Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197740 | XP_013462948.1 | 93.947 | 380 | 21 | 2 | 1 | 380 | 1 | 378 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197740 | sp|Q39117|TGT2_ARATH | 37.879 | 264 | 127 | 5 | 103 | 355 | 253 | 490 | 5.24e-44 | 163 |
| Msa0197740 | sp|Q39117|TGT2_ARATH | 41.176 | 85 | 49 | 1 | 264 | 348 | 41 | 124 | 2.97e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197740 | A0A072V6L9 | 93.947 | 380 | 21 | 2 | 1 | 380 | 1 | 378 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0197740 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197740 | Msa0239620 | 0.926310 | 5.586089e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197740 | MtrunA17_Chr2g0290511 | 93.947 | 380 | 21 | 2 | 1 | 380 | 1 | 378 | 0.0 | 647 |
| Msa0197740 | MtrunA17_Chr1g0201941 | 38.387 | 310 | 152 | 7 | 77 | 352 | 238 | 542 | 2.84e-53 | 186 |
| Msa0197740 | MtrunA17_Chr1g0201941 | 41.379 | 87 | 50 | 1 | 264 | 350 | 57 | 142 | 1.79e-15 | 78.2 |
| Msa0197740 | MtrunA17_Chr1g0201911 | 37.165 | 261 | 121 | 6 | 106 | 352 | 229 | 460 | 5.26e-43 | 157 |
| Msa0197740 | MtrunA17_Chr1g0201911 | 42.529 | 87 | 49 | 1 | 264 | 350 | 55 | 140 | 3.21e-15 | 77.0 |
| Msa0197740 | MtrunA17_Chr1g0190851 | 31.935 | 310 | 154 | 8 | 105 | 374 | 238 | 530 | 1.09e-34 | 134 |
| Msa0197740 | MtrunA17_Chr6g0463941 | 60.870 | 92 | 36 | 0 | 261 | 352 | 461 | 552 | 2.73e-33 | 131 |
| Msa0197740 | MtrunA17_Chr6g0463941 | 38.710 | 93 | 56 | 1 | 264 | 356 | 55 | 146 | 8.10e-16 | 79.0 |
| Msa0197740 | MtrunA17_Chr7g0273941 | 30.233 | 258 | 139 | 8 | 115 | 351 | 240 | 477 | 2.04e-29 | 118 |
| Msa0197740 | MtrunA17_Chr1g0198171 | 26.939 | 245 | 129 | 7 | 96 | 333 | 283 | 484 | 2.45e-16 | 80.5 |
| Msa0197740 | MtrunA17_Chr1g0198171 | 33.333 | 132 | 83 | 4 | 220 | 350 | 73 | 200 | 1.76e-13 | 71.6 |
| Msa0197740 | MtrunA17_Chr1g0179191 | 37.755 | 98 | 59 | 2 | 255 | 351 | 122 | 218 | 6.01e-14 | 73.2 |
| Msa0197740 | MtrunA17_Chr7g0265831 | 36.735 | 98 | 60 | 2 | 255 | 351 | 106 | 202 | 4.74e-13 | 70.5 |
| Msa0197740 | MtrunA17_Chr7g0265831 | 29.091 | 165 | 93 | 5 | 101 | 241 | 268 | 432 | 5.91e-11 | 63.9 |
| Msa0197740 | MtrunA17_Chr5g0409071 | 31.683 | 101 | 64 | 2 | 260 | 358 | 41 | 138 | 5.56e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197740 | AT5G47660.1 | 41.200 | 250 | 121 | 3 | 106 | 355 | 169 | 392 | 3.77e-51 | 176 |
| Msa0197740 | AT1G76890.2 | 37.879 | 264 | 127 | 5 | 103 | 355 | 253 | 490 | 5.33e-45 | 163 |
| Msa0197740 | AT1G76890.2 | 41.176 | 85 | 49 | 1 | 264 | 348 | 41 | 124 | 3.02e-14 | 74.7 |
| Msa0197740 | AT1G76880.1 | 37.097 | 248 | 145 | 4 | 118 | 359 | 257 | 499 | 3.81e-41 | 153 |
| Msa0197740 | AT1G76880.1 | 41.379 | 87 | 50 | 1 | 264 | 350 | 61 | 146 | 2.30e-14 | 75.1 |
| Msa0197740 | AT5G28300.1 | 35.271 | 258 | 146 | 5 | 115 | 351 | 299 | 556 | 5.18e-37 | 142 |
| Msa0197740 | AT1G33240.3 | 54.839 | 93 | 42 | 0 | 264 | 356 | 435 | 527 | 6.21e-29 | 118 |
| Msa0197740 | AT1G33240.3 | 39.080 | 87 | 52 | 1 | 264 | 350 | 62 | 147 | 2.42e-13 | 72.0 |
| Msa0197740 | AT1G33240.1 | 54.839 | 93 | 42 | 0 | 264 | 356 | 435 | 527 | 8.61e-29 | 118 |
| Msa0197740 | AT1G33240.1 | 39.080 | 87 | 52 | 1 | 264 | 350 | 62 | 147 | 2.47e-13 | 72.0 |
| Msa0197740 | AT1G33240.2 | 54.839 | 93 | 42 | 0 | 264 | 356 | 396 | 488 | 1.17e-28 | 117 |
| Msa0197740 | AT5G03680.1 | 29.181 | 281 | 158 | 7 | 76 | 344 | 255 | 506 | 1.59e-18 | 87.8 |
| Msa0197740 | AT5G03680.1 | 41.573 | 89 | 50 | 2 | 264 | 351 | 119 | 206 | 2.09e-14 | 75.1 |
| Msa0197740 | AT3G10000.1 | 35.433 | 127 | 77 | 3 | 226 | 351 | 54 | 176 | 1.88e-16 | 81.3 |
| Msa0197740 | AT3G10000.2 | 33.333 | 126 | 71 | 3 | 226 | 351 | 54 | 166 | 1.33e-13 | 72.4 |
Find 145 sgRNAs with CRISPR-Local
Find 438 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAGGGTTACTGCCTTAC+TGG | 0.202198 | 2_1:-15928682 | None:intergenic |
| AGACGGGTCCTCGACCTTTA+TGG | 0.221031 | 2_1:-15928927 | None:intergenic |
| GTTACTGCCTTACTGGTTAC+TGG | 0.258600 | 2_1:-15928675 | None:intergenic |
| TACAAGAACATGCAAAATTT+AGG | 0.284429 | 2_1:-15930900 | None:intergenic |
| ATCGCTGATTCAGAAACTAT+TGG | 0.316999 | 2_1:+15930198 | Msa0197740:CDS |
| TTGCCCTTACTTTGACGAAT+TGG | 0.318055 | 2_1:+15930675 | Msa0197740:CDS |
| AAATTTGATAATCATAAATA+TGG | 0.319593 | 2_1:+15930791 | Msa0197740:exon |
| GGAGATAGCTGGAGCATTGC+AGG | 0.341688 | 2_1:+15930540 | Msa0197740:CDS |
| TGGGATCGAAAGGATCAATA+TGG | 0.344397 | 2_1:+15930515 | Msa0197740:CDS |
| TTGGACAATCTGTATAGAAA+TGG | 0.356199 | 2_1:+15930694 | Msa0197740:CDS |
| GGAACACAAGTTCGGTCATA+TGG | 0.359379 | 2_1:+15930495 | Msa0197740:CDS |
| CGGCCCCACGTACTGGATTA+AGG | 0.364776 | 2_1:-15930368 | None:intergenic |
| CGAAGAAGTGCAAGGAGAAA+TGG | 0.367920 | 2_1:+15930584 | Msa0197740:CDS |
| GGGAAACCAGGAGGAGGAGG+AGG | 0.384212 | 2_1:-15928878 | None:intergenic |
| TCGCTGATTCAGAAACTATT+GGG | 0.386057 | 2_1:+15930199 | Msa0197740:CDS |
| CTTATTCCGCTTCCTTCTGC+TGG | 0.387343 | 2_1:-15930244 | None:intergenic |
| TTCCCTTATGGAAACATTGT+TGG | 0.404001 | 2_1:-15930752 | None:intergenic |
| GGTAGAGGGGTGTGGTGAGA+AGG | 0.405204 | 2_1:-15928899 | None:intergenic |
| CCTCAGCCGGCCCCACGTAC+TGG | 0.407040 | 2_1:-15930375 | None:intergenic |
| GTCGAGGACCCGTCTCGATC+CGG | 0.413921 | 2_1:+15928935 | Msa0197740:CDS |
| CCCTCTACCACCTTCCATAA+AGG | 0.418335 | 2_1:+15928913 | Msa0197740:CDS |
| AGGTCGCCGGAGTCGGGAAA+TGG | 0.420361 | 2_1:-15928779 | None:intergenic |
| AGCTGGAGCATTGCAGGGCA+TGG | 0.423836 | 2_1:+15930546 | Msa0197740:CDS |
| AAAACATCAATAAGTACTAT+AGG | 0.424007 | 2_1:+15930608 | Msa0197740:CDS |
| GAAGGGAAACCAGGAGGAGG+AGG | 0.425874 | 2_1:-15928881 | None:intergenic |
| TTGTTATTGCTCACCTCAGC+CGG | 0.426631 | 2_1:-15930388 | None:intergenic |
| GCGATCCAAGTAACAGTAGA+TGG | 0.427115 | 2_1:+15930428 | Msa0197740:CDS |
| CGACCCCACGTTGTGGGTCA+AGG | 0.431970 | 2_1:-15930314 | None:intergenic |
| TTGTCCAATTCGTCAAAGTA+AGG | 0.432653 | 2_1:-15930679 | None:intergenic |
| TCATCATTTCAGCTCATCTT+CGG | 0.432989 | 2_1:+15929901 | Msa0197740:intron |
| AATGGGTCCTTGGAGAGAAA+TGG | 0.436187 | 2_1:+15930712 | Msa0197740:CDS |
| GGGGATTGTGGTGGTTGGAG+AGG | 0.440819 | 2_1:-15928820 | None:intergenic |
| AGAGCAGATGCATAAAGAAT+TGG | 0.442580 | 2_1:+15930045 | Msa0197740:CDS |
| ATACCAACAATGTTTCCATA+AGG | 0.443747 | 2_1:+15930749 | Msa0197740:CDS |
| GAGGAGGTTCATGCTGTCCA+TGG | 0.444403 | 2_1:-15928738 | None:intergenic |
| AGCATGGAAGCGCGAGGAGA+TGG | 0.446602 | 2_1:+15930114 | Msa0197740:CDS |
| TTGCAGCAAATTTGGTAAAG+AGG | 0.450584 | 2_1:+15930008 | Msa0197740:CDS |
| ACCTTTATGGAAGGTGGTAG+AGG | 0.453928 | 2_1:-15928914 | None:intergenic |
| AGCGCTTGTACTTCAACATC+TGG | 0.456538 | 2_1:-15930451 | None:intergenic |
| GTTTCTGAATCAGCGATATG+AGG | 0.456889 | 2_1:-15930192 | None:intergenic |
| AAGATAAGGTCGCCGGAGTC+GGG | 0.457626 | 2_1:-15928785 | None:intergenic |
| AGGAGGAGGGATGGACCTGA+TGG | 0.458333 | 2_1:-15928855 | None:intergenic |
| GAGAAAGAGTTCGAGAAAGC+TGG | 0.464906 | 2_1:+15929979 | Msa0197740:CDS |
| CCAGTACGTGGGGCCGGCTG+AGG | 0.465622 | 2_1:+15930375 | Msa0197740:CDS |
| TGTTTCCATAAGGGAAGAAA+AGG | 0.473178 | 2_1:+15930759 | Msa0197740:CDS |
| GACCCGTCTCGATCCGGGTC+GGG | 0.479636 | 2_1:+15928941 | Msa0197740:CDS |
| TGGACAATCTGTATAGAAAT+GGG | 0.482755 | 2_1:+15930695 | Msa0197740:CDS |
| GTGTGGTGAGAAGGGAAACC+AGG | 0.486892 | 2_1:-15928890 | None:intergenic |
| CCGCTTCCTTCTGCTGGTGG+AGG | 0.487836 | 2_1:-15930238 | None:intergenic |
| GTAGAGGGGTGTGGTGAGAA+GGG | 0.489814 | 2_1:-15928898 | None:intergenic |
| TCGAGGACCCGTCTCGATCC+GGG | 0.493085 | 2_1:+15928936 | Msa0197740:CDS |
| GACCCGACCCGGATCGAGAC+GGG | 0.496300 | 2_1:-15928943 | None:intergenic |
| TCTGGCCATCTACTGTTACT+TGG | 0.497676 | 2_1:-15930433 | None:intergenic |
| GAAGATAAGGTCGCCGGAGT+CGG | 0.499156 | 2_1:-15928786 | None:intergenic |
| GCTGTCCATGGGTGTGGTAA+TGG | 0.500042 | 2_1:-15928726 | None:intergenic |
| TGGAAGGTGGTAGAGGGGTG+TGG | 0.500655 | 2_1:-15928907 | None:intergenic |
| CCACAACGTGGGGTCGGCTG+AGG | 0.501288 | 2_1:+15930321 | Msa0197740:CDS |
| CTCAGCCGACCCCACGTTGT+GGG | 0.501316 | 2_1:-15930320 | None:intergenic |
| TCAATATGGGAGGAGATAGC+TGG | 0.501950 | 2_1:+15930529 | Msa0197740:CDS |
| TGCATTTCCATTTCTCTCCA+AGG | 0.502699 | 2_1:-15930719 | None:intergenic |
| AAGAGAAGAGGATGAAGTTG+AGG | 0.502881 | 2_1:+15930264 | Msa0197740:CDS |
| TCTGTATAGAAATGGGTCCT+TGG | 0.503578 | 2_1:+15930702 | Msa0197740:CDS |
| GATTGTGGTGGTTGGAGAGG+AGG | 0.505297 | 2_1:-15928817 | None:intergenic |
| GCAGATGCATAAAGAATTGG+TGG | 0.506304 | 2_1:+15930048 | Msa0197740:CDS |
| GGAGGAGGGATGGACCTGAT+GGG | 0.508730 | 2_1:-15928854 | None:intergenic |
| GGAGGCCGGCGGCGAAGATA+AGG | 0.508923 | 2_1:-15928799 | None:intergenic |
| TACCAACAATGTTTCCATAA+GGG | 0.510070 | 2_1:+15930750 | Msa0197740:CDS |
| ATTCCGCTTCCTTCTGCTGG+TGG | 0.513116 | 2_1:-15930241 | None:intergenic |
| CAGCTCATCTTCGGATGACG+TGG | 0.514862 | 2_1:+15929910 | Msa0197740:intron |
| GTGGTGGTTGGAGAGGAGGC+CGG | 0.515979 | 2_1:-15928813 | None:intergenic |
| CAGTTGGGAGCGGCAAGAAA+CGG | 0.517486 | 2_1:+15930635 | Msa0197740:CDS |
| ATGAAACAAACGGCGGCGTG+AGG | 0.519726 | 2_1:-15928698 | None:intergenic |
| GGATAAAGAGAGAAGAAGCA+TGG | 0.520205 | 2_1:+15930098 | Msa0197740:CDS |
| ACCGCATTGGAACACAAGTT+CGG | 0.524498 | 2_1:+15930487 | Msa0197740:CDS |
| GAAGAAGTGCAAGGAGAAAT+GGG | 0.526951 | 2_1:+15930585 | Msa0197740:CDS |
| AGTACTATAGGAGGACAGTT+GGG | 0.527630 | 2_1:+15930620 | Msa0197740:CDS |
| GTTCATGCTGTCCATGGGTG+TGG | 0.529902 | 2_1:-15928732 | None:intergenic |
| AATGATTGAGAGGATGGAAA+AGG | 0.532492 | 2_1:+15930072 | Msa0197740:CDS |
| CCCACGTTGTGGGTCAAGGG+TGG | 0.532882 | 2_1:-15930310 | None:intergenic |
| CATAAGGGAAGAAAAGGAGC+AGG | 0.532990 | 2_1:+15930765 | Msa0197740:CDS |
| CCTCAGCCGACCCCACGTTG+TGG | 0.533841 | 2_1:-15930321 | None:intergenic |
| TGAAACAAACGGCGGCGTGA+GGG | 0.536561 | 2_1:-15928697 | None:intergenic |
| GGTGGAAATGATTGAGAGGA+TGG | 0.536865 | 2_1:+15930066 | Msa0197740:CDS |
| GCTGGAGCATTGCAGGGCAT+GGG | 0.538046 | 2_1:+15930547 | Msa0197740:CDS |
| CCTTTATGGAAGGTGGTAGA+GGG | 0.540722 | 2_1:-15928913 | None:intergenic |
| CTTAATCCAGTACGTGGGGC+CGG | 0.542332 | 2_1:+15930369 | Msa0197740:CDS |
| GAGGAGGGATGGACCTGATG+GGG | 0.543104 | 2_1:-15928853 | None:intergenic |
| GAACACAAGTTCGGTCATAT+GGG | 0.545310 | 2_1:+15930496 | Msa0197740:CDS |
| GGAGATGGAGAGAATTAAGC+AGG | 0.547111 | 2_1:+15930129 | Msa0197740:CDS |
| GGGATCGAAAGGATCAATAT+GGG | 0.547722 | 2_1:+15930516 | Msa0197740:CDS |
| GTTGCTCCATTTCCCGACTC+CGG | 0.549274 | 2_1:+15928773 | Msa0197740:CDS |
| CCACGTTGTGGGTCAAGGGT+GGG | 0.550717 | 2_1:-15930309 | None:intergenic |
| GACCCCACGTTGTGGGTCAA+GGG | 0.551673 | 2_1:-15930313 | None:intergenic |
| AGGAGGTTCATGCTGTCCAT+GGG | 0.553571 | 2_1:-15928737 | None:intergenic |
| AAGTACTATAGGAGGACAGT+TGG | 0.558326 | 2_1:+15930619 | Msa0197740:CDS |
| TTCGGTCATATGGGATCGAA+AGG | 0.560164 | 2_1:+15930505 | Msa0197740:CDS |
| CATAGCAGTAAGAACCGCAT+TGG | 0.560429 | 2_1:+15930474 | Msa0197740:CDS |
| CCTCCACCAGCAGAAGGAAG+CGG | 0.560638 | 2_1:+15930238 | Msa0197740:CDS |
| GGACCCGTCTCGATCCGGGT+CGG | 0.561874 | 2_1:+15928940 | Msa0197740:CDS |
| TGAGAAGGGAAACCAGGAGG+AGG | 0.562570 | 2_1:-15928884 | None:intergenic |
| CAAAGAAGAATGACCCGACC+CGG | 0.563112 | 2_1:-15928954 | None:intergenic |
| CTGGATTAAGGCTAGGCTGT+TGG | 0.565938 | 2_1:-15930356 | None:intergenic |
| CTTGACCCACAACGTGGGGT+CGG | 0.569379 | 2_1:+15930315 | Msa0197740:CDS |
| GGCGACCTTATCTTCGCCGC+CGG | 0.577427 | 2_1:+15928794 | Msa0197740:CDS |
| TTACCAGCCAGTAACCAGTA+AGG | 0.581049 | 2_1:+15928668 | None:intergenic |
| TCCTCGACCTTTATGGAAGG+TGG | 0.582785 | 2_1:-15928920 | None:intergenic |
| TTTCTGAATCAGCGATATGA+GGG | 0.586770 | 2_1:-15930191 | None:intergenic |
| AGAACATGCAAAATTTAGGA+TGG | 0.593980 | 2_1:-15930896 | None:intergenic |
| CAGATTCCTCCACCAGCAGA+AGG | 0.594230 | 2_1:+15930232 | Msa0197740:CDS |
| CCCACCCTTGACCCACAACG+TGG | 0.596089 | 2_1:+15930309 | Msa0197740:CDS |
| CCACGTACTGGATTAAGGCT+AGG | 0.596198 | 2_1:-15930363 | None:intergenic |
| CAACATGGTCGGCGGCGAGG+AGG | 0.598694 | 2_1:-15928754 | None:intergenic |
| CACCCTTGACCCACAACGTG+GGG | 0.600798 | 2_1:+15930311 | Msa0197740:CDS |
| AATTCAGCTCAAGAAAGAGA+AGG | 0.601809 | 2_1:+15929957 | Msa0197740:CDS |
| CCACCCTTGACCCACAACGT+GGG | 0.601931 | 2_1:+15930310 | Msa0197740:CDS |
| GGCGGCGAAGATAAGGTCGC+CGG | 0.602029 | 2_1:-15928792 | None:intergenic |
| TGTCCAATTCGTCAAAGTAA+GGG | 0.602664 | 2_1:-15930678 | None:intergenic |
| TGACCCGACCCGGATCGAGA+CGG | 0.603647 | 2_1:-15928944 | None:intergenic |
| TTGAGAGGATGGAAAAGGAA+AGG | 0.604583 | 2_1:+15930077 | Msa0197740:CDS |
| ACCACCTTCCATAAAGGTCG+AGG | 0.606661 | 2_1:+15928919 | Msa0197740:CDS |
| TATAGGAGGACAGTTGGGAG+CGG | 0.607290 | 2_1:+15930625 | Msa0197740:CDS |
| AGCTCATCTTCGGATGACGT+GGG | 0.607626 | 2_1:+15929911 | Msa0197740:intron |
| GGGAAATGGAGCAACATGGT+CGG | 0.622366 | 2_1:-15928765 | None:intergenic |
| ACATCAATAAGTACTATAGG+AGG | 0.623811 | 2_1:+15930611 | Msa0197740:CDS |
| GAGCAACATGGTCGGCGGCG+AGG | 0.624751 | 2_1:-15928757 | None:intergenic |
| CCTAGCCTTAATCCAGTACG+TGG | 0.624810 | 2_1:+15930363 | Msa0197740:CDS |
| GAGATAGCTGGAGCATTGCA+GGG | 0.625252 | 2_1:+15930541 | Msa0197740:CDS |
| GTGGTTGGAGAGGAGGCCGG+CGG | 0.625523 | 2_1:-15928810 | None:intergenic |
| GCAGGACGAAGAAGCTAGAG+CGG | 0.631131 | 2_1:+15930147 | Msa0197740:CDS |
| AATTGGTGGAAATGATTGAG+AGG | 0.633368 | 2_1:+15930062 | Msa0197740:CDS |
| AGAAGAAGCATGGAAGCGCG+AGG | 0.638350 | 2_1:+15930108 | Msa0197740:CDS |
| TCGTTCTGCGAAGAAGTGCA+AGG | 0.647147 | 2_1:+15930576 | Msa0197740:CDS |
| AGGAAGCGGAATAAGAGAAG+AGG | 0.647234 | 2_1:+15930252 | Msa0197740:CDS |
| AAGAAGCTAGAGCGGCTGAG+AGG | 0.648990 | 2_1:+15930155 | Msa0197740:CDS |
| GGGTCCTCGACCTTTATGGA+AGG | 0.655244 | 2_1:-15928923 | None:intergenic |
| AAATGGAGCAACATGGTCGG+CGG | 0.656518 | 2_1:-15928762 | None:intergenic |
| CTTTATGGAAGGTGGTAGAG+GGG | 0.657356 | 2_1:-15928912 | None:intergenic |
| AGTCGGGAAATGGAGCAACA+TGG | 0.658925 | 2_1:-15928769 | None:intergenic |
| AAATTTGGTAAAGAGGATGA+CGG | 0.659081 | 2_1:+15930015 | Msa0197740:CDS |
| ACCGAACTTGTGTTCCAATG+CGG | 0.661234 | 2_1:-15930488 | None:intergenic |
| ATCGAAAGGATCAATATGGG+AGG | 0.667283 | 2_1:+15930519 | Msa0197740:CDS |
| CTAGCCTTAATCCAGTACGT+GGG | 0.678764 | 2_1:+15930364 | Msa0197740:CDS |
| TGGTGAGAAGGGAAACCAGG+AGG | 0.688570 | 2_1:-15928887 | None:intergenic |
| TAGCCTTAATCCAGTACGTG+GGG | 0.690775 | 2_1:+15930365 | Msa0197740:CDS |
| ATAAGGGAAGAAAAGGAGCA+GGG | 0.692895 | 2_1:+15930766 | Msa0197740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTTATCTTTTTTATTT+TGG | + | chr2_1:15929051-15929070 | Msa0197740:intron | 10.0% |
| !!! | AAATTTGATAATCATAAATA+TGG | + | chr2_1:15930791-15930810 | Msa0197740:exon | 10.0% |
| !!! | AGTTTTTATCTTTTTTATTT+TGG | + | chr2_1:15929051-15929070 | Msa0197740:intron | 10.0% |
| !!! | AAATTTGATAATCATAAATA+TGG | + | chr2_1:15930791-15930810 | Msa0197740:exon | 10.0% |
| !!! | AACTATTATCCATTTATTTT+GGG | + | chr2_1:15929819-15929838 | Msa0197740:intron | 15.0% |
| !!! | AACTATTATCCATTTATTTT+GGG | + | chr2_1:15929819-15929838 | Msa0197740:intron | 15.0% |
| !! | AATGGTAAAAATGAAACAAA+CGG | - | chr2_1:15928711-15928730 | None:intergenic | 20.0% |
| !!! | TATTTTGGTTGAAAAATCAA+TGG | + | chr2_1:15929066-15929085 | Msa0197740:intron | 20.0% |
| !! | AAATCAATGGTTAAACAATT+AGG | + | chr2_1:15929079-15929098 | Msa0197740:intron | 20.0% |
| !! | ATCAATATTAAATGGTTTGA+GGG | + | chr2_1:15929472-15929491 | Msa0197740:intron | 20.0% |
| !! | ATATATGCTACATAAAAACT+TGG | - | chr2_1:15929592-15929611 | None:intergenic | 20.0% |
| !! | AGCATATATAATAGTTCATT+AGG | + | chr2_1:15929603-15929622 | Msa0197740:intron | 20.0% |
| !!! | GAACTATTATCCATTTATTT+TGG | + | chr2_1:15929818-15929837 | Msa0197740:intron | 20.0% |
| !!! | ACTATTATCCATTTATTTTG+GGG | + | chr2_1:15929820-15929839 | Msa0197740:intron | 20.0% |
| !! | AAAACATCAATAAGTACTAT+AGG | + | chr2_1:15930608-15930627 | Msa0197740:CDS | 20.0% |
| !!! | TACCAATTTTTTTACTGAAT+TGG | + | chr2_1:15930921-15930940 | Msa0197740:three_prime_UTR | 20.0% |
| !! | AATGGTAAAAATGAAACAAA+CGG | - | chr2_1:15928711-15928730 | None:intergenic | 20.0% |
| !!! | TATTTTGGTTGAAAAATCAA+TGG | + | chr2_1:15929066-15929085 | Msa0197740:intron | 20.0% |
| !! | AAATCAATGGTTAAACAATT+AGG | + | chr2_1:15929079-15929098 | Msa0197740:intron | 20.0% |
| !! | ATCAATATTAAATGGTTTGA+GGG | + | chr2_1:15929472-15929491 | Msa0197740:intron | 20.0% |
| !! | ATATATGCTACATAAAAACT+TGG | - | chr2_1:15929592-15929611 | None:intergenic | 20.0% |
| !! | AGCATATATAATAGTTCATT+AGG | + | chr2_1:15929603-15929622 | Msa0197740:intron | 20.0% |
| !!! | GAACTATTATCCATTTATTT+TGG | + | chr2_1:15929818-15929837 | Msa0197740:intron | 20.0% |
| !!! | ACTATTATCCATTTATTTTG+GGG | + | chr2_1:15929820-15929839 | Msa0197740:intron | 20.0% |
| !! | AAAACATCAATAAGTACTAT+AGG | + | chr2_1:15930608-15930627 | Msa0197740:CDS | 20.0% |
| !!! | TACCAATTTTTTTACTGAAT+TGG | + | chr2_1:15930921-15930940 | Msa0197740:three_prime_UTR | 20.0% |
| ! | GTAAAAACTTTACAAGCTAA+GGG | - | chr2_1:15929017-15929036 | None:intergenic | 25.0% |
| ! | AGTAAAAACTTTACAAGCTA+AGG | - | chr2_1:15929018-15929037 | None:intergenic | 25.0% |
| !!! | TGATGGTAAATGTTGTTTTA+TGG | + | chr2_1:15929323-15929342 | Msa0197740:intron | 25.0% |
| ! | GAAGAAAAAAGAATCATACA+AGG | + | chr2_1:15929358-15929377 | Msa0197740:intron | 25.0% |
| !! | AGGTATTGTATGATTCTTTA+TGG | + | chr2_1:15929378-15929397 | Msa0197740:intron | 25.0% |
| ! | TATGATTCTTTATGGTAGTT+TGG | + | chr2_1:15929386-15929405 | Msa0197740:intron | 25.0% |
| ! | ACTGTTGGATCAATATTAAA+TGG | + | chr2_1:15929464-15929483 | Msa0197740:intron | 25.0% |
| ! | GATCAATATTAAATGGTTTG+AGG | + | chr2_1:15929471-15929490 | Msa0197740:intron | 25.0% |
| !! | ATTCTTCTGCTATTTAGTAA+AGG | + | chr2_1:15929676-15929695 | Msa0197740:intron | 25.0% |
| !! | TTCTTCTGCTATTTAGTAAA+GGG | + | chr2_1:15929677-15929696 | Msa0197740:intron | 25.0% |
| ! | AACATTGGATAAATCTACTT+TGG | + | chr2_1:15929776-15929795 | Msa0197740:intron | 25.0% |
| ! | GATAAATCTACTTTGGATAA+AGG | + | chr2_1:15929783-15929802 | Msa0197740:intron | 25.0% |
| ! | ATGTTTAACCCCAAAATAAA+TGG | - | chr2_1:15929831-15929850 | None:intergenic | 25.0% |
| !!! | TTATTTTGGGGTTAAACATA+AGG | + | chr2_1:15929832-15929851 | Msa0197740:intron | 25.0% |
| ! | ATTCGAATCATTATCGTAAA+AGG | - | chr2_1:15929873-15929892 | None:intergenic | 25.0% |
| ! | AACAAAAAACATTTCAACAG+CGG | + | chr2_1:15930406-15930425 | Msa0197740:CDS | 25.0% |
| !!! | GAGTACTGAAAATTTTACAT+AGG | - | chr2_1:15930817-15930836 | None:intergenic | 25.0% |
| ! | TCTAAAAATGTTGCTCATTA+AGG | - | chr2_1:15930869-15930888 | None:intergenic | 25.0% |
| ! | TACAAGAACATGCAAAATTT+AGG | - | chr2_1:15930903-15930922 | None:intergenic | 25.0% |
| ! | GACCAATTCAGTAAAAAAAT+TGG | - | chr2_1:15930926-15930945 | None:intergenic | 25.0% |
| ! | GTAAAAACTTTACAAGCTAA+GGG | - | chr2_1:15929017-15929036 | None:intergenic | 25.0% |
| ! | AGTAAAAACTTTACAAGCTA+AGG | - | chr2_1:15929018-15929037 | None:intergenic | 25.0% |
| !!! | TGATGGTAAATGTTGTTTTA+TGG | + | chr2_1:15929323-15929342 | Msa0197740:intron | 25.0% |
| ! | GAAGAAAAAAGAATCATACA+AGG | + | chr2_1:15929358-15929377 | Msa0197740:intron | 25.0% |
| !! | AGGTATTGTATGATTCTTTA+TGG | + | chr2_1:15929378-15929397 | Msa0197740:intron | 25.0% |
| ! | TATGATTCTTTATGGTAGTT+TGG | + | chr2_1:15929386-15929405 | Msa0197740:intron | 25.0% |
| ! | ACTGTTGGATCAATATTAAA+TGG | + | chr2_1:15929464-15929483 | Msa0197740:intron | 25.0% |
| ! | GATCAATATTAAATGGTTTG+AGG | + | chr2_1:15929471-15929490 | Msa0197740:intron | 25.0% |
| !! | ATTCTTCTGCTATTTAGTAA+AGG | + | chr2_1:15929676-15929695 | Msa0197740:intron | 25.0% |
| !! | TTCTTCTGCTATTTAGTAAA+GGG | + | chr2_1:15929677-15929696 | Msa0197740:intron | 25.0% |
| ! | AACATTGGATAAATCTACTT+TGG | + | chr2_1:15929776-15929795 | Msa0197740:intron | 25.0% |
| ! | GATAAATCTACTTTGGATAA+AGG | + | chr2_1:15929783-15929802 | Msa0197740:intron | 25.0% |
| ! | ATGTTTAACCCCAAAATAAA+TGG | - | chr2_1:15929831-15929850 | None:intergenic | 25.0% |
| !!! | TTATTTTGGGGTTAAACATA+AGG | + | chr2_1:15929832-15929851 | Msa0197740:intron | 25.0% |
| ! | ATTCGAATCATTATCGTAAA+AGG | - | chr2_1:15929873-15929892 | None:intergenic | 25.0% |
| ! | AACAAAAAACATTTCAACAG+CGG | + | chr2_1:15930406-15930425 | Msa0197740:CDS | 25.0% |
| !!! | GAGTACTGAAAATTTTACAT+AGG | - | chr2_1:15930817-15930836 | None:intergenic | 25.0% |
| ! | TCTAAAAATGTTGCTCATTA+AGG | - | chr2_1:15930869-15930888 | None:intergenic | 25.0% |
| ! | TACAAGAACATGCAAAATTT+AGG | - | chr2_1:15930903-15930922 | None:intergenic | 25.0% |
| ! | GACCAATTCAGTAAAAAAAT+TGG | - | chr2_1:15930926-15930945 | None:intergenic | 25.0% |
| TGTGTTACAAACATGCAAAT+TGG | + | chr2_1:15929285-15929304 | Msa0197740:intron | 30.0% | |
| !!! | TGGTAAATGTTGTTTTATGG+TGG | + | chr2_1:15929326-15929345 | Msa0197740:intron | 30.0% |
| TGTTTGACTAACATAAATGC+CGG | - | chr2_1:15929438-15929457 | None:intergenic | 30.0% | |
| AGTCAAACAATTCAAACTGT+TGG | + | chr2_1:15929449-15929468 | Msa0197740:intron | 30.0% | |
| ! | TAATTTGTAGACTTTCCTGA+TGG | + | chr2_1:15929524-15929543 | Msa0197740:intron | 30.0% |
| !!! | ACTAGCTATGTTTTATTTGC+AGG | + | chr2_1:15929564-15929583 | Msa0197740:intron | 30.0% |
| TGGATAAAGGATATATCGAA+CGG | + | chr2_1:15929796-15929815 | Msa0197740:intron | 30.0% | |
| AAATTTGGTAAAGAGGATGA+CGG | + | chr2_1:15930015-15930034 | Msa0197740:CDS | 30.0% | |
| ACATCAATAAGTACTATAGG+AGG | + | chr2_1:15930611-15930630 | Msa0197740:CDS | 30.0% | |
| TTGGACAATCTGTATAGAAA+TGG | + | chr2_1:15930694-15930713 | Msa0197740:CDS | 30.0% | |
| TGGACAATCTGTATAGAAAT+GGG | + | chr2_1:15930695-15930714 | Msa0197740:CDS | 30.0% | |
| ATACCAACAATGTTTCCATA+AGG | + | chr2_1:15930749-15930768 | Msa0197740:CDS | 30.0% | |
| TACCAACAATGTTTCCATAA+GGG | + | chr2_1:15930750-15930769 | Msa0197740:CDS | 30.0% | |
| AGAACATGCAAAATTTAGGA+TGG | - | chr2_1:15930899-15930918 | None:intergenic | 30.0% | |
| TGTGTTACAAACATGCAAAT+TGG | + | chr2_1:15929285-15929304 | Msa0197740:intron | 30.0% | |
| !!! | TGGTAAATGTTGTTTTATGG+TGG | + | chr2_1:15929326-15929345 | Msa0197740:intron | 30.0% |
| TGTTTGACTAACATAAATGC+CGG | - | chr2_1:15929438-15929457 | None:intergenic | 30.0% | |
| AGTCAAACAATTCAAACTGT+TGG | + | chr2_1:15929449-15929468 | Msa0197740:intron | 30.0% | |
| ! | TAATTTGTAGACTTTCCTGA+TGG | + | chr2_1:15929524-15929543 | Msa0197740:intron | 30.0% |
| !!! | ACTAGCTATGTTTTATTTGC+AGG | + | chr2_1:15929564-15929583 | Msa0197740:intron | 30.0% |
| TGGATAAAGGATATATCGAA+CGG | + | chr2_1:15929796-15929815 | Msa0197740:intron | 30.0% | |
| AAATTTGGTAAAGAGGATGA+CGG | + | chr2_1:15930015-15930034 | Msa0197740:CDS | 30.0% | |
| ACATCAATAAGTACTATAGG+AGG | + | chr2_1:15930611-15930630 | Msa0197740:CDS | 30.0% | |
| TTGGACAATCTGTATAGAAA+TGG | + | chr2_1:15930694-15930713 | Msa0197740:CDS | 30.0% | |
| TGGACAATCTGTATAGAAAT+GGG | + | chr2_1:15930695-15930714 | Msa0197740:CDS | 30.0% | |
| ATACCAACAATGTTTCCATA+AGG | + | chr2_1:15930749-15930768 | Msa0197740:CDS | 30.0% | |
| TACCAACAATGTTTCCATAA+GGG | + | chr2_1:15930750-15930769 | Msa0197740:CDS | 30.0% | |
| AGAACATGCAAAATTTAGGA+TGG | - | chr2_1:15930899-15930918 | None:intergenic | 30.0% | |
| GGTAAAAATGAAACAAACGG+CGG | - | chr2_1:15928708-15928727 | None:intergenic | 35.0% | |
| GATAAAAGAAGAACTTACCC+GGG | - | chr2_1:15928995-15929014 | None:intergenic | 35.0% | |
| GGATAAAAGAAGAACTTACC+CGG | - | chr2_1:15928996-15929015 | None:intergenic | 35.0% | |
| GTATCTTGATGAGATAAGAG+TGG | + | chr2_1:15929239-15929258 | Msa0197740:intron | 35.0% | |
| GGTTACAGTACTTTGTATGA+TGG | + | chr2_1:15929306-15929325 | Msa0197740:intron | 35.0% | |
| ! | ATTTGCATTTTCGATCGTTG+TGG | + | chr2_1:15929409-15929428 | Msa0197740:intron | 35.0% |
| ! | CTATGTGCTATTGACAACAT+TGG | + | chr2_1:15929761-15929780 | Msa0197740:intron | 35.0% |
| GGGTTAAACATAAGGTTTGA+TGG | + | chr2_1:15929840-15929859 | Msa0197740:intron | 35.0% | |
| TCATCATTTCAGCTCATCTT+CGG | + | chr2_1:15929901-15929920 | Msa0197740:intron | 35.0% | |
| AATTCAGCTCAAGAAAGAGA+AGG | + | chr2_1:15929957-15929976 | Msa0197740:CDS | 35.0% | |
| ! | GGAAGATTTTGCAGCAAATT+TGG | + | chr2_1:15930000-15930019 | Msa0197740:CDS | 35.0% |
| TTGCAGCAAATTTGGTAAAG+AGG | + | chr2_1:15930008-15930027 | Msa0197740:CDS | 35.0% | |
| AGAGCAGATGCATAAAGAAT+TGG | + | chr2_1:15930045-15930064 | Msa0197740:CDS | 35.0% | |
| AATTGGTGGAAATGATTGAG+AGG | + | chr2_1:15930062-15930081 | Msa0197740:CDS | 35.0% | |
| AATGATTGAGAGGATGGAAA+AGG | + | chr2_1:15930072-15930091 | Msa0197740:CDS | 35.0% | |
| TTTCTGAATCAGCGATATGA+GGG | - | chr2_1:15930194-15930213 | None:intergenic | 35.0% | |
| !! | ATCGCTGATTCAGAAACTAT+TGG | + | chr2_1:15930198-15930217 | Msa0197740:CDS | 35.0% |
| !! | TCGCTGATTCAGAAACTATT+GGG | + | chr2_1:15930199-15930218 | Msa0197740:CDS | 35.0% |
| TGTCCAATTCGTCAAAGTAA+GGG | - | chr2_1:15930681-15930700 | None:intergenic | 35.0% | |
| TTGTCCAATTCGTCAAAGTA+AGG | - | chr2_1:15930682-15930701 | None:intergenic | 35.0% | |
| TTCCCTTATGGAAACATTGT+TGG | - | chr2_1:15930755-15930774 | None:intergenic | 35.0% | |
| TGTTTCCATAAGGGAAGAAA+AGG | + | chr2_1:15930759-15930778 | Msa0197740:CDS | 35.0% | |
| GGTAAAAATGAAACAAACGG+CGG | - | chr2_1:15928708-15928727 | None:intergenic | 35.0% | |
| GATAAAAGAAGAACTTACCC+GGG | - | chr2_1:15928995-15929014 | None:intergenic | 35.0% | |
| GGATAAAAGAAGAACTTACC+CGG | - | chr2_1:15928996-15929015 | None:intergenic | 35.0% | |
| GTATCTTGATGAGATAAGAG+TGG | + | chr2_1:15929239-15929258 | Msa0197740:intron | 35.0% | |
| GGTTACAGTACTTTGTATGA+TGG | + | chr2_1:15929306-15929325 | Msa0197740:intron | 35.0% | |
| ! | ATTTGCATTTTCGATCGTTG+TGG | + | chr2_1:15929409-15929428 | Msa0197740:intron | 35.0% |
| ! | CTATGTGCTATTGACAACAT+TGG | + | chr2_1:15929761-15929780 | Msa0197740:intron | 35.0% |
| GGGTTAAACATAAGGTTTGA+TGG | + | chr2_1:15929840-15929859 | Msa0197740:intron | 35.0% | |
| TCATCATTTCAGCTCATCTT+CGG | + | chr2_1:15929901-15929920 | Msa0197740:intron | 35.0% | |
| AATTCAGCTCAAGAAAGAGA+AGG | + | chr2_1:15929957-15929976 | Msa0197740:CDS | 35.0% | |
| ! | GGAAGATTTTGCAGCAAATT+TGG | + | chr2_1:15930000-15930019 | Msa0197740:CDS | 35.0% |
| TTGCAGCAAATTTGGTAAAG+AGG | + | chr2_1:15930008-15930027 | Msa0197740:CDS | 35.0% | |
| AGAGCAGATGCATAAAGAAT+TGG | + | chr2_1:15930045-15930064 | Msa0197740:CDS | 35.0% | |
| AATTGGTGGAAATGATTGAG+AGG | + | chr2_1:15930062-15930081 | Msa0197740:CDS | 35.0% | |
| AATGATTGAGAGGATGGAAA+AGG | + | chr2_1:15930072-15930091 | Msa0197740:CDS | 35.0% | |
| TTTCTGAATCAGCGATATGA+GGG | - | chr2_1:15930194-15930213 | None:intergenic | 35.0% | |
| !! | ATCGCTGATTCAGAAACTAT+TGG | + | chr2_1:15930198-15930217 | Msa0197740:CDS | 35.0% |
| !! | TCGCTGATTCAGAAACTATT+GGG | + | chr2_1:15930199-15930218 | Msa0197740:CDS | 35.0% |
| TGTCCAATTCGTCAAAGTAA+GGG | - | chr2_1:15930681-15930700 | None:intergenic | 35.0% | |
| TTGTCCAATTCGTCAAAGTA+AGG | - | chr2_1:15930682-15930701 | None:intergenic | 35.0% | |
| TTCCCTTATGGAAACATTGT+TGG | - | chr2_1:15930755-15930774 | None:intergenic | 35.0% | |
| TGTTTCCATAAGGGAAGAAA+AGG | + | chr2_1:15930759-15930778 | Msa0197740:CDS | 35.0% | |
| ! | TTTTACCATTACCACACCCA+TGG | + | chr2_1:15928721-15928740 | Msa0197740:exon | 40.0% |
| ! | TTACCCGGGTTTTTGACAAA+GGG | - | chr2_1:15928981-15929000 | None:intergenic | 40.0% |
| ! | TTTTCGATCGTTGTGGAATC+CGG | + | chr2_1:15929416-15929435 | Msa0197740:intron | 40.0% |
| TTTGTAGACTTTCCTGATGG+CGG | + | chr2_1:15929527-15929546 | Msa0197740:intron | 40.0% | |
| GTCAAATAGTCGCTATTGCA+TGG | + | chr2_1:15929702-15929721 | Msa0197740:intron | 40.0% | |
| GCAGATGCATAAAGAATTGG+TGG | + | chr2_1:15930048-15930067 | Msa0197740:CDS | 40.0% | |
| TTGAGAGGATGGAAAAGGAA+AGG | + | chr2_1:15930077-15930096 | Msa0197740:CDS | 40.0% | |
| GGATAAAGAGAGAAGAAGCA+TGG | + | chr2_1:15930098-15930117 | Msa0197740:CDS | 40.0% | |
| GTTTCTGAATCAGCGATATG+AGG | - | chr2_1:15930195-15930214 | None:intergenic | 40.0% | |
| AAGAGAAGAGGATGAAGTTG+AGG | + | chr2_1:15930264-15930283 | Msa0197740:CDS | 40.0% | |
| GAACACAAGTTCGGTCATAT+GGG | + | chr2_1:15930496-15930515 | Msa0197740:CDS | 40.0% | |
| TGGGATCGAAAGGATCAATA+TGG | + | chr2_1:15930515-15930534 | Msa0197740:CDS | 40.0% | |
| GGGATCGAAAGGATCAATAT+GGG | + | chr2_1:15930516-15930535 | Msa0197740:CDS | 40.0% | |
| ATCGAAAGGATCAATATGGG+AGG | + | chr2_1:15930519-15930538 | Msa0197740:CDS | 40.0% | |
| ! | GAAGAAGTGCAAGGAGAAAT+GGG | + | chr2_1:15930585-15930604 | Msa0197740:CDS | 40.0% |
| AAGTACTATAGGAGGACAGT+TGG | + | chr2_1:15930619-15930638 | Msa0197740:CDS | 40.0% | |
| AGTACTATAGGAGGACAGTT+GGG | + | chr2_1:15930620-15930639 | Msa0197740:CDS | 40.0% | |
| !!! | GGGCAAGTTTTGCTATTAAC+AGG | - | chr2_1:15930661-15930680 | None:intergenic | 40.0% |
| TTGCCCTTACTTTGACGAAT+TGG | + | chr2_1:15930675-15930694 | Msa0197740:CDS | 40.0% | |
| TCTGTATAGAAATGGGTCCT+TGG | + | chr2_1:15930702-15930721 | Msa0197740:CDS | 40.0% | |
| TGCATTTCCATTTCTCTCCA+AGG | - | chr2_1:15930722-15930741 | None:intergenic | 40.0% | |
| ATAAGGGAAGAAAAGGAGCA+GGG | + | chr2_1:15930766-15930785 | Msa0197740:CDS | 40.0% | |
| ! | TTTTACCATTACCACACCCA+TGG | + | chr2_1:15928721-15928740 | Msa0197740:exon | 40.0% |
| ! | TTACCCGGGTTTTTGACAAA+GGG | - | chr2_1:15928981-15929000 | None:intergenic | 40.0% |
| ! | TTTTCGATCGTTGTGGAATC+CGG | + | chr2_1:15929416-15929435 | Msa0197740:intron | 40.0% |
| TTTGTAGACTTTCCTGATGG+CGG | + | chr2_1:15929527-15929546 | Msa0197740:intron | 40.0% | |
| GTCAAATAGTCGCTATTGCA+TGG | + | chr2_1:15929702-15929721 | Msa0197740:intron | 40.0% | |
| GCAGATGCATAAAGAATTGG+TGG | + | chr2_1:15930048-15930067 | Msa0197740:CDS | 40.0% | |
| TTGAGAGGATGGAAAAGGAA+AGG | + | chr2_1:15930077-15930096 | Msa0197740:CDS | 40.0% | |
| GGATAAAGAGAGAAGAAGCA+TGG | + | chr2_1:15930098-15930117 | Msa0197740:CDS | 40.0% | |
| GTTTCTGAATCAGCGATATG+AGG | - | chr2_1:15930195-15930214 | None:intergenic | 40.0% | |
| AAGAGAAGAGGATGAAGTTG+AGG | + | chr2_1:15930264-15930283 | Msa0197740:CDS | 40.0% | |
| GAACACAAGTTCGGTCATAT+GGG | + | chr2_1:15930496-15930515 | Msa0197740:CDS | 40.0% | |
| TGGGATCGAAAGGATCAATA+TGG | + | chr2_1:15930515-15930534 | Msa0197740:CDS | 40.0% | |
| GGGATCGAAAGGATCAATAT+GGG | + | chr2_1:15930516-15930535 | Msa0197740:CDS | 40.0% | |
| ATCGAAAGGATCAATATGGG+AGG | + | chr2_1:15930519-15930538 | Msa0197740:CDS | 40.0% | |
| ! | GAAGAAGTGCAAGGAGAAAT+GGG | + | chr2_1:15930585-15930604 | Msa0197740:CDS | 40.0% |
| AAGTACTATAGGAGGACAGT+TGG | + | chr2_1:15930619-15930638 | Msa0197740:CDS | 40.0% | |
| AGTACTATAGGAGGACAGTT+GGG | + | chr2_1:15930620-15930639 | Msa0197740:CDS | 40.0% | |
| !!! | GGGCAAGTTTTGCTATTAAC+AGG | - | chr2_1:15930661-15930680 | None:intergenic | 40.0% |
| TTGCCCTTACTTTGACGAAT+TGG | + | chr2_1:15930675-15930694 | Msa0197740:CDS | 40.0% | |
| TCTGTATAGAAATGGGTCCT+TGG | + | chr2_1:15930702-15930721 | Msa0197740:CDS | 40.0% | |
| TGCATTTCCATTTCTCTCCA+AGG | - | chr2_1:15930722-15930741 | None:intergenic | 40.0% | |
| ATAAGGGAAGAAAAGGAGCA+GGG | + | chr2_1:15930766-15930785 | Msa0197740:CDS | 40.0% | |
| ! | GTTACTGCCTTACTGGTTAC+TGG | - | chr2_1:15928678-15928697 | None:intergenic | 45.0% |
| !! | TTTTTGGGGATTGTGGTGGT+TGG | - | chr2_1:15928828-15928847 | None:intergenic | 45.0% |
| !! | TGAGTTTTTGGGGATTGTGG+TGG | - | chr2_1:15928832-15928851 | None:intergenic | 45.0% |
| !! | GGATGAGTTTTTGGGGATTG+TGG | - | chr2_1:15928835-15928854 | None:intergenic | 45.0% |
| ! | CTGATGGGGATGAGTTTTTG+GGG | - | chr2_1:15928842-15928861 | None:intergenic | 45.0% |
| ! | CCTGATGGGGATGAGTTTTT+GGG | - | chr2_1:15928843-15928862 | None:intergenic | 45.0% |
| ! | ACCTGATGGGGATGAGTTTT+TGG | - | chr2_1:15928844-15928863 | None:intergenic | 45.0% |
| CTTTATGGAAGGTGGTAGAG+GGG | - | chr2_1:15928915-15928934 | None:intergenic | 45.0% | |
| CCTTTATGGAAGGTGGTAGA+GGG | - | chr2_1:15928916-15928935 | None:intergenic | 45.0% | |
| ACCTTTATGGAAGGTGGTAG+AGG | - | chr2_1:15928917-15928936 | None:intergenic | 45.0% | |
| TTGCCCCTTTGTCAAAAACC+CGG | + | chr2_1:15928974-15928993 | Msa0197740:CDS | 45.0% | |
| ! | TACCCGGGTTTTTGACAAAG+GGG | - | chr2_1:15928980-15928999 | None:intergenic | 45.0% |
| ! | CTTACCCGGGTTTTTGACAA+AGG | - | chr2_1:15928982-15929001 | None:intergenic | 45.0% |
| TTGTAGACTTTCCTGATGGC+GGG | + | chr2_1:15929528-15929547 | Msa0197740:intron | 45.0% | |
| GAGAAAGAGTTCGAGAAAGC+TGG | + | chr2_1:15929979-15929998 | Msa0197740:CDS | 45.0% | |
| GGTGGAAATGATTGAGAGGA+TGG | + | chr2_1:15930066-15930085 | Msa0197740:CDS | 45.0% | |
| GGAGATGGAGAGAATTAAGC+AGG | + | chr2_1:15930129-15930148 | Msa0197740:CDS | 45.0% | |
| AGGAAGCGGAATAAGAGAAG+AGG | + | chr2_1:15930252-15930271 | Msa0197740:CDS | 45.0% | |
| !! | CTAGCCTTAATCCAGTACGT+GGG | + | chr2_1:15930364-15930383 | Msa0197740:CDS | 45.0% |
| ! | TAGCCTTAATCCAGTACGTG+GGG | + | chr2_1:15930365-15930384 | Msa0197740:CDS | 45.0% |
| ! | TTGTTATTGCTCACCTCAGC+CGG | - | chr2_1:15930391-15930410 | None:intergenic | 45.0% |
| GCGATCCAAGTAACAGTAGA+TGG | + | chr2_1:15930428-15930447 | Msa0197740:CDS | 45.0% | |
| TCTGGCCATCTACTGTTACT+TGG | - | chr2_1:15930436-15930455 | None:intergenic | 45.0% | |
| AGCGCTTGTACTTCAACATC+TGG | - | chr2_1:15930454-15930473 | None:intergenic | 45.0% | |
| CATAGCAGTAAGAACCGCAT+TGG | + | chr2_1:15930474-15930493 | Msa0197740:CDS | 45.0% | |
| ACCGCATTGGAACACAAGTT+CGG | + | chr2_1:15930487-15930506 | Msa0197740:CDS | 45.0% | |
| ACCGAACTTGTGTTCCAATG+CGG | - | chr2_1:15930491-15930510 | None:intergenic | 45.0% | |
| GGAACACAAGTTCGGTCATA+TGG | + | chr2_1:15930495-15930514 | Msa0197740:CDS | 45.0% | |
| TTCGGTCATATGGGATCGAA+AGG | + | chr2_1:15930505-15930524 | Msa0197740:CDS | 45.0% | |
| TCAATATGGGAGGAGATAGC+TGG | + | chr2_1:15930529-15930548 | Msa0197740:CDS | 45.0% | |
| ! | CGAAGAAGTGCAAGGAGAAA+TGG | + | chr2_1:15930584-15930603 | Msa0197740:CDS | 45.0% |
| AATGGGTCCTTGGAGAGAAA+TGG | + | chr2_1:15930712-15930731 | Msa0197740:CDS | 45.0% | |
| ! | CTGCTCCTTTTCTTCCCTTA+TGG | - | chr2_1:15930767-15930786 | None:intergenic | 45.0% |
| CATAAGGGAAGAAAAGGAGC+AGG | + | chr2_1:15930765-15930784 | Msa0197740:CDS | 45.0% | |
| ! | GTTACTGCCTTACTGGTTAC+TGG | - | chr2_1:15928678-15928697 | None:intergenic | 45.0% |
| !! | TTTTTGGGGATTGTGGTGGT+TGG | - | chr2_1:15928828-15928847 | None:intergenic | 45.0% |
| !! | TGAGTTTTTGGGGATTGTGG+TGG | - | chr2_1:15928832-15928851 | None:intergenic | 45.0% |
| !! | GGATGAGTTTTTGGGGATTG+TGG | - | chr2_1:15928835-15928854 | None:intergenic | 45.0% |
| ! | CTGATGGGGATGAGTTTTTG+GGG | - | chr2_1:15928842-15928861 | None:intergenic | 45.0% |
| ! | CCTGATGGGGATGAGTTTTT+GGG | - | chr2_1:15928843-15928862 | None:intergenic | 45.0% |
| ! | ACCTGATGGGGATGAGTTTT+TGG | - | chr2_1:15928844-15928863 | None:intergenic | 45.0% |
| CTTTATGGAAGGTGGTAGAG+GGG | - | chr2_1:15928915-15928934 | None:intergenic | 45.0% | |
| CCTTTATGGAAGGTGGTAGA+GGG | - | chr2_1:15928916-15928935 | None:intergenic | 45.0% | |
| ACCTTTATGGAAGGTGGTAG+AGG | - | chr2_1:15928917-15928936 | None:intergenic | 45.0% | |
| TTGCCCCTTTGTCAAAAACC+CGG | + | chr2_1:15928974-15928993 | Msa0197740:CDS | 45.0% | |
| ! | TACCCGGGTTTTTGACAAAG+GGG | - | chr2_1:15928980-15928999 | None:intergenic | 45.0% |
| ! | CTTACCCGGGTTTTTGACAA+AGG | - | chr2_1:15928982-15929001 | None:intergenic | 45.0% |
| TTGTAGACTTTCCTGATGGC+GGG | + | chr2_1:15929528-15929547 | Msa0197740:intron | 45.0% | |
| GAGAAAGAGTTCGAGAAAGC+TGG | + | chr2_1:15929979-15929998 | Msa0197740:CDS | 45.0% | |
| GGTGGAAATGATTGAGAGGA+TGG | + | chr2_1:15930066-15930085 | Msa0197740:CDS | 45.0% | |
| GGAGATGGAGAGAATTAAGC+AGG | + | chr2_1:15930129-15930148 | Msa0197740:CDS | 45.0% | |
| AGGAAGCGGAATAAGAGAAG+AGG | + | chr2_1:15930252-15930271 | Msa0197740:CDS | 45.0% | |
| !! | CTAGCCTTAATCCAGTACGT+GGG | + | chr2_1:15930364-15930383 | Msa0197740:CDS | 45.0% |
| ! | TAGCCTTAATCCAGTACGTG+GGG | + | chr2_1:15930365-15930384 | Msa0197740:CDS | 45.0% |
| ! | TTGTTATTGCTCACCTCAGC+CGG | - | chr2_1:15930391-15930410 | None:intergenic | 45.0% |
| GCGATCCAAGTAACAGTAGA+TGG | + | chr2_1:15930428-15930447 | Msa0197740:CDS | 45.0% | |
| TCTGGCCATCTACTGTTACT+TGG | - | chr2_1:15930436-15930455 | None:intergenic | 45.0% | |
| AGCGCTTGTACTTCAACATC+TGG | - | chr2_1:15930454-15930473 | None:intergenic | 45.0% | |
| CATAGCAGTAAGAACCGCAT+TGG | + | chr2_1:15930474-15930493 | Msa0197740:CDS | 45.0% | |
| ACCGCATTGGAACACAAGTT+CGG | + | chr2_1:15930487-15930506 | Msa0197740:CDS | 45.0% | |
| ACCGAACTTGTGTTCCAATG+CGG | - | chr2_1:15930491-15930510 | None:intergenic | 45.0% | |
| GGAACACAAGTTCGGTCATA+TGG | + | chr2_1:15930495-15930514 | Msa0197740:CDS | 45.0% | |
| TTCGGTCATATGGGATCGAA+AGG | + | chr2_1:15930505-15930524 | Msa0197740:CDS | 45.0% | |
| TCAATATGGGAGGAGATAGC+TGG | + | chr2_1:15930529-15930548 | Msa0197740:CDS | 45.0% | |
| ! | CGAAGAAGTGCAAGGAGAAA+TGG | + | chr2_1:15930584-15930603 | Msa0197740:CDS | 45.0% |
| AATGGGTCCTTGGAGAGAAA+TGG | + | chr2_1:15930712-15930731 | Msa0197740:CDS | 45.0% | |
| ! | CTGCTCCTTTTCTTCCCTTA+TGG | - | chr2_1:15930767-15930786 | None:intergenic | 45.0% |
| CATAAGGGAAGAAAAGGAGC+AGG | + | chr2_1:15930765-15930784 | Msa0197740:CDS | 45.0% | |
| AGGAGGTTCATGCTGTCCAT+GGG | - | chr2_1:15928740-15928759 | None:intergenic | 50.0% | |
| AAATGGAGCAACATGGTCGG+CGG | - | chr2_1:15928765-15928784 | None:intergenic | 50.0% | |
| GGGAAATGGAGCAACATGGT+CGG | - | chr2_1:15928768-15928787 | None:intergenic | 50.0% | |
| AGTCGGGAAATGGAGCAACA+TGG | - | chr2_1:15928772-15928791 | None:intergenic | 50.0% | |
| CCCAAAAACTCATCCCCATC+AGG | + | chr2_1:15928840-15928859 | Msa0197740:CDS | 50.0% | |
| CCCTCTACCACCTTCCATAA+AGG | + | chr2_1:15928913-15928932 | Msa0197740:CDS | 50.0% | |
| ACCACCTTCCATAAAGGTCG+AGG | + | chr2_1:15928919-15928938 | Msa0197740:CDS | 50.0% | |
| TCCTCGACCTTTATGGAAGG+TGG | - | chr2_1:15928923-15928942 | None:intergenic | 50.0% | |
| CAAAGAAGAATGACCCGACC+CGG | - | chr2_1:15928957-15928976 | None:intergenic | 50.0% | |
| TGCCCCTTTGTCAAAAACCC+GGG | + | chr2_1:15928975-15928994 | Msa0197740:CDS | 50.0% | |
| ! | TGTAGACTTTCCTGATGGCG+GGG | + | chr2_1:15929529-15929548 | Msa0197740:intron | 50.0% |
| ACGCTGCTATTCGACAACAC+TGG | - | chr2_1:15929637-15929656 | None:intergenic | 50.0% | |
| AGCTCATCTTCGGATGACGT+GGG | + | chr2_1:15929911-15929930 | Msa0197740:intron | 50.0% | |
| CTTATTCCGCTTCCTTCTGC+TGG | - | chr2_1:15930247-15930266 | None:intergenic | 50.0% | |
| CTGGATTAAGGCTAGGCTGT+TGG | - | chr2_1:15930359-15930378 | None:intergenic | 50.0% | |
| CCACGTACTGGATTAAGGCT+AGG | - | chr2_1:15930366-15930385 | None:intergenic | 50.0% | |
| !! | CCTAGCCTTAATCCAGTACG+TGG | + | chr2_1:15930363-15930382 | Msa0197740:CDS | 50.0% |
| !! | GAGATAGCTGGAGCATTGCA+GGG | + | chr2_1:15930541-15930560 | Msa0197740:CDS | 50.0% |
| ! | TCGTTCTGCGAAGAAGTGCA+AGG | + | chr2_1:15930576-15930595 | Msa0197740:CDS | 50.0% |
| TATAGGAGGACAGTTGGGAG+CGG | + | chr2_1:15930625-15930644 | Msa0197740:CDS | 50.0% | |
| AGGAGGTTCATGCTGTCCAT+GGG | - | chr2_1:15928740-15928759 | None:intergenic | 50.0% | |
| AAATGGAGCAACATGGTCGG+CGG | - | chr2_1:15928765-15928784 | None:intergenic | 50.0% | |
| GGGAAATGGAGCAACATGGT+CGG | - | chr2_1:15928768-15928787 | None:intergenic | 50.0% | |
| AGTCGGGAAATGGAGCAACA+TGG | - | chr2_1:15928772-15928791 | None:intergenic | 50.0% | |
| CCCAAAAACTCATCCCCATC+AGG | + | chr2_1:15928840-15928859 | Msa0197740:CDS | 50.0% | |
| CCCTCTACCACCTTCCATAA+AGG | + | chr2_1:15928913-15928932 | Msa0197740:CDS | 50.0% | |
| ACCACCTTCCATAAAGGTCG+AGG | + | chr2_1:15928919-15928938 | Msa0197740:CDS | 50.0% | |
| TCCTCGACCTTTATGGAAGG+TGG | - | chr2_1:15928923-15928942 | None:intergenic | 50.0% | |
| CAAAGAAGAATGACCCGACC+CGG | - | chr2_1:15928957-15928976 | None:intergenic | 50.0% | |
| TGCCCCTTTGTCAAAAACCC+GGG | + | chr2_1:15928975-15928994 | Msa0197740:CDS | 50.0% | |
| ! | TGTAGACTTTCCTGATGGCG+GGG | + | chr2_1:15929529-15929548 | Msa0197740:intron | 50.0% |
| ACGCTGCTATTCGACAACAC+TGG | - | chr2_1:15929637-15929656 | None:intergenic | 50.0% | |
| AGCTCATCTTCGGATGACGT+GGG | + | chr2_1:15929911-15929930 | Msa0197740:intron | 50.0% | |
| CTTATTCCGCTTCCTTCTGC+TGG | - | chr2_1:15930247-15930266 | None:intergenic | 50.0% | |
| CTGGATTAAGGCTAGGCTGT+TGG | - | chr2_1:15930359-15930378 | None:intergenic | 50.0% | |
| CCACGTACTGGATTAAGGCT+AGG | - | chr2_1:15930366-15930385 | None:intergenic | 50.0% | |
| !! | CCTAGCCTTAATCCAGTACG+TGG | + | chr2_1:15930363-15930382 | Msa0197740:CDS | 50.0% |
| !! | GAGATAGCTGGAGCATTGCA+GGG | + | chr2_1:15930541-15930560 | Msa0197740:CDS | 50.0% |
| ! | TCGTTCTGCGAAGAAGTGCA+AGG | + | chr2_1:15930576-15930595 | Msa0197740:CDS | 50.0% |
| TATAGGAGGACAGTTGGGAG+CGG | + | chr2_1:15930625-15930644 | Msa0197740:CDS | 50.0% | |
| CGTGAGGGTTACTGCCTTAC+TGG | - | chr2_1:15928685-15928704 | None:intergenic | 55.0% | |
| TGAAACAAACGGCGGCGTGA+GGG | - | chr2_1:15928700-15928719 | None:intergenic | 55.0% | |
| ATGAAACAAACGGCGGCGTG+AGG | - | chr2_1:15928701-15928720 | None:intergenic | 55.0% | |
| GCTGTCCATGGGTGTGGTAA+TGG | - | chr2_1:15928729-15928748 | None:intergenic | 55.0% | |
| GTTCATGCTGTCCATGGGTG+TGG | - | chr2_1:15928735-15928754 | None:intergenic | 55.0% | |
| GAGGAGGTTCATGCTGTCCA+TGG | - | chr2_1:15928741-15928760 | None:intergenic | 55.0% | |
| GTTGCTCCATTTCCCGACTC+CGG | + | chr2_1:15928773-15928792 | Msa0197740:CDS | 55.0% | |
| AAGATAAGGTCGCCGGAGTC+GGG | - | chr2_1:15928788-15928807 | None:intergenic | 55.0% | |
| GAAGATAAGGTCGCCGGAGT+CGG | - | chr2_1:15928789-15928808 | None:intergenic | 55.0% | |
| GATTGTGGTGGTTGGAGAGG+AGG | - | chr2_1:15928820-15928839 | None:intergenic | 55.0% | |
| TGAGAAGGGAAACCAGGAGG+AGG | - | chr2_1:15928887-15928906 | None:intergenic | 55.0% | |
| TGGTGAGAAGGGAAACCAGG+AGG | - | chr2_1:15928890-15928909 | None:intergenic | 55.0% | |
| GTGTGGTGAGAAGGGAAACC+AGG | - | chr2_1:15928893-15928912 | None:intergenic | 55.0% | |
| ! | GTAGAGGGGTGTGGTGAGAA+GGG | - | chr2_1:15928901-15928920 | None:intergenic | 55.0% |
| GGGTCCTCGACCTTTATGGA+AGG | - | chr2_1:15928926-15928945 | None:intergenic | 55.0% | |
| AGACGGGTCCTCGACCTTTA+TGG | - | chr2_1:15928930-15928949 | None:intergenic | 55.0% | |
| !! | GTAGACTTTCCTGATGGCGG+GGG | + | chr2_1:15929530-15929549 | Msa0197740:intron | 55.0% |
| CAGCTCATCTTCGGATGACG+TGG | + | chr2_1:15929910-15929929 | Msa0197740:intron | 55.0% | |
| ! | AGAAGAAGCATGGAAGCGCG+AGG | + | chr2_1:15930108-15930127 | Msa0197740:CDS | 55.0% |
| GCAGGACGAAGAAGCTAGAG+CGG | + | chr2_1:15930147-15930166 | Msa0197740:CDS | 55.0% | |
| AAGAAGCTAGAGCGGCTGAG+AGG | + | chr2_1:15930155-15930174 | Msa0197740:CDS | 55.0% | |
| CAGATTCCTCCACCAGCAGA+AGG | + | chr2_1:15930232-15930251 | Msa0197740:CDS | 55.0% | |
| ATTCCGCTTCCTTCTGCTGG+TGG | - | chr2_1:15930244-15930263 | None:intergenic | 55.0% | |
| CTTAATCCAGTACGTGGGGC+CGG | + | chr2_1:15930369-15930388 | Msa0197740:CDS | 55.0% | |
| !! | GGAGATAGCTGGAGCATTGC+AGG | + | chr2_1:15930540-15930559 | Msa0197740:CDS | 55.0% |
| CAGTTGGGAGCGGCAAGAAA+CGG | + | chr2_1:15930635-15930654 | Msa0197740:CDS | 55.0% | |
| CGTGAGGGTTACTGCCTTAC+TGG | - | chr2_1:15928685-15928704 | None:intergenic | 55.0% | |
| TGAAACAAACGGCGGCGTGA+GGG | - | chr2_1:15928700-15928719 | None:intergenic | 55.0% | |
| ATGAAACAAACGGCGGCGTG+AGG | - | chr2_1:15928701-15928720 | None:intergenic | 55.0% | |
| GCTGTCCATGGGTGTGGTAA+TGG | - | chr2_1:15928729-15928748 | None:intergenic | 55.0% | |
| GTTCATGCTGTCCATGGGTG+TGG | - | chr2_1:15928735-15928754 | None:intergenic | 55.0% | |
| GAGGAGGTTCATGCTGTCCA+TGG | - | chr2_1:15928741-15928760 | None:intergenic | 55.0% | |
| GTTGCTCCATTTCCCGACTC+CGG | + | chr2_1:15928773-15928792 | Msa0197740:CDS | 55.0% | |
| AAGATAAGGTCGCCGGAGTC+GGG | - | chr2_1:15928788-15928807 | None:intergenic | 55.0% | |
| GAAGATAAGGTCGCCGGAGT+CGG | - | chr2_1:15928789-15928808 | None:intergenic | 55.0% | |
| GATTGTGGTGGTTGGAGAGG+AGG | - | chr2_1:15928820-15928839 | None:intergenic | 55.0% | |
| TGAGAAGGGAAACCAGGAGG+AGG | - | chr2_1:15928887-15928906 | None:intergenic | 55.0% | |
| TGGTGAGAAGGGAAACCAGG+AGG | - | chr2_1:15928890-15928909 | None:intergenic | 55.0% | |
| GTGTGGTGAGAAGGGAAACC+AGG | - | chr2_1:15928893-15928912 | None:intergenic | 55.0% | |
| ! | GTAGAGGGGTGTGGTGAGAA+GGG | - | chr2_1:15928901-15928920 | None:intergenic | 55.0% |
| GGGTCCTCGACCTTTATGGA+AGG | - | chr2_1:15928926-15928945 | None:intergenic | 55.0% | |
| AGACGGGTCCTCGACCTTTA+TGG | - | chr2_1:15928930-15928949 | None:intergenic | 55.0% | |
| !! | GTAGACTTTCCTGATGGCGG+GGG | + | chr2_1:15929530-15929549 | Msa0197740:intron | 55.0% |
| CAGCTCATCTTCGGATGACG+TGG | + | chr2_1:15929910-15929929 | Msa0197740:intron | 55.0% | |
| ! | AGAAGAAGCATGGAAGCGCG+AGG | + | chr2_1:15930108-15930127 | Msa0197740:CDS | 55.0% |
| GCAGGACGAAGAAGCTAGAG+CGG | + | chr2_1:15930147-15930166 | Msa0197740:CDS | 55.0% | |
| AAGAAGCTAGAGCGGCTGAG+AGG | + | chr2_1:15930155-15930174 | Msa0197740:CDS | 55.0% | |
| CAGATTCCTCCACCAGCAGA+AGG | + | chr2_1:15930232-15930251 | Msa0197740:CDS | 55.0% | |
| ATTCCGCTTCCTTCTGCTGG+TGG | - | chr2_1:15930244-15930263 | None:intergenic | 55.0% | |
| CTTAATCCAGTACGTGGGGC+CGG | + | chr2_1:15930369-15930388 | Msa0197740:CDS | 55.0% | |
| !! | GGAGATAGCTGGAGCATTGC+AGG | + | chr2_1:15930540-15930559 | Msa0197740:CDS | 55.0% |
| CAGTTGGGAGCGGCAAGAAA+CGG | + | chr2_1:15930635-15930654 | Msa0197740:CDS | 55.0% | |
| GGGGATTGTGGTGGTTGGAG+AGG | - | chr2_1:15928823-15928842 | None:intergenic | 60.0% | |
| GAGGAGGGATGGACCTGATG+GGG | - | chr2_1:15928856-15928875 | None:intergenic | 60.0% | |
| GGAGGAGGGATGGACCTGAT+GGG | - | chr2_1:15928857-15928876 | None:intergenic | 60.0% | |
| AGGAGGAGGGATGGACCTGA+TGG | - | chr2_1:15928858-15928877 | None:intergenic | 60.0% | |
| AAACCAGGAGGAGGAGGAGG+AGG | - | chr2_1:15928878-15928897 | None:intergenic | 60.0% | |
| GAAGGGAAACCAGGAGGAGG+AGG | - | chr2_1:15928884-15928903 | None:intergenic | 60.0% | |
| ! | GGTAGAGGGGTGTGGTGAGA+AGG | - | chr2_1:15928902-15928921 | None:intergenic | 60.0% |
| TGGAAGGTGGTAGAGGGGTG+TGG | - | chr2_1:15928910-15928929 | None:intergenic | 60.0% | |
| ! | GATCTGAAACCCCCGCCATC+AGG | - | chr2_1:15929542-15929561 | None:intergenic | 60.0% |
| ! | AGCATGGAAGCGCGAGGAGA+TGG | + | chr2_1:15930114-15930133 | Msa0197740:CDS | 60.0% |
| CCTCCACCAGCAGAAGGAAG+CGG | + | chr2_1:15930238-15930257 | Msa0197740:CDS | 60.0% | |
| CCACGTTGTGGGTCAAGGGT+GGG | - | chr2_1:15930312-15930331 | None:intergenic | 60.0% | |
| CCACCCTTGACCCACAACGT+GGG | + | chr2_1:15930310-15930329 | Msa0197740:CDS | 60.0% | |
| CACCCTTGACCCACAACGTG+GGG | + | chr2_1:15930311-15930330 | Msa0197740:CDS | 60.0% | |
| GACCCCACGTTGTGGGTCAA+GGG | - | chr2_1:15930316-15930335 | None:intergenic | 60.0% | |
| CTTGACCCACAACGTGGGGT+CGG | + | chr2_1:15930315-15930334 | Msa0197740:CDS | 60.0% | |
| CGGCCCCACGTACTGGATTA+AGG | - | chr2_1:15930371-15930390 | None:intergenic | 60.0% | |
| !! | AGCTGGAGCATTGCAGGGCA+TGG | + | chr2_1:15930546-15930565 | Msa0197740:CDS | 60.0% |
| !! | GCTGGAGCATTGCAGGGCAT+GGG | + | chr2_1:15930547-15930566 | Msa0197740:CDS | 60.0% |
| GGGGATTGTGGTGGTTGGAG+AGG | - | chr2_1:15928823-15928842 | None:intergenic | 60.0% | |
| GAGGAGGGATGGACCTGATG+GGG | - | chr2_1:15928856-15928875 | None:intergenic | 60.0% | |
| GGAGGAGGGATGGACCTGAT+GGG | - | chr2_1:15928857-15928876 | None:intergenic | 60.0% | |
| AGGAGGAGGGATGGACCTGA+TGG | - | chr2_1:15928858-15928877 | None:intergenic | 60.0% | |
| AAACCAGGAGGAGGAGGAGG+AGG | - | chr2_1:15928878-15928897 | None:intergenic | 60.0% | |
| GAAGGGAAACCAGGAGGAGG+AGG | - | chr2_1:15928884-15928903 | None:intergenic | 60.0% | |
| ! | GGTAGAGGGGTGTGGTGAGA+AGG | - | chr2_1:15928902-15928921 | None:intergenic | 60.0% |
| TGGAAGGTGGTAGAGGGGTG+TGG | - | chr2_1:15928910-15928929 | None:intergenic | 60.0% | |
| ! | GATCTGAAACCCCCGCCATC+AGG | - | chr2_1:15929542-15929561 | None:intergenic | 60.0% |
| ! | AGCATGGAAGCGCGAGGAGA+TGG | + | chr2_1:15930114-15930133 | Msa0197740:CDS | 60.0% |
| CCTCCACCAGCAGAAGGAAG+CGG | + | chr2_1:15930238-15930257 | Msa0197740:CDS | 60.0% | |
| CCACGTTGTGGGTCAAGGGT+GGG | - | chr2_1:15930312-15930331 | None:intergenic | 60.0% | |
| CCACCCTTGACCCACAACGT+GGG | + | chr2_1:15930310-15930329 | Msa0197740:CDS | 60.0% | |
| CACCCTTGACCCACAACGTG+GGG | + | chr2_1:15930311-15930330 | Msa0197740:CDS | 60.0% | |
| GACCCCACGTTGTGGGTCAA+GGG | - | chr2_1:15930316-15930335 | None:intergenic | 60.0% | |
| CTTGACCCACAACGTGGGGT+CGG | + | chr2_1:15930315-15930334 | Msa0197740:CDS | 60.0% | |
| CGGCCCCACGTACTGGATTA+AGG | - | chr2_1:15930371-15930390 | None:intergenic | 60.0% | |
| !! | AGCTGGAGCATTGCAGGGCA+TGG | + | chr2_1:15930546-15930565 | Msa0197740:CDS | 60.0% |
| !! | GCTGGAGCATTGCAGGGCAT+GGG | + | chr2_1:15930547-15930566 | Msa0197740:CDS | 60.0% |
| AGGTCGCCGGAGTCGGGAAA+TGG | - | chr2_1:15928782-15928801 | None:intergenic | 65.0% | |
| GGCGGCGAAGATAAGGTCGC+CGG | - | chr2_1:15928795-15928814 | None:intergenic | 65.0% | |
| GGCGACCTTATCTTCGCCGC+CGG | + | chr2_1:15928794-15928813 | Msa0197740:CDS | 65.0% | |
| GTGGTGGTTGGAGAGGAGGC+CGG | - | chr2_1:15928816-15928835 | None:intergenic | 65.0% | |
| AGGAGGAGGAGGAGGAGGGA+TGG | - | chr2_1:15928867-15928886 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | - | chr2_1:15928871-15928890 | None:intergenic | 65.0% | |
| GGGAAACCAGGAGGAGGAGG+AGG | - | chr2_1:15928881-15928900 | None:intergenic | 65.0% | |
| GTCGAGGACCCGTCTCGATC+CGG | + | chr2_1:15928935-15928954 | Msa0197740:CDS | 65.0% | |
| TCGAGGACCCGTCTCGATCC+GGG | + | chr2_1:15928936-15928955 | Msa0197740:CDS | 65.0% | |
| TGACCCGACCCGGATCGAGA+CGG | - | chr2_1:15928947-15928966 | None:intergenic | 65.0% | |
| CCGCTTCCTTCTGCTGGTGG+AGG | - | chr2_1:15930241-15930260 | None:intergenic | 65.0% | |
| CCCACCCTTGACCCACAACG+TGG | + | chr2_1:15930309-15930328 | Msa0197740:CDS | 65.0% | |
| CCCACGTTGTGGGTCAAGGG+TGG | - | chr2_1:15930313-15930332 | None:intergenic | 65.0% | |
| CGACCCCACGTTGTGGGTCA+AGG | - | chr2_1:15930317-15930336 | None:intergenic | 65.0% | |
| CTCAGCCGACCCCACGTTGT+GGG | - | chr2_1:15930323-15930342 | None:intergenic | 65.0% | |
| AGGTCGCCGGAGTCGGGAAA+TGG | - | chr2_1:15928782-15928801 | None:intergenic | 65.0% | |
| GGCGGCGAAGATAAGGTCGC+CGG | - | chr2_1:15928795-15928814 | None:intergenic | 65.0% | |
| GGCGACCTTATCTTCGCCGC+CGG | + | chr2_1:15928794-15928813 | Msa0197740:CDS | 65.0% | |
| GTGGTGGTTGGAGAGGAGGC+CGG | - | chr2_1:15928816-15928835 | None:intergenic | 65.0% | |
| AGGAGGAGGAGGAGGAGGGA+TGG | - | chr2_1:15928867-15928886 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | - | chr2_1:15928871-15928890 | None:intergenic | 65.0% | |
| GGGAAACCAGGAGGAGGAGG+AGG | - | chr2_1:15928881-15928900 | None:intergenic | 65.0% | |
| GTCGAGGACCCGTCTCGATC+CGG | + | chr2_1:15928935-15928954 | Msa0197740:CDS | 65.0% | |
| TCGAGGACCCGTCTCGATCC+GGG | + | chr2_1:15928936-15928955 | Msa0197740:CDS | 65.0% | |
| TGACCCGACCCGGATCGAGA+CGG | - | chr2_1:15928947-15928966 | None:intergenic | 65.0% | |
| CCGCTTCCTTCTGCTGGTGG+AGG | - | chr2_1:15930241-15930260 | None:intergenic | 65.0% | |
| CCCACCCTTGACCCACAACG+TGG | + | chr2_1:15930309-15930328 | Msa0197740:CDS | 65.0% | |
| CCCACGTTGTGGGTCAAGGG+TGG | - | chr2_1:15930313-15930332 | None:intergenic | 65.0% | |
| CGACCCCACGTTGTGGGTCA+AGG | - | chr2_1:15930317-15930336 | None:intergenic | 65.0% | |
| CTCAGCCGACCCCACGTTGT+GGG | - | chr2_1:15930323-15930342 | None:intergenic | 65.0% | |
| CAACATGGTCGGCGGCGAGG+AGG | - | chr2_1:15928757-15928776 | None:intergenic | 70.0% | |
| GAGCAACATGGTCGGCGGCG+AGG | - | chr2_1:15928760-15928779 | None:intergenic | 70.0% | |
| GGAGGCCGGCGGCGAAGATA+AGG | - | chr2_1:15928802-15928821 | None:intergenic | 70.0% | |
| GTGGTTGGAGAGGAGGCCGG+CGG | - | chr2_1:15928813-15928832 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr2_1:15928869-15928888 | None:intergenic | 70.0% | |
| CCAGGAGGAGGAGGAGGAGG+AGG | - | chr2_1:15928875-15928894 | None:intergenic | 70.0% | |
| CCTCCTCCTCCTCCTCCTCC+TGG | + | chr2_1:15928869-15928888 | Msa0197740:CDS | 70.0% | |
| GGACCCGTCTCGATCCGGGT+CGG | + | chr2_1:15928940-15928959 | Msa0197740:CDS | 70.0% | |
| GACCCGTCTCGATCCGGGTC+GGG | + | chr2_1:15928941-15928960 | Msa0197740:CDS | 70.0% | |
| GACCCGACCCGGATCGAGAC+GGG | - | chr2_1:15928946-15928965 | None:intergenic | 70.0% | |
| CCTCAGCCGACCCCACGTTG+TGG | - | chr2_1:15930324-15930343 | None:intergenic | 70.0% | |
| CCACAACGTGGGGTCGGCTG+AGG | + | chr2_1:15930321-15930340 | Msa0197740:CDS | 70.0% | |
| CAACATGGTCGGCGGCGAGG+AGG | - | chr2_1:15928757-15928776 | None:intergenic | 70.0% | |
| GAGCAACATGGTCGGCGGCG+AGG | - | chr2_1:15928760-15928779 | None:intergenic | 70.0% | |
| GGAGGCCGGCGGCGAAGATA+AGG | - | chr2_1:15928802-15928821 | None:intergenic | 70.0% | |
| GTGGTTGGAGAGGAGGCCGG+CGG | - | chr2_1:15928813-15928832 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr2_1:15928869-15928888 | None:intergenic | 70.0% | |
| CCAGGAGGAGGAGGAGGAGG+AGG | - | chr2_1:15928875-15928894 | None:intergenic | 70.0% | |
| CCTCCTCCTCCTCCTCCTCC+TGG | + | chr2_1:15928869-15928888 | Msa0197740:CDS | 70.0% | |
| GGACCCGTCTCGATCCGGGT+CGG | + | chr2_1:15928940-15928959 | Msa0197740:CDS | 70.0% | |
| GACCCGTCTCGATCCGGGTC+GGG | + | chr2_1:15928941-15928960 | Msa0197740:CDS | 70.0% | |
| GACCCGACCCGGATCGAGAC+GGG | - | chr2_1:15928946-15928965 | None:intergenic | 70.0% | |
| CCTCAGCCGACCCCACGTTG+TGG | - | chr2_1:15930324-15930343 | None:intergenic | 70.0% | |
| CCACAACGTGGGGTCGGCTG+AGG | + | chr2_1:15930321-15930340 | Msa0197740:CDS | 70.0% | |
| CCTCAGCCGGCCCCACGTAC+TGG | - | chr2_1:15930378-15930397 | None:intergenic | 75.0% | |
| CCAGTACGTGGGGCCGGCTG+AGG | + | chr2_1:15930375-15930394 | Msa0197740:CDS | 75.0% | |
| CCTCAGCCGGCCCCACGTAC+TGG | - | chr2_1:15930378-15930397 | None:intergenic | 75.0% | |
| CCAGTACGTGGGGCCGGCTG+AGG | + | chr2_1:15930375-15930394 | Msa0197740:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 15928675 | 15930950 | 15928675 | ID=Msa0197740;Name=Msa0197740 |
| chr2_1 | mRNA | 15928675 | 15930950 | 15928675 | ID=Msa0197740-mRNA-1;Parent=Msa0197740;Name=Msa0197740-mRNA-1;_AED=0.01;_eAED=0.01;_QI=65|1|1|1|1|1|2|152|380 |
| chr2_1 | exon | 15928675 | 15928996 | 15928675 | ID=Msa0197740-mRNA-1:exon:6646;Parent=Msa0197740-mRNA-1 |
| chr2_1 | exon | 15929913 | 15930950 | 15929913 | ID=Msa0197740-mRNA-1:exon:6647;Parent=Msa0197740-mRNA-1 |
| chr2_1 | five_prime_UTR | 15928675 | 15928739 | 15928675 | ID=Msa0197740-mRNA-1:five_prime_utr;Parent=Msa0197740-mRNA-1 |
| chr2_1 | CDS | 15928740 | 15928996 | 15928740 | ID=Msa0197740-mRNA-1:cds;Parent=Msa0197740-mRNA-1 |
| chr2_1 | CDS | 15929913 | 15930798 | 15929913 | ID=Msa0197740-mRNA-1:cds;Parent=Msa0197740-mRNA-1 |
| chr2_1 | three_prime_UTR | 15930799 | 15930950 | 15930799 | ID=Msa0197740-mRNA-1:three_prime_utr;Parent=Msa0197740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
