AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0197120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0197120 MtrunA17_Chr2g0289221 91.277 321 27 1 1 320 1 321 0.0 615
Msa0197120 MtrunA17_Chr5g0417281 58.949 514 192 9 13 510 4 514 0.0 556
Msa0197120 MtrunA17_Chr5g0436761 53.678 503 182 7 9 505 1 458 4.11e-176 503
Msa0197120 MtrunA17_Chr5g0417211 52.860 507 132 9 9 510 1 405 1.62e-163 469
Msa0197120 MtrunA17_Chr5g0424931 49.815 542 213 13 7 510 6 526 3.87e-162 470
Msa0197120 MtrunA17_Chr1g0178011 45.187 509 198 14 9 503 1 442 2.58e-130 386
Msa0197120 MtrunA17_Chr2g0277461 45.059 506 208 11 13 509 6 450 8.45e-127 377
Msa0197120 MtrunA17_Chr3g0115271 42.576 559 253 13 10 510 9 557 4.86e-123 372
Msa0197120 MtrunA17_Chr5g0425261 47.643 403 165 16 9 392 1 376 9.76e-99 303
Msa0197120 MtrunA17_Chr5g0424801 50.142 351 141 13 9 340 1 336 1.02e-97 300
Msa0197120 MtrunA17_Chr5g0424741 40.338 533 224 19 9 463 1 517 2.38e-96 301
Msa0197120 MtrunA17_Chr2g0277531 48.408 314 146 10 14 320 14 318 1.37e-88 274
Msa0197120 MtrunA17_Chr2g0326761 39.901 406 169 11 17 361 8 399 4.53e-86 279
Msa0197120 MtrunA17_Chr1g0181211 39.901 406 175 10 17 360 24 422 1.66e-84 275
Msa0197120 MtrunA17_Chr4g0028971 39.078 412 180 10 9 358 1 403 3.35e-83 272
Msa0197120 MtrunA17_Chr1g0199681 35.225 511 246 14 17 463 91 580 5.17e-82 268
Msa0197120 MtrunA17_Chr7g0264171 37.019 416 178 12 17 361 28 430 1.33e-75 249
Msa0197120 MtrunA17_Chr7g0264161 40.635 315 148 10 30 320 2 301 5.48e-64 210
Msa0197120 MtrunA17_Chr5g0425661 53.061 196 86 2 20 213 37 228 2.66e-63 206
Msa0197120 MtrunA17_Chr2g0282961 35.696 381 206 12 11 365 45 412 1.95e-58 204
Msa0197120 MtrunA17_Chr4g0046371 31.798 456 256 13 20 445 38 468 2.66e-55 197
Msa0197120 MtrunA17_Chr2g0276781 35.694 353 195 12 20 350 23 365 1.22e-51 186
Msa0197120 MtrunA17_Chr8g0385791 34.444 360 210 10 20 359 59 412 3.78e-50 184
Msa0197120 MtrunA17_Chr4g0009751 32.869 359 213 10 20 358 19 369 2.45e-49 179
Msa0197120 MtrunA17_Chr8g0346711 34.722 360 203 12 20 358 29 377 7.09e-49 179
Msa0197120 MtrunA17_Chr2g0285461 32.514 366 203 12 11 345 11 363 8.30e-49 180
Msa0197120 MtrunA17_Chr2g0326281 30.501 459 242 15 20 415 56 500 2.15e-48 179
Msa0197120 MtrunA17_Chr7g0239061 33.240 358 212 12 20 358 14 363 7.06e-48 176
Msa0197120 MtrunA17_Chr2g0301251 31.268 355 197 11 17 341 20 357 2.08e-47 177
Msa0197120 MtrunA17_Chr4g0029671 32.967 364 215 8 20 358 54 413 4.97e-47 174
Msa0197120 MtrunA17_Chr5g0433301 32.386 352 201 10 20 345 24 364 9.12e-47 174
Msa0197120 MtrunA17_Chr4g0070181 31.445 353 195 11 17 339 20 355 1.12e-46 174
Msa0197120 MtrunA17_Chr3g0109391 32.102 352 202 10 20 345 26 366 1.15e-45 171
Msa0197120 MtrunA17_Chr8g0376771 32.615 371 195 15 11 345 11 362 1.37e-45 171
Msa0197120 MtrunA17_Chr1g0156321 34.957 349 183 15 20 339 43 376 1.39e-45 171
Msa0197120 MtrunA17_Chr8g0389081 31.268 355 201 12 17 342 29 369 7.39e-44 166
Msa0197120 MtrunA17_Chr5g0424791 44.000 150 72 6 71 219 13 151 1.06e-23 97.1
Msa0197120 MtrunA17_Chr5g0425651 49.558 113 49 6 238 343 1 112 2.75e-23 95.1
Msa0197120 MtrunA17_Chr8g0356211 27.354 223 145 5 130 339 2 220 6.14e-23 99.4
Msa0197120 MtrunA17_Chr5g0419861 42.623 122 64 2 52 170 5 123 2.04e-18 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0197120 AT1G77850.1 37.316 544 264 17 9 488 1 531 5.14e-99 310
Msa0197120 AT1G77850.2 37.316 544 264 17 9 488 1 531 5.32e-99 311
Msa0197120 AT4G30080.1 39.906 426 175 14 17 379 16 423 3.17e-82 269
Msa0197120 AT2G28350.2 38.462 416 179 12 13 363 3 406 4.01e-79 261
Msa0197120 AT2G28350.1 38.462 416 179 12 13 363 3 406 4.55e-79 261
Msa0197120 AT2G46530.1 35.616 365 196 15 20 358 21 372 5.48e-54 192
Msa0197120 AT2G46530.3 35.616 365 196 15 20 358 42 393 8.34e-54 192
Msa0197120 AT3G61830.1 35.882 340 188 13 20 339 25 354 3.36e-53 190
Msa0197120 AT1G35520.1 35.509 383 214 14 3 365 10 379 4.51e-52 186
Msa0197120 AT4G23980.2 33.628 339 198 9 20 339 12 342 4.35e-51 184
Msa0197120 AT4G23980.1 33.628 339 198 9 20 339 12 342 5.04e-51 184
Msa0197120 AT1G34390.1 35.638 376 207 16 3 358 10 370 1.01e-50 183
Msa0197120 AT5G37020.2 33.523 352 197 10 20 345 22 362 1.08e-50 185
Msa0197120 AT5G37020.1 33.523 352 197 10 20 345 22 362 1.30e-50 185
Msa0197120 AT1G34310.1 35.000 380 206 14 3 358 10 372 1.74e-50 182
Msa0197120 AT1G34410.1 33.943 383 220 13 3 365 10 379 2.02e-50 182
Msa0197120 AT2G33860.1 34.493 345 191 10 20 339 54 388 4.95e-50 181
Msa0197120 AT5G62000.2 33.705 359 212 10 20 358 61 413 4.00e-49 181
Msa0197120 AT5G62000.5 33.705 359 212 10 20 358 61 413 4.00e-49 181
Msa0197120 AT5G62000.3 33.705 359 212 10 20 358 61 413 4.00e-49 181
Msa0197120 AT5G62000.1 33.705 359 212 10 20 358 61 413 4.00e-49 181
Msa0197120 AT5G62000.4 33.705 359 212 10 20 358 61 413 4.62e-49 181
Msa0197120 AT1G35540.1 33.898 354 206 12 3 339 10 352 5.62e-49 178
Msa0197120 AT1G59750.4 34.211 342 193 11 20 339 22 353 6.41e-49 179
Msa0197120 AT1G59750.2 34.211 342 193 11 20 339 22 353 6.90e-49 179
Msa0197120 AT1G59750.1 34.211 342 193 11 20 339 22 353 8.05e-49 179
Msa0197120 AT1G59750.3 34.211 342 193 11 20 339 22 353 8.05e-49 179
Msa0197120 AT5G60450.2 34.595 370 208 13 15 356 36 399 2.79e-48 178
Msa0197120 AT5G60450.1 34.795 365 204 13 20 356 65 423 6.12e-48 177
Msa0197120 AT1G35240.1 34.225 374 217 13 3 358 10 372 6.17e-48 175
Msa0197120 AT1G30330.1 32.603 365 204 11 12 345 10 363 1.17e-47 177
Msa0197120 AT1G30330.3 32.425 367 204 11 12 345 10 365 3.10e-47 176
Msa0197120 AT1G30330.2 32.425 367 204 11 12 345 10 365 3.10e-47 176
Msa0197120 AT1G19850.2 34.262 359 179 12 17 339 40 377 3.85e-46 173
Msa0197120 AT1G19850.1 34.262 359 179 12 17 339 51 388 4.90e-46 172
Msa0197120 AT5G20730.3 30.878 353 198 10 17 339 21 357 3.99e-44 167
Msa0197120 AT5G20730.1 30.704 355 200 10 17 341 21 359 4.45e-44 167
Msa0197120 AT1G19220.1 31.461 356 195 11 17 341 20 357 5.74e-44 167
Msa0197120 AT5G20730.2 30.704 355 199 11 17 341 21 358 7.02e-43 164
Msa0197120 AT1G34170.1 29.487 468 274 18 20 456 25 467 2.50e-42 158
Msa0197120 AT3G61830.2 36.842 285 154 11 72 339 28 303 3.51e-42 158
Msa0197120 AT2G46530.2 37.638 271 142 11 106 358 24 285 5.66e-40 152
Msa0197120 AT2G33860.2 37.931 232 124 7 124 339 4 231 7.59e-40 150
Msa0197120 AT5G37020.3 35.685 241 130 8 124 345 33 267 1.84e-37 147
Msa0197120 AT1G34170.2 28.758 459 263 18 20 456 25 441 1.44e-36 141
Msa0197120 AT1G34170.3 28.667 450 258 17 20 448 25 432 9.85e-36 140
Msa0197120 AT1G43950.1 36.522 230 121 7 2 222 9 222 1.37e-31 121
Msa0197120 ATMG00940.1 38.679 106 60 3 211 316 44 144 3.81e-13 67.8
Msa0197120 AT4G01500.1 30.597 134 90 1 124 257 38 168 2.96e-11 65.5

Find 138 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGGTTCATTTATGCTATT+TGG 0.105998 2_1:+14786439 Msa0197120:CDS
AACATTAGCACATCTATATT+TGG 0.209645 2_1:+14786328 Msa0197120:CDS
AATATATATTATAGGTTAAC+TGG 0.211032 2_1:+14785951 Msa0197120:intron
GGAGACATGGCGGAAATATT+TGG 0.255210 2_1:-14784035 None:intergenic
CTTCCAACTCTTTCAATGAT+AGG 0.271660 2_1:+14786245 Msa0197120:CDS
TTCTTTGGTGCTGCACTTGT+GGG 0.284414 2_1:-14786410 None:intergenic
TGAACCAGGATTAACTTCTT+TGG 0.304162 2_1:-14786425 None:intergenic
AGGGATAGGGTTTCAGTGTT+GGG 0.310433 2_1:-14784188 None:intergenic
ACCTCCCAAGGGCTTTGCTT+TGG 0.312781 2_1:-14785998 None:intergenic
GACACCTGATCACCACTAAT+TGG 0.319561 2_1:+14784576 Msa0197120:CDS
GAGCAGCACCGCCAAATCTT+TGG 0.321198 2_1:-14784080 None:intergenic
CCGACGTTCATGGCAAAGTC+TGG 0.342190 2_1:+14784519 Msa0197120:CDS
TACAATTGCCCTCAGCAAAA+AGG 0.346652 2_1:+14786053 Msa0197120:CDS
TTTGGATTATGTGAGACTTC+AGG 0.376866 2_1:-14785980 None:intergenic
AGGATGCAATGAAGATTAAC+TGG 0.377747 2_1:+14784840 Msa0197120:CDS
AATCTTTGGTTCTACACGGC+TGG 0.380640 2_1:-14784066 None:intergenic
ATCCGTCGGCATACTAAGTT+TGG 0.389012 2_1:+14784686 Msa0197120:CDS
CTTCTTTGGTGCTGCACTTG+TGG 0.393725 2_1:-14786411 None:intergenic
CCCTTTGAGACAAAGTTTGA+CGG 0.397840 2_1:+14786385 Msa0197120:CDS
AATATAGATGTGCTAATGTT+TGG 0.410256 2_1:-14786325 None:intergenic
AAAATCCTTGAATACATTGT+TGG 0.413811 2_1:+14786159 Msa0197120:CDS
CTGTCTGTTACCGACGTTCA+TGG 0.414559 2_1:+14784509 Msa0197120:CDS
CACCGTTATTAGCATCAGAT+AGG 0.414739 2_1:-14784406 None:intergenic
CCGTCAAACTTTGTCTCAAA+GGG 0.416058 2_1:-14786385 None:intergenic
GGTGATGAAATTGTTTCCTC+TGG 0.421466 2_1:+14784371 Msa0197120:CDS
AAGATTTGGCGGTGCTGCTC+CGG 0.422842 2_1:+14784083 Msa0197120:CDS
GGGATAGGGTTTCAGTGTTG+GGG 0.425954 2_1:-14784187 None:intergenic
GCCGTGTAGAACCAAAGATT+TGG 0.431938 2_1:+14784069 Msa0197120:CDS
TACTCCAATTAGTGGTGATC+AGG 0.433415 2_1:-14784580 None:intergenic
AGCATGCGCCATGGACGATT+AGG 0.434996 2_1:-14784956 None:intergenic
TCATCTGGAGATATGTTTGT+TGG 0.440275 2_1:+14784662 Msa0197120:CDS
GAAACCCTATCCCTTCTTGA+TGG 0.440854 2_1:+14784197 Msa0197120:CDS
ACAATCCAACAATGTATTCA+AGG 0.441558 2_1:-14786164 None:intergenic
AACCATCAGTGATGGGAGTT+AGG 0.442469 2_1:-14784304 None:intergenic
CATGTTCTAAGTGACCTTGC+GGG 0.450390 2_1:-14784151 None:intergenic
CAAGGGAGAAGATGGTTGTA+TGG 0.451305 2_1:+14786507 Msa0197120:CDS
ATCTTTGGTTCTACACGGCT+GGG 0.452340 2_1:-14784065 None:intergenic
CACGAACTTACTCCAATTAG+TGG 0.453246 2_1:-14784588 None:intergenic
GGTTATGGCGGCAGCGGAGT+TGG 0.455795 2_1:+14784733 Msa0197120:CDS
GAGATGGCTGTTTAGTTTCG+AGG 0.456957 2_1:-14784481 None:intergenic
AAGGGATAGGGTTTCAGTGT+TGG 0.458344 2_1:-14784189 None:intergenic
TCATGCAAATTACTTCCAAC+AGG 0.463742 2_1:-14786475 None:intergenic
TTCAAAATGCTATGGTTAAG+AGG 0.466292 2_1:-14786361 None:intergenic
GATAACTAAAGAATCGGTTA+TGG 0.468357 2_1:+14784718 Msa0197120:CDS
GGTTCTACACGGCTGGGTTG+TGG 0.468361 2_1:-14784059 None:intergenic
TTTCAATCCTTGCATTGTAT+CGG 0.468436 2_1:+14784229 Msa0197120:CDS
GAGTATTATCCTACGATTGA+AGG 0.470883 2_1:+14784782 Msa0197120:CDS
TTCCAACTCTTTCAATGATA+GGG 0.473757 2_1:+14786246 Msa0197120:CDS
ACAAAGACTTCATCAGTATG+AGG 0.479542 2_1:-14784272 None:intergenic
GATAGGGTTTCAGTGTTGGG+GGG 0.483168 2_1:-14784185 None:intergenic
ACCGTCAAACTTTGTCTCAA+AGG 0.497762 2_1:-14786386 None:intergenic
CATTGCATCCTCAACAACCT+TGG 0.498204 2_1:-14784828 None:intergenic
GGATAGGGTTTCAGTGTTGG+GGG 0.498312 2_1:-14784186 None:intergenic
AGAATCGGTTATGGCGGCAG+CGG 0.500580 2_1:+14784727 Msa0197120:CDS
GGCCCTATCATTGAAAGAGT+TGG 0.504567 2_1:-14786248 None:intergenic
CTGGAAATCTATCATTGGAA+TGG 0.511209 2_1:-14786125 None:intergenic
TCTGCTACCAAGGGAGAAGA+TGG 0.513250 2_1:+14786499 Msa0197120:CDS
GAATGCTGGAAATCTATCAT+TGG 0.515653 2_1:-14786130 None:intergenic
GAAATATTTGGTTCTACCAT+CGG 0.518665 2_1:-14784023 None:intergenic
TGCTAAGATAACTAAAGAAT+CGG 0.520496 2_1:+14784712 Msa0197120:CDS
CGTGACCATCAAGAAGGGAT+AGG 0.523750 2_1:-14784202 None:intergenic
TCTCTCTATATTATCTAATG+AGG 0.525248 2_1:-14786098 None:intergenic
TTTGCATGATTCTGCTACCA+AGG 0.526896 2_1:+14786489 Msa0197120:CDS
GCTGGGTTGTGGTGGAGACA+TGG 0.530128 2_1:-14784048 None:intergenic
ATATTATAGGTTAACTGGGA+TGG 0.530339 2_1:+14785956 Msa0197120:intron
AGTGGTGATCAGGTGTCTCA+AGG 0.534349 2_1:-14784570 None:intergenic
TAATCCAAAGCAAAGCCCTT+GGG 0.536094 2_1:+14785994 Msa0197120:CDS
GTATGGGCTGCAATAATTGA+AGG 0.536513 2_1:+14786524 Msa0197120:CDS
GAAATTAGTTCAACCTCCCA+AGG 0.540471 2_1:-14786010 None:intergenic
TATGGCGGCAGCGGAGTTGG+CGG 0.543054 2_1:+14784736 Msa0197120:CDS
ATGAAGATTAACTGGAATTG+TGG 0.543117 2_1:+14784848 Msa0197120:CDS
CACTAATTGGAGTAAGTTCG+TGG 0.543836 2_1:+14784589 Msa0197120:CDS
GATACAATGCAAGGATTGAA+AGG 0.544112 2_1:-14784227 None:intergenic
CAAAGGGGTTCAAAATGCTA+TGG 0.546020 2_1:-14786369 None:intergenic
CTCCTAACTCCCATCACTGA+TGG 0.547018 2_1:+14784302 Msa0197120:CDS
ATAATCCAAAGCAAAGCCCT+TGG 0.548641 2_1:+14785993 Msa0197120:CDS
CATACAACCATCTTCTCCCT+TGG 0.552659 2_1:-14786506 None:intergenic
TCGTCCATGGCGCATGCTTG+AGG 0.553392 2_1:+14784961 Msa0197120:CDS
ACCGTTATTAGCATCAGATA+GGG 0.553783 2_1:-14784405 None:intergenic
TCTTCACGAACCTCAGTAGG+AGG 0.555844 2_1:-14784338 None:intergenic
TCTCTGCTCCTAATCGTCCA+TGG 0.557073 2_1:+14784948 Msa0197120:CDS
TTGCATGATTCTGCTACCAA+GGG 0.558661 2_1:+14786490 Msa0197120:CDS
TCTTTGGTGCTGCACTTGTG+GGG 0.558880 2_1:-14786409 None:intergenic
ATGATGATTATTCAAAGAGA+TGG 0.559089 2_1:+14784897 Msa0197120:CDS
GTGTAGAACCAAAGATTTGG+CGG 0.559765 2_1:+14784072 Msa0197120:CDS
GGCAATTGTAGATTCAGTGC+AGG 0.560065 2_1:-14786040 None:intergenic
ACCCTATCTGATGCTAATAA+CGG 0.564674 2_1:+14784404 Msa0197120:CDS
TCCTACTGAGGTTCGTGAAG+AGG 0.565181 2_1:+14784340 Msa0197120:CDS
AGTATTATCCTACGATTGAA+GGG 0.565286 2_1:+14784783 Msa0197120:CDS
AAGGGAGAAGATGGTTGTAT+GGG 0.567406 2_1:+14786508 Msa0197120:CDS
GGTGGATGCCAAGGTTGTTG+AGG 0.569678 2_1:+14784820 Msa0197120:CDS
TCACAAAACCCTTCAATCGT+AGG 0.570407 2_1:-14784791 None:intergenic
GTGAACACAACCATCAGTGA+TGG 0.572216 2_1:-14784312 None:intergenic
CGACGTTCATGGCAAAGTCT+GGG 0.573902 2_1:+14784520 Msa0197120:CDS
CCAAATAGCATAAATGAACC+AGG 0.581265 2_1:-14786439 None:intergenic
AGCACCAAAGAAGTTAATCC+TGG 0.583231 2_1:+14786421 Msa0197120:CDS
AAAGTTTACTATTTCCCGCA+AGG 0.585623 2_1:+14784137 Msa0197120:CDS
GTGACCATCAAGAAGGGATA+GGG 0.586087 2_1:-14784201 None:intergenic
ATATGTTTGTTGGAATCCGT+CGG 0.586941 2_1:+14784672 Msa0197120:CDS
GTTCGTGAAGAGGAACCTAC+AGG 0.587140 2_1:+14784350 Msa0197120:CDS
TCTACACGGCTGGGTTGTGG+TGG 0.587866 2_1:-14784056 None:intergenic
GTGGTGATCAGGTGTCTCAA+GGG 0.590017 2_1:-14784569 None:intergenic
TGTTCACAAACCTCCTACTG+AGG 0.591520 2_1:+14784328 Msa0197120:CDS
AACTAAAGAATCGGTTATGG+CGG 0.592037 2_1:+14784721 Msa0197120:CDS
GACTTCATCAGTATGAGGAT+CGG 0.593232 2_1:-14784267 None:intergenic
GAAACAATTTCATCACCTGT+AGG 0.594064 2_1:-14784365 None:intergenic
ATATATATTATAGGTTAACT+GGG 0.595356 2_1:+14785952 Msa0197120:intron
AGGGAGTTCCACGGTAGACA+TGG 0.596664 2_1:-14784550 None:intergenic
CTATCCCTTCTTGATGGTCA+CGG 0.597434 2_1:+14784203 Msa0197120:CDS
AAGGACCGTGACCATCAAGA+AGG 0.601243 2_1:-14784208 None:intergenic
TGTTTAGTTTCGAGGTCAAG+CGG 0.603245 2_1:-14784473 None:intergenic
GGTAAGATGATACATCCTGT+TGG 0.604159 2_1:+14786460 Msa0197120:CDS
TAGTTTCGAGGTCAAGCGGT+GGG 0.611231 2_1:-14784469 None:intergenic
TGAACACAACCATCAGTGAT+GGG 0.614197 2_1:-14784311 None:intergenic
GCATGTTCTAAGTGACCTTG+CGG 0.616291 2_1:-14784152 None:intergenic
GCCAAATCTTTGGTTCTACA+CGG 0.618346 2_1:-14784070 None:intergenic
ATTGATGTCGCGCAAGAACG+AGG 0.619010 2_1:-14784443 None:intergenic
TCCTCTTCACGAACCTCAGT+AGG 0.621000 2_1:-14784341 None:intergenic
AGAGTTGGAAGTAGTTCCTG+TGG 0.623129 2_1:-14786233 None:intergenic
TATACCTCAAGCATGCGCCA+TGG 0.631418 2_1:-14784965 None:intergenic
TCCAAAGCAAAGCCCTTGGG+AGG 0.633549 2_1:+14785997 Msa0197120:CDS
AAATTAGTTCAACCTCCCAA+GGG 0.635245 2_1:-14786009 None:intergenic
CACCAAACTTAGTATGCCGA+CGG 0.637276 2_1:-14784688 None:intergenic
GTAACAGACAGTTCTTGAGA+TGG 0.639997 2_1:-14784497 None:intergenic
AGGACCGTGACCATCAAGAA+GGG 0.643039 2_1:-14784207 None:intergenic
AAAAGGCTTAGAGTTGCTCA+GGG 0.650442 2_1:+14786070 Msa0197120:CDS
TGTCGCGCAAGAACGAGGTA+CGG 0.658162 2_1:-14784438 None:intergenic
GACGAAAAGAAACTCGTCTG+CGG 0.661354 2_1:+14784611 Msa0197120:CDS
GGGTTGTGGTGGAGACATGG+CGG 0.664200 2_1:-14784045 None:intergenic
GAGTTTCGCCATGTCTACCG+TGG 0.667413 2_1:+14784542 Msa0197120:CDS
CGTCAAACTTTGTCTCAAAG+GGG 0.667527 2_1:-14786384 None:intergenic
TCAACGGCCGATACAATGCA+AGG 0.667965 2_1:-14784236 None:intergenic
AGGATCGGCGAGGTAATCAA+CGG 0.669436 2_1:-14784252 None:intergenic
GGTGTCTCAAGGGAGTTCCA+CGG 0.685317 2_1:-14784559 None:intergenic
CCAGACTTTGCCATGAACGT+CGG 0.685939 2_1:-14784519 None:intergenic
CTATCTGATGCTAATAACGG+TGG 0.699278 2_1:+14784407 Msa0197120:CDS
TTAGTTTCGAGGTCAAGCGG+TGG 0.704813 2_1:-14784470 None:intergenic
CATCAGTATGAGGATCGGCG+AGG 0.728455 2_1:-14784262 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACATATATGTAAACAAA+CGG - chr2_1:14785653-14785672 None:intergenic 15.0%
!! ATCATATAAATGATTAATGT+TGG + chr2_1:14785907-14785926 Msa0197120:intron 15.0%
!! TTCATCTCAATATATATTAT+AGG + chr2_1:14785943-14785962 Msa0197120:intron 15.0%
!! AATATATATTATAGGTTAAC+TGG + chr2_1:14785951-14785970 Msa0197120:intron 15.0%
!! ATATATATTATAGGTTAACT+GGG + chr2_1:14785952-14785971 Msa0197120:intron 15.0%
!!! TAAACTTTTGAATGAAGTTT+AGG - chr2_1:14784125-14784144 None:intergenic 20.0%
!! TTTATGAAAAAGAAATCATC+TGG + chr2_1:14784647-14784666 Msa0197120:CDS 20.0%
!! TTATGAACAATTATATGCAA+AGG + chr2_1:14785154-14785173 Msa0197120:intron 20.0%
!! AAAAACAACAACGATATATT+GGG - chr2_1:14785429-14785448 None:intergenic 20.0%
!! AAAAAACAACAACGATATAT+TGG - chr2_1:14785430-14785449 None:intergenic 20.0%
!!! TTTCTAAAAAAACAAGCAAA+TGG - chr2_1:14785476-14785495 None:intergenic 20.0%
!! TAAAATCAATGAAGTTAATG+TGG - chr2_1:14785566-14785585 None:intergenic 20.0%
!! AATTATTTCAGAAGTTGAAA+TGG + chr2_1:14785609-14785628 Msa0197120:intron 20.0%
!! ATTATTTCAGAAGTTGAAAT+GGG + chr2_1:14785610-14785629 Msa0197120:intron 20.0%
!! GTTAAAATTAATATCCTACT+TGG - chr2_1:14785828-14785847 None:intergenic 20.0%
!! TATGTATCTATATAAGTCAA+TGG - chr2_1:14785876-14785895 None:intergenic 20.0%
!!! ATTTTTCTCAATGAAATCAT+TGG - chr2_1:14786272-14786291 None:intergenic 20.0%
!! TTTCATTGAGAAAAATTCAA+TGG + chr2_1:14786276-14786295 Msa0197120:CDS 20.0%
!! TTCATTGAGAAAAATTCAAT+GGG + chr2_1:14786277-14786296 Msa0197120:CDS 20.0%
! TGCTAAGATAACTAAAGAAT+CGG + chr2_1:14784712-14784731 Msa0197120:CDS 25.0%
! ATGATGATTATTCAAAGAGA+TGG + chr2_1:14784897-14784916 Msa0197120:CDS 25.0%
! ACAATTATATGCAAAGGATA+TGG + chr2_1:14785160-14785179 Msa0197120:intron 25.0%
! TAAATACCTAATACATCCAT+AGG - chr2_1:14785250-14785269 None:intergenic 25.0%
! TGGATGTATTAGGTATTTAT+AGG + chr2_1:14785251-14785270 Msa0197120:intron 25.0%
! ATGTGATAAACGTGATAAAT+TGG + chr2_1:14785341-14785360 Msa0197120:intron 25.0%
! GAAACTTTATACACTATTGA+TGG + chr2_1:14785586-14785605 Msa0197120:intron 25.0%
! ATTAAAACTGATACATCCTT+GGG - chr2_1:14785757-14785776 None:intergenic 25.0%
! AATTAAAACTGATACATCCT+TGG - chr2_1:14785758-14785777 None:intergenic 25.0%
!!! GGAATTAAGAGTATTTACAA+TGG - chr2_1:14785807-14785826 None:intergenic 25.0%
! AAATACTCTTAATTCCAAGT+AGG + chr2_1:14785811-14785830 Msa0197120:intron 25.0%
!!! GGATATTAATTTTAACTCCT+AGG + chr2_1:14785832-14785851 Msa0197120:intron 25.0%
!! TTTTTATGAATTGAATGCCT+AGG - chr2_1:14785852-14785871 None:intergenic 25.0%
! TCTCTCTATATTATCTAATG+AGG - chr2_1:14786101-14786120 None:intergenic 25.0%
! AAAATCCTTGAATACATTGT+TGG + chr2_1:14786159-14786178 Msa0197120:CDS 25.0%
!! GATTGTGATACTTTTATTGA+GGG + chr2_1:14786181-14786200 Msa0197120:CDS 25.0%
! AATATAGATGTGCTAATGTT+TGG - chr2_1:14786328-14786347 None:intergenic 25.0%
! AACATTAGCACATCTATATT+TGG + chr2_1:14786328-14786347 Msa0197120:CDS 25.0%
TTTCAATCCTTGCATTGTAT+CGG + chr2_1:14784229-14784248 Msa0197120:CDS 30.0%
GATAACTAAAGAATCGGTTA+TGG + chr2_1:14784718-14784737 Msa0197120:CDS 30.0%
AGTATTATCCTACGATTGAA+GGG + chr2_1:14784783-14784802 Msa0197120:CDS 30.0%
ATGAAGATTAACTGGAATTG+TGG + chr2_1:14784848-14784867 Msa0197120:CDS 30.0%
! AAAGAGATGGTCAGTTTTTA+AGG + chr2_1:14784910-14784929 Msa0197120:CDS 30.0%
! AAGAGATGGTCAGTTTTTAA+GGG + chr2_1:14784911-14784930 Msa0197120:CDS 30.0%
! TTAGTAGCTTTGCAATCTAT+AGG + chr2_1:14785103-14785122 Msa0197120:intron 30.0%
! AATCTATGCTCAAGTGATTT+TGG + chr2_1:14785196-14785215 Msa0197120:intron 30.0%
! ATCTATGCTCAAGTGATTTT+GGG + chr2_1:14785197-14785216 Msa0197120:intron 30.0%
GTACTATTGAAGATGCTTAA+AGG - chr2_1:14785505-14785524 None:intergenic 30.0%
TGTGGTATGACTCATAAAAA+AGG - chr2_1:14785548-14785567 None:intergenic 30.0%
ATATTATAGGTTAACTGGGA+TGG + chr2_1:14785956-14785975 Msa0197120:intron 30.0%
ACAATCCAACAATGTATTCA+AGG - chr2_1:14786167-14786186 None:intergenic 30.0%
! GGATTGTGATACTTTTATTG+AGG + chr2_1:14786180-14786199 Msa0197120:CDS 30.0%
TTCCAACTCTTTCAATGATA+GGG + chr2_1:14786246-14786265 Msa0197120:CDS 30.0%
TTGAGAAAAATTCAATGGGA+AGG + chr2_1:14786281-14786300 Msa0197120:CDS 30.0%
TTCAAAATGCTATGGTTAAG+AGG - chr2_1:14786364-14786383 None:intergenic 30.0%
AAAGTTTACTATTTCCCGCA+AGG + chr2_1:14784137-14784156 Msa0197120:CDS 35.0%
GATACAATGCAAGGATTGAA+AGG - chr2_1:14784230-14784249 None:intergenic 35.0%
ACAAAGACTTCATCAGTATG+AGG - chr2_1:14784275-14784294 None:intergenic 35.0%
GAAACAATTTCATCACCTGT+AGG - chr2_1:14784368-14784387 None:intergenic 35.0%
ACCCTATCTGATGCTAATAA+CGG + chr2_1:14784404-14784423 Msa0197120:CDS 35.0%
ACCGTTATTAGCATCAGATA+GGG - chr2_1:14784408-14784427 None:intergenic 35.0%
TCATCTGGAGATATGTTTGT+TGG + chr2_1:14784662-14784681 Msa0197120:CDS 35.0%
! ATATGTTTGTTGGAATCCGT+CGG + chr2_1:14784672-14784691 Msa0197120:CDS 35.0%
AACTAAAGAATCGGTTATGG+CGG + chr2_1:14784721-14784740 Msa0197120:CDS 35.0%
GAGTATTATCCTACGATTGA+AGG + chr2_1:14784782-14784801 Msa0197120:CDS 35.0%
!! TGAAGGGTTTTGTGATTTTG+TGG + chr2_1:14784799-14784818 Msa0197120:CDS 35.0%
AGGATGCAATGAAGATTAAC+TGG + chr2_1:14784840-14784859 Msa0197120:CDS 35.0%
!! TTCCATAATTTGATGATGCG+TGG + chr2_1:14785071-14785090 Msa0197120:intron 35.0%
AACCACGCATCATCAAATTA+TGG - chr2_1:14785076-14785095 None:intergenic 35.0%
GAGAAGTTGAATGAATGTTG+TGG + chr2_1:14785392-14785411 Msa0197120:intron 35.0%
CAAGCAAATGGATAGAAGTA+TGG - chr2_1:14785464-14785483 None:intergenic 35.0%
CTATTGAAGATGCTTAAAGG+AGG - chr2_1:14785502-14785521 None:intergenic 35.0%
TTGGAGCAAGTTAAGTTTGT+AGG - chr2_1:14785729-14785748 None:intergenic 35.0%
TTTGGATTATGTGAGACTTC+AGG - chr2_1:14785983-14786002 None:intergenic 35.0%
AAATTAGTTCAACCTCCCAA+GGG - chr2_1:14786012-14786031 None:intergenic 35.0%
CTGGAAATCTATCATTGGAA+TGG - chr2_1:14786128-14786147 None:intergenic 35.0%
GAATGCTGGAAATCTATCAT+TGG - chr2_1:14786133-14786152 None:intergenic 35.0%
TGTGGAAAAAAGACTGTCTT+GGG - chr2_1:14786218-14786237 None:intergenic 35.0%
CTTCCAACTCTTTCAATGAT+AGG + chr2_1:14786245-14786264 Msa0197120:CDS 35.0%
GAAAAATTCAATGGGAAGGT+TGG + chr2_1:14786285-14786304 Msa0197120:CDS 35.0%
TGAACCAGGATTAACTTCTT+TGG - chr2_1:14786428-14786447 None:intergenic 35.0%
CCAAATAGCATAAATGAACC+AGG - chr2_1:14786442-14786461 None:intergenic 35.0%
CCTGGTTCATTTATGCTATT+TGG + chr2_1:14786439-14786458 Msa0197120:CDS 35.0%
TCATGCAAATTACTTCCAAC+AGG - chr2_1:14786478-14786497 None:intergenic 35.0%
!! GCCAAATCTTTGGTTCTACA+CGG - chr2_1:14784073-14784092 None:intergenic 40.0%
GTGTAGAACCAAAGATTTGG+CGG + chr2_1:14784072-14784091 Msa0197120:CDS 40.0%
!! AGGAATTTTGACAGAGTGTC+CGG - chr2_1:14784105-14784124 None:intergenic 40.0%
GACTTCATCAGTATGAGGAT+CGG - chr2_1:14784270-14784289 None:intergenic 40.0%
TGAACACAACCATCAGTGAT+GGG - chr2_1:14784314-14784333 None:intergenic 40.0%
GGTGATGAAATTGTTTCCTC+TGG + chr2_1:14784371-14784390 Msa0197120:CDS 40.0%
! TAGGGTTAGAGTTTTTCCAG+AGG - chr2_1:14784390-14784409 None:intergenic 40.0%
CACCGTTATTAGCATCAGAT+AGG - chr2_1:14784409-14784428 None:intergenic 40.0%
CTATCTGATGCTAATAACGG+TGG + chr2_1:14784407-14784426 Msa0197120:CDS 40.0%
! TGTTTAGTTTCGAGGTCAAG+CGG - chr2_1:14784476-14784495 None:intergenic 40.0%
GTAACAGACAGTTCTTGAGA+TGG - chr2_1:14784500-14784519 None:intergenic 40.0%
TACTCCAATTAGTGGTGATC+AGG - chr2_1:14784583-14784602 None:intergenic 40.0%
CACGAACTTACTCCAATTAG+TGG - chr2_1:14784591-14784610 None:intergenic 40.0%
CACTAATTGGAGTAAGTTCG+TGG + chr2_1:14784589-14784608 Msa0197120:CDS 40.0%
TCACAAAACCCTTCAATCGT+AGG - chr2_1:14784794-14784813 None:intergenic 40.0%
!! AGGGTTTTGTGATTTTGTGG+TGG + chr2_1:14784802-14784821 Msa0197120:CDS 40.0%
GCTTCTCCTATGGATGTATT+AGG + chr2_1:14785241-14785260 Msa0197120:intron 40.0%
! GATACATCCTTGGGAACTTT+TGG - chr2_1:14785748-14785767 None:intergenic 40.0%
ATAATCCAAAGCAAAGCCCT+TGG + chr2_1:14785993-14786012 Msa0197120:CDS 40.0%
TAATCCAAAGCAAAGCCCTT+GGG + chr2_1:14785994-14786013 Msa0197120:CDS 40.0%
GAAATTAGTTCAACCTCCCA+AGG - chr2_1:14786013-14786032 None:intergenic 40.0%
TACAATTGCCCTCAGCAAAA+AGG + chr2_1:14786053-14786072 Msa0197120:CDS 40.0%
! ACTCTAAGCCTTTTTGCTGA+GGG - chr2_1:14786064-14786083 None:intergenic 40.0%
! AACTCTAAGCCTTTTTGCTG+AGG - chr2_1:14786065-14786084 None:intergenic 40.0%
AAAAAGGCTTAGAGTTGCTC+AGG + chr2_1:14786069-14786088 Msa0197120:CDS 40.0%
AAAAGGCTTAGAGTTGCTCA+GGG + chr2_1:14786070-14786089 Msa0197120:CDS 40.0%
!!! AGGATTTTGCTGTTGAATGC+TGG - chr2_1:14786147-14786166 None:intergenic 40.0%
CTGTGGAAAAAAGACTGTCT+TGG - chr2_1:14786219-14786238 None:intergenic 40.0%
!!! CAAGACAGTCTTTTTTCCAC+AGG + chr2_1:14786217-14786236 Msa0197120:CDS 40.0%
CAAAGGGGTTCAAAATGCTA+TGG - chr2_1:14786372-14786391 None:intergenic 40.0%
CGTCAAACTTTGTCTCAAAG+GGG - chr2_1:14786387-14786406 None:intergenic 40.0%
CCGTCAAACTTTGTCTCAAA+GGG - chr2_1:14786388-14786407 None:intergenic 40.0%
!! CCCTTTGAGACAAAGTTTGA+CGG + chr2_1:14786385-14786404 Msa0197120:CDS 40.0%
ACCGTCAAACTTTGTCTCAA+AGG - chr2_1:14786389-14786408 None:intergenic 40.0%
AGCACCAAAGAAGTTAATCC+TGG + chr2_1:14786421-14786440 Msa0197120:CDS 40.0%
GGTAAGATGATACATCCTGT+TGG + chr2_1:14786460-14786479 Msa0197120:CDS 40.0%
TTTGCATGATTCTGCTACCA+AGG + chr2_1:14786489-14786508 Msa0197120:CDS 40.0%
TTGCATGATTCTGCTACCAA+GGG + chr2_1:14786490-14786509 Msa0197120:CDS 40.0%
AAGGGAGAAGATGGTTGTAT+GGG + chr2_1:14786508-14786527 Msa0197120:CDS 40.0%
! GGAGACATGGCGGAAATATT+TGG - chr2_1:14784038-14784057 None:intergenic 45.0%
!! ATCTTTGGTTCTACACGGCT+GGG - chr2_1:14784068-14784087 None:intergenic 45.0%
!! AATCTTTGGTTCTACACGGC+TGG - chr2_1:14784069-14784088 None:intergenic 45.0%
GCCGTGTAGAACCAAAGATT+TGG + chr2_1:14784069-14784088 Msa0197120:CDS 45.0%
! CATGTTCTAAGTGACCTTGC+GGG - chr2_1:14784154-14784173 None:intergenic 45.0%
! GCATGTTCTAAGTGACCTTG+CGG - chr2_1:14784155-14784174 None:intergenic 45.0%
! TTTCAGTGTTGGGGGGATTA+GGG - chr2_1:14784181-14784200 None:intergenic 45.0%
AGGGATAGGGTTTCAGTGTT+GGG - chr2_1:14784191-14784210 None:intergenic 45.0%
AAGGGATAGGGTTTCAGTGT+TGG - chr2_1:14784192-14784211 None:intergenic 45.0%
GAAACCCTATCCCTTCTTGA+TGG + chr2_1:14784197-14784216 Msa0197120:CDS 45.0%
GTGACCATCAAGAAGGGATA+GGG - chr2_1:14784204-14784223 None:intergenic 45.0%
! CTATCCCTTCTTGATGGTCA+CGG + chr2_1:14784203-14784222 Msa0197120:CDS 45.0%
! AACCATCAGTGATGGGAGTT+AGG - chr2_1:14784307-14784326 None:intergenic 45.0%
GTGAACACAACCATCAGTGA+TGG - chr2_1:14784315-14784334 None:intergenic 45.0%
TGTTCACAAACCTCCTACTG+AGG + chr2_1:14784328-14784347 Msa0197120:CDS 45.0%
! GAGATGGCTGTTTAGTTTCG+AGG - chr2_1:14784484-14784503 None:intergenic 45.0%
GACACCTGATCACCACTAAT+TGG + chr2_1:14784576-14784595 Msa0197120:CDS 45.0%
GACGAAAAGAAACTCGTCTG+CGG + chr2_1:14784611-14784630 Msa0197120:CDS 45.0%
ATCCGTCGGCATACTAAGTT+TGG + chr2_1:14784686-14784705 Msa0197120:CDS 45.0%
CACCAAACTTAGTATGCCGA+CGG - chr2_1:14784691-14784710 None:intergenic 45.0%
!!! TGATTTTGTGGTGGATGCCA+AGG + chr2_1:14784811-14784830 Msa0197120:CDS 45.0%
CATTGCATCCTCAACAACCT+TGG - chr2_1:14784831-14784850 None:intergenic 45.0%
!! CATAGGAGAAGCATCTTCGT+TGG - chr2_1:14785233-14785252 None:intergenic 45.0%
CAACGAAGATGCTTCTCCTA+TGG + chr2_1:14785231-14785250 Msa0197120:intron 45.0%
CAAACGGTGAGACAACTTCT+TGG - chr2_1:14785637-14785656 None:intergenic 45.0%
ACTTGCTCCAAAAGTTCCCA+AGG + chr2_1:14785738-14785757 Msa0197120:intron 45.0%
GGCAATTGTAGATTCAGTGC+AGG - chr2_1:14786043-14786062 None:intergenic 45.0%
AGAGTTGGAAGTAGTTCCTG+TGG - chr2_1:14786236-14786255 None:intergenic 45.0%
GGCCCTATCATTGAAAGAGT+TGG - chr2_1:14786251-14786270 None:intergenic 45.0%
!! TTCTTTGGTGCTGCACTTGT+GGG - chr2_1:14786413-14786432 None:intergenic 45.0%
CATACAACCATCTTCTCCCT+TGG - chr2_1:14786509-14786528 None:intergenic 45.0%
CAAGGGAGAAGATGGTTGTA+TGG + chr2_1:14786507-14786526 Msa0197120:CDS 45.0%
! GTTTCAGTGTTGGGGGGATT+AGG - chr2_1:14784182-14784201 None:intergenic 50.0%
! GATAGGGTTTCAGTGTTGGG+GGG - chr2_1:14784188-14784207 None:intergenic 50.0%
! GGATAGGGTTTCAGTGTTGG+GGG - chr2_1:14784189-14784208 None:intergenic 50.0%
GGGATAGGGTTTCAGTGTTG+GGG - chr2_1:14784190-14784209 None:intergenic 50.0%
CGTGACCATCAAGAAGGGAT+AGG - chr2_1:14784205-14784224 None:intergenic 50.0%
AGGACCGTGACCATCAAGAA+GGG - chr2_1:14784210-14784229 None:intergenic 50.0%
AAGGACCGTGACCATCAAGA+AGG - chr2_1:14784211-14784230 None:intergenic 50.0%
TCAACGGCCGATACAATGCA+AGG - chr2_1:14784239-14784258 None:intergenic 50.0%
AGGATCGGCGAGGTAATCAA+CGG - chr2_1:14784255-14784274 None:intergenic 50.0%
CTCCTAACTCCCATCACTGA+TGG + chr2_1:14784302-14784321 Msa0197120:CDS 50.0%
TCTTCACGAACCTCAGTAGG+AGG - chr2_1:14784341-14784360 None:intergenic 50.0%
TCCTACTGAGGTTCGTGAAG+AGG + chr2_1:14784340-14784359 Msa0197120:CDS 50.0%
TCCTCTTCACGAACCTCAGT+AGG - chr2_1:14784344-14784363 None:intergenic 50.0%
GTTCGTGAAGAGGAACCTAC+AGG + chr2_1:14784350-14784369 Msa0197120:CDS 50.0%
ATTGATGTCGCGCAAGAACG+AGG - chr2_1:14784446-14784465 None:intergenic 50.0%
TAGTTTCGAGGTCAAGCGGT+GGG - chr2_1:14784472-14784491 None:intergenic 50.0%
TTAGTTTCGAGGTCAAGCGG+TGG - chr2_1:14784473-14784492 None:intergenic 50.0%
CTGTCTGTTACCGACGTTCA+TGG + chr2_1:14784509-14784528 Msa0197120:CDS 50.0%
CCAGACTTTGCCATGAACGT+CGG - chr2_1:14784522-14784541 None:intergenic 50.0%
CGACGTTCATGGCAAAGTCT+GGG + chr2_1:14784520-14784539 Msa0197120:CDS 50.0%
GTGGTGATCAGGTGTCTCAA+GGG - chr2_1:14784572-14784591 None:intergenic 50.0%
AGTGGTGATCAGGTGTCTCA+AGG - chr2_1:14784573-14784592 None:intergenic 50.0%
TCTCTGCTCCTAATCGTCCA+TGG + chr2_1:14784948-14784967 Msa0197120:CDS 50.0%
TATACCTCAAGCATGCGCCA+TGG - chr2_1:14784968-14784987 None:intergenic 50.0%
!! TCTTTGGTGCTGCACTTGTG+GGG - chr2_1:14786412-14786431 None:intergenic 50.0%
!! CTTCTTTGGTGCTGCACTTG+TGG - chr2_1:14786414-14786433 None:intergenic 50.0%
TCTGCTACCAAGGGAGAAGA+TGG + chr2_1:14786499-14786518 Msa0197120:CDS 50.0%
GAGCAGCACCGCCAAATCTT+TGG - chr2_1:14784083-14784102 None:intergenic 55.0%
!! AAGATTTGGCGGTGCTGCTC+CGG + chr2_1:14784083-14784102 Msa0197120:CDS 55.0%
CATCAGTATGAGGATCGGCG+AGG - chr2_1:14784265-14784284 None:intergenic 55.0%
TGTCGCGCAAGAACGAGGTA+CGG - chr2_1:14784441-14784460 None:intergenic 55.0%
CCGACGTTCATGGCAAAGTC+TGG + chr2_1:14784519-14784538 Msa0197120:CDS 55.0%
GAGTTTCGCCATGTCTACCG+TGG + chr2_1:14784542-14784561 Msa0197120:CDS 55.0%
AGGGAGTTCCACGGTAGACA+TGG - chr2_1:14784553-14784572 None:intergenic 55.0%
GGTGTCTCAAGGGAGTTCCA+CGG - chr2_1:14784562-14784581 None:intergenic 55.0%
AGAATCGGTTATGGCGGCAG+CGG + chr2_1:14784727-14784746 Msa0197120:CDS 55.0%
GGTGGATGCCAAGGTTGTTG+AGG + chr2_1:14784820-14784839 Msa0197120:CDS 55.0%
AGCATGCGCCATGGACGATT+AGG - chr2_1:14784959-14784978 None:intergenic 55.0%
TCCAAAGCAAAGCCCTTGGG+AGG + chr2_1:14785997-14786016 Msa0197120:CDS 55.0%
ACCTCCCAAGGGCTTTGCTT+TGG - chr2_1:14786001-14786020 None:intergenic 55.0%
! GGGTTGTGGTGGAGACATGG+CGG - chr2_1:14784048-14784067 None:intergenic 60.0%
! GCTGGGTTGTGGTGGAGACA+TGG - chr2_1:14784051-14784070 None:intergenic 60.0%
TCTACACGGCTGGGTTGTGG+TGG - chr2_1:14784059-14784078 None:intergenic 60.0%
GGTTCTACACGGCTGGGTTG+TGG - chr2_1:14784062-14784081 None:intergenic 60.0%
TCGTCCATGGCGCATGCTTG+AGG + chr2_1:14784961-14784980 Msa0197120:CDS 60.0%
GGTTATGGCGGCAGCGGAGT+TGG + chr2_1:14784733-14784752 Msa0197120:CDS 65.0%
TATGGCGGCAGCGGAGTTGG+CGG + chr2_1:14784736-14784755 Msa0197120:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 14784026 14786543 14784026 ID=Msa0197120;Name=Msa0197120
chr2_1 mRNA 14784026 14786543 14784026 ID=Msa0197120-mRNA-1;Parent=Msa0197120;Name=Msa0197120-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|511
chr2_1 exon 14784026 14784982 14784026 ID=Msa0197120-mRNA-1:exon:6243;Parent=Msa0197120-mRNA-1
chr2_1 exon 14785965 14786543 14785965 ID=Msa0197120-mRNA-1:exon:6244;Parent=Msa0197120-mRNA-1
chr2_1 CDS 14784026 14784982 14784026 ID=Msa0197120-mRNA-1:cds;Parent=Msa0197120-mRNA-1
chr2_1 CDS 14785965 14786543 14785965 ID=Msa0197120-mRNA-1:cds;Parent=Msa0197120-mRNA-1
Gene Sequence

>Msa0197120

ATGGTAGAACCAAATATTTCCGCCATGTCTCCACCACAACCCAGCCGTGTAGAACCAAAGATTTGGCGGTGCTGCTCCGGACACTCTGTCAAAATTCCTAAACTTCATTCAAAAGTTTACTATTTCCCGCAAGGTCACTTAGAACATGCTTGCCCTAATCCCCCCAACACTGAAACCCTATCCCTTCTTGATGGTCACGGTCCTTTCAATCCTTGCATTGTATCGGCCGTTGATTACCTCGCCGATCCTCATACTGATGAAGTCTTTGTCAAACTTCTCCTAACTCCCATCACTGATGGTTGTGTTCACAAACCTCCTACTGAGGTTCGTGAAGAGGAACCTACAGGTGATGAAATTGTTTCCTCTGGAAAAACTCTAACCCTATCTGATGCTAATAACGGTGGTGCATTCTCCGTACCTCGTTCTTGCGCGACATCAATCTTCCCACCGCTTGACCTCGAAACTAAACAGCCATCTCAAGAACTGTCTGTTACCGACGTTCATGGCAAAGTCTGGGAGTTTCGCCATGTCTACCGTGGAACTCCCTTGAGACACCTGATCACCACTAATTGGAGTAAGTTCGTGGACGAAAAGAAACTCGTCTGCGGCGATTCTGTAATTTTTATGAAAAAGAAATCATCTGGAGATATGTTTGTTGGAATCCGTCGGCATACTAAGTTTGGTGCTGCTAAGATAACTAAAGAATCGGTTATGGCGGCAGCGGAGTTGGCGGATAAGAATATCGCTTTTGAAGTTGAGTATTATCCTACGATTGAAGGGTTTTGTGATTTTGTGGTGGATGCCAAGGTTGTTGAGGATGCAATGAAGATTAACTGGAATTGTGGAATGAGAATTAAATTTTCTTTGAAGAATGATGATTATTCAAAGAGATGGTCAGTTTTTAAGGGTACAATATCTGCTCTCTCTGCTCCTAATCGTCCATGGCGCATGCTTGAGGTTAACTGGGATGGACCTGAAGTCTCACATAATCCAAAGCAAAGCCCTTGGGAGGTTGAACTAATTTCTTATATACCTGCACTGAATCTACAATTGCCCTCAGCAAAAAGGCTTAGAGTTGCTCAGGGTTATACCTCATTAGATAATATAGAGAGATCTTCCATTCCAATGATAGATTTCCAGCATTCAACAGCAAAATCCTTGAATACATTGTTGGATTGTGATACTTTTATTGAGGGCATGCAGAGAGCCCAAGACAGTCTTTTTTCCACAGGAACTACTTCCAACTCTTTCAATGATAGGGCCAATGATTTCATTGAGAAAAATTCAATGGGAAGGTTGGATATTGTGTCAACTGAGCCAAACATTAGCACATCTATATTTGGTGACTTGTCACCTCTTAACCATAGCATTTTGAACCCCTTTGAGACAAAGTTTGACGGTCCCCACAAGTGCAGCACCAAAGAAGTTAATCCTGGTTCATTTATGCTATTTGGTAAGATGATACATCCTGTTGGAAGTAATTTGCATGATTCTGCTACCAAGGGAGAAGATGGTTGTATGGGCTGCAATAATTGA
Protein sequence

>Msa0197120

MVEPNISAMSPPQPSRVEPKIWRCCSGHSVKIPKLHSKVYYFPQGHLEHACPNPPNTETLSLLDGHGPFNPCIVSAVDYLADPHTDEVFVKLLLTPITDGCVHKPPTEVREEEPTGDEIVSSGKTLTLSDANNGGAFSVPRSCATSIFPPLDLETKQPSQELSVTDVHGKVWEFRHVYRGTPLRHLITTNWSKFVDEKKLVCGDSVIFMKKKSSGDMFVGIRRHTKFGAAKITKESVMAAAELADKNIAFEVEYYPTIEGFCDFVVDAKVVEDAMKINWNCGMRIKFSLKNDDYSKRWSVFKGTISALSAPNRPWRMLEVNWDGPEVSHNPKQSPWEVELISYIPALNLQLPSAKRLRVAQGYTSLDNIERSSIPMIDFQHSTAKSLNTLLDCDTFIEGMQRAQDSLFSTGTTSNSFNDRANDFIEKNSMGRLDIVSTEPNISTSIFGDLSPLNHSILNPFETKFDGPHKCSTKEVNPGSFMLFGKMIHPVGSNLHDSATKGEDGCMGCNN*