Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197220 | XP_003594167.1 | 96.552 | 551 | 8 | 1 | 1 | 551 | 1 | 540 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197220 | sp|B3LF48|EHD2_ARATH | 75.735 | 544 | 120 | 2 | 8 | 551 | 14 | 545 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197220 | G7ILR3 | 96.552 | 551 | 8 | 1 | 1 | 551 | 1 | 540 | 0.0 | 1092 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197220 | Msa0238900 | 0.854044 | 1.599532e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197220 | MtrunA17_Chr2g0289411 | 96.552 | 551 | 8 | 1 | 1 | 551 | 1 | 540 | 0.0 | 1092 |
| Msa0197220 | MtrunA17_Chr4g0075521 | 78.349 | 545 | 104 | 2 | 7 | 551 | 12 | 542 | 0.0 | 895 |
| Msa0197220 | MtrunA17_Chr5g0444771 | 76.330 | 545 | 116 | 2 | 7 | 551 | 12 | 543 | 0.0 | 847 |
| Msa0197220 | MtrunA17_Chr3g0099991 | 62.088 | 546 | 116 | 6 | 7 | 550 | 15 | 471 | 0.0 | 662 |
| Msa0197220 | MtrunA17_Chr3g0100041 | 71.396 | 437 | 107 | 3 | 117 | 548 | 13 | 436 | 0.0 | 642 |
| Msa0197220 | MtrunA17_Chr3g0144041 | 46.250 | 80 | 43 | 0 | 14 | 93 | 10 | 89 | 1.37e-14 | 77.4 |
| Msa0197220 | MtrunA17_Chr1g0152711 | 41.667 | 84 | 49 | 0 | 7 | 90 | 8 | 91 | 2.72e-14 | 70.5 |
| Msa0197220 | MtrunA17_Chr5g0448681 | 36.842 | 133 | 70 | 4 | 14 | 143 | 14 | 135 | 6.01e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197220 | AT4G05520.1 | 75.735 | 544 | 120 | 2 | 8 | 551 | 14 | 545 | 0.0 | 874 |
| Msa0197220 | AT4G05520.2 | 75.919 | 544 | 118 | 3 | 8 | 551 | 14 | 544 | 0.0 | 870 |
| Msa0197220 | AT3G20290.3 | 74.495 | 545 | 128 | 1 | 7 | 551 | 12 | 545 | 0.0 | 840 |
| Msa0197220 | AT3G20290.1 | 74.495 | 545 | 128 | 1 | 7 | 551 | 12 | 545 | 0.0 | 840 |
| Msa0197220 | AT3G20290.2 | 74.495 | 545 | 128 | 1 | 7 | 551 | 12 | 545 | 0.0 | 840 |
| Msa0197220 | AT1G21630.2 | 39.167 | 120 | 69 | 2 | 14 | 130 | 13 | 131 | 1.39e-15 | 80.9 |
| Msa0197220 | AT1G21630.4 | 39.167 | 120 | 69 | 2 | 14 | 130 | 13 | 131 | 1.39e-15 | 80.9 |
| Msa0197220 | AT1G21630.3 | 39.167 | 120 | 69 | 2 | 14 | 130 | 13 | 131 | 1.51e-15 | 80.9 |
| Msa0197220 | AT1G21630.1 | 39.167 | 120 | 69 | 2 | 14 | 130 | 13 | 131 | 1.53e-15 | 80.9 |
| Msa0197220 | AT1G20760.1 | 27.811 | 169 | 115 | 3 | 14 | 176 | 11 | 178 | 5.37e-13 | 72.4 |
Find 115 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACGATCACAAGCCTTCTT+TGG | 0.217914 | 2_1:-14971404 | None:intergenic |
| TTCAATGGCCTGACAACTTT+TGG | 0.228735 | 2_1:+14970471 | Msa0197220:CDS |
| TGGTTCAATTTAGCAGATTC+AGG | 0.261126 | 2_1:+14967389 | Msa0197220:CDS |
| TTCTCAACTCAAGCAGCTTT+GGG | 0.264704 | 2_1:+14967558 | Msa0197220:CDS |
| CTGAATTTCTTCAAAAGCTC+TGG | 0.269036 | 2_1:-14971958 | None:intergenic |
| CGATCTGTTGGCAGATTTGC+TGG | 0.294381 | 2_1:+14971376 | Msa0197220:CDS |
| GTTCTCAACTCAAGCAGCTT+TGG | 0.296386 | 2_1:+14967557 | Msa0197220:CDS |
| ATATCCTAGCATGTCATCTA+TGG | 0.298727 | 2_1:-14971929 | None:intergenic |
| CTTTAAACATTTCAATCATA+TGG | 0.300204 | 2_1:-14971985 | None:intergenic |
| AGGGGTATCTTCCTTTCTTA+AGG | 0.310482 | 2_1:-14972185 | None:intergenic |
| TCTATGGCTTGAATCATCTT+TGG | 0.312040 | 2_1:-14971913 | None:intergenic |
| TGTTTAAGAAATGTAAGATT+TGG | 0.353579 | 2_1:+14972068 | Msa0197220:three_prime_UTR |
| TCAGCAAATCCTTCATTTGT+AGG | 0.356837 | 2_1:-14971317 | None:intergenic |
| AAACCCATGGTCATGCTTCT+TGG | 0.358104 | 2_1:+14969969 | Msa0197220:CDS |
| TTGCAGCTTATGAGAGTCTA+TGG | 0.359591 | 2_1:+14970963 | Msa0197220:intron |
| TTTATTGATTGCAGTGGATA+AGG | 0.364448 | 2_1:+14968410 | Msa0197220:intron |
| TCCTGATGAAAGGAGTATTC+CGG | 0.374310 | 2_1:+14970416 | Msa0197220:CDS |
| ATGTATACACGCGCAACTTC+AGG | 0.375254 | 2_1:-14971023 | None:intergenic |
| GTATCTAATCCTTCAATAAC+AGG | 0.381656 | 2_1:-14968447 | None:intergenic |
| ATTTCACTGGTGTTGTATCT+TGG | 0.382318 | 2_1:+14970695 | Msa0197220:CDS |
| ACAACAAATCTATCTGTTGT+AGG | 0.392224 | 2_1:-14970195 | None:intergenic |
| GACGATCACAAGCCTTCTTT+GGG | 0.403439 | 2_1:-14971403 | None:intergenic |
| CCTGATGAAAGGAGTATTCC+GGG | 0.405307 | 2_1:+14970417 | Msa0197220:CDS |
| AATGATAAGCCTACAAATGA+AGG | 0.405339 | 2_1:+14971308 | Msa0197220:CDS |
| TACATTTCTTAAACATATGA+TGG | 0.406782 | 2_1:-14972060 | None:intergenic |
| AGTTATTGAAGAGTTGTAGA+TGG | 0.410946 | 2_1:+14972101 | Msa0197220:three_prime_UTR |
| GTTAAACCACCTGTTATTGA+AGG | 0.413593 | 2_1:+14968438 | Msa0197220:CDS |
| TTGGCTTTGCCCATCATTGT+TGG | 0.414699 | 2_1:-14971592 | None:intergenic |
| GCAGTTACATCAATAGTTGA+TGG | 0.418875 | 2_1:+14969706 | Msa0197220:CDS |
| GAGAAGAATGACATCACATT+TGG | 0.419446 | 2_1:-14970725 | None:intergenic |
| TTCTAACCATTCACTTCAGA+TGG | 0.420122 | 2_1:-14968620 | None:intergenic |
| TTTGCAGTGAACCATGAGTT+AGG | 0.422813 | 2_1:-14968752 | None:intergenic |
| CCCGGAATACTCCTTTCATC+AGG | 0.428875 | 2_1:-14970417 | None:intergenic |
| AACATTGTGAAAATAGTAAT+GGG | 0.429556 | 2_1:-14972208 | None:intergenic |
| TTGGCATCTCCTTCTTAAGA+TGG | 0.431839 | 2_1:-14971573 | None:intergenic |
| CAAGCTTATGTGGATCGAAT+AGG | 0.444146 | 2_1:-14970747 | None:intergenic |
| TTGTGTCCTTTGTTTCTCTC+CGG | 0.449994 | 2_1:-14970662 | None:intergenic |
| AATCTATCTGTTGTAGGCTC+TGG | 0.454663 | 2_1:-14970189 | None:intergenic |
| GAAGGAGATGCCAACAATGA+TGG | 0.458954 | 2_1:+14971582 | Msa0197220:CDS |
| GACACTCCTGGTGTCCTATC+CGG | 0.460325 | 2_1:+14970643 | Msa0197220:CDS |
| TTTCTAGATAACCTTAAGAA+AGG | 0.470932 | 2_1:+14972174 | Msa0197220:three_prime_UTR |
| TGAATTTCTTCAAAAGCTCT+GGG | 0.473582 | 2_1:-14971957 | None:intergenic |
| GGAGCATTGATGTGGTCGTT+AGG | 0.474231 | 2_1:+14970984 | Msa0197220:CDS |
| TGAGTTCGTTACTGCTATGC+AGG | 0.477502 | 2_1:+14967621 | Msa0197220:CDS |
| TTAACAGCTATAGTGTTTCC+CGG | 0.478678 | 2_1:-14970435 | None:intergenic |
| AAACATTGTGAAAATAGTAA+TGG | 0.478852 | 2_1:-14972209 | None:intergenic |
| AGAAATTAAGGAACCAAAGT+AGG | 0.479321 | 2_1:-14971685 | None:intergenic |
| TTCTCTGAAGTGCTCAACAC+TGG | 0.483192 | 2_1:-14971848 | None:intergenic |
| AATGCTGATATGCCTTTCAA+TGG | 0.494165 | 2_1:+14970456 | Msa0197220:CDS |
| AGATAGATTTGTTGTTGTCA+TGG | 0.495429 | 2_1:+14970203 | Msa0197220:CDS |
| AAAGAAGGCTTGTGATCGTC+GGG | 0.496833 | 2_1:+14971406 | Msa0197220:CDS |
| ATGAACCTCCAAAAGTTGTC+AGG | 0.498414 | 2_1:-14970479 | None:intergenic |
| CATAATTAGCCATCTTAAGA+AGG | 0.498909 | 2_1:+14971564 | Msa0197220:CDS |
| TTGCTAAAATGTGATTATCC+AGG | 0.506481 | 2_1:+14970029 | Msa0197220:CDS |
| TCCTTTGTTTCTCTCCGGAT+AGG | 0.506615 | 2_1:-14970657 | None:intergenic |
| TCACTGATGTCAAGCTTATG+TGG | 0.507967 | 2_1:-14970757 | None:intergenic |
| TTCTCTCCGGATAGGACACC+AGG | 0.509293 | 2_1:-14970649 | None:intergenic |
| CTTCTTGGTCAATACTCTAC+GGG | 0.509946 | 2_1:+14969984 | Msa0197220:CDS |
| TTTGCTGGATATCCCAAAGA+AGG | 0.510260 | 2_1:+14971391 | Msa0197220:CDS |
| GAAGGATTTGCTGATCCACT+AGG | 0.516671 | 2_1:+14971326 | Msa0197220:CDS |
| AACCATGAGTTAGGTAGAAA+CGG | 0.518317 | 2_1:-14968743 | None:intergenic |
| GCTTCTTGGTCAATACTCTA+CGG | 0.519068 | 2_1:+14969983 | Msa0197220:CDS |
| ACTATTGATGTAACTGCACT+TGG | 0.522383 | 2_1:-14969700 | None:intergenic |
| AGGTAGAAACGGTTGAGGCT+TGG | 0.530001 | 2_1:-14968732 | None:intergenic |
| GAAGTTGCGCGTGTATACAT+TGG | 0.534004 | 2_1:+14971026 | Msa0197220:CDS |
| TACTGACAGACTAAAGCCCT+TGG | 0.536151 | 2_1:+14969744 | Msa0197220:CDS |
| AAGTTGCGCGTGTATACATT+GGG | 0.538555 | 2_1:+14971027 | Msa0197220:CDS |
| CAAAGAAGCTATGATTTCAC+TGG | 0.538899 | 2_1:+14970682 | Msa0197220:CDS |
| AAGGAGATGCCAACAATGAT+GGG | 0.539017 | 2_1:+14971583 | Msa0197220:CDS |
| TCTAACCATTCACTTCAGAT+GGG | 0.540850 | 2_1:-14968619 | None:intergenic |
| GTAACTCAGGAGCACACATT+GGG | 0.545234 | 2_1:+14970166 | Msa0197220:intron |
| AACCGTTTCTACCTAACTCA+TGG | 0.552088 | 2_1:+14968741 | Msa0197220:CDS |
| ATTGATGTAACTGCACTTGG+AGG | 0.553248 | 2_1:-14969697 | None:intergenic |
| TTGTGAAAATAGTAATGGGA+GGG | 0.556235 | 2_1:-14972204 | None:intergenic |
| TGTAACTCAGGAGCACACAT+TGG | 0.556316 | 2_1:+14970165 | Msa0197220:intron |
| ATATCTATAAGCAACTTCCA+AGG | 0.557333 | 2_1:-14969761 | None:intergenic |
| TTGGTGTCGCTTGCACAAGC+AGG | 0.557465 | 2_1:+14967743 | Msa0197220:CDS |
| ACTACCCCATCTGAAGTGAA+TGG | 0.563701 | 2_1:+14968614 | Msa0197220:CDS |
| TATAGTCTGGTCCTGATGAA+AGG | 0.565654 | 2_1:+14970406 | Msa0197220:intron |
| TGTGAAAATAGTAATGGGAG+GGG | 0.566829 | 2_1:-14972203 | None:intergenic |
| AACAATGATGGGCAAAGCCA+AGG | 0.570949 | 2_1:+14971594 | Msa0197220:CDS |
| TCTCGACAATGAATTTGCAA+AGG | 0.571796 | 2_1:+14971639 | Msa0197220:CDS |
| CAAAGAAGGCTTGTGATCGT+CGG | 0.572542 | 2_1:+14971405 | Msa0197220:CDS |
| TATCTATAAGCAACTTCCAA+GGG | 0.575490 | 2_1:-14969760 | None:intergenic |
| TTTAGCATCAAAATCGCTGT+TGG | 0.576969 | 2_1:-14969949 | None:intergenic |
| GAAGGAACAGAACGATCTGT+TGG | 0.578345 | 2_1:+14971364 | Msa0197220:CDS |
| TCTCTGAAGTGCTCAACACT+GGG | 0.578371 | 2_1:-14971847 | None:intergenic |
| GATGGAGATGGACGAATCAG+TGG | 0.586299 | 2_1:+14967493 | Msa0197220:intron |
| AAAGTTGTCAGGCCATTGAA+AGG | 0.591326 | 2_1:-14970468 | None:intergenic |
| GTAACAATTGTGGACACTCC+TGG | 0.594031 | 2_1:+14970631 | Msa0197220:CDS |
| CAAGCCATAGATGACATGCT+AGG | 0.594699 | 2_1:+14971925 | Msa0197220:CDS |
| GAGTTAGGTAGAAACGGTTG+AGG | 0.596774 | 2_1:-14968737 | None:intergenic |
| CGTGTAATTTCATCTTTACG+AGG | 0.598565 | 2_1:+14970790 | Msa0197220:CDS |
| ATTGTGAAAATAGTAATGGG+AGG | 0.599381 | 2_1:-14972205 | None:intergenic |
| AAGGATTTGCTGATCCACTA+GGG | 0.600452 | 2_1:+14971327 | Msa0197220:CDS |
| GTAGGCAAAAGTGAAGGTGG+AGG | 0.602403 | 2_1:-14971667 | None:intergenic |
| ATACTTGTTGAGTATCAACT+TGG | 0.610855 | 2_1:-14970852 | None:intergenic |
| TTGACCAAGAAGCATGACCA+TGG | 0.611614 | 2_1:-14969973 | None:intergenic |
| CAAATGCCACTTACCAGCAA+CGG | 0.616771 | 2_1:-14969799 | None:intergenic |
| AAAGTAGGCAAAAGTGAAGG+TGG | 0.626269 | 2_1:-14971670 | None:intergenic |
| CTAACCATTCACTTCAGATG+GGG | 0.630176 | 2_1:-14968618 | None:intergenic |
| TGACCAAGAAGCATGACCAT+GGG | 0.632896 | 2_1:-14969972 | None:intergenic |
| TCCTATCCGGAGAGAAACAA+AGG | 0.636447 | 2_1:+14970656 | Msa0197220:CDS |
| TCAACACTGGGAAAATCACC+AGG | 0.645712 | 2_1:-14971835 | None:intergenic |
| GTTGGATGAAGTAACAATTG+TGG | 0.645886 | 2_1:+14970621 | Msa0197220:CDS |
| TCTAATCCTTCAATAACAGG+TGG | 0.649072 | 2_1:-14968444 | None:intergenic |
| AGAGAGTATCATCTACCACC+TGG | 0.657076 | 2_1:+14971817 | Msa0197220:CDS |
| ACCAAAGTAGGCAAAAGTGA+AGG | 0.673037 | 2_1:-14971673 | None:intergenic |
| CTTGCTGATAACAAACGACA+AGG | 0.678146 | 2_1:+14967583 | Msa0197220:CDS |
| CTGACTTATTCAAAACCACA+CGG | 0.679980 | 2_1:-14970828 | None:intergenic |
| AAACTGCTACGTATCAACAA+TGG | 0.685946 | 2_1:+14967369 | Msa0197220:CDS |
| TTCATCTTTACGAGGCAACG+AGG | 0.693384 | 2_1:+14970798 | Msa0197220:CDS |
| GAGTCTATGGAGCATTGATG+TGG | 0.702997 | 2_1:+14970976 | Msa0197220:CDS |
| CAACGAGGACAAGATCCGTG+TGG | 0.758449 | 2_1:+14970813 | Msa0197220:CDS |
| ACACTGGGAAAATCACCAGG+TGG | 0.772401 | 2_1:-14971832 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTAATATTAAGAATAT+AGG | - | chr2_1:14969633-14969652 | None:intergenic | 10.0% |
| !! | ATATTAACAATTCAAATGTT+TGG | + | chr2_1:14968217-14968236 | Msa0197220:intron | 15.0% |
| !! | AAATCAAAGTTAAACATTAA+CGG | - | chr2_1:14968296-14968315 | None:intergenic | 15.0% |
| !! | ATTTCTATATTTGATTCATA+AGG | - | chr2_1:14969043-14969062 | None:intergenic | 15.0% |
| !!! | GTATGTTTTAGTTATAAAAT+AGG | - | chr2_1:14969827-14969846 | None:intergenic | 15.0% |
| !!! | TTATCTTTTAATTTATAGTC+TGG | + | chr2_1:14970393-14970412 | Msa0197220:intron | 15.0% |
| !! | TTGCTAATTTCAAATTATTT+AGG | + | chr2_1:14971434-14971453 | Msa0197220:intron | 15.0% |
| !! | GAAAAATAATTGAGAAATTA+AGG | - | chr2_1:14971700-14971719 | None:intergenic | 15.0% |
| !!! | TTTTCATTTTATGTTTTACA+TGG | + | chr2_1:14971715-14971734 | Msa0197220:intron | 15.0% |
| !! | AAACATAAATTAAAAGTTAC+AGG | - | chr2_1:14971752-14971771 | None:intergenic | 15.0% |
| !! | AGTCAATAGATAAGATTAAT+AGG | - | chr2_1:14967896-14967915 | None:intergenic | 20.0% |
| !!! | AGTGTTTAGCTTTAAAATAA+AGG | + | chr2_1:14969299-14969318 | Msa0197220:intron | 20.0% |
| !!! | ATGTTCTAATTGATTCTTTT+TGG | + | chr2_1:14969363-14969382 | Msa0197220:intron | 20.0% |
| !! | ATCCTACTTAAAAACAATTT+AGG | + | chr2_1:14969554-14969573 | Msa0197220:intron | 20.0% |
| !! | TTAACATCATCATATTTACA+TGG | - | chr2_1:14969897-14969916 | None:intergenic | 20.0% |
| !!! | ATCATCAATTTTGTAAATGA+AGG | - | chr2_1:14970098-14970117 | None:intergenic | 20.0% |
| !!! | ATTTACAAAATTGATGATTG+CGG | + | chr2_1:14970100-14970119 | Msa0197220:intron | 20.0% |
| !! | TATAAACAAATAAAACTCAC+TGG | - | chr2_1:14970540-14970559 | None:intergenic | 20.0% |
| !! | ATCAATTCACTTCATATTAA+TGG | + | chr2_1:14971238-14971257 | Msa0197220:intron | 20.0% |
| !!! | TTCAAATTATTTAGGTTACT+TGG | + | chr2_1:14971442-14971461 | Msa0197220:intron | 20.0% |
| !! | CTTTAAACATTTCAATCATA+TGG | - | chr2_1:14971988-14972007 | None:intergenic | 20.0% |
| !!! | CATTTTACATTTCAATCATA+TGG | - | chr2_1:14972023-14972042 | None:intergenic | 20.0% |
| !! | TACATTTCTTAAACATATGA+TGG | - | chr2_1:14972063-14972082 | None:intergenic | 20.0% |
| !! | TGTTTAAGAAATGTAAGATT+TGG | + | chr2_1:14972068-14972087 | Msa0197220:three_prime_UTR | 20.0% |
| !! | ACGATTTGTTTCATTTGATT+TGG | + | chr2_1:14967456-14967475 | Msa0197220:intron | 25.0% |
| !!! | TTGGTGTTTTTTATTGTAGA+TGG | + | chr2_1:14967475-14967494 | Msa0197220:intron | 25.0% |
| !!! | TTTTTTATTGTAGATGGAGA+TGG | + | chr2_1:14967481-14967500 | Msa0197220:intron | 25.0% |
| ! | TTAATAAATGACACTTGACA+CGG | + | chr2_1:14967923-14967942 | Msa0197220:intron | 25.0% |
| ! | TAAAATCCTTAATTCCTTAG+CGG | - | chr2_1:14968324-14968343 | None:intergenic | 25.0% |
| !!! | GTTTAAAAGTTTTGTCACTA+AGG | + | chr2_1:14968348-14968367 | Msa0197220:intron | 25.0% |
| !!! | TTCTTTTTTATTGATTGCAG+TGG | + | chr2_1:14968404-14968423 | Msa0197220:intron | 25.0% |
| ! | TTAGTAATTAAGCACAATGT+GGG | - | chr2_1:14968508-14968527 | None:intergenic | 25.0% |
| !! | GTTTGCTGGAAAAAAAATAA+GGG | - | chr2_1:14968578-14968597 | None:intergenic | 25.0% |
| !!! | AGTTTGCTGGAAAAAAAATA+AGG | - | chr2_1:14968579-14968598 | None:intergenic | 25.0% |
| ! | AATGATGTTTATATGCTTCA+AGG | - | chr2_1:14968995-14969014 | None:intergenic | 25.0% |
| ! | ATATAAACATCATTTCCTGA+TGG | + | chr2_1:14969001-14969020 | Msa0197220:intron | 25.0% |
| !! | TTAGAGAACATTTCTTCTTT+TGG | + | chr2_1:14969128-14969147 | Msa0197220:intron | 25.0% |
| !! | TAGAGAACATTTCTTCTTTT+GGG | + | chr2_1:14969129-14969148 | Msa0197220:intron | 25.0% |
| ! | ATAGCTAGCATAATCTTTAT+AGG | - | chr2_1:14969194-14969213 | None:intergenic | 25.0% |
| ! | ATTATTGCCAATGTAAAAGT+GGG | - | chr2_1:14969277-14969296 | None:intergenic | 25.0% |
| ! | TATTATTGCCAATGTAAAAG+TGG | - | chr2_1:14969278-14969297 | None:intergenic | 25.0% |
| ! | ATATTTGCCAAGGAAAAATA+AGG | - | chr2_1:14969343-14969362 | None:intergenic | 25.0% |
| ! | ATTAGAACATATATTTGCCA+AGG | - | chr2_1:14969353-14969372 | None:intergenic | 25.0% |
| ! | AATGTAACAATGAATGGAAA+TGG | - | chr2_1:14969481-14969500 | None:intergenic | 25.0% |
| !!! | CACCTAAATTGTTTTTAAGT+AGG | - | chr2_1:14969559-14969578 | None:intergenic | 25.0% |
| !! | TTTACAAAATTGATGATTGC+GGG | + | chr2_1:14970101-14970120 | Msa0197220:intron | 25.0% |
| ! | AGATTACAATCAGAAAAACA+TGG | + | chr2_1:14970268-14970287 | Msa0197220:intron | 25.0% |
| !!! | GTGTTGTAAGCATTTTATTT+CGG | + | chr2_1:14971195-14971214 | Msa0197220:intron | 25.0% |
| ! | GTCAAGAATATCAAATTAAC+TGG | - | chr2_1:14971273-14971292 | None:intergenic | 25.0% |
| ! | TTTCTAGATAACCTTAAGAA+AGG | + | chr2_1:14972174-14972193 | Msa0197220:three_prime_UTR | 25.0% |
| !! | AGCGTTTTTGAAAATGAAGA+CGG | + | chr2_1:14967328-14967347 | Msa0197220:exon | 30.0% |
| ! | AACAAACGACAAGGATTTTT+AGG | + | chr2_1:14967592-14967611 | Msa0197220:CDS | 30.0% |
| !! | TAATGACAAGCTCTAAAACA+CGG | - | chr2_1:14968060-14968079 | None:intergenic | 30.0% |
| ATCAGAAATCATTCTACAAG+CGG | - | chr2_1:14968159-14968178 | None:intergenic | 30.0% | |
| ! | TTCTGATTCGTAGTTTCAAA+TGG | + | chr2_1:14968172-14968191 | Msa0197220:intron | 30.0% |
| !! | CTTTGATTTTAAATCCGCTA+AGG | + | chr2_1:14968307-14968326 | Msa0197220:intron | 30.0% |
| TTAAATCCGCTAAGGAATTA+AGG | + | chr2_1:14968315-14968334 | Msa0197220:intron | 30.0% | |
| ! | TTTATTGATTGCAGTGGATA+AGG | + | chr2_1:14968410-14968429 | Msa0197220:intron | 30.0% |
| GTATCTAATCCTTCAATAAC+AGG | - | chr2_1:14968450-14968469 | None:intergenic | 30.0% | |
| CTTAGTAATTAAGCACAATG+TGG | - | chr2_1:14968509-14968528 | None:intergenic | 30.0% | |
| !! | TTGTCAATTTCTTAGTTTGC+TGG | - | chr2_1:14968592-14968611 | None:intergenic | 30.0% |
| TGAAACTTATGATTCCTAGT+TGG | + | chr2_1:14968836-14968855 | Msa0197220:intron | 30.0% | |
| !! | CCAACAACTTGTTAAACAAA+TGG | - | chr2_1:14968901-14968920 | None:intergenic | 30.0% |
| CCATTTGTTTAACAAGTTGT+TGG | + | chr2_1:14968898-14968917 | Msa0197220:intron | 30.0% | |
| ! | ACAAGTTAACATTTTCCATC+AGG | - | chr2_1:14969019-14969038 | None:intergenic | 30.0% |
| !!! | TTCTTTTGGGTTACTTAACA+TGG | + | chr2_1:14969142-14969161 | Msa0197220:intron | 30.0% |
| !!! | TCTTTTGGGTTACTTAACAT+GGG | + | chr2_1:14969143-14969162 | Msa0197220:intron | 30.0% |
| !!! | TTTCCTCTTTGTTGTTCTTT+TGG | + | chr2_1:14969230-14969249 | Msa0197220:intron | 30.0% |
| GTTCTGTACAATTTCCTATT+AGG | + | chr2_1:14969412-14969431 | Msa0197220:intron | 30.0% | |
| CAATGAATGGAAATGGAAAT+GGG | - | chr2_1:14969474-14969493 | None:intergenic | 30.0% | |
| ACAATGAATGGAAATGGAAA+TGG | - | chr2_1:14969475-14969494 | None:intergenic | 30.0% | |
| CTCATCAATGTAACAATGAA+TGG | - | chr2_1:14969487-14969506 | None:intergenic | 30.0% | |
| !! | TTTTAAGTAGGATTGTCATG+TGG | - | chr2_1:14969547-14969566 | None:intergenic | 30.0% |
| TATCTATAAGCAACTTCCAA+GGG | - | chr2_1:14969763-14969782 | None:intergenic | 30.0% | |
| ATATCTATAAGCAACTTCCA+AGG | - | chr2_1:14969764-14969783 | None:intergenic | 30.0% | |
| TTGCTAAAATGTGATTATCC+AGG | + | chr2_1:14970029-14970048 | Msa0197220:CDS | 30.0% | |
| TAAAATGTGATTATCCAGGT+TGG | + | chr2_1:14970033-14970052 | Msa0197220:intron | 30.0% | |
| ! | TTACAAAATTGATGATTGCG+GGG | + | chr2_1:14970102-14970121 | Msa0197220:intron | 30.0% |
| TATACATTCTCTTGTAACTC+AGG | + | chr2_1:14970153-14970172 | Msa0197220:intron | 30.0% | |
| ACAACAAATCTATCTGTTGT+AGG | - | chr2_1:14970198-14970217 | None:intergenic | 30.0% | |
| !! | AGATAGATTTGTTGTTGTCA+TGG | + | chr2_1:14970203-14970222 | Msa0197220:CDS | 30.0% |
| ! | TTTTGTTCTGATATTGTCTG+CGG | + | chr2_1:14970237-14970256 | Msa0197220:intron | 30.0% |
| !! | TATTTGTGTCTTTTAGCTGT+TGG | + | chr2_1:14970603-14970622 | Msa0197220:intron | 30.0% |
| ! | ATACTTGTTGAGTATCAACT+TGG | - | chr2_1:14970855-14970874 | None:intergenic | 30.0% |
| ATCACAAGATGGTAAAATGA+TGG | - | chr2_1:14971122-14971141 | None:intergenic | 30.0% | |
| ! | TGGATTTTCAAATCACAAGA+TGG | - | chr2_1:14971133-14971152 | None:intergenic | 30.0% |
| ATTACAGTGTTGTCATTCTT+TGG | - | chr2_1:14971153-14971172 | None:intergenic | 30.0% | |
| AATGACAACACTGTAATAGT+TGG | + | chr2_1:14971156-14971175 | Msa0197220:intron | 30.0% | |
| ATGCTTACAACACTAAACAT+TGG | - | chr2_1:14971188-14971207 | None:intergenic | 30.0% | |
| AATGATAAGCCTACAAATGA+AGG | + | chr2_1:14971308-14971327 | Msa0197220:CDS | 30.0% | |
| CATAATTAGCCATCTTAAGA+AGG | + | chr2_1:14971564-14971583 | Msa0197220:CDS | 30.0% | |
| AGAAATTAAGGAACCAAAGT+AGG | - | chr2_1:14971688-14971707 | None:intergenic | 30.0% | |
| ! | CCTGTTTTGTAAAACATAAC+AGG | - | chr2_1:14971792-14971811 | None:intergenic | 30.0% |
| ! | CCTGTTATGTTTTACAAAAC+AGG | + | chr2_1:14971789-14971808 | Msa0197220:intron | 30.0% |
| TGAATTTCTTCAAAAGCTCT+GGG | - | chr2_1:14971960-14971979 | None:intergenic | 30.0% | |
| AGTTATTGAAGAGTTGTAGA+TGG | + | chr2_1:14972101-14972120 | Msa0197220:three_prime_UTR | 30.0% | |
| AAACTGCTACGTATCAACAA+TGG | + | chr2_1:14967369-14967388 | Msa0197220:CDS | 35.0% | |
| TGGTTCAATTTAGCAGATTC+AGG | + | chr2_1:14967389-14967408 | Msa0197220:CDS | 35.0% | |
| !! | TTTGATTTGTTACGAGCAGT+TGG | + | chr2_1:14967724-14967743 | Msa0197220:intron | 35.0% |
| GACATTTCTGATCGAAAATG+TGG | - | chr2_1:14968038-14968057 | None:intergenic | 35.0% | |
| GTTAAACCACCTGTTATTGA+AGG | + | chr2_1:14968438-14968457 | Msa0197220:CDS | 35.0% | |
| TCTAATCCTTCAATAACAGG+TGG | - | chr2_1:14968447-14968466 | None:intergenic | 35.0% | |
| TCTAACCATTCACTTCAGAT+GGG | - | chr2_1:14968622-14968641 | None:intergenic | 35.0% | |
| TTCTAACCATTCACTTCAGA+TGG | - | chr2_1:14968623-14968642 | None:intergenic | 35.0% | |
| AACCATGAGTTAGGTAGAAA+CGG | - | chr2_1:14968746-14968765 | None:intergenic | 35.0% | |
| ATCACCTTAAAGCCACAAAA+AGG | - | chr2_1:14968864-14968883 | None:intergenic | 35.0% | |
| CATCCAAAAGAACAACAAAG+AGG | - | chr2_1:14969236-14969255 | None:intergenic | 35.0% | |
| ! | TGTTGTTCTTTTGGATGAAG+CGG | + | chr2_1:14969239-14969258 | Msa0197220:intron | 35.0% |
| !! | ATTACTGCCCACTTTTACAT+TGG | + | chr2_1:14969267-14969286 | Msa0197220:intron | 35.0% |
| AAGGAAAAATAAGGCGATTG+TGG | - | chr2_1:14969334-14969353 | None:intergenic | 35.0% | |
| !!! | ACAATCGCCTTATTTTTCCT+TGG | + | chr2_1:14969333-14969352 | Msa0197220:intron | 35.0% |
| CTGTACAATTTCCTATTAGG+AGG | + | chr2_1:14969415-14969434 | Msa0197220:intron | 35.0% | |
| ATGAAACACTACCTCCTAAT+AGG | - | chr2_1:14969429-14969448 | None:intergenic | 35.0% | |
| CACTTGCACAAACCAATATT+TGG | + | chr2_1:14969513-14969532 | Msa0197220:intron | 35.0% | |
| GTGGACATGTTTCCAAATAT+TGG | - | chr2_1:14969528-14969547 | None:intergenic | 35.0% | |
| ACTATTGATGTAACTGCACT+TGG | - | chr2_1:14969703-14969722 | None:intergenic | 35.0% | |
| GCAGTTACATCAATAGTTGA+TGG | + | chr2_1:14969706-14969725 | Msa0197220:CDS | 35.0% | |
| TACGTGCAATTGACGAAATT+TGG | - | chr2_1:14969849-14969868 | None:intergenic | 35.0% | |
| TTTAGCATCAAAATCGCTGT+TGG | - | chr2_1:14969952-14969971 | None:intergenic | 35.0% | |
| CAATAACAATTCAACCAACC+TGG | - | chr2_1:14970050-14970069 | None:intergenic | 35.0% | |
| ACAATCAGAAAAACATGGTG+TGG | + | chr2_1:14970273-14970292 | Msa0197220:intron | 35.0% | |
| CAATCAGAAAAACATGGTGT+GGG | + | chr2_1:14970274-14970293 | Msa0197220:intron | 35.0% | |
| ATGTGTTCTAGTAGTGTTGT+TGG | + | chr2_1:14970351-14970370 | Msa0197220:intron | 35.0% | |
| TTAACAGCTATAGTGTTTCC+CGG | - | chr2_1:14970438-14970457 | None:intergenic | 35.0% | |
| AATGCTGATATGCCTTTCAA+TGG | + | chr2_1:14970456-14970475 | Msa0197220:CDS | 35.0% | |
| ! | ACATCGATTGTCATTTGACT+TGG | - | chr2_1:14970567-14970586 | None:intergenic | 35.0% |
| GTTGGATGAAGTAACAATTG+TGG | + | chr2_1:14970621-14970640 | Msa0197220:CDS | 35.0% | |
| CAAAGAAGCTATGATTTCAC+TGG | + | chr2_1:14970682-14970701 | Msa0197220:CDS | 35.0% | |
| !! | ATTTCACTGGTGTTGTATCT+TGG | + | chr2_1:14970695-14970714 | Msa0197220:CDS | 35.0% |
| GAGAAGAATGACATCACATT+TGG | - | chr2_1:14970728-14970747 | None:intergenic | 35.0% | |
| CGTGTAATTTCATCTTTACG+AGG | + | chr2_1:14970790-14970809 | Msa0197220:CDS | 35.0% | |
| CTGACTTATTCAAAACCACA+CGG | - | chr2_1:14970831-14970850 | None:intergenic | 35.0% | |
| TCAGCAAATCCTTCATTTGT+AGG | - | chr2_1:14971320-14971339 | None:intergenic | 35.0% | |
| ! | AATGAGTTTTTGTTGAGCCT+TGG | - | chr2_1:14971614-14971633 | None:intergenic | 35.0% |
| TCTCGACAATGAATTTGCAA+AGG | + | chr2_1:14971639-14971658 | Msa0197220:CDS | 35.0% | |
| TCTATGGCTTGAATCATCTT+TGG | - | chr2_1:14971916-14971935 | None:intergenic | 35.0% | |
| ATATCCTAGCATGTCATCTA+TGG | - | chr2_1:14971932-14971951 | None:intergenic | 35.0% | |
| CTGAATTTCTTCAAAAGCTC+TGG | - | chr2_1:14971961-14971980 | None:intergenic | 35.0% | |
| TTCTCAACTCAAGCAGCTTT+GGG | + | chr2_1:14967558-14967577 | Msa0197220:CDS | 40.0% | |
| CTTGCTGATAACAAACGACA+AGG | + | chr2_1:14967583-14967602 | Msa0197220:CDS | 40.0% | |
| GATCGAAAATGTGGTATCCT+GGG | - | chr2_1:14968029-14968048 | None:intergenic | 40.0% | |
| TGATCGAAAATGTGGTATCC+TGG | - | chr2_1:14968030-14968049 | None:intergenic | 40.0% | |
| CTAACCATTCACTTCAGATG+GGG | - | chr2_1:14968621-14968640 | None:intergenic | 40.0% | |
| AACCGTTTCTACCTAACTCA+TGG | + | chr2_1:14968741-14968760 | Msa0197220:CDS | 40.0% | |
| TTTGCAGTGAACCATGAGTT+AGG | - | chr2_1:14968755-14968774 | None:intergenic | 40.0% | |
| GTTTAACAAGTTGTTGGTGC+TGG | + | chr2_1:14968904-14968923 | Msa0197220:intron | 40.0% | |
| TTACTTAACATGGGCCCTAA+GGG | + | chr2_1:14969152-14969171 | Msa0197220:intron | 40.0% | |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | chr2_1:14969169-14969188 | None:intergenic | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | chr2_1:14969170-14969189 | None:intergenic | 40.0% |
| !! | GATTCTTTTTGGTGCGAATG+TGG | + | chr2_1:14969374-14969393 | Msa0197220:intron | 40.0% |
| GAATGGAAATGGAAATGGGA+GGG | - | chr2_1:14969470-14969489 | None:intergenic | 40.0% | |
| TGAATGGAAATGGAAATGGG+AGG | - | chr2_1:14969471-14969490 | None:intergenic | 40.0% | |
| ATTGATGTAACTGCACTTGG+AGG | - | chr2_1:14969700-14969719 | None:intergenic | 40.0% | |
| ! | TGATTTTGTATCTCCGTTGC+TGG | + | chr2_1:14969786-14969805 | Msa0197220:CDS | 40.0% |
| ! | AAATCGCTGTTGGTCTGAAA+GGG | - | chr2_1:14969942-14969961 | None:intergenic | 40.0% |
| ! | AAAATCGCTGTTGGTCTGAA+AGG | - | chr2_1:14969943-14969962 | None:intergenic | 40.0% |
| !! | CGATTTTGATGCTAAACCCA+TGG | + | chr2_1:14969956-14969975 | Msa0197220:CDS | 40.0% |
| GCTTCTTGGTCAATACTCTA+CGG | + | chr2_1:14969983-14970002 | Msa0197220:CDS | 40.0% | |
| CTTCTTGGTCAATACTCTAC+GGG | + | chr2_1:14969984-14970003 | Msa0197220:CDS | 40.0% | |
| AATCTATCTGTTGTAGGCTC+TGG | - | chr2_1:14970192-14970211 | None:intergenic | 40.0% | |
| TATAGTCTGGTCCTGATGAA+AGG | + | chr2_1:14970406-14970425 | Msa0197220:intron | 40.0% | |
| !! | TCCTGATGAAAGGAGTATTC+CGG | + | chr2_1:14970416-14970435 | Msa0197220:CDS | 40.0% |
| AAAGTTGTCAGGCCATTGAA+AGG | - | chr2_1:14970471-14970490 | None:intergenic | 40.0% | |
| ! | TTCAATGGCCTGACAACTTT+TGG | + | chr2_1:14970471-14970490 | Msa0197220:CDS | 40.0% |
| ATGAACCTCCAAAAGTTGTC+AGG | - | chr2_1:14970482-14970501 | None:intergenic | 40.0% | |
| ! | TTGTGTCCTTTGTTTCTCTC+CGG | - | chr2_1:14970665-14970684 | None:intergenic | 40.0% |
| CAAGCTTATGTGGATCGAAT+AGG | - | chr2_1:14970750-14970769 | None:intergenic | 40.0% | |
| TCACTGATGTCAAGCTTATG+TGG | - | chr2_1:14970760-14970779 | None:intergenic | 40.0% | |
| TTGCAGCTTATGAGAGTCTA+TGG | + | chr2_1:14970963-14970982 | Msa0197220:intron | 40.0% | |
| AAGTTGCGCGTGTATACATT+GGG | + | chr2_1:14971027-14971046 | Msa0197220:CDS | 40.0% | |
| !! | AAGGATTTGCTGATCCACTA+GGG | + | chr2_1:14971327-14971346 | Msa0197220:CDS | 40.0% |
| ! | ACGAAGAGATTTTTCCCTAG+TGG | - | chr2_1:14971344-14971363 | None:intergenic | 40.0% |
| AGGGAAAAATCTCTTCGTGA+AGG | + | chr2_1:14971346-14971365 | Msa0197220:CDS | 40.0% | |
| TTTGCTGGATATCCCAAAGA+AGG | + | chr2_1:14971391-14971410 | Msa0197220:CDS | 40.0% | |
| GATGATGACATATCACGAAC+TGG | + | chr2_1:14971489-14971508 | Msa0197220:intron | 40.0% | |
| TTGGCATCTCCTTCTTAAGA+TGG | - | chr2_1:14971576-14971595 | None:intergenic | 40.0% | |
| AAGGAGATGCCAACAATGAT+GGG | + | chr2_1:14971583-14971602 | Msa0197220:CDS | 40.0% | |
| AAAGTAGGCAAAAGTGAAGG+TGG | - | chr2_1:14971673-14971692 | None:intergenic | 40.0% | |
| !! | ACCTTCACTTTTGCCTACTT+TGG | + | chr2_1:14971672-14971691 | Msa0197220:CDS | 40.0% |
| ACCAAAGTAGGCAAAAGTGA+AGG | - | chr2_1:14971676-14971695 | None:intergenic | 40.0% | |
| !!! | CACTTCAGAGAAGTTTTGAG+TGG | + | chr2_1:14971859-14971878 | Msa0197220:CDS | 40.0% |
| !! | AGGGGTATCTTCCTTTCTTA+AGG | - | chr2_1:14972188-14972207 | None:intergenic | 40.0% |
| GTTCTCAACTCAAGCAGCTT+TGG | + | chr2_1:14967557-14967576 | Msa0197220:CDS | 45.0% | |
| TGAGTTCGTTACTGCTATGC+AGG | + | chr2_1:14967621-14967640 | Msa0197220:CDS | 45.0% | |
| TGTCGTTCATTGACATACCC+AGG | + | chr2_1:14968009-14968028 | Msa0197220:intron | 45.0% | |
| ! | ACTACCCCATCTGAAGTGAA+TGG | + | chr2_1:14968614-14968633 | Msa0197220:CDS | 45.0% |
| GAGTTAGGTAGAAACGGTTG+AGG | - | chr2_1:14968740-14968759 | None:intergenic | 45.0% | |
| ! | TCCTAGTTGGAGCCTTTTTG+TGG | + | chr2_1:14968849-14968868 | Msa0197220:intron | 45.0% |
| !! | GGAGCCTTTTTGTGGCTTTA+AGG | + | chr2_1:14968857-14968876 | Msa0197220:intron | 45.0% |
| GTTACTTAACATGGGCCCTA+AGG | + | chr2_1:14969151-14969170 | Msa0197220:intron | 45.0% | |
| !! | CTTTTTGGTGCGAATGTGGT+TGG | + | chr2_1:14969378-14969397 | Msa0197220:intron | 45.0% |
| GGAAATGGGAGGGCAAAATA+AGG | - | chr2_1:14969460-14969479 | None:intergenic | 45.0% | |
| TACTGACAGACTAAAGCCCT+TGG | + | chr2_1:14969744-14969763 | Msa0197220:CDS | 45.0% | |
| ! | CAAATGCCACTTACCAGCAA+CGG | - | chr2_1:14969802-14969821 | None:intergenic | 45.0% |
| AAACCCATGGTCATGCTTCT+TGG | + | chr2_1:14969969-14969988 | Msa0197220:CDS | 45.0% | |
| ! | TGACCAAGAAGCATGACCAT+GGG | - | chr2_1:14969975-14969994 | None:intergenic | 45.0% |
| ! | TTGACCAAGAAGCATGACCA+TGG | - | chr2_1:14969976-14969995 | None:intergenic | 45.0% |
| TGATGATTGCGGGGCATAAT+TGG | + | chr2_1:14970111-14970130 | Msa0197220:intron | 45.0% | |
| GATGATTGCGGGGCATAATT+GGG | + | chr2_1:14970112-14970131 | Msa0197220:intron | 45.0% | |
| ! | TGTAACTCAGGAGCACACAT+TGG | + | chr2_1:14970165-14970184 | Msa0197220:intron | 45.0% |
| ! | GTAACTCAGGAGCACACATT+GGG | + | chr2_1:14970166-14970185 | Msa0197220:intron | 45.0% |
| !! | CCTGATGAAAGGAGTATTCC+GGG | + | chr2_1:14970417-14970436 | Msa0197220:CDS | 45.0% |
| ! | AATGGCCTGACAACTTTTGG+AGG | + | chr2_1:14970474-14970493 | Msa0197220:CDS | 45.0% |
| GTAACAATTGTGGACACTCC+TGG | + | chr2_1:14970631-14970650 | Msa0197220:CDS | 45.0% | |
| TCCTATCCGGAGAGAAACAA+AGG | + | chr2_1:14970656-14970675 | Msa0197220:CDS | 45.0% | |
| ! | TCCTTTGTTTCTCTCCGGAT+AGG | - | chr2_1:14970660-14970679 | None:intergenic | 45.0% |
| TTCATCTTTACGAGGCAACG+AGG | + | chr2_1:14970798-14970817 | Msa0197220:CDS | 45.0% | |
| !! | GAGTCTATGGAGCATTGATG+TGG | + | chr2_1:14970976-14970995 | Msa0197220:CDS | 45.0% |
| ATGTATACACGCGCAACTTC+AGG | - | chr2_1:14971026-14971045 | None:intergenic | 45.0% | |
| GAAGTTGCGCGTGTATACAT+TGG | + | chr2_1:14971026-14971045 | Msa0197220:CDS | 45.0% | |
| !! | GAAGGATTTGCTGATCCACT+AGG | + | chr2_1:14971326-14971345 | Msa0197220:CDS | 45.0% |
| GAAGGAACAGAACGATCTGT+TGG | + | chr2_1:14971364-14971383 | Msa0197220:CDS | 45.0% | |
| GACGATCACAAGCCTTCTTT+GGG | - | chr2_1:14971406-14971425 | None:intergenic | 45.0% | |
| CAAAGAAGGCTTGTGATCGT+CGG | + | chr2_1:14971405-14971424 | Msa0197220:CDS | 45.0% | |
| AAAGAAGGCTTGTGATCGTC+GGG | + | chr2_1:14971406-14971425 | Msa0197220:CDS | 45.0% | |
| GAAGGAGATGCCAACAATGA+TGG | + | chr2_1:14971582-14971601 | Msa0197220:CDS | 45.0% | |
| !! | TTGGCTTTGCCCATCATTGT+TGG | - | chr2_1:14971595-14971614 | None:intergenic | 45.0% |
| !! | AACAATGATGGGCAAAGCCA+AGG | + | chr2_1:14971594-14971613 | Msa0197220:CDS | 45.0% |
| !! | AGAGAGTATCATCTACCACC+TGG | + | chr2_1:14971817-14971836 | Msa0197220:CDS | 45.0% |
| TCAACACTGGGAAAATCACC+AGG | - | chr2_1:14971838-14971857 | None:intergenic | 45.0% | |
| !! | TCTCTGAAGTGCTCAACACT+GGG | - | chr2_1:14971850-14971869 | None:intergenic | 45.0% |
| !! | TTCTCTGAAGTGCTCAACAC+TGG | - | chr2_1:14971851-14971870 | None:intergenic | 45.0% |
| CAAGCCATAGATGACATGCT+AGG | + | chr2_1:14971925-14971944 | Msa0197220:CDS | 45.0% | |
| GATGGAGATGGACGAATCAG+TGG | + | chr2_1:14967493-14967512 | Msa0197220:intron | 50.0% | |
| AGGTAGAAACGGTTGAGGCT+TGG | - | chr2_1:14968735-14968754 | None:intergenic | 50.0% | |
| GCCACAAAAAGGCTCCAACT+AGG | - | chr2_1:14968853-14968872 | None:intergenic | 50.0% | |
| GTATCTCCGTTGCTGGTAAG+TGG | + | chr2_1:14969793-14969812 | Msa0197220:intron | 50.0% | |
| CCCGGAATACTCCTTTCATC+AGG | - | chr2_1:14970420-14970439 | None:intergenic | 50.0% | |
| !! | GGAGCATTGATGTGGTCGTT+AGG | + | chr2_1:14970984-14971003 | Msa0197220:CDS | 50.0% |
| TGCGCGTGTATACATTGGGT+AGG | + | chr2_1:14971031-14971050 | Msa0197220:intron | 50.0% | |
| CGATCTGTTGGCAGATTTGC+TGG | + | chr2_1:14971376-14971395 | Msa0197220:CDS | 50.0% | |
| CGACGATCACAAGCCTTCTT+TGG | - | chr2_1:14971407-14971426 | None:intergenic | 50.0% | |
| GTAGGCAAAAGTGAAGGTGG+AGG | - | chr2_1:14971670-14971689 | None:intergenic | 50.0% | |
| ACACTGGGAAAATCACCAGG+TGG | - | chr2_1:14971835-14971854 | None:intergenic | 50.0% | |
| !! | TTGGTGTCGCTTGCACAAGC+AGG | + | chr2_1:14967743-14967762 | Msa0197220:CDS | 55.0% |
| GACACTCCTGGTGTCCTATC+CGG | + | chr2_1:14970643-14970662 | Msa0197220:CDS | 55.0% | |
| TTCTCTCCGGATAGGACACC+AGG | - | chr2_1:14970652-14970671 | None:intergenic | 55.0% | |
| CAACGAGGACAAGATCCGTG+TGG | + | chr2_1:14970813-14970832 | Msa0197220:CDS | 55.0% | |
| AAGGCTTGTGATCGTCGGGT+AGG | + | chr2_1:14971410-14971429 | Msa0197220:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 14967295 | 14972224 | 14967295 | ID=Msa0197220;Name=Msa0197220 |
| chr2_1 | mRNA | 14967295 | 14972224 | 14967295 | ID=Msa0197220-mRNA-1;Parent=Msa0197220;Name=Msa0197220-mRNA-1;_AED=0.11;_eAED=0.12;_QI=46|0.92|0.93|1|1|1|15|228|551 |
| chr2_1 | exon | 14967295 | 14967410 | 14967295 | ID=Msa0197220-mRNA-1:exon:6348;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14967494 | 14967642 | 14967494 | ID=Msa0197220-mRNA-1:exon:6349;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14967743 | 14967800 | 14967743 | ID=Msa0197220-mRNA-1:exon:6350;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14968424 | 14968479 | 14968424 | ID=Msa0197220-mRNA-1:exon:6351;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14968593 | 14968635 | 14968593 | ID=Msa0197220-mRNA-1:exon:6352;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14968726 | 14968787 | 14968726 | ID=Msa0197220-mRNA-1:exon:6353;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14969694 | 14969807 | 14969694 | ID=Msa0197220-mRNA-1:exon:6354;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14969948 | 14970050 | 14969948 | ID=Msa0197220-mRNA-1:exon:6355;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14970175 | 14970224 | 14970175 | ID=Msa0197220-mRNA-1:exon:6356;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14970411 | 14970539 | 14970411 | ID=Msa0197220-mRNA-1:exon:6357;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14970619 | 14970870 | 14970619 | ID=Msa0197220-mRNA-1:exon:6358;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14970969 | 14971048 | 14970969 | ID=Msa0197220-mRNA-1:exon:6359;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14971301 | 14971427 | 14971301 | ID=Msa0197220-mRNA-1:exon:6360;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14971517 | 14971693 | 14971517 | ID=Msa0197220-mRNA-1:exon:6361;Parent=Msa0197220-mRNA-1 |
| chr2_1 | exon | 14971811 | 14972224 | 14971811 | ID=Msa0197220-mRNA-1:exon:6362;Parent=Msa0197220-mRNA-1 |
| chr2_1 | five_prime_UTR | 14967295 | 14967340 | 14967295 | ID=Msa0197220-mRNA-1:five_prime_utr;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14967341 | 14967410 | 14967341 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14967494 | 14967642 | 14967494 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14967743 | 14967800 | 14967743 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14968424 | 14968479 | 14968424 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14968593 | 14968635 | 14968593 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14968726 | 14968787 | 14968726 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14969694 | 14969807 | 14969694 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14969948 | 14970050 | 14969948 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14970175 | 14970224 | 14970175 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14970411 | 14970539 | 14970411 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14970619 | 14970870 | 14970619 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14970969 | 14971048 | 14970969 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14971301 | 14971427 | 14971301 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14971517 | 14971693 | 14971517 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | CDS | 14971811 | 14971996 | 14971811 | ID=Msa0197220-mRNA-1:cds;Parent=Msa0197220-mRNA-1 |
| chr2_1 | three_prime_UTR | 14971997 | 14972224 | 14971997 | ID=Msa0197220-mRNA-1:three_prime_utr;Parent=Msa0197220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
