCAGCCGCCTAG+TGG | - | chr2_1:7032846-7032865 | Msa0191420:intron | 60.0% | |
| CATCCAGCCGCCTAGTGGAA+AGG | - | chr2_1:7032851-7032870 | Msa0191420:intron | 60.0% | |
| TTGGGGCCCTTTCCACTAGG+CGG | + | chr2_1:7032861-7032880 | None:intergenic | 60.0% | |
| TGCTTGGGGCCCTTTCCACT+AGG | + | chr2_1:7032864-7032883 | None:intergenic | 60.0% | |
| AGCAATCCTGGGGGAAGGGG+AGG | - | chr2_1:7032761-7032780 | Msa0191420:intron | 65.0% | |
| GGAGGCTCTCCCATCTTCCC+AGG | - | chr2_1:7032779-7032798 | Msa0191420:intron | 65.0% | |
| GAGCAGCCGGGTCTATGTCG+TGG | + | chr2_1:7032819-7032838 | None:intergenic | 65.0% | |
| GGCCCTTTCCACTAGGCGGC+TGG | + | chr2_1:7032857-7032876 | None:intergenic | 70.0% | |
| GGAGAGCCTCCCCTTCCCCC+AGG | + | chr2_1:7032770-7032789 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 7030690 | 7033872 | 7030690 | ID=Msa0191420;Name=Msa0191420 |
| chr2_1 | mRNA | 7030690 | 7033872 | 7030690 | ID=Msa0191420-mRNA-1;Parent=Msa0191420;Name=Msa0191420-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.75|0.8|1|1|1|5|424|422 |
| chr2_1 | exon | 7030690 | 7031883 | 7030690 | ID=Msa0191420-mRNA-1:exon:3214;Parent=Msa0191420-mRNA-1 |
| chr2_1 | exon | 7032008 | 7032078 | 7032008 | ID=Msa0191420-mRNA-1:exon:3213;Parent=Msa0191420-mRNA-1 |
| chr2_1 | exon | 7032355 | 7032468 | 7032355 | ID=Msa0191420-mRNA-1:exon:3212;Parent=Msa0191420-mRNA-1 |
| chr2_1 | exon | 7032933 | 7032982 | 7032933 | ID=Msa0191420-mRNA-1:exon:3211;Parent=Msa0191420-mRNA-1 |
| chr2_1 | exon | 7033609 | 7033872 | 7033609 | ID=Msa0191420-mRNA-1:exon:3210;Parent=Msa0191420-mRNA-1 |
| chr2_1 | CDS | 7033609 | 7033872 | 7033609 | ID=Msa0191420-mRNA-1:cds;Parent=Msa0191420-mRNA-1 |
| chr2_1 | CDS | 7032933 | 7032982 | 7032933 | ID=Msa0191420-mRNA-1:cds;Parent=Msa0191420-mRNA-1 |
| chr2_1 | CDS | 7032355 | 7032468 | 7032355 | ID=Msa0191420-mRNA-1:cds;Parent=Msa0191420-mRNA-1 |
| chr2_1 | CDS | 7032008 | 7032078 | 7032008 | ID=Msa0191420-mRNA-1:cds;Parent=Msa0191420-mRNA-1 |
| chr2_1 | CDS | 7031114 | 7031883 | 7031114 | ID=Msa0191420-mRNA-1:cds;Parent=Msa0191420-mRNA-1 |
| chr2_1 | three_prime_UTR | 7030690 | 7031113 | 7030690 | ID=Msa0191420-mRNA-1:three_prime_utr;Parent=Msa0191420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
