Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239620 | XP_013462948.1 | 93.947 | 380 | 21 | 2 | 1 | 380 | 1 | 378 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239620 | sp|Q39117|TGT2_ARATH | 37.879 | 264 | 127 | 5 | 103 | 355 | 253 | 490 | 5.24e-44 | 163 |
| Msa0239620 | sp|Q39117|TGT2_ARATH | 41.176 | 85 | 49 | 1 | 264 | 348 | 41 | 124 | 2.97e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239620 | A0A072V6L9 | 93.947 | 380 | 21 | 2 | 1 | 380 | 1 | 378 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0239620 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197740 | Msa0239620 | 0.926310 | 5.586089e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239620 | MtrunA17_Chr2g0290511 | 93.947 | 380 | 21 | 2 | 1 | 380 | 1 | 378 | 0.0 | 647 |
| Msa0239620 | MtrunA17_Chr1g0201941 | 38.387 | 310 | 152 | 7 | 77 | 352 | 238 | 542 | 2.84e-53 | 186 |
| Msa0239620 | MtrunA17_Chr1g0201941 | 41.379 | 87 | 50 | 1 | 264 | 350 | 57 | 142 | 1.79e-15 | 78.2 |
| Msa0239620 | MtrunA17_Chr1g0201911 | 37.165 | 261 | 121 | 6 | 106 | 352 | 229 | 460 | 5.26e-43 | 157 |
| Msa0239620 | MtrunA17_Chr1g0201911 | 42.529 | 87 | 49 | 1 | 264 | 350 | 55 | 140 | 3.21e-15 | 77.0 |
| Msa0239620 | MtrunA17_Chr1g0190851 | 31.935 | 310 | 154 | 8 | 105 | 374 | 238 | 530 | 1.09e-34 | 134 |
| Msa0239620 | MtrunA17_Chr6g0463941 | 60.870 | 92 | 36 | 0 | 261 | 352 | 461 | 552 | 2.73e-33 | 131 |
| Msa0239620 | MtrunA17_Chr6g0463941 | 38.710 | 93 | 56 | 1 | 264 | 356 | 55 | 146 | 8.10e-16 | 79.0 |
| Msa0239620 | MtrunA17_Chr7g0273941 | 30.233 | 258 | 139 | 8 | 115 | 351 | 240 | 477 | 2.04e-29 | 118 |
| Msa0239620 | MtrunA17_Chr1g0198171 | 26.939 | 245 | 129 | 7 | 96 | 333 | 283 | 484 | 2.45e-16 | 80.5 |
| Msa0239620 | MtrunA17_Chr1g0198171 | 33.333 | 132 | 83 | 4 | 220 | 350 | 73 | 200 | 1.76e-13 | 71.6 |
| Msa0239620 | MtrunA17_Chr1g0179191 | 37.755 | 98 | 59 | 2 | 255 | 351 | 122 | 218 | 6.01e-14 | 73.2 |
| Msa0239620 | MtrunA17_Chr7g0265831 | 36.735 | 98 | 60 | 2 | 255 | 351 | 106 | 202 | 4.74e-13 | 70.5 |
| Msa0239620 | MtrunA17_Chr7g0265831 | 29.091 | 165 | 93 | 5 | 101 | 241 | 268 | 432 | 5.91e-11 | 63.9 |
| Msa0239620 | MtrunA17_Chr5g0409071 | 31.683 | 101 | 64 | 2 | 260 | 358 | 41 | 138 | 5.56e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239620 | AT5G47660.1 | 41.200 | 250 | 121 | 3 | 106 | 355 | 169 | 392 | 3.77e-51 | 176 |
| Msa0239620 | AT1G76890.2 | 37.879 | 264 | 127 | 5 | 103 | 355 | 253 | 490 | 5.33e-45 | 163 |
| Msa0239620 | AT1G76890.2 | 41.176 | 85 | 49 | 1 | 264 | 348 | 41 | 124 | 3.02e-14 | 74.7 |
| Msa0239620 | AT1G76880.1 | 37.097 | 248 | 145 | 4 | 118 | 359 | 257 | 499 | 3.81e-41 | 153 |
| Msa0239620 | AT1G76880.1 | 41.379 | 87 | 50 | 1 | 264 | 350 | 61 | 146 | 2.30e-14 | 75.1 |
| Msa0239620 | AT5G28300.1 | 35.271 | 258 | 146 | 5 | 115 | 351 | 299 | 556 | 5.18e-37 | 142 |
| Msa0239620 | AT1G33240.3 | 54.839 | 93 | 42 | 0 | 264 | 356 | 435 | 527 | 6.21e-29 | 118 |
| Msa0239620 | AT1G33240.3 | 39.080 | 87 | 52 | 1 | 264 | 350 | 62 | 147 | 2.42e-13 | 72.0 |
| Msa0239620 | AT1G33240.1 | 54.839 | 93 | 42 | 0 | 264 | 356 | 435 | 527 | 8.61e-29 | 118 |
| Msa0239620 | AT1G33240.1 | 39.080 | 87 | 52 | 1 | 264 | 350 | 62 | 147 | 2.47e-13 | 72.0 |
| Msa0239620 | AT1G33240.2 | 54.839 | 93 | 42 | 0 | 264 | 356 | 396 | 488 | 1.17e-28 | 117 |
| Msa0239620 | AT5G03680.1 | 29.181 | 281 | 158 | 7 | 76 | 344 | 255 | 506 | 1.59e-18 | 87.8 |
| Msa0239620 | AT5G03680.1 | 41.573 | 89 | 50 | 2 | 264 | 351 | 119 | 206 | 2.09e-14 | 75.1 |
| Msa0239620 | AT3G10000.1 | 35.433 | 127 | 77 | 3 | 226 | 351 | 54 | 176 | 1.88e-16 | 81.3 |
| Msa0239620 | AT3G10000.2 | 33.333 | 126 | 71 | 3 | 226 | 351 | 54 | 166 | 1.33e-13 | 72.4 |
Find 145 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAGGGTTACTGCCTTAC+TGG | 0.202198 | 2_2:-14091067 | None:intergenic |
| AGACGGGTCCTCGACCTTTA+TGG | 0.221031 | 2_2:-14091313 | None:intergenic |
| GTTACTGCCTTACTGGTTAC+TGG | 0.258600 | 2_2:-14091060 | None:intergenic |
| TACAAGAACATGCAAAATTT+AGG | 0.284429 | 2_2:-14093280 | None:intergenic |
| ATCGCTGATTCAGAAACTAT+TGG | 0.316999 | 2_2:+14092578 | Msa0239620:CDS |
| TTGCCCTTACTTTGACGAAT+TGG | 0.318055 | 2_2:+14093055 | Msa0239620:CDS |
| AAATTTGATAATCATAAATA+TGG | 0.319593 | 2_2:+14093171 | Msa0239620:exon |
| GGAGATAGCTGGAGCATTGC+AGG | 0.341688 | 2_2:+14092920 | Msa0239620:CDS |
| TGGGATCGAAAGGATCAATA+TGG | 0.344397 | 2_2:+14092895 | Msa0239620:CDS |
| TTGGACAATCTGTATAGAAA+TGG | 0.356199 | 2_2:+14093074 | Msa0239620:CDS |
| GGAACACAAGTTCGGTCATA+TGG | 0.359379 | 2_2:+14092875 | Msa0239620:CDS |
| CGGCCCCACGTACTGGATTA+AGG | 0.364776 | 2_2:-14092748 | None:intergenic |
| CGAAGAAGTGCAAGGAGAAA+TGG | 0.367920 | 2_2:+14092964 | Msa0239620:CDS |
| GGGAAACCAGGAGGAGGAGG+AGG | 0.384212 | 2_2:-14091264 | None:intergenic |
| TCGCTGATTCAGAAACTATT+GGG | 0.386057 | 2_2:+14092579 | Msa0239620:CDS |
| CTTATTCCGCTTCCTTCTGC+TGG | 0.387343 | 2_2:-14092624 | None:intergenic |
| TTCCCTTATGGAAACATTGT+TGG | 0.404001 | 2_2:-14093132 | None:intergenic |
| GGTAGAGGGGTGTGGTGAGA+AGG | 0.405204 | 2_2:-14091285 | None:intergenic |
| CCTCAGCCGGCCCCACGTAC+TGG | 0.407040 | 2_2:-14092755 | None:intergenic |
| GTCGAGGACCCGTCTCGATC+CGG | 0.413921 | 2_2:+14091321 | Msa0239620:CDS |
| CCCTCTACCACCTTCCATAA+AGG | 0.418335 | 2_2:+14091299 | Msa0239620:CDS |
| AGGTCGCCGGAGTCGGGAAA+TGG | 0.420361 | 2_2:-14091165 | None:intergenic |
| AGCTGGAGCATTGCAGGGCA+TGG | 0.423836 | 2_2:+14092926 | Msa0239620:CDS |
| AAAACATCAATAAGTACTAT+AGG | 0.424007 | 2_2:+14092988 | Msa0239620:CDS |
| GAAGGGAAACCAGGAGGAGG+AGG | 0.425874 | 2_2:-14091267 | None:intergenic |
| TTGTTATTGCTCACCTCAGC+CGG | 0.426631 | 2_2:-14092768 | None:intergenic |
| GCGATCCAAGTAACAGTAGA+TGG | 0.427115 | 2_2:+14092808 | Msa0239620:CDS |
| CGACCCCACGTTGTGGGTCA+AGG | 0.431970 | 2_2:-14092694 | None:intergenic |
| TTGTCCAATTCGTCAAAGTA+AGG | 0.432653 | 2_2:-14093059 | None:intergenic |
| TCATCATTTCAGCTCATCTT+CGG | 0.432989 | 2_2:+14092281 | Msa0239620:intron |
| AATGGGTCCTTGGAGAGAAA+TGG | 0.436187 | 2_2:+14093092 | Msa0239620:CDS |
| GGGGATTGTGGTGGTTGGAG+AGG | 0.440819 | 2_2:-14091206 | None:intergenic |
| AGAGCAGATGCATAAAGAAT+TGG | 0.442580 | 2_2:+14092425 | Msa0239620:CDS |
| ATACCAACAATGTTTCCATA+AGG | 0.443747 | 2_2:+14093129 | Msa0239620:CDS |
| AGCATGGAAGCGCGAGGAGA+TGG | 0.446602 | 2_2:+14092494 | Msa0239620:CDS |
| TTGCAGCAAATTTGGTAAAG+AGG | 0.450584 | 2_2:+14092388 | Msa0239620:CDS |
| ACCTTTATGGAAGGTGGTAG+AGG | 0.453928 | 2_2:-14091300 | None:intergenic |
| AGCGCTTGTACTTCAACATC+TGG | 0.456538 | 2_2:-14092831 | None:intergenic |
| GTTTCTGAATCAGCGATATG+AGG | 0.456889 | 2_2:-14092572 | None:intergenic |
| AAGATAAGGTCGCCGGAGTC+GGG | 0.457626 | 2_2:-14091171 | None:intergenic |
| AGGAGGAGGGATGGACCTGA+TGG | 0.458333 | 2_2:-14091241 | None:intergenic |
| GAGAAAGAGTTCGAGAAAGC+TGG | 0.464906 | 2_2:+14092359 | Msa0239620:CDS |
| CCAGTACGTGGGGCCGGCTG+AGG | 0.465622 | 2_2:+14092755 | Msa0239620:CDS |
| CTGTCCATGGTGTGTGGTAA+TGG | 0.466957 | 2_2:-14091111 | None:intergenic |
| TGTTTCCATAAGGGAAGAAA+AGG | 0.473178 | 2_2:+14093139 | Msa0239620:CDS |
| GACCCGTCTCGATCCGGGTC+GGG | 0.479636 | 2_2:+14091327 | Msa0239620:CDS |
| TGGACAATCTGTATAGAAAT+GGG | 0.482755 | 2_2:+14093075 | Msa0239620:CDS |
| GTGTGGTGAGAAGGGAAACC+AGG | 0.486892 | 2_2:-14091276 | None:intergenic |
| CCGCTTCCTTCTGCTGGTGG+AGG | 0.487836 | 2_2:-14092618 | None:intergenic |
| GTAGAGGGGTGTGGTGAGAA+GGG | 0.489814 | 2_2:-14091284 | None:intergenic |
| TCGAGGACCCGTCTCGATCC+GGG | 0.493085 | 2_2:+14091322 | Msa0239620:CDS |
| GACCCGACCCGGATCGAGAC+GGG | 0.496300 | 2_2:-14091329 | None:intergenic |
| TCTGGCCATCTACTGTTACT+TGG | 0.497676 | 2_2:-14092813 | None:intergenic |
| GAAGATAAGGTCGCCGGAGT+CGG | 0.499156 | 2_2:-14091172 | None:intergenic |
| TGGAAGGTGGTAGAGGGGTG+TGG | 0.500655 | 2_2:-14091293 | None:intergenic |
| CCACAACGTGGGGTCGGCTG+AGG | 0.501288 | 2_2:+14092701 | Msa0239620:CDS |
| CTCAGCCGACCCCACGTTGT+GGG | 0.501316 | 2_2:-14092700 | None:intergenic |
| TCAATATGGGAGGAGATAGC+TGG | 0.501950 | 2_2:+14092909 | Msa0239620:CDS |
| TGCATTTCCATTTCTCTCCA+AGG | 0.502699 | 2_2:-14093099 | None:intergenic |
| AAGAGAAGAGGATGAAGTTG+AGG | 0.502881 | 2_2:+14092644 | Msa0239620:CDS |
| TCTGTATAGAAATGGGTCCT+TGG | 0.503578 | 2_2:+14093082 | Msa0239620:CDS |
| GATTGTGGTGGTTGGAGAGG+AGG | 0.505297 | 2_2:-14091203 | None:intergenic |
| GCAGATGCATAAAGAATTGG+TGG | 0.506304 | 2_2:+14092428 | Msa0239620:CDS |
| GGAGGAGGGATGGACCTGAT+GGG | 0.508730 | 2_2:-14091240 | None:intergenic |
| GGAGGCCGGCGGCGAAGATA+AGG | 0.508923 | 2_2:-14091185 | None:intergenic |
| TACCAACAATGTTTCCATAA+GGG | 0.510070 | 2_2:+14093130 | Msa0239620:CDS |
| ATTCCGCTTCCTTCTGCTGG+TGG | 0.513116 | 2_2:-14092621 | None:intergenic |
| CAGCTCATCTTCGGATGACG+TGG | 0.514862 | 2_2:+14092290 | Msa0239620:intron |
| GTGGTGGTTGGAGAGGAGGC+CGG | 0.515979 | 2_2:-14091199 | None:intergenic |
| CAGTTGGGAGCGGCAAGAAA+CGG | 0.517486 | 2_2:+14093015 | Msa0239620:CDS |
| ATGAAACAAACGGCGGCGTG+AGG | 0.519726 | 2_2:-14091083 | None:intergenic |
| GGATAAAGAGAGAAGAAGCA+TGG | 0.520205 | 2_2:+14092478 | Msa0239620:CDS |
| ACCGCATTGGAACACAAGTT+CGG | 0.524498 | 2_2:+14092867 | Msa0239620:CDS |
| GAAGAAGTGCAAGGAGAAAT+GGG | 0.526951 | 2_2:+14092965 | Msa0239620:CDS |
| AGTACTATAGGAGGACAGTT+GGG | 0.527630 | 2_2:+14093000 | Msa0239620:CDS |
| AATGATTGAGAGGATGGAAA+AGG | 0.532492 | 2_2:+14092452 | Msa0239620:CDS |
| CCCACGTTGTGGGTCAAGGG+TGG | 0.532882 | 2_2:-14092690 | None:intergenic |
| CATAAGGGAAGAAAAGGAGC+AGG | 0.532990 | 2_2:+14093145 | Msa0239620:CDS |
| CCTCAGCCGACCCCACGTTG+TGG | 0.533841 | 2_2:-14092701 | None:intergenic |
| GAGGAGGTTCATGCTGTCCA+TGG | 0.533970 | 2_2:-14091124 | None:intergenic |
| TGAAACAAACGGCGGCGTGA+GGG | 0.536561 | 2_2:-14091082 | None:intergenic |
| GGTGGAAATGATTGAGAGGA+TGG | 0.536865 | 2_2:+14092446 | Msa0239620:CDS |
| GCTGGAGCATTGCAGGGCAT+GGG | 0.538046 | 2_2:+14092927 | Msa0239620:CDS |
| GTCGCTCCATTTCCCGACTC+CGG | 0.538614 | 2_2:+14091159 | Msa0239620:CDS |
| CCTTTATGGAAGGTGGTAGA+GGG | 0.540722 | 2_2:-14091299 | None:intergenic |
| CTTAATCCAGTACGTGGGGC+CGG | 0.542332 | 2_2:+14092749 | Msa0239620:CDS |
| GAGGAGGGATGGACCTGATG+GGG | 0.543104 | 2_2:-14091239 | None:intergenic |
| GAACACAAGTTCGGTCATAT+GGG | 0.545310 | 2_2:+14092876 | Msa0239620:CDS |
| GGAGATGGAGAGAATTAAGC+AGG | 0.547111 | 2_2:+14092509 | Msa0239620:CDS |
| GGGATCGAAAGGATCAATAT+GGG | 0.547722 | 2_2:+14092896 | Msa0239620:CDS |
| CCACGTTGTGGGTCAAGGGT+GGG | 0.550717 | 2_2:-14092689 | None:intergenic |
| GACCCCACGTTGTGGGTCAA+GGG | 0.551673 | 2_2:-14092693 | None:intergenic |
| AAGTACTATAGGAGGACAGT+TGG | 0.558326 | 2_2:+14092999 | Msa0239620:CDS |
| TTCGGTCATATGGGATCGAA+AGG | 0.560164 | 2_2:+14092885 | Msa0239620:CDS |
| CATAGCAGTAAGAACCGCAT+TGG | 0.560429 | 2_2:+14092854 | Msa0239620:CDS |
| CCTCCACCAGCAGAAGGAAG+CGG | 0.560638 | 2_2:+14092618 | Msa0239620:CDS |
| GGACCCGTCTCGATCCGGGT+CGG | 0.561874 | 2_2:+14091326 | Msa0239620:CDS |
| TGAGAAGGGAAACCAGGAGG+AGG | 0.562570 | 2_2:-14091270 | None:intergenic |
| CAAAGAAGAATGACCCGACC+CGG | 0.563112 | 2_2:-14091340 | None:intergenic |
| CTGGATTAAGGCTAGGCTGT+TGG | 0.565938 | 2_2:-14092736 | None:intergenic |
| CTTGACCCACAACGTGGGGT+CGG | 0.569379 | 2_2:+14092695 | Msa0239620:CDS |
| CGACATGGTCGGCGGCGAGG+AGG | 0.575497 | 2_2:-14091140 | None:intergenic |
| GGCGACCTTATCTTCGCCGC+CGG | 0.577427 | 2_2:+14091180 | Msa0239620:CDS |
| TTACCAGCCAGTAACCAGTA+AGG | 0.581049 | 2_2:+14091053 | None:intergenic |
| TCCTCGACCTTTATGGAAGG+TGG | 0.582785 | 2_2:-14091306 | None:intergenic |
| TTTCTGAATCAGCGATATGA+GGG | 0.586770 | 2_2:-14092571 | None:intergenic |
| TTTACCATTACCACACACCA+TGG | 0.592619 | 2_2:+14091107 | Msa0239620:exon |
| AGAACATGCAAAATTTAGGA+TGG | 0.593980 | 2_2:-14093276 | None:intergenic |
| CAGATTCCTCCACCAGCAGA+AGG | 0.594230 | 2_2:+14092612 | Msa0239620:CDS |
| CCCACCCTTGACCCACAACG+TGG | 0.596089 | 2_2:+14092689 | Msa0239620:CDS |
| CCACGTACTGGATTAAGGCT+AGG | 0.596198 | 2_2:-14092743 | None:intergenic |
| CACCCTTGACCCACAACGTG+GGG | 0.600798 | 2_2:+14092691 | Msa0239620:CDS |
| AATTCAGCTCAAGAAAGAGA+AGG | 0.601809 | 2_2:+14092337 | Msa0239620:CDS |
| CCACCCTTGACCCACAACGT+GGG | 0.601931 | 2_2:+14092690 | Msa0239620:CDS |
| GGCGGCGAAGATAAGGTCGC+CGG | 0.602029 | 2_2:-14091178 | None:intergenic |
| TGTCCAATTCGTCAAAGTAA+GGG | 0.602664 | 2_2:-14093058 | None:intergenic |
| TGACCCGACCCGGATCGAGA+CGG | 0.603647 | 2_2:-14091330 | None:intergenic |
| TTGAGAGGATGGAAAAGGAA+AGG | 0.604583 | 2_2:+14092457 | Msa0239620:CDS |
| GGGAAATGGAGCGACATGGT+CGG | 0.605417 | 2_2:-14091151 | None:intergenic |
| ACCACCTTCCATAAAGGTCG+AGG | 0.606661 | 2_2:+14091305 | Msa0239620:CDS |
| TATAGGAGGACAGTTGGGAG+CGG | 0.607290 | 2_2:+14093005 | Msa0239620:CDS |
| AGCTCATCTTCGGATGACGT+GGG | 0.607626 | 2_2:+14092291 | Msa0239620:intron |
| GAGCGACATGGTCGGCGGCG+AGG | 0.618741 | 2_2:-14091143 | None:intergenic |
| ACATCAATAAGTACTATAGG+AGG | 0.623811 | 2_2:+14092991 | Msa0239620:CDS |
| CCTAGCCTTAATCCAGTACG+TGG | 0.624810 | 2_2:+14092743 | Msa0239620:CDS |
| GAGATAGCTGGAGCATTGCA+GGG | 0.625252 | 2_2:+14092921 | Msa0239620:CDS |
| GTGGTTGGAGAGGAGGCCGG+CGG | 0.625523 | 2_2:-14091196 | None:intergenic |
| TTCATGCTGTCCATGGTGTG+TGG | 0.629676 | 2_2:-14091117 | None:intergenic |
| GCAGGACGAAGAAGCTAGAG+CGG | 0.631131 | 2_2:+14092527 | Msa0239620:CDS |
| AATTGGTGGAAATGATTGAG+AGG | 0.633368 | 2_2:+14092442 | Msa0239620:CDS |
| AGAAGAAGCATGGAAGCGCG+AGG | 0.638350 | 2_2:+14092488 | Msa0239620:CDS |
| AGTCGGGAAATGGAGCGACA+TGG | 0.640542 | 2_2:-14091155 | None:intergenic |
| TCGTTCTGCGAAGAAGTGCA+AGG | 0.647147 | 2_2:+14092956 | Msa0239620:CDS |
| AGGAAGCGGAATAAGAGAAG+AGG | 0.647234 | 2_2:+14092632 | Msa0239620:CDS |
| AAGAAGCTAGAGCGGCTGAG+AGG | 0.648990 | 2_2:+14092535 | Msa0239620:CDS |
| AAATGGAGCGACATGGTCGG+CGG | 0.652690 | 2_2:-14091148 | None:intergenic |
| GGGTCCTCGACCTTTATGGA+AGG | 0.655244 | 2_2:-14091309 | None:intergenic |
| CTTTATGGAAGGTGGTAGAG+GGG | 0.657356 | 2_2:-14091298 | None:intergenic |
| AAATTTGGTAAAGAGGATGA+CGG | 0.659081 | 2_2:+14092395 | Msa0239620:CDS |
| ACCGAACTTGTGTTCCAATG+CGG | 0.661234 | 2_2:-14092868 | None:intergenic |
| ATCGAAAGGATCAATATGGG+AGG | 0.667283 | 2_2:+14092899 | Msa0239620:CDS |
| CTAGCCTTAATCCAGTACGT+GGG | 0.678764 | 2_2:+14092744 | Msa0239620:CDS |
| TGGTGAGAAGGGAAACCAGG+AGG | 0.688570 | 2_2:-14091273 | None:intergenic |
| TAGCCTTAATCCAGTACGTG+GGG | 0.690775 | 2_2:+14092745 | Msa0239620:CDS |
| ATAAGGGAAGAAAAGGAGCA+GGG | 0.692895 | 2_2:+14093146 | Msa0239620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTTATCTTTTTTATTT+TGG | + | chr2_2:14091445-14091464 | Msa0239620:intron | 10.0% |
| !!! | AAATTTGATAATCATAAATA+TGG | + | chr2_2:14093171-14093190 | Msa0239620:exon | 10.0% |
| !!! | TCTTTTTATCTTTTTTATTT+TGG | + | chr2_2:14091445-14091464 | Msa0239620:intron | 10.0% |
| !!! | AAATTTGATAATCATAAATA+TGG | + | chr2_2:14093171-14093190 | Msa0239620:exon | 10.0% |
| !!! | AACTATTATCCATTTATTTT+GGG | + | chr2_2:14092199-14092218 | Msa0239620:intron | 15.0% |
| !!! | AACTATTATCCATTTATTTT+GGG | + | chr2_2:14092199-14092218 | Msa0239620:intron | 15.0% |
| !! | AATGGTAAAAATGAAACAAA+CGG | - | chr2_2:14091096-14091115 | None:intergenic | 20.0% |
| !!! | TATTTTGGTTGAAAAATCAA+TGG | + | chr2_2:14091460-14091479 | Msa0239620:intron | 20.0% |
| !! | AAATCAATGGTTAAACAATT+AGG | + | chr2_2:14091473-14091492 | Msa0239620:intron | 20.0% |
| !! | ATCAATATTAAATGGTTTGA+GGG | + | chr2_2:14091852-14091871 | Msa0239620:intron | 20.0% |
| !! | ATATATGCTACATAAAAACT+TGG | - | chr2_2:14091972-14091991 | None:intergenic | 20.0% |
| !! | AGCATATATAATAGTTCATT+AGG | + | chr2_2:14091983-14092002 | Msa0239620:intron | 20.0% |
| !!! | GAACTATTATCCATTTATTT+TGG | + | chr2_2:14092198-14092217 | Msa0239620:intron | 20.0% |
| !!! | ACTATTATCCATTTATTTTG+GGG | + | chr2_2:14092200-14092219 | Msa0239620:intron | 20.0% |
| !! | AAAACATCAATAAGTACTAT+AGG | + | chr2_2:14092988-14093007 | Msa0239620:CDS | 20.0% |
| !!! | TACCAATTTTTTTACTGAAT+TGG | + | chr2_2:14093301-14093320 | Msa0239620:three_prime_UTR | 20.0% |
| !! | AATGGTAAAAATGAAACAAA+CGG | - | chr2_2:14091096-14091115 | None:intergenic | 20.0% |
| !!! | TATTTTGGTTGAAAAATCAA+TGG | + | chr2_2:14091460-14091479 | Msa0239620:intron | 20.0% |
| !! | AAATCAATGGTTAAACAATT+AGG | + | chr2_2:14091473-14091492 | Msa0239620:intron | 20.0% |
| !! | ATCAATATTAAATGGTTTGA+GGG | + | chr2_2:14091852-14091871 | Msa0239620:intron | 20.0% |
| !! | ATATATGCTACATAAAAACT+TGG | - | chr2_2:14091972-14091991 | None:intergenic | 20.0% |
| !! | AGCATATATAATAGTTCATT+AGG | + | chr2_2:14091983-14092002 | Msa0239620:intron | 20.0% |
| !!! | GAACTATTATCCATTTATTT+TGG | + | chr2_2:14092198-14092217 | Msa0239620:intron | 20.0% |
| !!! | ACTATTATCCATTTATTTTG+GGG | + | chr2_2:14092200-14092219 | Msa0239620:intron | 20.0% |
| !! | AAAACATCAATAAGTACTAT+AGG | + | chr2_2:14092988-14093007 | Msa0239620:CDS | 20.0% |
| !!! | TACCAATTTTTTTACTGAAT+TGG | + | chr2_2:14093301-14093320 | Msa0239620:three_prime_UTR | 20.0% |
| ! | GTAAAAACTTTACAAGCTAA+GGG | - | chr2_2:14091403-14091422 | None:intergenic | 25.0% |
| ! | AGTAAAAACTTTACAAGCTA+AGG | - | chr2_2:14091404-14091423 | None:intergenic | 25.0% |
| !!! | TGATGGTAAATGTTGTTTTA+TGG | + | chr2_2:14091718-14091737 | Msa0239620:intron | 25.0% |
| ! | GAAGAAAAAAGAATCATACA+AGG | + | chr2_2:14091753-14091772 | Msa0239620:intron | 25.0% |
| ! | ACTGTTGGATCAATATTAAA+TGG | + | chr2_2:14091844-14091863 | Msa0239620:intron | 25.0% |
| ! | GATCAATATTAAATGGTTTG+AGG | + | chr2_2:14091851-14091870 | Msa0239620:intron | 25.0% |
| !! | ATTCTTCTGCTATTTAGTAA+AGG | + | chr2_2:14092056-14092075 | Msa0239620:intron | 25.0% |
| !! | TTCTTCTGCTATTTAGTAAA+GGG | + | chr2_2:14092057-14092076 | Msa0239620:intron | 25.0% |
| ! | AACATTGGATAAATCTACTT+TGG | + | chr2_2:14092156-14092175 | Msa0239620:intron | 25.0% |
| ! | GATAAATCTACTTTGGATAA+AGG | + | chr2_2:14092163-14092182 | Msa0239620:intron | 25.0% |
| ! | ATGTTTAACCCCAAAATAAA+TGG | - | chr2_2:14092211-14092230 | None:intergenic | 25.0% |
| !!! | TTATTTTGGGGTTAAACATA+AGG | + | chr2_2:14092212-14092231 | Msa0239620:intron | 25.0% |
| ! | ATTCGAATCATTATCGTAAA+AGG | - | chr2_2:14092253-14092272 | None:intergenic | 25.0% |
| ! | AACAAAAAACATTTCAACAG+CGG | + | chr2_2:14092786-14092805 | Msa0239620:CDS | 25.0% |
| !!! | GAGTACTGAAAATTTTACAT+AGG | - | chr2_2:14093197-14093216 | None:intergenic | 25.0% |
| ! | TCTAAAAATGTTGCTCATTA+AGG | - | chr2_2:14093249-14093268 | None:intergenic | 25.0% |
| ! | TACAAGAACATGCAAAATTT+AGG | - | chr2_2:14093283-14093302 | None:intergenic | 25.0% |
| ! | GACCAATTCAGTAAAAAAAT+TGG | - | chr2_2:14093306-14093325 | None:intergenic | 25.0% |
| ! | GTAAAAACTTTACAAGCTAA+GGG | - | chr2_2:14091403-14091422 | None:intergenic | 25.0% |
| ! | AGTAAAAACTTTACAAGCTA+AGG | - | chr2_2:14091404-14091423 | None:intergenic | 25.0% |
| !!! | TGATGGTAAATGTTGTTTTA+TGG | + | chr2_2:14091718-14091737 | Msa0239620:intron | 25.0% |
| ! | GAAGAAAAAAGAATCATACA+AGG | + | chr2_2:14091753-14091772 | Msa0239620:intron | 25.0% |
| ! | ACTGTTGGATCAATATTAAA+TGG | + | chr2_2:14091844-14091863 | Msa0239620:intron | 25.0% |
| ! | GATCAATATTAAATGGTTTG+AGG | + | chr2_2:14091851-14091870 | Msa0239620:intron | 25.0% |
| !! | ATTCTTCTGCTATTTAGTAA+AGG | + | chr2_2:14092056-14092075 | Msa0239620:intron | 25.0% |
| !! | TTCTTCTGCTATTTAGTAAA+GGG | + | chr2_2:14092057-14092076 | Msa0239620:intron | 25.0% |
| ! | AACATTGGATAAATCTACTT+TGG | + | chr2_2:14092156-14092175 | Msa0239620:intron | 25.0% |
| ! | GATAAATCTACTTTGGATAA+AGG | + | chr2_2:14092163-14092182 | Msa0239620:intron | 25.0% |
| ! | ATGTTTAACCCCAAAATAAA+TGG | - | chr2_2:14092211-14092230 | None:intergenic | 25.0% |
| !!! | TTATTTTGGGGTTAAACATA+AGG | + | chr2_2:14092212-14092231 | Msa0239620:intron | 25.0% |
| ! | ATTCGAATCATTATCGTAAA+AGG | - | chr2_2:14092253-14092272 | None:intergenic | 25.0% |
| ! | AACAAAAAACATTTCAACAG+CGG | + | chr2_2:14092786-14092805 | Msa0239620:CDS | 25.0% |
| !!! | GAGTACTGAAAATTTTACAT+AGG | - | chr2_2:14093197-14093216 | None:intergenic | 25.0% |
| ! | TCTAAAAATGTTGCTCATTA+AGG | - | chr2_2:14093249-14093268 | None:intergenic | 25.0% |
| ! | TACAAGAACATGCAAAATTT+AGG | - | chr2_2:14093283-14093302 | None:intergenic | 25.0% |
| ! | GACCAATTCAGTAAAAAAAT+TGG | - | chr2_2:14093306-14093325 | None:intergenic | 25.0% |
| TGTGTTACAAACATGCAAAT+TGG | + | chr2_2:14091680-14091699 | Msa0239620:intron | 30.0% | |
| !!! | TGGTAAATGTTGTTTTATGG+TGG | + | chr2_2:14091721-14091740 | Msa0239620:intron | 30.0% |
| !! | TCATACAAGGTATTGTAGTT+TGG | + | chr2_2:14091766-14091785 | Msa0239620:intron | 30.0% |
| TGTTTGACTAACATAAATGC+CGG | - | chr2_2:14091818-14091837 | None:intergenic | 30.0% | |
| AGTCAAACAATTCAAACTGT+TGG | + | chr2_2:14091829-14091848 | Msa0239620:intron | 30.0% | |
| ! | TAATTTGTAGACTTTCCTGA+TGG | + | chr2_2:14091904-14091923 | Msa0239620:intron | 30.0% |
| !!! | ACTAGCTATGTTTTATTTGC+AGG | + | chr2_2:14091944-14091963 | Msa0239620:intron | 30.0% |
| TGGATAAAGGATATATCGAA+CGG | + | chr2_2:14092176-14092195 | Msa0239620:intron | 30.0% | |
| AAATTTGGTAAAGAGGATGA+CGG | + | chr2_2:14092395-14092414 | Msa0239620:CDS | 30.0% | |
| ACATCAATAAGTACTATAGG+AGG | + | chr2_2:14092991-14093010 | Msa0239620:CDS | 30.0% | |
| TTGGACAATCTGTATAGAAA+TGG | + | chr2_2:14093074-14093093 | Msa0239620:CDS | 30.0% | |
| TGGACAATCTGTATAGAAAT+GGG | + | chr2_2:14093075-14093094 | Msa0239620:CDS | 30.0% | |
| ATACCAACAATGTTTCCATA+AGG | + | chr2_2:14093129-14093148 | Msa0239620:CDS | 30.0% | |
| TACCAACAATGTTTCCATAA+GGG | + | chr2_2:14093130-14093149 | Msa0239620:CDS | 30.0% | |
| AGAACATGCAAAATTTAGGA+TGG | - | chr2_2:14093279-14093298 | None:intergenic | 30.0% | |
| TGTGTTACAAACATGCAAAT+TGG | + | chr2_2:14091680-14091699 | Msa0239620:intron | 30.0% | |
| !!! | TGGTAAATGTTGTTTTATGG+TGG | + | chr2_2:14091721-14091740 | Msa0239620:intron | 30.0% |
| !! | TCATACAAGGTATTGTAGTT+TGG | + | chr2_2:14091766-14091785 | Msa0239620:intron | 30.0% |
| TGTTTGACTAACATAAATGC+CGG | - | chr2_2:14091818-14091837 | None:intergenic | 30.0% | |
| AGTCAAACAATTCAAACTGT+TGG | + | chr2_2:14091829-14091848 | Msa0239620:intron | 30.0% | |
| ! | TAATTTGTAGACTTTCCTGA+TGG | + | chr2_2:14091904-14091923 | Msa0239620:intron | 30.0% |
| !!! | ACTAGCTATGTTTTATTTGC+AGG | + | chr2_2:14091944-14091963 | Msa0239620:intron | 30.0% |
| TGGATAAAGGATATATCGAA+CGG | + | chr2_2:14092176-14092195 | Msa0239620:intron | 30.0% | |
| AAATTTGGTAAAGAGGATGA+CGG | + | chr2_2:14092395-14092414 | Msa0239620:CDS | 30.0% | |
| ACATCAATAAGTACTATAGG+AGG | + | chr2_2:14092991-14093010 | Msa0239620:CDS | 30.0% | |
| TTGGACAATCTGTATAGAAA+TGG | + | chr2_2:14093074-14093093 | Msa0239620:CDS | 30.0% | |
| TGGACAATCTGTATAGAAAT+GGG | + | chr2_2:14093075-14093094 | Msa0239620:CDS | 30.0% | |
| ATACCAACAATGTTTCCATA+AGG | + | chr2_2:14093129-14093148 | Msa0239620:CDS | 30.0% | |
| TACCAACAATGTTTCCATAA+GGG | + | chr2_2:14093130-14093149 | Msa0239620:CDS | 30.0% | |
| AGAACATGCAAAATTTAGGA+TGG | - | chr2_2:14093279-14093298 | None:intergenic | 30.0% | |
| GGTAAAAATGAAACAAACGG+CGG | - | chr2_2:14091093-14091112 | None:intergenic | 35.0% | |
| GATAAAAGAAGAACTTACCC+GGG | - | chr2_2:14091381-14091400 | None:intergenic | 35.0% | |
| GGATAAAAGAAGAACTTACC+CGG | - | chr2_2:14091382-14091401 | None:intergenic | 35.0% | |
| GTATCTTGATGAGATAAGAG+TGG | + | chr2_2:14091634-14091653 | Msa0239620:intron | 35.0% | |
| GGTTACAGTACTTTGTATGA+TGG | + | chr2_2:14091701-14091720 | Msa0239620:intron | 35.0% | |
| ! | ATTTGCATTTTCGATCGTTG+TGG | + | chr2_2:14091789-14091808 | Msa0239620:intron | 35.0% |
| ! | CTATGTGCTATTGACAACAT+TGG | + | chr2_2:14092141-14092160 | Msa0239620:intron | 35.0% |
| GGGTTAAACATAAGGTTTGA+TGG | + | chr2_2:14092220-14092239 | Msa0239620:intron | 35.0% | |
| TCATCATTTCAGCTCATCTT+CGG | + | chr2_2:14092281-14092300 | Msa0239620:intron | 35.0% | |
| AATTCAGCTCAAGAAAGAGA+AGG | + | chr2_2:14092337-14092356 | Msa0239620:CDS | 35.0% | |
| ! | GGAAGATTTTGCAGCAAATT+TGG | + | chr2_2:14092380-14092399 | Msa0239620:CDS | 35.0% |
| TTGCAGCAAATTTGGTAAAG+AGG | + | chr2_2:14092388-14092407 | Msa0239620:CDS | 35.0% | |
| AGAGCAGATGCATAAAGAAT+TGG | + | chr2_2:14092425-14092444 | Msa0239620:CDS | 35.0% | |
| AATTGGTGGAAATGATTGAG+AGG | + | chr2_2:14092442-14092461 | Msa0239620:CDS | 35.0% | |
| AATGATTGAGAGGATGGAAA+AGG | + | chr2_2:14092452-14092471 | Msa0239620:CDS | 35.0% | |
| TTTCTGAATCAGCGATATGA+GGG | - | chr2_2:14092574-14092593 | None:intergenic | 35.0% | |
| !! | ATCGCTGATTCAGAAACTAT+TGG | + | chr2_2:14092578-14092597 | Msa0239620:CDS | 35.0% |
| !! | TCGCTGATTCAGAAACTATT+GGG | + | chr2_2:14092579-14092598 | Msa0239620:CDS | 35.0% |
| TGTCCAATTCGTCAAAGTAA+GGG | - | chr2_2:14093061-14093080 | None:intergenic | 35.0% | |
| TTGTCCAATTCGTCAAAGTA+AGG | - | chr2_2:14093062-14093081 | None:intergenic | 35.0% | |
| TTCCCTTATGGAAACATTGT+TGG | - | chr2_2:14093135-14093154 | None:intergenic | 35.0% | |
| TGTTTCCATAAGGGAAGAAA+AGG | + | chr2_2:14093139-14093158 | Msa0239620:CDS | 35.0% | |
| GGTAAAAATGAAACAAACGG+CGG | - | chr2_2:14091093-14091112 | None:intergenic | 35.0% | |
| GATAAAAGAAGAACTTACCC+GGG | - | chr2_2:14091381-14091400 | None:intergenic | 35.0% | |
| GGATAAAAGAAGAACTTACC+CGG | - | chr2_2:14091382-14091401 | None:intergenic | 35.0% | |
| GTATCTTGATGAGATAAGAG+TGG | + | chr2_2:14091634-14091653 | Msa0239620:intron | 35.0% | |
| GGTTACAGTACTTTGTATGA+TGG | + | chr2_2:14091701-14091720 | Msa0239620:intron | 35.0% | |
| ! | ATTTGCATTTTCGATCGTTG+TGG | + | chr2_2:14091789-14091808 | Msa0239620:intron | 35.0% |
| ! | CTATGTGCTATTGACAACAT+TGG | + | chr2_2:14092141-14092160 | Msa0239620:intron | 35.0% |
| GGGTTAAACATAAGGTTTGA+TGG | + | chr2_2:14092220-14092239 | Msa0239620:intron | 35.0% | |
| TCATCATTTCAGCTCATCTT+CGG | + | chr2_2:14092281-14092300 | Msa0239620:intron | 35.0% | |
| AATTCAGCTCAAGAAAGAGA+AGG | + | chr2_2:14092337-14092356 | Msa0239620:CDS | 35.0% | |
| ! | GGAAGATTTTGCAGCAAATT+TGG | + | chr2_2:14092380-14092399 | Msa0239620:CDS | 35.0% |
| TTGCAGCAAATTTGGTAAAG+AGG | + | chr2_2:14092388-14092407 | Msa0239620:CDS | 35.0% | |
| AGAGCAGATGCATAAAGAAT+TGG | + | chr2_2:14092425-14092444 | Msa0239620:CDS | 35.0% | |
| AATTGGTGGAAATGATTGAG+AGG | + | chr2_2:14092442-14092461 | Msa0239620:CDS | 35.0% | |
| AATGATTGAGAGGATGGAAA+AGG | + | chr2_2:14092452-14092471 | Msa0239620:CDS | 35.0% | |
| TTTCTGAATCAGCGATATGA+GGG | - | chr2_2:14092574-14092593 | None:intergenic | 35.0% | |
| !! | ATCGCTGATTCAGAAACTAT+TGG | + | chr2_2:14092578-14092597 | Msa0239620:CDS | 35.0% |
| !! | TCGCTGATTCAGAAACTATT+GGG | + | chr2_2:14092579-14092598 | Msa0239620:CDS | 35.0% |
| TGTCCAATTCGTCAAAGTAA+GGG | - | chr2_2:14093061-14093080 | None:intergenic | 35.0% | |
| TTGTCCAATTCGTCAAAGTA+AGG | - | chr2_2:14093062-14093081 | None:intergenic | 35.0% | |
| TTCCCTTATGGAAACATTGT+TGG | - | chr2_2:14093135-14093154 | None:intergenic | 35.0% | |
| TGTTTCCATAAGGGAAGAAA+AGG | + | chr2_2:14093139-14093158 | Msa0239620:CDS | 35.0% | |
| TTTACCATTACCACACACCA+TGG | + | chr2_2:14091107-14091126 | Msa0239620:exon | 40.0% | |
| ! | TTACCCGGGTTTTTGACAAA+GGG | - | chr2_2:14091367-14091386 | None:intergenic | 40.0% |
| ! | TTTTCGATCGTTGTGGAATC+CGG | + | chr2_2:14091796-14091815 | Msa0239620:intron | 40.0% |
| TTTGTAGACTTTCCTGATGG+CGG | + | chr2_2:14091907-14091926 | Msa0239620:intron | 40.0% | |
| GTCAAATAGTCGCTATTGCA+TGG | + | chr2_2:14092082-14092101 | Msa0239620:intron | 40.0% | |
| GCAGATGCATAAAGAATTGG+TGG | + | chr2_2:14092428-14092447 | Msa0239620:CDS | 40.0% | |
| TTGAGAGGATGGAAAAGGAA+AGG | + | chr2_2:14092457-14092476 | Msa0239620:CDS | 40.0% | |
| GGATAAAGAGAGAAGAAGCA+TGG | + | chr2_2:14092478-14092497 | Msa0239620:CDS | 40.0% | |
| GTTTCTGAATCAGCGATATG+AGG | - | chr2_2:14092575-14092594 | None:intergenic | 40.0% | |
| AAGAGAAGAGGATGAAGTTG+AGG | + | chr2_2:14092644-14092663 | Msa0239620:CDS | 40.0% | |
| GAACACAAGTTCGGTCATAT+GGG | + | chr2_2:14092876-14092895 | Msa0239620:CDS | 40.0% | |
| TGGGATCGAAAGGATCAATA+TGG | + | chr2_2:14092895-14092914 | Msa0239620:CDS | 40.0% | |
| GGGATCGAAAGGATCAATAT+GGG | + | chr2_2:14092896-14092915 | Msa0239620:CDS | 40.0% | |
| ATCGAAAGGATCAATATGGG+AGG | + | chr2_2:14092899-14092918 | Msa0239620:CDS | 40.0% | |
| ! | GAAGAAGTGCAAGGAGAAAT+GGG | + | chr2_2:14092965-14092984 | Msa0239620:CDS | 40.0% |
| AAGTACTATAGGAGGACAGT+TGG | + | chr2_2:14092999-14093018 | Msa0239620:CDS | 40.0% | |
| AGTACTATAGGAGGACAGTT+GGG | + | chr2_2:14093000-14093019 | Msa0239620:CDS | 40.0% | |
| !!! | GGGCAAGTTTTGCTATTAAC+AGG | - | chr2_2:14093041-14093060 | None:intergenic | 40.0% |
| TTGCCCTTACTTTGACGAAT+TGG | + | chr2_2:14093055-14093074 | Msa0239620:CDS | 40.0% | |
| TCTGTATAGAAATGGGTCCT+TGG | + | chr2_2:14093082-14093101 | Msa0239620:CDS | 40.0% | |
| TGCATTTCCATTTCTCTCCA+AGG | - | chr2_2:14093102-14093121 | None:intergenic | 40.0% | |
| ATAAGGGAAGAAAAGGAGCA+GGG | + | chr2_2:14093146-14093165 | Msa0239620:CDS | 40.0% | |
| TTTACCATTACCACACACCA+TGG | + | chr2_2:14091107-14091126 | Msa0239620:exon | 40.0% | |
| ! | TTACCCGGGTTTTTGACAAA+GGG | - | chr2_2:14091367-14091386 | None:intergenic | 40.0% |
| ! | TTTTCGATCGTTGTGGAATC+CGG | + | chr2_2:14091796-14091815 | Msa0239620:intron | 40.0% |
| TTTGTAGACTTTCCTGATGG+CGG | + | chr2_2:14091907-14091926 | Msa0239620:intron | 40.0% | |
| GTCAAATAGTCGCTATTGCA+TGG | + | chr2_2:14092082-14092101 | Msa0239620:intron | 40.0% | |
| GCAGATGCATAAAGAATTGG+TGG | + | chr2_2:14092428-14092447 | Msa0239620:CDS | 40.0% | |
| TTGAGAGGATGGAAAAGGAA+AGG | + | chr2_2:14092457-14092476 | Msa0239620:CDS | 40.0% | |
| GGATAAAGAGAGAAGAAGCA+TGG | + | chr2_2:14092478-14092497 | Msa0239620:CDS | 40.0% | |
| GTTTCTGAATCAGCGATATG+AGG | - | chr2_2:14092575-14092594 | None:intergenic | 40.0% | |
| AAGAGAAGAGGATGAAGTTG+AGG | + | chr2_2:14092644-14092663 | Msa0239620:CDS | 40.0% | |
| GAACACAAGTTCGGTCATAT+GGG | + | chr2_2:14092876-14092895 | Msa0239620:CDS | 40.0% | |
| TGGGATCGAAAGGATCAATA+TGG | + | chr2_2:14092895-14092914 | Msa0239620:CDS | 40.0% | |
| GGGATCGAAAGGATCAATAT+GGG | + | chr2_2:14092896-14092915 | Msa0239620:CDS | 40.0% | |
| ATCGAAAGGATCAATATGGG+AGG | + | chr2_2:14092899-14092918 | Msa0239620:CDS | 40.0% | |
| ! | GAAGAAGTGCAAGGAGAAAT+GGG | + | chr2_2:14092965-14092984 | Msa0239620:CDS | 40.0% |
| AAGTACTATAGGAGGACAGT+TGG | + | chr2_2:14092999-14093018 | Msa0239620:CDS | 40.0% | |
| AGTACTATAGGAGGACAGTT+GGG | + | chr2_2:14093000-14093019 | Msa0239620:CDS | 40.0% | |
| !!! | GGGCAAGTTTTGCTATTAAC+AGG | - | chr2_2:14093041-14093060 | None:intergenic | 40.0% |
| TTGCCCTTACTTTGACGAAT+TGG | + | chr2_2:14093055-14093074 | Msa0239620:CDS | 40.0% | |
| TCTGTATAGAAATGGGTCCT+TGG | + | chr2_2:14093082-14093101 | Msa0239620:CDS | 40.0% | |
| TGCATTTCCATTTCTCTCCA+AGG | - | chr2_2:14093102-14093121 | None:intergenic | 40.0% | |
| ATAAGGGAAGAAAAGGAGCA+GGG | + | chr2_2:14093146-14093165 | Msa0239620:CDS | 40.0% | |
| ! | GTTACTGCCTTACTGGTTAC+TGG | - | chr2_2:14091063-14091082 | None:intergenic | 45.0% |
| !! | TTTTTGGGGATTGTGGTGGT+TGG | - | chr2_2:14091214-14091233 | None:intergenic | 45.0% |
| !! | TGAGTTTTTGGGGATTGTGG+TGG | - | chr2_2:14091218-14091237 | None:intergenic | 45.0% |
| !! | GGATGAGTTTTTGGGGATTG+TGG | - | chr2_2:14091221-14091240 | None:intergenic | 45.0% |
| ! | CTGATGGGGATGAGTTTTTG+GGG | - | chr2_2:14091228-14091247 | None:intergenic | 45.0% |
| ! | CCTGATGGGGATGAGTTTTT+GGG | - | chr2_2:14091229-14091248 | None:intergenic | 45.0% |
| ! | ACCTGATGGGGATGAGTTTT+TGG | - | chr2_2:14091230-14091249 | None:intergenic | 45.0% |
| CTTTATGGAAGGTGGTAGAG+GGG | - | chr2_2:14091301-14091320 | None:intergenic | 45.0% | |
| CCTTTATGGAAGGTGGTAGA+GGG | - | chr2_2:14091302-14091321 | None:intergenic | 45.0% | |
| ACCTTTATGGAAGGTGGTAG+AGG | - | chr2_2:14091303-14091322 | None:intergenic | 45.0% | |
| TTGCCCCTTTGTCAAAAACC+CGG | + | chr2_2:14091360-14091379 | Msa0239620:CDS | 45.0% | |
| ! | TACCCGGGTTTTTGACAAAG+GGG | - | chr2_2:14091366-14091385 | None:intergenic | 45.0% |
| ! | CTTACCCGGGTTTTTGACAA+AGG | - | chr2_2:14091368-14091387 | None:intergenic | 45.0% |
| TTGTAGACTTTCCTGATGGC+GGG | + | chr2_2:14091908-14091927 | Msa0239620:intron | 45.0% | |
| GAGAAAGAGTTCGAGAAAGC+TGG | + | chr2_2:14092359-14092378 | Msa0239620:CDS | 45.0% | |
| GGTGGAAATGATTGAGAGGA+TGG | + | chr2_2:14092446-14092465 | Msa0239620:CDS | 45.0% | |
| GGAGATGGAGAGAATTAAGC+AGG | + | chr2_2:14092509-14092528 | Msa0239620:CDS | 45.0% | |
| AGGAAGCGGAATAAGAGAAG+AGG | + | chr2_2:14092632-14092651 | Msa0239620:CDS | 45.0% | |
| !! | CTAGCCTTAATCCAGTACGT+GGG | + | chr2_2:14092744-14092763 | Msa0239620:CDS | 45.0% |
| ! | TAGCCTTAATCCAGTACGTG+GGG | + | chr2_2:14092745-14092764 | Msa0239620:CDS | 45.0% |
| ! | TTGTTATTGCTCACCTCAGC+CGG | - | chr2_2:14092771-14092790 | None:intergenic | 45.0% |
| GCGATCCAAGTAACAGTAGA+TGG | + | chr2_2:14092808-14092827 | Msa0239620:CDS | 45.0% | |
| TCTGGCCATCTACTGTTACT+TGG | - | chr2_2:14092816-14092835 | None:intergenic | 45.0% | |
| AGCGCTTGTACTTCAACATC+TGG | - | chr2_2:14092834-14092853 | None:intergenic | 45.0% | |
| CATAGCAGTAAGAACCGCAT+TGG | + | chr2_2:14092854-14092873 | Msa0239620:CDS | 45.0% | |
| ACCGCATTGGAACACAAGTT+CGG | + | chr2_2:14092867-14092886 | Msa0239620:CDS | 45.0% | |
| ACCGAACTTGTGTTCCAATG+CGG | - | chr2_2:14092871-14092890 | None:intergenic | 45.0% | |
| GGAACACAAGTTCGGTCATA+TGG | + | chr2_2:14092875-14092894 | Msa0239620:CDS | 45.0% | |
| TTCGGTCATATGGGATCGAA+AGG | + | chr2_2:14092885-14092904 | Msa0239620:CDS | 45.0% | |
| TCAATATGGGAGGAGATAGC+TGG | + | chr2_2:14092909-14092928 | Msa0239620:CDS | 45.0% | |
| ! | CGAAGAAGTGCAAGGAGAAA+TGG | + | chr2_2:14092964-14092983 | Msa0239620:CDS | 45.0% |
| AATGGGTCCTTGGAGAGAAA+TGG | + | chr2_2:14093092-14093111 | Msa0239620:CDS | 45.0% | |
| ! | CTGCTCCTTTTCTTCCCTTA+TGG | - | chr2_2:14093147-14093166 | None:intergenic | 45.0% |
| CATAAGGGAAGAAAAGGAGC+AGG | + | chr2_2:14093145-14093164 | Msa0239620:CDS | 45.0% | |
| ! | GTTACTGCCTTACTGGTTAC+TGG | - | chr2_2:14091063-14091082 | None:intergenic | 45.0% |
| !! | TTTTTGGGGATTGTGGTGGT+TGG | - | chr2_2:14091214-14091233 | None:intergenic | 45.0% |
| !! | TGAGTTTTTGGGGATTGTGG+TGG | - | chr2_2:14091218-14091237 | None:intergenic | 45.0% |
| !! | GGATGAGTTTTTGGGGATTG+TGG | - | chr2_2:14091221-14091240 | None:intergenic | 45.0% |
| ! | CTGATGGGGATGAGTTTTTG+GGG | - | chr2_2:14091228-14091247 | None:intergenic | 45.0% |
| ! | CCTGATGGGGATGAGTTTTT+GGG | - | chr2_2:14091229-14091248 | None:intergenic | 45.0% |
| ! | ACCTGATGGGGATGAGTTTT+TGG | - | chr2_2:14091230-14091249 | None:intergenic | 45.0% |
| CTTTATGGAAGGTGGTAGAG+GGG | - | chr2_2:14091301-14091320 | None:intergenic | 45.0% | |
| CCTTTATGGAAGGTGGTAGA+GGG | - | chr2_2:14091302-14091321 | None:intergenic | 45.0% | |
| ACCTTTATGGAAGGTGGTAG+AGG | - | chr2_2:14091303-14091322 | None:intergenic | 45.0% | |
| TTGCCCCTTTGTCAAAAACC+CGG | + | chr2_2:14091360-14091379 | Msa0239620:CDS | 45.0% | |
| ! | TACCCGGGTTTTTGACAAAG+GGG | - | chr2_2:14091366-14091385 | None:intergenic | 45.0% |
| ! | CTTACCCGGGTTTTTGACAA+AGG | - | chr2_2:14091368-14091387 | None:intergenic | 45.0% |
| TTGTAGACTTTCCTGATGGC+GGG | + | chr2_2:14091908-14091927 | Msa0239620:intron | 45.0% | |
| GAGAAAGAGTTCGAGAAAGC+TGG | + | chr2_2:14092359-14092378 | Msa0239620:CDS | 45.0% | |
| GGTGGAAATGATTGAGAGGA+TGG | + | chr2_2:14092446-14092465 | Msa0239620:CDS | 45.0% | |
| GGAGATGGAGAGAATTAAGC+AGG | + | chr2_2:14092509-14092528 | Msa0239620:CDS | 45.0% | |
| AGGAAGCGGAATAAGAGAAG+AGG | + | chr2_2:14092632-14092651 | Msa0239620:CDS | 45.0% | |
| !! | CTAGCCTTAATCCAGTACGT+GGG | + | chr2_2:14092744-14092763 | Msa0239620:CDS | 45.0% |
| ! | TAGCCTTAATCCAGTACGTG+GGG | + | chr2_2:14092745-14092764 | Msa0239620:CDS | 45.0% |
| ! | TTGTTATTGCTCACCTCAGC+CGG | - | chr2_2:14092771-14092790 | None:intergenic | 45.0% |
| GCGATCCAAGTAACAGTAGA+TGG | + | chr2_2:14092808-14092827 | Msa0239620:CDS | 45.0% | |
| TCTGGCCATCTACTGTTACT+TGG | - | chr2_2:14092816-14092835 | None:intergenic | 45.0% | |
| AGCGCTTGTACTTCAACATC+TGG | - | chr2_2:14092834-14092853 | None:intergenic | 45.0% | |
| CATAGCAGTAAGAACCGCAT+TGG | + | chr2_2:14092854-14092873 | Msa0239620:CDS | 45.0% | |
| ACCGCATTGGAACACAAGTT+CGG | + | chr2_2:14092867-14092886 | Msa0239620:CDS | 45.0% | |
| ACCGAACTTGTGTTCCAATG+CGG | - | chr2_2:14092871-14092890 | None:intergenic | 45.0% | |
| GGAACACAAGTTCGGTCATA+TGG | + | chr2_2:14092875-14092894 | Msa0239620:CDS | 45.0% | |
| TTCGGTCATATGGGATCGAA+AGG | + | chr2_2:14092885-14092904 | Msa0239620:CDS | 45.0% | |
| TCAATATGGGAGGAGATAGC+TGG | + | chr2_2:14092909-14092928 | Msa0239620:CDS | 45.0% | |
| ! | CGAAGAAGTGCAAGGAGAAA+TGG | + | chr2_2:14092964-14092983 | Msa0239620:CDS | 45.0% |
| AATGGGTCCTTGGAGAGAAA+TGG | + | chr2_2:14093092-14093111 | Msa0239620:CDS | 45.0% | |
| ! | CTGCTCCTTTTCTTCCCTTA+TGG | - | chr2_2:14093147-14093166 | None:intergenic | 45.0% |
| CATAAGGGAAGAAAAGGAGC+AGG | + | chr2_2:14093145-14093164 | Msa0239620:CDS | 45.0% | |
| CTGTCCATGGTGTGTGGTAA+TGG | - | chr2_2:14091114-14091133 | None:intergenic | 50.0% | |
| TTCATGCTGTCCATGGTGTG+TGG | - | chr2_2:14091120-14091139 | None:intergenic | 50.0% | |
| CCCAAAAACTCATCCCCATC+AGG | + | chr2_2:14091226-14091245 | Msa0239620:CDS | 50.0% | |
| CCCTCTACCACCTTCCATAA+AGG | + | chr2_2:14091299-14091318 | Msa0239620:CDS | 50.0% | |
| ACCACCTTCCATAAAGGTCG+AGG | + | chr2_2:14091305-14091324 | Msa0239620:CDS | 50.0% | |
| TCCTCGACCTTTATGGAAGG+TGG | - | chr2_2:14091309-14091328 | None:intergenic | 50.0% | |
| CAAAGAAGAATGACCCGACC+CGG | - | chr2_2:14091343-14091362 | None:intergenic | 50.0% | |
| TGCCCCTTTGTCAAAAACCC+GGG | + | chr2_2:14091361-14091380 | Msa0239620:CDS | 50.0% | |
| ! | TGTAGACTTTCCTGATGGCG+GGG | + | chr2_2:14091909-14091928 | Msa0239620:intron | 50.0% |
| ACGCTGCTATTCGACAACAC+TGG | - | chr2_2:14092017-14092036 | None:intergenic | 50.0% | |
| AGCTCATCTTCGGATGACGT+GGG | + | chr2_2:14092291-14092310 | Msa0239620:intron | 50.0% | |
| CTTATTCCGCTTCCTTCTGC+TGG | - | chr2_2:14092627-14092646 | None:intergenic | 50.0% | |
| CTGGATTAAGGCTAGGCTGT+TGG | - | chr2_2:14092739-14092758 | None:intergenic | 50.0% | |
| CCACGTACTGGATTAAGGCT+AGG | - | chr2_2:14092746-14092765 | None:intergenic | 50.0% | |
| !! | CCTAGCCTTAATCCAGTACG+TGG | + | chr2_2:14092743-14092762 | Msa0239620:CDS | 50.0% |
| !! | GAGATAGCTGGAGCATTGCA+GGG | + | chr2_2:14092921-14092940 | Msa0239620:CDS | 50.0% |
| ! | TCGTTCTGCGAAGAAGTGCA+AGG | + | chr2_2:14092956-14092975 | Msa0239620:CDS | 50.0% |
| TATAGGAGGACAGTTGGGAG+CGG | + | chr2_2:14093005-14093024 | Msa0239620:CDS | 50.0% | |
| CTGTCCATGGTGTGTGGTAA+TGG | - | chr2_2:14091114-14091133 | None:intergenic | 50.0% | |
| TTCATGCTGTCCATGGTGTG+TGG | - | chr2_2:14091120-14091139 | None:intergenic | 50.0% | |
| CCCAAAAACTCATCCCCATC+AGG | + | chr2_2:14091226-14091245 | Msa0239620:CDS | 50.0% | |
| CCCTCTACCACCTTCCATAA+AGG | + | chr2_2:14091299-14091318 | Msa0239620:CDS | 50.0% | |
| ACCACCTTCCATAAAGGTCG+AGG | + | chr2_2:14091305-14091324 | Msa0239620:CDS | 50.0% | |
| TCCTCGACCTTTATGGAAGG+TGG | - | chr2_2:14091309-14091328 | None:intergenic | 50.0% | |
| CAAAGAAGAATGACCCGACC+CGG | - | chr2_2:14091343-14091362 | None:intergenic | 50.0% | |
| TGCCCCTTTGTCAAAAACCC+GGG | + | chr2_2:14091361-14091380 | Msa0239620:CDS | 50.0% | |
| ! | TGTAGACTTTCCTGATGGCG+GGG | + | chr2_2:14091909-14091928 | Msa0239620:intron | 50.0% |
| ACGCTGCTATTCGACAACAC+TGG | - | chr2_2:14092017-14092036 | None:intergenic | 50.0% | |
| AGCTCATCTTCGGATGACGT+GGG | + | chr2_2:14092291-14092310 | Msa0239620:intron | 50.0% | |
| CTTATTCCGCTTCCTTCTGC+TGG | - | chr2_2:14092627-14092646 | None:intergenic | 50.0% | |
| CTGGATTAAGGCTAGGCTGT+TGG | - | chr2_2:14092739-14092758 | None:intergenic | 50.0% | |
| CCACGTACTGGATTAAGGCT+AGG | - | chr2_2:14092746-14092765 | None:intergenic | 50.0% | |
| !! | CCTAGCCTTAATCCAGTACG+TGG | + | chr2_2:14092743-14092762 | Msa0239620:CDS | 50.0% |
| !! | GAGATAGCTGGAGCATTGCA+GGG | + | chr2_2:14092921-14092940 | Msa0239620:CDS | 50.0% |
| ! | TCGTTCTGCGAAGAAGTGCA+AGG | + | chr2_2:14092956-14092975 | Msa0239620:CDS | 50.0% |
| TATAGGAGGACAGTTGGGAG+CGG | + | chr2_2:14093005-14093024 | Msa0239620:CDS | 50.0% | |
| CGTGAGGGTTACTGCCTTAC+TGG | - | chr2_2:14091070-14091089 | None:intergenic | 55.0% | |
| TGAAACAAACGGCGGCGTGA+GGG | - | chr2_2:14091085-14091104 | None:intergenic | 55.0% | |
| ATGAAACAAACGGCGGCGTG+AGG | - | chr2_2:14091086-14091105 | None:intergenic | 55.0% | |
| GAGGAGGTTCATGCTGTCCA+TGG | - | chr2_2:14091127-14091146 | None:intergenic | 55.0% | |
| AAATGGAGCGACATGGTCGG+CGG | - | chr2_2:14091151-14091170 | None:intergenic | 55.0% | |
| GGGAAATGGAGCGACATGGT+CGG | - | chr2_2:14091154-14091173 | None:intergenic | 55.0% | |
| AGTCGGGAAATGGAGCGACA+TGG | - | chr2_2:14091158-14091177 | None:intergenic | 55.0% | |
| AAGATAAGGTCGCCGGAGTC+GGG | - | chr2_2:14091174-14091193 | None:intergenic | 55.0% | |
| GAAGATAAGGTCGCCGGAGT+CGG | - | chr2_2:14091175-14091194 | None:intergenic | 55.0% | |
| GATTGTGGTGGTTGGAGAGG+AGG | - | chr2_2:14091206-14091225 | None:intergenic | 55.0% | |
| TGAGAAGGGAAACCAGGAGG+AGG | - | chr2_2:14091273-14091292 | None:intergenic | 55.0% | |
| TGGTGAGAAGGGAAACCAGG+AGG | - | chr2_2:14091276-14091295 | None:intergenic | 55.0% | |
| GTGTGGTGAGAAGGGAAACC+AGG | - | chr2_2:14091279-14091298 | None:intergenic | 55.0% | |
| ! | GTAGAGGGGTGTGGTGAGAA+GGG | - | chr2_2:14091287-14091306 | None:intergenic | 55.0% |
| GGGTCCTCGACCTTTATGGA+AGG | - | chr2_2:14091312-14091331 | None:intergenic | 55.0% | |
| AGACGGGTCCTCGACCTTTA+TGG | - | chr2_2:14091316-14091335 | None:intergenic | 55.0% | |
| !! | GTAGACTTTCCTGATGGCGG+GGG | + | chr2_2:14091910-14091929 | Msa0239620:intron | 55.0% |
| CAGCTCATCTTCGGATGACG+TGG | + | chr2_2:14092290-14092309 | Msa0239620:intron | 55.0% | |
| ! | AGAAGAAGCATGGAAGCGCG+AGG | + | chr2_2:14092488-14092507 | Msa0239620:CDS | 55.0% |
| GCAGGACGAAGAAGCTAGAG+CGG | + | chr2_2:14092527-14092546 | Msa0239620:CDS | 55.0% | |
| AAGAAGCTAGAGCGGCTGAG+AGG | + | chr2_2:14092535-14092554 | Msa0239620:CDS | 55.0% | |
| CAGATTCCTCCACCAGCAGA+AGG | + | chr2_2:14092612-14092631 | Msa0239620:CDS | 55.0% | |
| ATTCCGCTTCCTTCTGCTGG+TGG | - | chr2_2:14092624-14092643 | None:intergenic | 55.0% | |
| CTTAATCCAGTACGTGGGGC+CGG | + | chr2_2:14092749-14092768 | Msa0239620:CDS | 55.0% | |
| !! | GGAGATAGCTGGAGCATTGC+AGG | + | chr2_2:14092920-14092939 | Msa0239620:CDS | 55.0% |
| CAGTTGGGAGCGGCAAGAAA+CGG | + | chr2_2:14093015-14093034 | Msa0239620:CDS | 55.0% | |
| CGTGAGGGTTACTGCCTTAC+TGG | - | chr2_2:14091070-14091089 | None:intergenic | 55.0% | |
| TGAAACAAACGGCGGCGTGA+GGG | - | chr2_2:14091085-14091104 | None:intergenic | 55.0% | |
| ATGAAACAAACGGCGGCGTG+AGG | - | chr2_2:14091086-14091105 | None:intergenic | 55.0% | |
| GAGGAGGTTCATGCTGTCCA+TGG | - | chr2_2:14091127-14091146 | None:intergenic | 55.0% | |
| AAATGGAGCGACATGGTCGG+CGG | - | chr2_2:14091151-14091170 | None:intergenic | 55.0% | |
| GGGAAATGGAGCGACATGGT+CGG | - | chr2_2:14091154-14091173 | None:intergenic | 55.0% | |
| AGTCGGGAAATGGAGCGACA+TGG | - | chr2_2:14091158-14091177 | None:intergenic | 55.0% | |
| AAGATAAGGTCGCCGGAGTC+GGG | - | chr2_2:14091174-14091193 | None:intergenic | 55.0% | |
| GAAGATAAGGTCGCCGGAGT+CGG | - | chr2_2:14091175-14091194 | None:intergenic | 55.0% | |
| GATTGTGGTGGTTGGAGAGG+AGG | - | chr2_2:14091206-14091225 | None:intergenic | 55.0% | |
| TGAGAAGGGAAACCAGGAGG+AGG | - | chr2_2:14091273-14091292 | None:intergenic | 55.0% | |
| TGGTGAGAAGGGAAACCAGG+AGG | - | chr2_2:14091276-14091295 | None:intergenic | 55.0% | |
| GTGTGGTGAGAAGGGAAACC+AGG | - | chr2_2:14091279-14091298 | None:intergenic | 55.0% | |
| ! | GTAGAGGGGTGTGGTGAGAA+GGG | - | chr2_2:14091287-14091306 | None:intergenic | 55.0% |
| GGGTCCTCGACCTTTATGGA+AGG | - | chr2_2:14091312-14091331 | None:intergenic | 55.0% | |
| AGACGGGTCCTCGACCTTTA+TGG | - | chr2_2:14091316-14091335 | None:intergenic | 55.0% | |
| !! | GTAGACTTTCCTGATGGCGG+GGG | + | chr2_2:14091910-14091929 | Msa0239620:intron | 55.0% |
| CAGCTCATCTTCGGATGACG+TGG | + | chr2_2:14092290-14092309 | Msa0239620:intron | 55.0% | |
| ! | AGAAGAAGCATGGAAGCGCG+AGG | + | chr2_2:14092488-14092507 | Msa0239620:CDS | 55.0% |
| GCAGGACGAAGAAGCTAGAG+CGG | + | chr2_2:14092527-14092546 | Msa0239620:CDS | 55.0% | |
| AAGAAGCTAGAGCGGCTGAG+AGG | + | chr2_2:14092535-14092554 | Msa0239620:CDS | 55.0% | |
| CAGATTCCTCCACCAGCAGA+AGG | + | chr2_2:14092612-14092631 | Msa0239620:CDS | 55.0% | |
| ATTCCGCTTCCTTCTGCTGG+TGG | - | chr2_2:14092624-14092643 | None:intergenic | 55.0% | |
| CTTAATCCAGTACGTGGGGC+CGG | + | chr2_2:14092749-14092768 | Msa0239620:CDS | 55.0% | |
| !! | GGAGATAGCTGGAGCATTGC+AGG | + | chr2_2:14092920-14092939 | Msa0239620:CDS | 55.0% |
| CAGTTGGGAGCGGCAAGAAA+CGG | + | chr2_2:14093015-14093034 | Msa0239620:CDS | 55.0% | |
| GTCGCTCCATTTCCCGACTC+CGG | + | chr2_2:14091159-14091178 | Msa0239620:CDS | 60.0% | |
| GGGGATTGTGGTGGTTGGAG+AGG | - | chr2_2:14091209-14091228 | None:intergenic | 60.0% | |
| GAGGAGGGATGGACCTGATG+GGG | - | chr2_2:14091242-14091261 | None:intergenic | 60.0% | |
| GGAGGAGGGATGGACCTGAT+GGG | - | chr2_2:14091243-14091262 | None:intergenic | 60.0% | |
| AGGAGGAGGGATGGACCTGA+TGG | - | chr2_2:14091244-14091263 | None:intergenic | 60.0% | |
| AAACCAGGAGGAGGAGGAGG+AGG | - | chr2_2:14091264-14091283 | None:intergenic | 60.0% | |
| GAAGGGAAACCAGGAGGAGG+AGG | - | chr2_2:14091270-14091289 | None:intergenic | 60.0% | |
| ! | GGTAGAGGGGTGTGGTGAGA+AGG | - | chr2_2:14091288-14091307 | None:intergenic | 60.0% |
| TGGAAGGTGGTAGAGGGGTG+TGG | - | chr2_2:14091296-14091315 | None:intergenic | 60.0% | |
| ! | GATCTGAAACCCCCGCCATC+AGG | - | chr2_2:14091922-14091941 | None:intergenic | 60.0% |
| ! | AGCATGGAAGCGCGAGGAGA+TGG | + | chr2_2:14092494-14092513 | Msa0239620:CDS | 60.0% |
| CCTCCACCAGCAGAAGGAAG+CGG | + | chr2_2:14092618-14092637 | Msa0239620:CDS | 60.0% | |
| CCACGTTGTGGGTCAAGGGT+GGG | - | chr2_2:14092692-14092711 | None:intergenic | 60.0% | |
| CCACCCTTGACCCACAACGT+GGG | + | chr2_2:14092690-14092709 | Msa0239620:CDS | 60.0% | |
| CACCCTTGACCCACAACGTG+GGG | + | chr2_2:14092691-14092710 | Msa0239620:CDS | 60.0% | |
| GACCCCACGTTGTGGGTCAA+GGG | - | chr2_2:14092696-14092715 | None:intergenic | 60.0% | |
| CTTGACCCACAACGTGGGGT+CGG | + | chr2_2:14092695-14092714 | Msa0239620:CDS | 60.0% | |
| CGGCCCCACGTACTGGATTA+AGG | - | chr2_2:14092751-14092770 | None:intergenic | 60.0% | |
| !! | AGCTGGAGCATTGCAGGGCA+TGG | + | chr2_2:14092926-14092945 | Msa0239620:CDS | 60.0% |
| !! | GCTGGAGCATTGCAGGGCAT+GGG | + | chr2_2:14092927-14092946 | Msa0239620:CDS | 60.0% |
| GTCGCTCCATTTCCCGACTC+CGG | + | chr2_2:14091159-14091178 | Msa0239620:CDS | 60.0% | |
| GGGGATTGTGGTGGTTGGAG+AGG | - | chr2_2:14091209-14091228 | None:intergenic | 60.0% | |
| GAGGAGGGATGGACCTGATG+GGG | - | chr2_2:14091242-14091261 | None:intergenic | 60.0% | |
| GGAGGAGGGATGGACCTGAT+GGG | - | chr2_2:14091243-14091262 | None:intergenic | 60.0% | |
| AGGAGGAGGGATGGACCTGA+TGG | - | chr2_2:14091244-14091263 | None:intergenic | 60.0% | |
| AAACCAGGAGGAGGAGGAGG+AGG | - | chr2_2:14091264-14091283 | None:intergenic | 60.0% | |
| GAAGGGAAACCAGGAGGAGG+AGG | - | chr2_2:14091270-14091289 | None:intergenic | 60.0% | |
| ! | GGTAGAGGGGTGTGGTGAGA+AGG | - | chr2_2:14091288-14091307 | None:intergenic | 60.0% |
| TGGAAGGTGGTAGAGGGGTG+TGG | - | chr2_2:14091296-14091315 | None:intergenic | 60.0% | |
| ! | GATCTGAAACCCCCGCCATC+AGG | - | chr2_2:14091922-14091941 | None:intergenic | 60.0% |
| ! | AGCATGGAAGCGCGAGGAGA+TGG | + | chr2_2:14092494-14092513 | Msa0239620:CDS | 60.0% |
| CCTCCACCAGCAGAAGGAAG+CGG | + | chr2_2:14092618-14092637 | Msa0239620:CDS | 60.0% | |
| CCACGTTGTGGGTCAAGGGT+GGG | - | chr2_2:14092692-14092711 | None:intergenic | 60.0% | |
| CCACCCTTGACCCACAACGT+GGG | + | chr2_2:14092690-14092709 | Msa0239620:CDS | 60.0% | |
| CACCCTTGACCCACAACGTG+GGG | + | chr2_2:14092691-14092710 | Msa0239620:CDS | 60.0% | |
| GACCCCACGTTGTGGGTCAA+GGG | - | chr2_2:14092696-14092715 | None:intergenic | 60.0% | |
| CTTGACCCACAACGTGGGGT+CGG | + | chr2_2:14092695-14092714 | Msa0239620:CDS | 60.0% | |
| CGGCCCCACGTACTGGATTA+AGG | - | chr2_2:14092751-14092770 | None:intergenic | 60.0% | |
| !! | AGCTGGAGCATTGCAGGGCA+TGG | + | chr2_2:14092926-14092945 | Msa0239620:CDS | 60.0% |
| !! | GCTGGAGCATTGCAGGGCAT+GGG | + | chr2_2:14092927-14092946 | Msa0239620:CDS | 60.0% |
| AGGTCGCCGGAGTCGGGAAA+TGG | - | chr2_2:14091168-14091187 | None:intergenic | 65.0% | |
| GGCGGCGAAGATAAGGTCGC+CGG | - | chr2_2:14091181-14091200 | None:intergenic | 65.0% | |
| GGCGACCTTATCTTCGCCGC+CGG | + | chr2_2:14091180-14091199 | Msa0239620:CDS | 65.0% | |
| GTGGTGGTTGGAGAGGAGGC+CGG | - | chr2_2:14091202-14091221 | None:intergenic | 65.0% | |
| AGGAGGAGGAGGAGGAGGGA+TGG | - | chr2_2:14091253-14091272 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | - | chr2_2:14091257-14091276 | None:intergenic | 65.0% | |
| GGGAAACCAGGAGGAGGAGG+AGG | - | chr2_2:14091267-14091286 | None:intergenic | 65.0% | |
| GTCGAGGACCCGTCTCGATC+CGG | + | chr2_2:14091321-14091340 | Msa0239620:CDS | 65.0% | |
| TCGAGGACCCGTCTCGATCC+GGG | + | chr2_2:14091322-14091341 | Msa0239620:CDS | 65.0% | |
| TGACCCGACCCGGATCGAGA+CGG | - | chr2_2:14091333-14091352 | None:intergenic | 65.0% | |
| CCGCTTCCTTCTGCTGGTGG+AGG | - | chr2_2:14092621-14092640 | None:intergenic | 65.0% | |
| CCCACCCTTGACCCACAACG+TGG | + | chr2_2:14092689-14092708 | Msa0239620:CDS | 65.0% | |
| CCCACGTTGTGGGTCAAGGG+TGG | - | chr2_2:14092693-14092712 | None:intergenic | 65.0% | |
| CGACCCCACGTTGTGGGTCA+AGG | - | chr2_2:14092697-14092716 | None:intergenic | 65.0% | |
| CTCAGCCGACCCCACGTTGT+GGG | - | chr2_2:14092703-14092722 | None:intergenic | 65.0% | |
| AGGTCGCCGGAGTCGGGAAA+TGG | - | chr2_2:14091168-14091187 | None:intergenic | 65.0% | |
| GGCGGCGAAGATAAGGTCGC+CGG | - | chr2_2:14091181-14091200 | None:intergenic | 65.0% | |
| GGCGACCTTATCTTCGCCGC+CGG | + | chr2_2:14091180-14091199 | Msa0239620:CDS | 65.0% | |
| GTGGTGGTTGGAGAGGAGGC+CGG | - | chr2_2:14091202-14091221 | None:intergenic | 65.0% | |
| AGGAGGAGGAGGAGGAGGGA+TGG | - | chr2_2:14091253-14091272 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | - | chr2_2:14091257-14091276 | None:intergenic | 65.0% | |
| GGGAAACCAGGAGGAGGAGG+AGG | - | chr2_2:14091267-14091286 | None:intergenic | 65.0% | |
| GTCGAGGACCCGTCTCGATC+CGG | + | chr2_2:14091321-14091340 | Msa0239620:CDS | 65.0% | |
| TCGAGGACCCGTCTCGATCC+GGG | + | chr2_2:14091322-14091341 | Msa0239620:CDS | 65.0% | |
| TGACCCGACCCGGATCGAGA+CGG | - | chr2_2:14091333-14091352 | None:intergenic | 65.0% | |
| CCGCTTCCTTCTGCTGGTGG+AGG | - | chr2_2:14092621-14092640 | None:intergenic | 65.0% | |
| CCCACCCTTGACCCACAACG+TGG | + | chr2_2:14092689-14092708 | Msa0239620:CDS | 65.0% | |
| CCCACGTTGTGGGTCAAGGG+TGG | - | chr2_2:14092693-14092712 | None:intergenic | 65.0% | |
| CGACCCCACGTTGTGGGTCA+AGG | - | chr2_2:14092697-14092716 | None:intergenic | 65.0% | |
| CTCAGCCGACCCCACGTTGT+GGG | - | chr2_2:14092703-14092722 | None:intergenic | 65.0% | |
| GGAGGCCGGCGGCGAAGATA+AGG | - | chr2_2:14091188-14091207 | None:intergenic | 70.0% | |
| GTGGTTGGAGAGGAGGCCGG+CGG | - | chr2_2:14091199-14091218 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr2_2:14091255-14091274 | None:intergenic | 70.0% | |
| CCAGGAGGAGGAGGAGGAGG+AGG | - | chr2_2:14091261-14091280 | None:intergenic | 70.0% | |
| CCTCCTCCTCCTCCTCCTCC+TGG | + | chr2_2:14091255-14091274 | Msa0239620:CDS | 70.0% | |
| GGACCCGTCTCGATCCGGGT+CGG | + | chr2_2:14091326-14091345 | Msa0239620:CDS | 70.0% | |
| GACCCGTCTCGATCCGGGTC+GGG | + | chr2_2:14091327-14091346 | Msa0239620:CDS | 70.0% | |
| GACCCGACCCGGATCGAGAC+GGG | - | chr2_2:14091332-14091351 | None:intergenic | 70.0% | |
| CCTCAGCCGACCCCACGTTG+TGG | - | chr2_2:14092704-14092723 | None:intergenic | 70.0% | |
| CCACAACGTGGGGTCGGCTG+AGG | + | chr2_2:14092701-14092720 | Msa0239620:CDS | 70.0% | |
| GGAGGCCGGCGGCGAAGATA+AGG | - | chr2_2:14091188-14091207 | None:intergenic | 70.0% | |
| GTGGTTGGAGAGGAGGCCGG+CGG | - | chr2_2:14091199-14091218 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | chr2_2:14091255-14091274 | None:intergenic | 70.0% | |
| CCAGGAGGAGGAGGAGGAGG+AGG | - | chr2_2:14091261-14091280 | None:intergenic | 70.0% | |
| CCTCCTCCTCCTCCTCCTCC+TGG | + | chr2_2:14091255-14091274 | Msa0239620:CDS | 70.0% | |
| GGACCCGTCTCGATCCGGGT+CGG | + | chr2_2:14091326-14091345 | Msa0239620:CDS | 70.0% | |
| GACCCGTCTCGATCCGGGTC+GGG | + | chr2_2:14091327-14091346 | Msa0239620:CDS | 70.0% | |
| GACCCGACCCGGATCGAGAC+GGG | - | chr2_2:14091332-14091351 | None:intergenic | 70.0% | |
| CCTCAGCCGACCCCACGTTG+TGG | - | chr2_2:14092704-14092723 | None:intergenic | 70.0% | |
| CCACAACGTGGGGTCGGCTG+AGG | + | chr2_2:14092701-14092720 | Msa0239620:CDS | 70.0% | |
| CGACATGGTCGGCGGCGAGG+AGG | - | chr2_2:14091143-14091162 | None:intergenic | 75.0% | |
| GAGCGACATGGTCGGCGGCG+AGG | - | chr2_2:14091146-14091165 | None:intergenic | 75.0% | |
| CCTCAGCCGGCCCCACGTAC+TGG | - | chr2_2:14092758-14092777 | None:intergenic | 75.0% | |
| CCAGTACGTGGGGCCGGCTG+AGG | + | chr2_2:14092755-14092774 | Msa0239620:CDS | 75.0% | |
| CGACATGGTCGGCGGCGAGG+AGG | - | chr2_2:14091143-14091162 | None:intergenic | 75.0% | |
| GAGCGACATGGTCGGCGGCG+AGG | - | chr2_2:14091146-14091165 | None:intergenic | 75.0% | |
| CCTCAGCCGGCCCCACGTAC+TGG | - | chr2_2:14092758-14092777 | None:intergenic | 75.0% | |
| CCAGTACGTGGGGCCGGCTG+AGG | + | chr2_2:14092755-14092774 | Msa0239620:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 14091060 | 14093330 | 14091060 | ID=Msa0239620;Name=Msa0239620 |
| chr2_2 | mRNA | 14091060 | 14093330 | 14091060 | ID=Msa0239620-mRNA-1;Parent=Msa0239620;Name=Msa0239620-mRNA-1;_AED=0.01;_eAED=0.01;_QI=66|1|1|1|1|1|2|152|380 |
| chr2_2 | exon | 14091060 | 14091382 | 14091060 | ID=Msa0239620-mRNA-1:exon:5870;Parent=Msa0239620-mRNA-1 |
| chr2_2 | exon | 14092293 | 14093330 | 14092293 | ID=Msa0239620-mRNA-1:exon:5871;Parent=Msa0239620-mRNA-1 |
| chr2_2 | five_prime_UTR | 14091060 | 14091125 | 14091060 | ID=Msa0239620-mRNA-1:five_prime_utr;Parent=Msa0239620-mRNA-1 |
| chr2_2 | CDS | 14091126 | 14091382 | 14091126 | ID=Msa0239620-mRNA-1:cds;Parent=Msa0239620-mRNA-1 |
| chr2_2 | CDS | 14092293 | 14093178 | 14092293 | ID=Msa0239620-mRNA-1:cds;Parent=Msa0239620-mRNA-1 |
| chr2_2 | three_prime_UTR | 14093179 | 14093330 | 14093179 | ID=Msa0239620-mRNA-1:three_prime_utr;Parent=Msa0239620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
