AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0197870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0197870 MtrunA17_Chr2g0290691 98.841 604 7 0 1 604 1 604 0.0 1234
Msa0197870 MtrunA17_Chr7g0227331 71.908 477 111 5 131 604 162 618 0.0 689
Msa0197870 MtrunA17_Chr6g0449401 63.585 530 133 6 113 604 172 679 0.0 686
Msa0197870 MtrunA17_Chr8g0335351 68.056 504 139 6 115 604 276 771 0.0 677
Msa0197870 MtrunA17_Chr7g0250631 65.571 517 157 8 99 604 255 761 0.0 677
Msa0197870 MtrunA17_Chr1g0179101 64.626 441 149 6 127 567 394 827 0.0 585
Msa0197870 MtrunA17_Chr7g0266031 62.806 449 160 6 118 566 407 848 0.0 574
Msa0197870 MtrunA17_Chr8g0356291 62.306 451 158 7 159 604 81 524 0.0 565
Msa0197870 MtrunA17_Chr2g0309421 62.084 451 157 8 158 604 131 571 0.0 564
Msa0197870 MtrunA17_Chr3g0080101 57.806 474 186 6 132 604 342 802 0.0 557
Msa0197870 MtrunA17_Chr4g0063311 56.219 402 147 7 179 561 66 457 4.11e-151 444
Msa0197870 MtrunA17_Chr2g0321101 53.927 382 153 6 183 554 66 434 9.84e-136 404
Msa0197870 MtrunA17_Chr2g0285711 47.907 430 178 8 148 561 26 425 3.97e-130 389
Msa0197870 MtrunA17_Chr8g0381091 50.630 397 157 9 179 561 52 423 1.18e-129 388
Msa0197870 MtrunA17_Chr2g0312641 44.417 412 180 10 157 560 49 419 1.22e-112 345
Msa0197870 MtrunA17_Chr8g0369091 43.489 407 178 5 179 584 572 927 3.87e-109 349
Msa0197870 MtrunA17_Chr4g0030361 42.932 382 164 3 179 560 282 609 5.28e-102 323
Msa0197870 MtrunA17_Chr2g0327561 43.702 389 176 3 179 567 601 946 1.29e-98 322
Msa0197870 MtrunA17_Chr8g0338741 40.256 390 181 13 197 567 11 367 2.92e-78 254
Msa0197870 MtrunA17_Chr2g0329011 38.462 364 179 7 201 561 12 333 1.16e-75 246
Msa0197870 MtrunA17_Chr4g0032761 38.814 371 206 8 201 561 10 369 1.51e-74 244
Msa0197870 MtrunA17_Chr7g0234641 35.040 371 209 8 200 562 7 353 2.54e-65 220
Msa0197870 MtrunA17_Chr5g0428981 33.705 359 186 7 206 563 763 1070 2.74e-55 202
Msa0197870 MtrunA17_Chr4g0018201 33.426 359 187 7 206 563 759 1066 3.62e-55 202
Msa0197870 MtrunA17_Chr6g0478601 33.046 348 182 6 203 549 108 405 4.61e-55 195
Msa0197870 MtrunA17_Chr3g0135951 31.785 409 227 12 185 578 73 444 1.09e-54 194
Msa0197870 MtrunA17_Chr1g0153321 30.946 391 214 10 192 570 94 440 1.84e-49 179
Msa0197870 MtrunA17_Chr1g0187581 31.959 388 211 12 192 569 103 447 5.04e-47 173
Msa0197870 MtrunA17_Chr2g0299781 29.584 409 238 11 185 578 92 465 9.95e-46 169
Msa0197870 MtrunA17_Chr1g0183651 30.155 388 217 10 192 569 106 449 1.68e-45 169
Msa0197870 MtrunA17_Chr7g0261491 30.203 394 213 12 192 569 106 453 2.77e-45 169
Msa0197870 MtrunA17_Chr1g0167351 29.897 388 220 11 192 569 96 441 1.49e-44 166
Msa0197870 MtrunA17_Chr1g0167311 29.581 382 210 10 192 563 101 433 2.36e-42 160
Msa0197870 MtrunA17_Chr7g0245031 39.216 153 91 1 201 353 143 293 1.32e-26 113
Msa0197870 MtrunA17_Chr7g0245031 44.144 111 59 2 440 549 301 409 5.19e-20 93.6
Msa0197870 MtrunA17_Chr4g0059751 36.420 162 90 3 201 353 84 241 7.16e-25 107
Msa0197870 MtrunA17_Chr4g0059751 39.286 112 65 2 440 550 249 358 9.73e-21 95.1
Msa0197870 MtrunA17_Chr1g0197721 36.552 145 90 1 206 350 51 193 9.11e-24 105
Msa0197870 MtrunA17_Chr1g0197721 34.783 138 84 3 424 560 202 334 1.70e-13 73.2
Msa0197870 MtrunA17_Chr3g0125381 41.071 112 62 1 434 545 100 207 7.04e-21 91.7
Msa0197870 MtrunA17_Chr3g0125381 32.000 100 66 1 256 355 2 99 8.37e-11 62.4
Msa0197870 MtrunA17_Chr3g0140631 34.211 152 98 1 203 354 34 183 2.18e-19 89.4
Msa0197870 MtrunA17_Chr3g0140631 35.185 108 66 1 437 544 185 288 4.32e-15 76.3
Msa0197870 MtrunA17_Chr2g0286501 35.714 154 89 4 203 355 46 190 5.14e-19 91.7
Msa0197870 MtrunA17_Chr8g0351491 32.099 162 106 2 195 355 5 163 1.69e-18 86.3
Msa0197870 MtrunA17_Chr8g0351491 39.806 103 58 1 443 545 170 268 1.27e-15 77.8
Msa0197870 MtrunA17_Chr7g0272841 30.645 186 116 4 206 386 68 245 6.66e-17 84.3
Msa0197870 MtrunA17_Chr8g0353621 31.646 158 106 1 198 355 2 157 7.79e-17 81.3
Msa0197870 MtrunA17_Chr8g0353621 39.604 101 57 1 443 543 164 260 2.92e-15 76.3
Msa0197870 MtrunA17_Chr2g0284031 29.630 189 119 3 200 388 25 199 1.15e-16 83.2
Msa0197870 MtrunA17_Chr8g0379091 28.302 212 131 4 177 388 4 194 3.86e-16 81.6
Msa0197870 MtrunA17_Chr4g0025671 29.221 154 103 3 203 353 5 155 7.25e-16 81.6
Msa0197870 MtrunA17_Chr1g0190831 29.412 153 104 3 203 353 1 151 1.07e-15 80.5
Msa0197870 MtrunA17_Chr4g0013131 30.573 157 106 1 197 353 3 156 1.07e-15 80.1
Msa0197870 MtrunA17_Chr2g0321841 29.221 154 103 3 203 353 1 151 1.23e-15 80.9
Msa0197870 MtrunA17_Chr3g0107051 30.108 186 116 4 203 388 18 189 3.14e-15 78.6
Msa0197870 MtrunA17_Chr6g0486661 34.884 129 76 4 437 560 909 1034 3.15e-15 79.7
Msa0197870 MtrunA17_Chr5g0432491 32.450 151 100 2 203 353 20 168 1.52e-14 76.3
Msa0197870 MtrunA17_Chr3g0114511 24.409 254 176 5 198 440 24 272 1.73e-14 76.3
Msa0197870 MtrunA17_Chr3g0132591 33.146 178 95 4 212 388 118 272 1.79e-14 76.3
Msa0197870 MtrunA17_Chr1g0173921 26.316 152 110 2 203 353 1 151 2.02e-14 77.0
Msa0197870 MtrunA17_Chr7g0260191 27.451 153 107 3 203 353 1 151 2.51e-14 76.3
Msa0197870 MtrunA17_Chr3g0107011 28.495 186 119 4 203 388 11 182 2.83e-14 75.5
Msa0197870 MtrunA17_Chr2g0302431 30.247 162 111 2 192 353 6 165 3.01e-14 75.5
Msa0197870 MtrunA17_Chr1g0188031 30.189 159 95 4 203 353 17 167 3.23e-14 75.1
Msa0197870 MtrunA17_Chr1g0205421 28.846 156 108 1 197 352 3 155 4.13e-14 75.1
Msa0197870 MtrunA17_Chr7g0258051 26.923 156 108 3 203 355 13 165 4.87e-14 75.5
Msa0197870 MtrunA17_Chr8g0346071 25.616 203 131 4 186 388 2 184 6.69e-14 74.3
Msa0197870 MtrunA17_Chr2g0304111 28.000 150 106 2 204 353 21 168 1.14e-13 73.6
Msa0197870 MtrunA17_Chr1g0200601 32.335 167 101 5 192 354 22 180 1.51e-13 73.6
Msa0197870 MtrunA17_Chr5g0419441 30.201 149 99 3 206 353 239 383 1.60e-13 73.9
Msa0197870 MtrunA17_Chr1g0170551 32.075 106 66 2 443 548 162 261 1.64e-13 74.3
Msa0197870 MtrunA17_Chr1g0170551 30.769 169 109 4 206 373 7 168 4.56e-13 72.8
Msa0197870 MtrunA17_Chr4g0074111 26.486 185 122 3 204 388 16 186 1.75e-13 72.4
Msa0197870 MtrunA17_Chr1g0185221 29.032 155 102 4 203 353 1 151 2.57e-13 72.8
Msa0197870 MtrunA17_Chr1g0202831 31.788 151 89 5 210 353 415 558 4.20e-13 72.8
Msa0197870 MtrunA17_Chr7g0244521 28.947 190 121 5 199 388 5 180 4.40e-13 71.6
Msa0197870 MtrunA17_Chr1g0176421 31.492 181 114 5 206 378 161 339 4.90e-13 72.0
Msa0197870 MtrunA17_Chr1g0203881 32.895 152 96 3 206 353 41 190 5.24e-13 71.6
Msa0197870 MtrunA17_Chr7g0256001 32.515 163 100 5 205 360 140 299 5.63e-13 72.0
Msa0197870 MtrunA17_Chr1g0205931 27.174 184 117 4 194 372 53 224 5.72e-13 72.0
Msa0197870 MtrunA17_Chr4g0074811 33.516 182 109 8 206 378 91 269 6.24e-13 71.6
Msa0197870 MtrunA17_Chr5g0432471 27.815 151 106 2 203 353 9 156 7.22e-13 71.2
Msa0197870 MtrunA17_Chr7g0274941 31.293 147 96 3 206 350 16 159 8.09e-13 69.7
Msa0197870 MtrunA17_Chr1g0166101 30.263 152 103 2 203 353 21 170 9.73e-13 70.5
Msa0197870 MtrunA17_Chr8g0385341 30.719 153 100 3 206 354 30 180 9.99e-13 70.9
Msa0197870 MtrunA17_Chr4g0047191 34.653 101 66 0 253 353 94 194 1.02e-12 70.1
Msa0197870 MtrunA17_Chr5g0428031 26.490 151 109 2 203 353 6 154 1.15e-12 70.5
Msa0197870 MtrunA17_Chr4g0047211 34.653 101 66 0 253 353 89 189 1.28e-12 69.7
Msa0197870 MtrunA17_Chr5g0448721 30.539 167 112 4 206 370 96 260 1.43e-12 70.5
Msa0197870 MtrunA17_Chr8g0346081 25.000 172 122 2 195 366 11 175 1.86e-12 69.7
Msa0197870 MtrunA17_Chr1g0173541 32.075 159 104 4 181 338 28 183 3.35e-12 69.3
Msa0197870 MtrunA17_Chr4g0008561 34.615 104 62 3 443 544 177 276 4.32e-12 69.3
Msa0197870 MtrunA17_Chr5g0441691 30.719 153 100 4 206 354 68 218 5.09e-12 68.6
Msa0197870 MtrunA17_Chr1g0170281 31.373 153 99 4 206 354 118 268 5.39e-12 68.6
Msa0197870 MtrunA17_Chr3g0130151 29.605 152 103 2 204 353 242 391 6.12e-12 68.6
Msa0197870 MtrunA17_Chr8g0386981 29.861 144 97 2 212 353 414 555 9.84e-12 68.2
Msa0197870 MtrunA17_Chr3g0091311 28.846 156 108 2 198 353 4 156 1.02e-11 65.5
Msa0197870 MtrunA17_Chr2g0276831 32.727 165 96 6 210 367 14 170 1.40e-11 66.6
Msa0197870 MtrunA17_Chr1g0188991 26.316 190 125 4 206 394 15 190 1.48e-11 67.4
Msa0197870 MtrunA17_Chr4g0063881 27.152 151 108 1 203 353 8 156 1.48e-11 67.0
Msa0197870 MtrunA17_Chr8g0374701 31.646 158 96 6 201 353 131 281 1.73e-11 67.0
Msa0197870 MtrunA17_Chr0c02g0489761 30.719 153 100 4 206 354 78 228 1.75e-11 67.0
Msa0197870 MtrunA17_Chr2g0284011 28.646 192 119 7 199 388 5 180 1.76e-11 66.6
Msa0197870 MtrunA17_Chr1g0190131 28.082 146 101 2 206 350 9 151 1.84e-11 65.1
Msa0197870 MtrunA17_Chr4g0045261 31.655 139 85 4 201 338 143 272 2.18e-11 66.6
Msa0197870 MtrunA17_Chr8g0384301 29.114 158 108 2 198 353 291 446 2.64e-11 66.6
Msa0197870 MtrunA17_Chr6g0453681 29.139 151 105 2 203 353 16 164 2.71e-11 66.2
Msa0197870 MtrunA17_Chr6g0468751 29.139 151 105 2 203 353 16 164 4.42e-11 65.5
Msa0197870 MtrunA17_Chr4g0000431 29.870 154 104 3 201 353 19 169 4.70e-11 65.9
Msa0197870 MtrunA17_Chr5g0441011 27.815 151 107 1 203 353 10 158 5.09e-11 65.1
Msa0197870 MtrunA17_Chr4g0038501 24.020 204 146 3 206 409 20 214 5.12e-11 66.2
Msa0197870 MtrunA17_Chr2g0299991 28.395 162 109 4 194 353 58 214 6.63e-11 64.3
Msa0197870 MtrunA17_Chr2g0317001 27.027 148 104 2 206 353 15 158 7.06e-11 65.5
Msa0197870 MtrunA17_Chr4g0001331 29.054 148 102 2 206 353 20 164 7.70e-11 64.7
Msa0197870 MtrunA17_Chr5g0444171 30.719 153 100 4 206 354 92 242 7.76e-11 65.1
Msa0197870 MtrunA17_Chr3g0098951 30.065 153 101 5 206 354 84 234 9.96e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0197870 AT5G47750.1 77.368 570 104 9 42 604 35 586 0.0 857
Msa0197870 AT4G26610.1 72.128 531 117 7 80 604 1 506 0.0 759
Msa0197870 AT5G55910.2 74.510 510 100 8 109 604 5 498 0.0 739
Msa0197870 AT5G55910.1 74.510 510 100 8 109 604 5 498 0.0 739
Msa0197870 AT2G44830.2 63.564 505 161 9 115 604 269 765 0.0 643
Msa0197870 AT2G44830.3 63.564 505 161 9 115 604 269 765 0.0 643
Msa0197870 AT2G44830.1 63.564 505 161 9 115 604 269 765 0.0 643
Msa0197870 AT3G27580.2 64.466 515 161 10 103 604 73 578 0.0 623
Msa0197870 AT3G27580.1 64.466 515 161 10 103 604 73 578 0.0 623
Msa0197870 AT5G40030.1 59.722 504 182 10 106 604 12 499 0.0 587
Msa0197870 AT1G79250.1 64.365 449 139 7 172 604 112 555 0.0 572
Msa0197870 AT1G79250.3 64.365 449 139 7 172 604 112 555 0.0 572
Msa0197870 AT1G79250.2 64.365 449 139 7 172 604 112 555 0.0 572
Msa0197870 AT1G79250.4 64.365 449 139 7 172 604 112 555 0.0 572
Msa0197870 AT3G52890.2 56.333 529 192 10 89 604 432 934 0.0 570
Msa0197870 AT3G52890.4 56.333 529 192 10 89 604 432 934 0.0 570
Msa0197870 AT3G52890.1 56.333 529 192 10 89 604 432 934 0.0 570
Msa0197870 AT3G52890.3 56.333 529 192 10 89 604 432 934 0.0 570
Msa0197870 AT5G03640.2 52.996 534 186 9 100 604 429 926 0.0 556
Msa0197870 AT5G03640.1 52.996 534 186 9 100 604 429 926 0.0 556
Msa0197870 AT3G12690.1 67.000 400 114 4 179 578 158 539 0.0 550
Msa0197870 AT3G12690.3 67.000 400 114 4 179 578 158 539 0.0 550
Msa0197870 AT3G12690.2 67.000 400 114 4 179 578 158 539 0.0 550
Msa0197870 AT2G36350.1 57.816 467 180 6 142 604 496 949 0.0 547
Msa0197870 AT1G16440.1 62.700 437 129 9 179 604 86 499 0.0 540
Msa0197870 AT2G26700.1 47.490 478 188 9 161 585 32 499 7.41e-140 417
Msa0197870 AT3G44610.1 56.319 364 133 7 206 554 71 423 2.95e-135 402
Msa0197870 AT2G34650.1 46.993 449 176 12 158 578 12 426 1.43e-128 385
Msa0197870 AT3G14370.1 44.307 404 179 6 181 575 61 427 7.42e-111 341
Msa0197870 AT5G58140.6 45.144 381 158 5 180 560 551 880 9.02e-107 343
Msa0197870 AT5G58140.7 45.144 381 158 5 180 560 551 880 9.02e-107 343
Msa0197870 AT5G58140.5 45.144 381 158 5 180 560 551 880 9.02e-107 343
Msa0197870 AT5G58140.2 45.144 381 158 5 180 560 551 880 9.02e-107 343
Msa0197870 AT5G58140.1 45.144 381 158 5 180 560 551 880 9.02e-107 343
Msa0197870 AT5G58140.3 45.455 374 153 5 180 553 551 873 4.09e-105 338
Msa0197870 AT1G53700.1 43.735 407 180 8 181 577 66 433 1.28e-101 317
Msa0197870 AT3G45780.2 40.640 406 191 4 156 560 612 968 7.81e-92 304
Msa0197870 AT3G45780.1 40.640 406 191 4 156 560 612 968 7.81e-92 304
Msa0197870 AT1G51170.1 39.410 373 185 11 200 561 16 358 3.58e-74 243
Msa0197870 AT4G13000.1 36.412 379 184 11 200 567 14 346 7.23e-68 225
Msa0197870 AT3G20830.1 38.338 373 189 10 201 561 16 359 1.31e-66 223
Msa0197870 AT3G25250.1 34.392 378 191 9 200 561 11 347 2.25e-66 223
Msa0197870 AT1G45160.2 33.967 368 184 7 201 564 665 977 3.14e-53 197
Msa0197870 AT1G45160.1 33.967 368 184 7 201 564 665 977 5.67e-53 196
Msa0197870 AT3G17850.1 34.444 360 178 9 194 549 871 1176 3.10e-52 194
Msa0197870 AT5G62310.1 32.464 345 182 6 206 549 754 1048 2.02e-51 191
Msa0197870 AT1G30640.3 30.846 402 222 12 191 577 12 372 5.51e-51 183
Msa0197870 AT1G30640.2 30.846 402 222 12 191 577 105 465 5.63e-51 185
Msa0197870 AT1G30640.1 30.846 402 222 12 191 577 105 465 5.63e-51 185
Msa0197870 AT4G33080.2 29.665 418 240 12 174 573 59 440 2.28e-50 182
Msa0197870 AT4G33080.1 29.665 418 240 12 174 573 59 440 2.88e-50 182
Msa0197870 AT5G09890.2 31.392 395 219 10 192 575 88 441 9.75e-48 175
Msa0197870 AT5G09890.1 31.392 395 219 10 192 575 88 441 9.87e-48 175
Msa0197870 AT2G20470.3 30.946 391 209 11 192 569 110 452 1.07e-46 172
Msa0197870 AT2G20470.2 30.946 391 209 11 192 569 110 452 2.40e-46 172
Msa0197870 AT2G20470.1 30.946 391 209 11 192 569 110 452 2.40e-46 172
Msa0197870 AT3G23310.1 26.957 460 279 9 114 563 28 440 1.81e-45 170
Msa0197870 AT4G14350.2 26.872 454 283 9 115 563 28 437 2.78e-44 166
Msa0197870 AT4G14350.1 26.872 454 283 9 115 563 28 437 2.78e-44 166
Msa0197870 AT4G14350.4 26.872 454 283 9 115 563 28 437 2.78e-44 166
Msa0197870 AT4G14350.3 26.872 454 283 9 115 563 28 437 3.44e-44 166
Msa0197870 AT2G19400.1 30.811 370 217 9 185 549 84 419 1.54e-42 160
Msa0197870 AT1G03920.2 30.319 376 214 9 192 563 10 341 2.73e-42 159
Msa0197870 AT1G03920.1 30.319 376 214 9 192 563 123 454 3.19e-42 160
Msa0197870 AT1G03920.3 30.319 376 214 9 192 563 123 454 3.19e-42 160
Msa0197870 AT5G58140.4 46.565 131 70 0 180 310 551 681 6.67e-32 131
Msa0197870 AT3G08720.1 39.355 155 92 1 199 353 133 285 2.67e-27 115
Msa0197870 AT3G08720.1 37.037 162 97 4 438 597 291 449 1.45e-24 107
Msa0197870 AT3G08720.3 39.355 155 92 1 199 353 133 285 2.67e-27 115
Msa0197870 AT3G08720.3 37.037 162 97 4 438 597 291 449 1.45e-24 107
Msa0197870 AT3G08720.4 39.355 155 92 1 199 353 133 285 2.67e-27 115
Msa0197870 AT3G08720.4 37.037 162 97 4 438 597 291 449 1.45e-24 107
Msa0197870 AT3G08720.2 39.355 155 92 1 199 353 133 285 2.67e-27 115
Msa0197870 AT3G08720.2 37.037 162 97 4 438 597 291 449 1.45e-24 107
Msa0197870 AT3G08730.1 38.710 155 93 1 199 353 127 279 9.01e-27 114
Msa0197870 AT3G08730.1 46.903 113 56 3 438 549 285 394 8.95e-25 108
Msa0197870 AT3G08730.2 38.710 155 93 1 199 353 127 279 9.01e-27 114
Msa0197870 AT3G08730.2 46.903 113 56 3 438 549 285 394 8.95e-25 108
Msa0197870 AT1G48490.3 42.222 135 71 3 421 549 983 1116 3.69e-25 111
Msa0197870 AT1G48490.3 36.250 160 99 2 194 353 817 973 2.40e-24 108
Msa0197870 AT1G48490.2 42.222 135 71 3 421 549 983 1116 3.69e-25 111
Msa0197870 AT1G48490.2 36.250 160 99 2 194 353 817 973 2.40e-24 108
Msa0197870 AT1G48490.1 42.222 135 71 3 421 549 983 1116 3.69e-25 111
Msa0197870 AT1G48490.1 36.250 160 99 2 194 353 817 973 2.40e-24 108
Msa0197870 AT1G48490.4 42.222 135 71 3 421 549 984 1117 3.69e-25 111
Msa0197870 AT1G48490.4 36.250 160 99 2 194 353 818 974 2.38e-24 108
Msa0197870 AT5G18700.1 38.411 151 85 3 203 353 1 143 4.02e-23 105
Msa0197870 AT5G04510.2 35.172 145 92 1 206 350 44 186 4.86e-23 102
Msa0197870 AT5G04510.2 34.194 155 88 4 424 577 195 336 2.60e-19 90.9
Msa0197870 AT5G04510.3 35.172 145 92 1 206 350 44 186 6.82e-23 100
Msa0197870 AT5G04510.1 35.172 145 92 1 206 350 44 186 7.06e-23 102
Msa0197870 AT5G04510.1 34.416 154 87 4 425 577 196 336 2.46e-19 92.0
Msa0197870 AT3G10540.1 34.483 145 93 1 206 350 45 187 6.03e-22 99.8
Msa0197870 AT3G10540.1 34.416 154 87 4 425 577 197 337 3.27e-19 91.7
Msa0197870 AT2G45490.2 33.987 153 99 2 203 355 19 169 6.61e-19 87.0
Msa0197870 AT2G45490.2 40.506 79 47 0 443 521 176 254 6.04e-12 66.6
Msa0197870 AT2G45490.1 33.987 153 99 2 203 355 19 169 7.63e-19 87.8
Msa0197870 AT2G45490.1 41.176 102 56 1 443 544 176 273 2.05e-17 83.6
Msa0197870 AT2G20050.1 40.517 116 63 4 440 552 934 1046 2.28e-18 90.1
Msa0197870 AT2G20050.2 40.517 116 63 4 440 552 931 1043 2.33e-18 90.1
Msa0197870 AT1G12680.1 34.416 154 91 3 210 362 111 255 4.24e-18 87.8
Msa0197870 AT3G61960.1 25.215 349 167 12 203 544 7 268 6.44e-18 88.2
Msa0197870 AT3G61960.2 25.223 337 162 11 203 532 7 260 9.51e-18 87.4
Msa0197870 AT3G06030.1 32.039 206 115 7 187 386 59 245 1.88e-17 86.7
Msa0197870 AT2G25880.1 33.557 149 97 1 206 354 25 171 2.08e-17 83.6
Msa0197870 AT2G25880.1 37.963 108 63 1 437 544 173 276 4.90e-16 79.3
Msa0197870 AT4G18700.1 29.381 194 123 3 195 388 15 194 2.38e-17 85.9
Msa0197870 AT2G25880.4 33.557 149 97 1 206 354 38 184 3.27e-17 83.2
Msa0197870 AT2G25880.4 37.963 108 63 1 437 544 186 289 5.32e-16 79.7
Msa0197870 AT4G32830.1 34.211 152 98 1 203 354 28 177 4.63e-17 82.4
Msa0197870 AT4G32830.1 36.111 108 65 1 437 544 179 282 3.71e-15 77.0
Msa0197870 AT1G29230.1 28.866 194 124 3 195 388 63 242 5.79e-17 84.7
Msa0197870 AT2G25880.3 33.557 149 97 1 206 354 86 232 6.32e-17 83.2
Msa0197870 AT2G25880.3 38.318 107 62 1 437 543 234 336 1.23e-15 79.3
Msa0197870 AT5G45810.1 28.571 189 121 3 200 388 22 196 8.55e-17 84.0
Msa0197870 AT2G25880.2 37.963 108 63 1 437 544 141 244 2.89e-16 79.3
Msa0197870 AT3G04810.2 29.412 153 104 3 203 353 1 151 6.14e-16 81.6
Msa0197870 AT3G04810.1 29.412 153 104 3 203 353 1 151 6.14e-16 81.6
Msa0197870 AT3G04810.3 29.412 153 104 3 203 353 1 151 6.14e-16 81.6
Msa0197870 AT1G09000.2 29.570 186 118 4 206 386 69 246 7.25e-16 81.6
Msa0197870 AT1G09000.1 29.570 186 118 4 206 386 69 246 7.26e-16 81.6
Msa0197870 AT1G54960.1 31.351 185 108 6 194 372 66 237 7.62e-16 81.6
Msa0197870 AT1G54960.2 31.351 185 108 6 194 372 66 237 7.62e-16 81.6
Msa0197870 AT1G35670.1 34.132 167 98 5 192 354 18 176 1.76e-15 79.7
Msa0197870 AT3G44200.2 29.032 155 102 4 203 353 5 155 3.69e-15 79.7
Msa0197870 AT3G44200.1 29.032 155 102 4 203 353 5 155 3.69e-15 79.7
Msa0197870 AT5G57630.2 29.936 157 103 3 199 353 5 156 5.76e-15 77.8
Msa0197870 AT1G54510.4 30.323 155 100 4 203 353 1 151 5.86e-15 78.6
Msa0197870 AT1G54510.2 30.323 155 100 4 203 353 1 151 5.86e-15 78.6
Msa0197870 AT1G54510.1 30.323 155 100 4 203 353 1 151 5.86e-15 78.6
Msa0197870 AT1G54510.3 30.323 155 100 4 203 353 1 151 5.86e-15 78.6
Msa0197870 AT5G28290.1 29.412 153 104 3 203 353 1 151 6.89e-15 78.2
Msa0197870 AT5G28290.2 29.412 153 104 3 203 353 1 151 6.89e-15 78.2
Msa0197870 AT5G28290.3 29.412 153 104 3 203 353 1 151 7.15e-15 78.2
Msa0197870 AT5G10930.1 29.787 188 115 7 203 388 9 181 7.34e-15 77.8
Msa0197870 AT5G57630.1 29.936 157 103 3 199 353 5 156 7.42e-15 77.4
Msa0197870 AT2G30360.1 31.579 152 101 2 203 353 18 167 1.08e-14 77.0
Msa0197870 AT3G63280.2 27.451 153 107 3 203 353 1 151 1.20e-14 77.4
Msa0197870 AT3G63280.3 27.451 153 107 3 203 353 1 151 1.20e-14 77.4
Msa0197870 AT3G63280.1 27.451 153 107 3 203 353 1 151 1.20e-14 77.4
Msa0197870 AT2G34180.1 27.835 194 126 3 195 388 46 225 2.67e-14 76.3
Msa0197870 AT3G17510.1 32.450 151 100 2 203 353 17 165 2.79e-14 75.9
Msa0197870 AT3G63280.4 27.451 153 107 3 203 353 55 205 2.83e-14 76.6
Msa0197870 AT4G24400.1 26.829 164 118 2 203 366 6 167 6.94e-14 74.7
Msa0197870 AT4G24400.2 26.829 164 118 2 203 366 6 167 9.05e-14 73.9
Msa0197870 AT2G25090.1 30.000 160 107 4 196 353 5 161 1.01e-13 74.3
Msa0197870 AT3G01090.2 30.464 151 103 2 203 353 39 187 1.90e-13 73.6
Msa0197870 AT3G01090.3 30.464 151 103 2 203 353 16 164 2.03e-13 73.6
Msa0197870 AT3G01090.1 30.464 151 103 2 203 353 16 164 2.03e-13 73.6
Msa0197870 AT4G09570.1 33.117 154 97 4 205 354 24 175 2.57e-13 73.2
Msa0197870 AT1G50240.3 30.460 174 113 4 201 373 1 167 2.59e-13 73.9
Msa0197870 AT1G50240.3 33.981 103 62 2 443 545 161 257 4.89e-13 73.2
Msa0197870 AT1G50240.2 30.460 174 113 4 201 373 1 167 2.59e-13 73.9
Msa0197870 AT1G50240.2 33.981 103 62 2 443 545 161 257 4.89e-13 73.2
Msa0197870 AT3G23000.1 29.375 160 94 4 203 353 22 171 2.73e-13 72.8
Msa0197870 AT2G46700.1 34.921 126 77 3 232 353 172 296 3.23e-13 73.2
Msa0197870 AT2G35890.2 26.860 242 164 7 127 360 50 286 3.27e-13 72.8
Msa0197870 AT2G35890.1 26.860 242 164 7 127 360 50 286 3.27e-13 72.8
Msa0197870 AT5G25110.1 26.344 186 123 4 203 388 40 211 3.49e-13 72.8
Msa0197870 AT4G14580.1 30.769 156 105 3 199 353 14 167 3.51e-13 72.4
Msa0197870 AT5G21326.1 30.464 151 103 2 203 353 10 158 4.51e-13 72.0
Msa0197870 AT5G45820.1 29.299 157 108 2 197 353 3 156 4.67e-13 72.0
Msa0197870 AT1G50700.3 33.333 153 96 4 206 354 73 223 5.88e-13 72.0
Msa0197870 AT3G29160.3 30.464 151 103 2 203 353 17 165 6.09e-13 71.2
Msa0197870 AT5G01820.1 34.375 160 97 4 196 353 13 166 6.28e-13 71.6
Msa0197870 AT4G26070.4 29.949 197 118 7 172 353 20 211 8.07e-13 70.5
Msa0197870 AT4G26070.1 31.481 162 104 5 194 353 56 212 8.86e-13 70.1
Msa0197870 AT1G50700.1 33.987 153 95 5 206 354 73 223 9.78e-13 71.2
Msa0197870 AT3G29160.1 30.464 151 103 2 203 353 17 165 1.02e-12 71.2
Msa0197870 AT3G29160.2 30.464 151 103 2 203 353 17 165 1.02e-12 71.2
Msa0197870 AT3G20410.2 33.333 153 96 5 206 354 91 241 1.02e-12 71.2
Msa0197870 AT3G20410.1 33.333 153 96 5 206 354 91 241 1.02e-12 71.2
Msa0197870 AT4G04720.2 30.719 153 100 3 206 354 80 230 1.14e-12 71.2
Msa0197870 AT4G04720.1 30.719 153 100 3 206 354 80 230 1.14e-12 71.2
Msa0197870 AT1G30270.1 27.152 151 108 1 203 353 28 176 1.18e-12 70.9
Msa0197870 AT4G26070.2 31.481 162 104 5 194 353 56 212 1.20e-12 70.1
Msa0197870 AT4G26070.3 31.481 162 104 5 194 353 56 212 1.20e-12 70.1
Msa0197870 AT4G26070.5 31.481 162 104 5 194 353 43 199 1.21e-12 70.1
Msa0197870 AT1G50700.2 33.987 153 95 5 206 354 73 223 1.54e-12 70.9
Msa0197870 AT1G30270.2 27.152 151 108 1 203 353 28 176 1.92e-12 70.1
Msa0197870 AT2G41860.1 32.026 153 98 4 206 354 54 204 1.92e-12 70.5
Msa0197870 AT2G41860.2 32.026 153 98 4 206 354 54 204 1.92e-12 70.5
Msa0197870 AT2G38490.1 33.766 154 93 4 203 353 25 172 2.46e-12 69.7
Msa0197870 AT2G26980.1 27.815 151 107 2 203 353 11 159 2.46e-12 69.3
Msa0197870 AT2G26980.3 27.815 151 107 2 203 353 11 159 2.46e-12 69.7
Msa0197870 AT2G26980.4 27.815 151 107 2 203 353 21 169 2.67e-12 69.7
Msa0197870 AT3G10660.2 28.395 243 159 6 149 378 124 364 2.73e-12 70.1
Msa0197870 AT3G10660.1 28.395 243 159 6 149 378 124 364 2.73e-12 70.1
Msa0197870 AT5G35410.2 27.815 151 107 2 203 353 8 156 2.90e-12 68.9
Msa0197870 AT4G35310.2 29.940 167 113 4 206 370 97 261 3.18e-12 69.7
Msa0197870 AT4G35310.1 29.940 167 113 4 206 370 97 261 3.18e-12 69.7
Msa0197870 AT1G53570.6 28.049 164 114 2 202 363 210 371 3.29e-12 69.7
Msa0197870 AT1G53570.7 28.049 164 114 2 202 363 210 371 3.30e-12 69.7
Msa0197870 AT4G14480.1 29.530 149 102 2 206 353 15 161 3.47e-12 69.3
Msa0197870 AT5G01810.1 29.897 194 118 6 197 388 3 180 3.91e-12 68.9
Msa0197870 AT5G01810.2 29.897 194 118 6 197 388 3 180 3.91e-12 68.9
Msa0197870 AT1G53570.1 28.049 164 114 2 202 363 210 371 4.10e-12 69.7
Msa0197870 AT5G01810.3 29.897 194 118 6 197 388 3 180 4.10e-12 68.6
Msa0197870 AT1G53570.2 28.049 164 114 2 202 363 210 371 4.51e-12 69.3
Msa0197870 AT1G53570.3 28.049 164 114 2 202 363 210 371 4.51e-12 69.3
Msa0197870 AT1G69220.1 30.201 149 99 3 206 353 249 393 4.52e-12 69.7
Msa0197870 AT1G53570.4 28.049 164 114 2 202 363 210 371 4.55e-12 69.3
Msa0197870 AT2G26980.2 27.815 151 107 2 203 353 11 159 4.59e-12 67.4
Msa0197870 AT2G26980.5 27.815 151 107 2 203 353 11 159 4.96e-12 68.6
Msa0197870 AT5G35410.1 27.815 151 107 2 203 353 8 156 5.64e-12 68.6
Msa0197870 AT4G29810.2 28.436 211 135 6 147 353 25 223 5.74e-12 68.2
Msa0197870 AT4G29810.3 28.436 211 135 6 147 353 25 223 6.16e-12 67.8
Msa0197870 AT5G24430.1 30.573 157 101 4 204 353 141 296 6.37e-12 68.9
Msa0197870 AT3G57530.1 34.328 134 85 3 206 338 63 194 6.40e-12 68.9
Msa0197870 AT3G50310.1 26.768 198 124 6 253 435 48 239 6.46e-12 67.8
Msa0197870 AT4G24100.1 28.931 159 111 1 195 353 22 178 6.46e-12 68.9
Msa0197870 AT2G17290.1 27.830 212 132 6 159 360 39 239 7.00e-12 68.6
Msa0197870 AT2G17290.2 27.830 212 132 6 159 360 39 239 7.00e-12 68.6
Msa0197870 AT4G24100.2 28.931 159 111 1 195 353 22 178 7.17e-12 68.9
Msa0197870 AT1G73500.1 32.298 161 90 6 209 365 50 195 7.82e-12 67.0
Msa0197870 AT4G24100.4 28.931 159 111 1 195 353 38 194 8.49e-12 68.6
Msa0197870 AT4G29810.1 30.539 167 109 4 189 353 53 214 8.82e-12 67.4
Msa0197870 AT4G24100.3 28.931 159 111 1 195 353 38 194 8.95e-12 68.6
Msa0197870 AT5G58380.1 30.282 142 96 2 212 353 18 156 9.92e-12 68.2
Msa0197870 AT3G57530.2 32.680 153 97 4 206 354 63 213 1.01e-11 67.8
Msa0197870 AT5G39440.1 31.126 151 102 2 203 353 16 164 1.09e-11 67.8
Msa0197870 AT5G19360.1 30.719 153 100 4 206 354 68 218 1.28e-11 67.8
Msa0197870 AT3G20860.1 24.503 151 113 1 203 353 1 150 1.38e-11 67.4
Msa0197870 AT5G12180.1 30.719 153 100 4 206 354 73 223 1.68e-11 67.4
Msa0197870 AT1G01140.2 26.347 167 116 3 187 353 5 164 1.71e-11 67.0
Msa0197870 AT1G01140.1 26.347 167 116 3 187 353 5 164 1.73e-11 67.0
Msa0197870 AT1G01140.3 26.347 167 116 3 187 353 5 164 1.77e-11 67.0
Msa0197870 AT2G17890.1 30.405 148 99 2 210 353 112 259 2.01e-11 67.4
Msa0197870 AT2G01820.1 33.529 170 98 7 190 352 574 735 2.04e-11 67.8
Msa0197870 AT5G66210.6 28.758 153 105 2 205 353 61 213 2.59e-11 66.6
Msa0197870 AT5G66210.4 28.758 153 105 2 205 353 61 213 2.59e-11 66.6
Msa0197870 AT4G10730.2 30.201 149 100 3 206 353 27 172 2.60e-11 67.0
Msa0197870 AT5G66210.3 28.758 153 105 2 205 353 61 213 2.75e-11 66.6
Msa0197870 AT4G38230.2 31.250 160 101 5 203 360 56 208 3.04e-11 66.6
Msa0197870 AT4G10010.2 34.437 151 92 5 206 353 156 302 3.11e-11 67.0
Msa0197870 AT4G10730.1 30.201 149 100 3 206 353 47 192 3.38e-11 66.6
Msa0197870 AT2G46700.2 38.318 107 61 3 251 353 10 115 3.51e-11 65.9
Msa0197870 AT2G46700.3 38.318 107 61 3 251 353 10 115 3.51e-11 65.9
Msa0197870 AT4G38230.4 32.051 156 95 5 203 354 26 174 3.52e-11 66.2
Msa0197870 AT4G38230.3 32.051 156 95 5 203 354 26 174 3.52e-11 66.2
Msa0197870 AT5G66210.5 28.758 153 105 2 205 353 61 213 3.64e-11 66.2
Msa0197870 AT5G66210.1 28.758 153 105 2 205 353 61 213 3.89e-11 66.2
Msa0197870 AT5G66210.2 28.758 153 105 2 205 353 61 213 3.89e-11 66.2
Msa0197870 AT1G61950.1 29.508 183 116 6 206 378 98 277 4.45e-11 66.2
Msa0197870 AT3G50530.1 33.600 125 78 3 233 353 178 301 4.95e-11 66.2
Msa0197870 AT1G48260.1 30.464 151 103 2 203 353 8 156 5.43e-11 65.5
Msa0197870 AT3G50530.2 34.400 125 77 3 233 353 178 301 5.45e-11 65.9
Msa0197870 AT1G32320.1 32.192 146 89 3 209 353 51 187 5.62e-11 64.3
Msa0197870 AT3G49370.1 32.800 125 79 3 233 353 172 295 6.14e-11 65.9
Msa0197870 AT3G46930.3 30.667 150 90 6 211 353 206 348 6.26e-11 65.5
Msa0197870 AT5G58950.1 27.966 118 80 2 238 353 243 357 6.70e-11 65.5
Msa0197870 AT3G46930.4 30.667 150 90 6 211 353 206 348 6.89e-11 65.1
Msa0197870 AT3G46930.6 30.667 150 90 6 211 353 110 252 7.91e-11 64.3
Msa0197870 AT4G36070.1 27.451 153 107 2 205 353 70 222 8.31e-11 65.1
Msa0197870 AT3G46930.2 30.667 150 90 6 211 353 206 348 8.61e-11 65.1
Msa0197870 AT4G36070.2 28.378 148 102 2 210 353 75 222 9.63e-11 65.1

Find 196 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCACCCTTGATTATTTC+AGG 0.111224 2_1:+16226577 None:intergenic
TAACCAGTATTCTTTCTTAA+AGG 0.161732 2_1:+16226820 None:intergenic
AATCAGATTGACCAAATTAA+TGG 0.186329 2_1:+16228877 None:intergenic
GTTTGGCAAAACTCCGTTTA+AGG 0.192811 2_1:-16226500 Msa0197870:CDS
TGGGTCTCTCTCTTTCTCTT+TGG 0.209525 2_1:-16230107 Msa0197870:five_prime_UTR
TCTCTATGAGTTCAGTAATT+TGG 0.211516 2_1:+16225784 None:intergenic
GAGGAGGGAAATTGCATATT+TGG 0.239497 2_1:-16225891 Msa0197870:three_prime_UTR
TTGCAGCAAGGGATCTTATC+AGG 0.245422 2_1:-16226402 Msa0197870:CDS
TGATGAAGGAAACATGAATT+AGG 0.247468 2_1:+16230067 None:intergenic
ATGGAAAGTGAAACGTTAAA+AGG 0.255861 2_1:+16230162 None:intergenic
TTGATTGCCAAGTTCGGTTT+TGG 0.277363 2_1:+16226681 None:intergenic
TCTTCTCTCTTGGTAGCTTT+AGG 0.290684 2_1:+16230265 None:intergenic
TTGTCAGAACCTTTCTGATT+AGG 0.293830 2_1:+16226166 None:intergenic
TGGATGCTAAACCATTAATT+TGG 0.294130 2_1:-16228888 Msa0197870:five_prime_UTR
AGCCAGAAAATGTTCTTGTT+AGG 0.303331 2_1:-16226936 Msa0197870:CDS
ACTCCATATCTAAGAGTCTT+AGG 0.307722 2_1:-16225862 Msa0197870:three_prime_UTR
GTTGGCTGTGGTGGACTATT+AGG 0.314694 2_1:+16230311 None:intergenic
AAGCTAACAACAGGTGCTTC+TGG 0.322983 2_1:+16226424 None:intergenic
TTCTCAAACTCAACAGCCTT+TGG 0.340147 2_1:+16226253 None:intergenic
GAGATAAACTTGAAGAGAAA+TGG 0.350052 2_1:+16230143 None:intergenic
AGAGATGGTTCATTGGGTTT+AGG 0.357847 2_1:-16228239 Msa0197870:CDS
CAAACTCAGAGGTACTCTTT+TGG 0.359701 2_1:-16230203 Msa0197870:five_prime_UTR
TGCAGTTACATCTTACTAGA+AGG 0.361236 2_1:+16225829 None:intergenic
GCAGTTGATTGGTGGACTTA+TGG 0.362751 2_1:-16226544 Msa0197870:CDS
CTGAGTAGTAAATTCGGTTC+TGG 0.371104 2_1:-16228590 Msa0197870:CDS
AAACAGTGTGGCTCGGTTCC+CGG 0.372295 2_1:+16226474 None:intergenic
AGACTGGGTTGTGGAGATAT+TGG 0.372630 2_1:-16228197 Msa0197870:CDS
TTTCTATACGAGTTGTTGTT+TGG 0.373039 2_1:-16226517 Msa0197870:CDS
CACCCTCTTTCCTTAACAAC+AGG 0.376035 2_1:+16225639 None:intergenic
GTTGTTTCTGCCGAAGAGTA+TGG 0.382638 2_1:+16227955 None:intergenic
AATGTTCTTGTTAGGGATGA+TGG 0.383801 2_1:-16226928 Msa0197870:CDS
CGCCTCAGGTGTTTGAATCC+CGG 0.388498 2_1:+16228775 None:intergenic
GAGCCTTTAAGAAAGAATAC+TGG 0.390255 2_1:-16226823 Msa0197870:CDS
CGCAAGGCCAAAACCGAACT+TGG 0.393613 2_1:-16226688 Msa0197870:CDS
TCGAGATTAGCCTGTTGTTA+AGG 0.401280 2_1:-16225649 Msa0197870:three_prime_UTR
GCTCGCTCTATGTCGTTTGT+TGG 0.402421 2_1:-16226619 Msa0197870:CDS
GCCAGAAAATGTTCTTGTTA+GGG 0.404235 2_1:-16226935 Msa0197870:CDS
TCCCCAGCTGCATCGTCTGC+TGG 0.405197 2_1:-16226223 Msa0197870:CDS
AACTTGAGGTCTTTCGCCTC+AGG 0.406867 2_1:+16228761 None:intergenic
GGTGGAAAAGTGTGGCGAGG+GGG 0.407131 2_1:-16225620 Msa0197870:three_prime_UTR
TTTGGCAAAACTCCGTTTAA+GGG 0.411556 2_1:-16226499 Msa0197870:CDS
GAGAAGTAGCGTTGAAGTAA+TGG 0.414637 2_1:-16225760 Msa0197870:three_prime_UTR
GATGAAGGAAACATGAATTA+GGG 0.416820 2_1:+16230068 None:intergenic
GAACCTAAGACTCTTAGATA+TGG 0.417190 2_1:+16225859 None:intergenic
AAAACTCCGTTTAAGGGATC+CGG 0.419047 2_1:-16226493 Msa0197870:CDS
ATTTATGAAAGTAAGAAGTA+TGG 0.426877 2_1:-16228647 Msa0197870:CDS
TCAAAATGAGTGTACAAAGT+TGG 0.430217 2_1:+16228029 None:intergenic
AGAACTAGAGATGGTTCATT+GGG 0.431145 2_1:-16228245 Msa0197870:CDS
CAAAATGAGTGTACAAAGTT+GGG 0.433137 2_1:+16228030 None:intergenic
ACTGGGCCTGTTGGCTGTGG+TGG 0.434076 2_1:+16230302 None:intergenic
ACAGAGTTAGACAAATCTTC+AGG 0.435268 2_1:+16228701 None:intergenic
CTCATGTCATTTGCTTTGTG+AGG 0.438367 2_1:+16228290 None:intergenic
GACACTGGGCCTGTTGGCTG+TGG 0.443324 2_1:+16230299 None:intergenic
GTATGGTGTTCCGTCTCAAA+AGG 0.447239 2_1:-16228630 Msa0197870:CDS
TCGCTGTCGCTTCAAAAGAC+AGG 0.447517 2_1:-16228734 Msa0197870:CDS
TGCTCAGGAAAATGCTTCCC+TGG 0.448183 2_1:+16227933 None:intergenic
TGTACAAAGTTGGGAGAAAC+GGG 0.451051 2_1:+16228039 None:intergenic
GATTCACTGAGTAGTAAATT+CGG 0.452525 2_1:-16228596 Msa0197870:CDS
AAACAACATCAGAAAACATC+CGG 0.454715 2_1:-16228794 Msa0197870:CDS
ACTTCGTGCTCGGACGGAAC+GGG 0.455286 2_1:-16228084 Msa0197870:CDS
TAGAACTAGAGATGGTTCAT+TGG 0.455774 2_1:-16228246 Msa0197870:CDS
AGAGAGAGGTTCTTCTCTCT+TGG 0.455953 2_1:+16230255 None:intergenic
CTTCAGACTTCTGAAGAGAC+TGG 0.457642 2_1:-16228213 Msa0197870:CDS
GTGCTACTCACTCGAATTGT+CGG 0.459565 2_1:-16225913 Msa0197870:three_prime_UTR
CATGTTAAAAGAACTGCTAA+TGG 0.460236 2_1:-16225935 Msa0197870:three_prime_UTR
TCAACAGCCTTTGGAATCTC+AGG 0.460268 2_1:+16226262 None:intergenic
ACTGACTTGATTGCCAAGTT+CGG 0.462315 2_1:+16226675 None:intergenic
TCGCCAGCAGACGATGCAGC+TGG 0.463955 2_1:+16226220 None:intergenic
TGGAAAGTGAAACGTTAAAA+GGG 0.467021 2_1:+16230163 None:intergenic
AAAGGGATGTTGTTTAATCT+CGG 0.474175 2_1:+16226327 None:intergenic
TAGCCTGTTGTTAAGGAAAG+AGG 0.474271 2_1:-16225642 Msa0197870:three_prime_UTR
CCTTGATTATTTCAGGTGCC+AGG 0.475279 2_1:+16226584 None:intergenic
GTGTACAAAGTTGGGAGAAA+CGG 0.475511 2_1:+16228038 None:intergenic
AACACGTCAAAGCAGAATAT+CGG 0.476349 2_1:-16228674 Msa0197870:CDS
CAATCGACGAGGATTTAACT+AGG 0.477213 2_1:+16226851 None:intergenic
GACGAGGATTTAACTAGGGT+TGG 0.480552 2_1:+16226856 None:intergenic
AATAGTCCACCACAGCCAAC+AGG 0.484204 2_1:-16230308 Msa0197870:five_prime_UTR
TTACGTGGCAGAGGTTCTAC+TGG 0.484633 2_1:-16227004 Msa0197870:CDS
TATCAGGGGTTTGCTTGTAA+AGG 0.485912 2_1:-16226386 Msa0197870:CDS
CTTCTGAAGAGACTGGGTTG+TGG 0.488392 2_1:-16228206 Msa0197870:CDS
TGCATCGTCTGCTGGCGATA+AGG 0.490225 2_1:-16226215 Msa0197870:CDS
TGTTGTTAGCTTTGCAGCAA+GGG 0.490807 2_1:-16226413 Msa0197870:CDS
CTTGCTGCAAAGCTAACAAC+AGG 0.490974 2_1:+16226415 None:intergenic
CATCTCTAGTTCTAACCACT+TGG 0.491662 2_1:+16228255 None:intergenic
GTCACGGCAGTGCAGTTGAT+TGG 0.492673 2_1:-16226555 Msa0197870:CDS
ACAAAGCAAATGACATGAGA+TGG 0.494288 2_1:-16228286 Msa0197870:CDS
AAAGGAACCTCAGCACAGAT+TGG 0.496667 2_1:-16226368 Msa0197870:CDS
AGGGTGGAAAAGTGTGGCGA+GGG 0.499091 2_1:-16225622 Msa0197870:three_prime_UTR
CGGTTCCCGGATCCCTTAAA+CGG 0.499894 2_1:+16226487 None:intergenic
AACACAGGATGGCTGAATGC+AGG 0.500266 2_1:+16226765 None:intergenic
CGCCAGCAGACGATGCAGCT+GGG 0.501809 2_1:+16226221 None:intergenic
CTTGGTGATGGAATTCTGCC+CGG 0.502089 2_1:-16227988 Msa0197870:CDS
CGACATAGAGCGAGCGTCGG+TGG 0.502191 2_1:+16226627 None:intergenic
CCTGGCACCTGAAATAATCA+AGG 0.503319 2_1:-16226584 Msa0197870:CDS
ACTTGTCTTCGCAATACTGC+TGG 0.510223 2_1:+16228442 None:intergenic
ACATACTTCACTGCCTGCTC+AGG 0.512459 2_1:+16227918 None:intergenic
TTGATTTGCTAGAAAAGAGC+CGG 0.515314 2_1:+16226719 None:intergenic
GTGGGCTCTGCAATGAGCTC+AGG 0.515916 2_1:+16226646 None:intergenic
TACTTCGTGCTCGGACGGAA+CGG 0.519215 2_1:-16228085 Msa0197870:CDS
CGCTGTCGCTTCAAAAGACA+GGG 0.521858 2_1:-16228733 Msa0197870:CDS
CACAGATTGGCTTATAAAAG+AGG 0.523225 2_1:-16226355 Msa0197870:CDS
TAGGCTTTAGAGAGAGACAC+TGG 0.524557 2_1:+16230284 None:intergenic
GACATAGAGCGAGCGTCGGT+GGG 0.525943 2_1:+16226628 None:intergenic
TTTAACAAGAAAGAATGAAA+AGG 0.526114 2_1:+16225959 None:intergenic
CAATGAAAGTGATGGACAAA+GGG 0.527725 2_1:-16228130 Msa0197870:CDS
TGCAGCAAGGGATCTTATCA+GGG 0.528637 2_1:-16226401 Msa0197870:CDS
AGTGAAGTCCCAGACAAAAG+TGG 0.532936 2_1:-16225705 Msa0197870:three_prime_UTR
TTGGTGATGGAATTCTGCCC+GGG 0.536932 2_1:-16227987 Msa0197870:CDS
CTCACTCGAATTGTCGGAGG+AGG 0.537536 2_1:-16225907 Msa0197870:three_prime_UTR
TGGAGTACCTACACATGCTC+GGG 0.541979 2_1:-16226978 Msa0197870:CDS
GGCAGAGGTTCTACTGGCAA+TGG 0.545465 2_1:-16226998 Msa0197870:CDS
GAAGTTACTTCGTGCTCGGA+CGG 0.545817 2_1:-16228090 Msa0197870:CDS
GGGTGGAAAAGTGTGGCGAG+GGG 0.546089 2_1:-16225621 Msa0197870:three_prime_UTR
GTGGAGACCTCCATACTCTT+CGG 0.546582 2_1:-16227965 Msa0197870:CDS
CTGTTGTTAGCTTTGCAGCA+AGG 0.548555 2_1:-16226414 Msa0197870:CDS
AGCAGTATTGCGAAGACAAG+TGG 0.550813 2_1:-16228440 Msa0197870:CDS
TGGTGTAGCACATCGGATCA+AGG 0.554118 2_1:+16226285 None:intergenic
TGATTTGCTAGAAAAGAGCC+GGG 0.554220 2_1:+16226720 None:intergenic
ATGGAGTACCTACACATGCT+CGG 0.560351 2_1:-16226979 Msa0197870:CDS
AAACTCCGTTTAAGGGATCC+GGG 0.560479 2_1:-16226492 Msa0197870:CDS
ACTCTTCGGCAGAAACAACC+AGG 0.561509 2_1:-16227951 Msa0197870:CDS
GTCTCTTCAGAAGTCTGAAG+TGG 0.563517 2_1:+16228216 None:intergenic
TGTTGGAACTCATGAATACC+TGG 0.564894 2_1:-16226602 Msa0197870:CDS
ACGGCAGTGCAGTTGATTGG+TGG 0.566518 2_1:-16226552 Msa0197870:CDS
TCTAGAAGAAATCAAACTCC+AGG 0.567164 2_1:+16226140 None:intergenic
GAGAGAGACACTGGGCCTGT+TGG 0.567426 2_1:+16230293 None:intergenic
AAGGAGGAAAATGAAAGTGA+TGG 0.570674 2_1:+16230023 None:intergenic
TTCAGACTTCTGAAGAGACT+GGG 0.571581 2_1:-16228212 Msa0197870:CDS
TTATAAGCCAATCTGTGCTG+AGG 0.571793 2_1:+16226361 None:intergenic
GCAGACGATGCAGCTGGGGA+AGG 0.572018 2_1:+16226226 None:intergenic
AGAGTATGGAGGTCTCCACC+CGG 0.575060 2_1:+16227969 None:intergenic
CAAAGCAAATGACATGAGAT+GGG 0.575298 2_1:-16228285 Msa0197870:CDS
TCAACAACTCCTAATCAGAA+AGG 0.579889 2_1:-16226175 Msa0197870:CDS
GGAAAGAGGGTGGAAAAGTG+TGG 0.581120 2_1:-16225628 Msa0197870:three_prime_UTR
CACTCTCAACAAAATCAGCT+CGG 0.581324 2_1:+16228399 None:intergenic
TCTGCAATGAGCTCAGGTAG+AGG 0.583676 2_1:+16226652 None:intergenic
CACATTAACAACGGATGAGG+AGG 0.583759 2_1:+16228565 None:intergenic
AGCCTGTTGTTAAGGAAAGA+GGG 0.585013 2_1:-16225641 Msa0197870:three_prime_UTR
GAAAGGTTCTGACAATTACC+TGG 0.585823 2_1:-16226158 Msa0197870:CDS
TATGGTGTTCCGTCTCAAAA+GGG 0.589404 2_1:-16228629 Msa0197870:CDS
TTGGACTAACAGCACATCGA+AGG 0.590565 2_1:+16226875 None:intergenic
ATAATCAAGGGTGAAGGTCA+CGG 0.590685 2_1:-16226571 Msa0197870:CDS
TTACTTCGCAATGAAAGTGA+TGG 0.590768 2_1:-16228138 Msa0197870:CDS
TTCTGATTCTTCAAACTCAG+AGG 0.598138 2_1:-16230214 Msa0197870:five_prime_UTR
AATCGACGAGGATTTAACTA+GGG 0.601531 2_1:+16226852 None:intergenic
TCGAAGGGAAAGGTCAAAGT+CGG 0.601750 2_1:+16226891 None:intergenic
GAGGGTGGAAAAGTGTGGCG+AGG 0.603187 2_1:-16225623 Msa0197870:three_prime_UTR
GCAATGAAAGTGATGGACAA+AGG 0.604126 2_1:-16228131 Msa0197870:CDS
CAAGTGGTTAGAACTAGAGA+TGG 0.606500 2_1:-16228254 Msa0197870:CDS
GTAAGAAGTTACTTCGTGCT+CGG 0.606725 2_1:-16228094 Msa0197870:CDS
CAAATCAAAGAAAGAACGCA+AGG 0.607512 2_1:-16226704 Msa0197870:CDS
TAACAGCACATCGAAGGGAA+AGG 0.614273 2_1:+16226881 None:intergenic
GCCAGCAGACGATGCAGCTG+GGG 0.614968 2_1:+16226222 None:intergenic
GATGGCGGCTCAATACATGC+AGG 0.614996 2_1:+16226787 None:intergenic
CCACGTTAAACAGTGTGGCT+CGG 0.619994 2_1:+16226467 None:intergenic
GTTTCAAGGAACAGATGATG+AGG 0.620407 2_1:-16226040 Msa0197870:three_prime_UTR
GTTTCTGCGAAAGCTAGCGA+TGG 0.621392 2_1:-16228467 Msa0197870:CDS
GATTAGGAGTTGTTGACATG+TGG 0.625031 2_1:+16226182 None:intergenic
ACAGCCTTTGGAATCTCAGG+TGG 0.625096 2_1:+16226265 None:intergenic
GATGGCTGAATGCAGGATGG+CGG 0.628761 2_1:+16226772 None:intergenic
GTTCACATTAACAACGGATG+AGG 0.630739 2_1:+16228562 None:intergenic
GCAGCAAGGGATCTTATCAG+GGG 0.631769 2_1:-16226400 Msa0197870:CDS
TCCGTTGTTAATGTGAACAC+AGG 0.632113 2_1:-16228557 Msa0197870:CDS
AACAACATCAGAAAACATCC+GGG 0.634932 2_1:-16228793 Msa0197870:CDS
CCTGAAATAATCAAGGGTGA+AGG 0.637156 2_1:-16226577 Msa0197870:CDS
TGGACTAACAGCACATCGAA+GGG 0.637289 2_1:+16226876 None:intergenic
GAGTATGGAGGTCTCCACCC+GGG 0.638079 2_1:+16227970 None:intergenic
CAGGATGGCTGAATGCAGGA+TGG 0.639669 2_1:+16226769 None:intergenic
AGGCTTTAGAGAGAGACACT+GGG 0.639683 2_1:+16230285 None:intergenic
GTTTCTGCCGAAGAGTATGG+AGG 0.641137 2_1:+16227958 None:intergenic
ACATGAGGTAGGAGCAACAC+AGG 0.641339 2_1:+16226750 None:intergenic
ATACAATCCCGAGCATGTGT+AGG 0.645724 2_1:+16226971 None:intergenic
TCACTCGAATTGTCGGAGGA+GGG 0.645953 2_1:-16225906 Msa0197870:three_prime_UTR
GTTTACTTATCTGAGTTGAG+TGG 0.646542 2_1:-16228170 Msa0197870:CDS
GAGGTAGGAGCAACACAGGA+TGG 0.647072 2_1:+16226754 None:intergenic
GGTAAGAGCAGTATTTGCAG+AGG 0.647607 2_1:-16228377 Msa0197870:CDS
GCGACAGCGAAGAAAACTTG+AGG 0.651781 2_1:+16228747 None:intergenic
TGTTGACATGTGGTTAACAA+CGG 0.653551 2_1:+16226192 None:intergenic
CTACTCACTCGAATTGTCGG+AGG 0.666247 2_1:-16225910 Msa0197870:three_prime_UTR
CTGGCACCTGAAATAATCAA+GGG 0.668108 2_1:-16226583 Msa0197870:CDS
TCTCAGGTGGTGTAGCACAT+CGG 0.670407 2_1:+16226278 None:intergenic
GCCTGTGTTCACATTAACAA+CGG 0.677022 2_1:+16228556 None:intergenic
GTGATGGAATTCTGCCCGGG+TGG 0.679002 2_1:-16227984 Msa0197870:CDS
TACACCACCTGAGATTCCAA+AGG 0.680244 2_1:-16226269 Msa0197870:CDS
CCGAGCCACACTGTTTAACG+TGG 0.692194 2_1:-16226467 Msa0197870:CDS
ATCCGGGATTCAAACACCTG+AGG 0.694411 2_1:-16228777 Msa0197870:CDS
ACCTACCACGTTAAACAGTG+TGG 0.697166 2_1:+16226462 None:intergenic
GCCACACTGTTTAACGTGGT+AGG 0.711436 2_1:-16226463 Msa0197870:CDS
AAACGACATAGAGCGAGCGT+CGG 0.711674 2_1:+16226624 None:intergenic
CTCTTCGGCAGAAACAACCA+GGG 0.726242 2_1:-16227950 Msa0197870:CDS
ACAAAGTTGGGAGAAACGGG+TGG 0.730084 2_1:+16228042 None:intergenic
GATTTGCTAGAAAAGAGCCG+GGG 0.742700 2_1:+16226721 None:intergenic
CTGTTGTTAAGGAAAGAGGG+TGG 0.745229 2_1:-16225638 Msa0197870:three_prime_UTR
AGGCTCTGAATCAATCGACG+AGG 0.745997 2_1:+16226840 None:intergenic
GAGATGGGAAGCTATCCAAG+TGG 0.758068 2_1:-16228270 Msa0197870:CDS
GGTGCTTCTGGAAATCGCAG+CGG 0.758291 2_1:+16226436 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTAATTGCATTTA+CGG - chr2_1:16226562-16226581 Msa0197870:CDS 10.0%
!!! TATTTTTTAATTGCATTTAC+GGG - chr2_1:16226563-16226582 Msa0197870:CDS 15.0%
!!! AAAATTGATTTTAACATGTT+TGG + chr2_1:16226688-16226707 None:intergenic 15.0%
!!! ATTTTATTGTAGTATTGAAT+TGG - chr2_1:16228209-16228228 Msa0197870:CDS 15.0%
!!! TTTTATTGTAGTATTGAATT+GGG - chr2_1:16228210-16228229 Msa0197870:CDS 15.0%
!!! AAGATGTTAATTTAATTTGA+TGG - chr2_1:16228894-16228913 Msa0197870:five_prime_UTR 15.0%
!!! AACTATTTTTTAATGTTTCA+AGG - chr2_1:16229902-16229921 Msa0197870:intron 15.0%
!! CAAATAGTAACAATTATGAA+GGG + chr2_1:16226029-16226048 None:intergenic 20.0%
!! TCAAATAGTAACAATTATGA+AGG + chr2_1:16226030-16226049 None:intergenic 20.0%
!! AATTATTATTGTTGTCTTGT+TGG - chr2_1:16226131-16226150 Msa0197870:exon 20.0%
!!! GTTGGTTAATTATGTTTTTA+AGG - chr2_1:16226314-16226333 Msa0197870:CDS 20.0%
!!! TGTAGTTTTTGAAAAAATCA+CGG - chr2_1:16226830-16226849 Msa0197870:CDS 20.0%
!! ATTTATGAAAGTAAGAAGTA+TGG - chr2_1:16227309-16227328 Msa0197870:intron 20.0%
!! TAAGTTGCATCATTTATAAT+GGG + chr2_1:16228188-16228207 None:intergenic 20.0%
!! ATAAGTTGCATCATTTATAA+TGG + chr2_1:16228189-16228208 None:intergenic 20.0%
!!! TATTTTGTTTGATTAAGAGT+AGG - chr2_1:16228358-16228377 Msa0197870:CDS 20.0%
!!! ATTTTGTTTGATTAAGAGTA+GGG - chr2_1:16228359-16228378 Msa0197870:CDS 20.0%
!! ATTCAATTGGATATTTAACT+GGG - chr2_1:16228397-16228416 Msa0197870:CDS 20.0%
!!! TATATTGATTGCAAAAAAGA+TGG - chr2_1:16229857-16229876 Msa0197870:intron 20.0%
!!! AATTGTATGTTTGTTTTTGT+TGG - chr2_1:16229939-16229958 Msa0197870:intron 20.0%
!! TTTAACAAGAAAGAATGAAA+AGG + chr2_1:16230000-16230019 None:intergenic 20.0%
! TTGAAGAATCAGAAAAACTT+GGG + chr2_1:16225736-16225755 None:intergenic 25.0%
! TTTGAAGAATCAGAAAAACT+TGG + chr2_1:16225737-16225756 None:intergenic 25.0%
! TAAAAAATGGATCTTGATGA+AGG + chr2_1:16225906-16225925 None:intergenic 25.0%
! TGATGGAAGTGAATAAAAAA+TGG + chr2_1:16225919-16225938 None:intergenic 25.0%
!! AGTAAAAGTATGAGTCAATT+TGG + chr2_1:16225982-16226001 None:intergenic 25.0%
!!! TTCATAGTTGATTTGCTAAA+TGG - chr2_1:16226224-16226243 Msa0197870:CDS 25.0%
!!! TCATAGTTGATTTGCTAAAT+GGG - chr2_1:16226225-16226244 Msa0197870:CDS 25.0%
!!! TACAAGTTTTGTGTTTTAGT+AGG - chr2_1:16226356-16226375 Msa0197870:CDS 25.0%
!!! AATGTGAGCTAATTTTTTGT+TGG - chr2_1:16226424-16226443 Msa0197870:CDS 25.0%
!!! ACAGTTTTTTTTCGTTTGAT+AGG - chr2_1:16227019-16227038 Msa0197870:intron 25.0%
! AATCAGATTGACCAAATTAA+TGG + chr2_1:16227082-16227101 None:intergenic 25.0%
!! AATTCTTTAGCATTTTCTGA+TGG - chr2_1:16227110-16227129 Msa0197870:intron 25.0%
! ACAAGAGTTATCAAAACTAA+TGG + chr2_1:16228103-16228122 None:intergenic 25.0%
! TTATTTGAAAGCCAAATTGA+AGG + chr2_1:16228149-16228168 None:intergenic 25.0%
!! AGTATTGAATTGGGAAAAAA+AGG - chr2_1:16228219-16228238 Msa0197870:CDS 25.0%
!! AAATCATTGCATCTGAAATT+TGG + chr2_1:16228293-16228312 None:intergenic 25.0%
! GATTCAATTGGATATTTAAC+TGG - chr2_1:16228396-16228415 Msa0197870:CDS 25.0%
! AACTCTTTGAATGTGTATAT+TGG - chr2_1:16228439-16228458 Msa0197870:CDS 25.0%
!! AAGAGTTGTTTCAATTATAG+TGG + chr2_1:16228760-16228779 None:intergenic 25.0%
! ACTATAATTGAAACAACTCT+TGG - chr2_1:16228759-16228778 Msa0197870:CDS 25.0%
! CTATAATTGAAACAACTCTT+GGG - chr2_1:16228760-16228779 Msa0197870:CDS 25.0%
! ATCTGTTTAATCTCATTTAC+TGG - chr2_1:16228784-16228803 Msa0197870:CDS 25.0%
! TCTGTTTAATCTCATTTACT+GGG - chr2_1:16228785-16228804 Msa0197870:CDS 25.0%
! CAATCAAAGAAATCATCATT+AGG + chr2_1:16228867-16228886 None:intergenic 25.0%
! TAACCAGTATTCTTTCTTAA+AGG + chr2_1:16229139-16229158 None:intergenic 25.0%
!! AAAAGATGGTTTTCTTTTAG+AGG - chr2_1:16229871-16229890 Msa0197870:intron 25.0%
TGGAAAGTGAAACGTTAAAA+GGG + chr2_1:16225796-16225815 None:intergenic 30.0%
ATGGAAAGTGAAACGTTAAA+AGG + chr2_1:16225797-16225816 None:intergenic 30.0%
GAGATAAACTTGAAGAGAAA+TGG + chr2_1:16225816-16225835 None:intergenic 30.0%
!!! TTATCTCTTTTTTCTGCATC+TGG - chr2_1:16225829-16225848 Msa0197870:three_prime_UTR 30.0%
!!! TATCTCTTTTTTCTGCATCT+GGG - chr2_1:16225830-16225849 Msa0197870:three_prime_UTR 30.0%
GATGAAGGAAACATGAATTA+GGG + chr2_1:16225891-16225910 None:intergenic 30.0%
TGATGAAGGAAACATGAATT+AGG + chr2_1:16225892-16225911 None:intergenic 30.0%
! AAGTGCAGATTTTTACCATA+AGG + chr2_1:16225955-16225974 None:intergenic 30.0%
TTTGATGCTAAGTGTATGTT+TGG - chr2_1:16226461-16226480 Msa0197870:CDS 30.0%
! TACACCTTCAGAATCAATTT+TGG - chr2_1:16226707-16226726 Msa0197870:CDS 30.0%
TTAGAGCTTGAAGAAATTCA+CGG + chr2_1:16226808-16226827 None:intergenic 30.0%
AAAGAAAGACATAGCATGAT+TGG + chr2_1:16226910-16226929 None:intergenic 30.0%
CATGCTATGTCTTTCTTTAA+TGG - chr2_1:16226912-16226931 Msa0197870:CDS 30.0%
TTATTCATACTGCGTTGAAA+TGG - chr2_1:16226993-16227012 Msa0197870:CDS 30.0%
!!! GTTACTTTTGAAGACACAAA+TGG - chr2_1:16227048-16227067 Msa0197870:intron 30.0%
TGGATGCTAAACCATTAATT+TGG - chr2_1:16227068-16227087 Msa0197870:intron 30.0%
AAACAACATCAGAAAACATC+CGG - chr2_1:16227162-16227181 Msa0197870:intron 30.0%
GATTCACTGAGTAGTAAATT+CGG - chr2_1:16227360-16227379 Msa0197870:intron 30.0%
GACAAAAAGACTTCAGAATA+TGG - chr2_1:16227447-16227466 Msa0197870:intron 30.0%
CAAAATGAGTGTACAAAGTT+GGG + chr2_1:16227929-16227948 None:intergenic 30.0%
TCAAAATGAGTGTACAAAGT+TGG + chr2_1:16227930-16227949 None:intergenic 30.0%
!! TTTGTACACTCATTTTGAGA+CGG - chr2_1:16227932-16227951 Msa0197870:CDS 30.0%
ACTAATGGAAGGAAATCAAA+AGG + chr2_1:16228088-16228107 None:intergenic 30.0%
GAGTTATCAAAACTAATGGA+AGG + chr2_1:16228099-16228118 None:intergenic 30.0%
TTTGCTTGAAACCTTCAATT+TGG - chr2_1:16228135-16228154 Msa0197870:CDS 30.0%
AAAAGGTTGTCATGTATTTG+TGG - chr2_1:16228236-16228255 Msa0197870:CDS 30.0%
GCAATGATTTAAACCATGTA+TGG - chr2_1:16228303-16228322 Msa0197870:CDS 30.0%
! GTATATTGGCAATTTTGCAA+TGG - chr2_1:16228453-16228472 Msa0197870:CDS 30.0%
! TATTCTAAGCCTTTGAGAAT+TGG - chr2_1:16228544-16228563 Msa0197870:CDS 30.0%
! ATTCTAAGCCTTTGAGAATT+GGG - chr2_1:16228545-16228564 Msa0197870:CDS 30.0%
! TACAATATTTGACTTCATGC+AGG + chr2_1:16228627-16228646 None:intergenic 30.0%
! GTTTGATATCTGAAATTGCT+TGG + chr2_1:16228656-16228675 None:intergenic 30.0%
! AATCTTTGAAAGCTTGTTTG+TGG - chr2_1:16228706-16228725 Msa0197870:CDS 30.0%
! ATCTTTGAAAGCTTGTTTGT+GGG - chr2_1:16228707-16228726 Msa0197870:CDS 30.0%
! TTTCTATACGAGTTGTTGTT+TGG - chr2_1:16229439-16229458 Msa0197870:intron 30.0%
! AAAGGGATGTTGTTTAATCT+CGG + chr2_1:16229632-16229651 None:intergenic 30.0%
!!! AAACAACATCCCTTTTTTGA+AGG - chr2_1:16229637-16229656 Msa0197870:intron 30.0%
CATGTTAAAAGAACTGCTAA+TGG - chr2_1:16230021-16230040 Msa0197870:five_prime_UTR 30.0%
TCTCTATGAGTTCAGTAATT+TGG + chr2_1:16230175-16230194 None:intergenic 30.0%
TTCTGATTCTTCAAACTCAG+AGG - chr2_1:16225742-16225761 Msa0197870:three_prime_UTR 35.0%
AAGGAGGAAAATGAAAGTGA+TGG + chr2_1:16225936-16225955 None:intergenic 35.0%
! CACTTTCATTTTCCTCCTTA+TGG - chr2_1:16225937-16225956 Msa0197870:three_prime_UTR 35.0%
! TGCAGATTTTTACCATAAGG+AGG + chr2_1:16225952-16225971 None:intergenic 35.0%
CAGTGAACATAACATAACCT+AGG + chr2_1:16226252-16226271 None:intergenic 35.0%
AATATGTTGTGTTGTGTCTG+AGG - chr2_1:16226285-16226304 Msa0197870:CDS 35.0%
ATATGTTGTGTTGTGTCTGA+GGG - chr2_1:16226286-16226305 Msa0197870:CDS 35.0%
AATTAGCTCACATTCAACAC+AGG + chr2_1:16226418-16226437 None:intergenic 35.0%
!! ATTGATTCTAGCTTGAAGCT+AGG + chr2_1:16226650-16226669 None:intergenic 35.0%
! GCAACCAAAATTGATTCTGA+AGG + chr2_1:16226714-16226733 None:intergenic 35.0%
!!! AATTTTGGTTGCTCCAAATG+TGG - chr2_1:16226722-16226741 Msa0197870:CDS 35.0%
AAACATACTTGGCCTATGTT+TGG + chr2_1:16226750-16226769 None:intergenic 35.0%
AAACATAGGCCAAGTATGTT+TGG - chr2_1:16226749-16226768 Msa0197870:CDS 35.0%
AACATAGGCCAAGTATGTTT+GGG - chr2_1:16226750-16226769 Msa0197870:CDS 35.0%
GCAGTATGAATAAACATGCT+CGG + chr2_1:16226986-16227005 None:intergenic 35.0%
AACAACATCAGAAAACATCC+GGG - chr2_1:16227163-16227182 Msa0197870:intron 35.0%
ACAGAGTTAGACAAATCTTC+AGG + chr2_1:16227258-16227277 None:intergenic 35.0%
AACACGTCAAAGCAGAATAT+CGG - chr2_1:16227282-16227301 Msa0197870:intron 35.0%
ACAAAGCAAATGACATGAGA+TGG - chr2_1:16227670-16227689 Msa0197870:intron 35.0%
CAAAGCAAATGACATGAGAT+GGG - chr2_1:16227671-16227690 Msa0197870:intron 35.0%
TAGAACTAGAGATGGTTCAT+TGG - chr2_1:16227710-16227729 Msa0197870:intron 35.0%
AGAACTAGAGATGGTTCATT+GGG - chr2_1:16227711-16227730 Msa0197870:intron 35.0%
! GTTTACTTATCTGAGTTGAG+TGG - chr2_1:16227786-16227805 Msa0197870:intron 35.0%
TTACTTCGCAATGAAAGTGA+TGG - chr2_1:16227818-16227837 Msa0197870:intron 35.0%
!! CAATGAAAGTGATGGACAAA+GGG - chr2_1:16227826-16227845 Msa0197870:intron 35.0%
GTAACAGTTCATGTGAAATC+TGG - chr2_1:16228266-16228285 Msa0197870:CDS 35.0%
TGTTTGATTAAGAGTAGGGT+AGG - chr2_1:16228363-16228382 Msa0197870:CDS 35.0%
GTTTGATTAAGAGTAGGGTA+GGG - chr2_1:16228364-16228383 Msa0197870:CDS 35.0%
TTTGATTAAGAGTAGGGTAG+GGG - chr2_1:16228365-16228384 Msa0197870:CDS 35.0%
! CACATTCAAAGAGTTTTGCA+GGG + chr2_1:16228434-16228453 None:intergenic 35.0%
! ACACATTCAAAGAGTTTTGC+AGG + chr2_1:16228435-16228454 None:intergenic 35.0%
AGAGTGTAACAAGACTATGA+AGG + chr2_1:16228497-16228516 None:intergenic 35.0%
TGTGTAATCCCAATTCTCAA+AGG + chr2_1:16228556-16228575 None:intergenic 35.0%
!! CATAACTTGCAGATTTTACG+TGG - chr2_1:16228937-16228956 Msa0197870:intron 35.0%
!!! CATTTTCTGGCTTAAGATCA+CGG + chr2_1:16229012-16229031 None:intergenic 35.0%
AGCCAGAAAATGTTCTTGTT+AGG - chr2_1:16229020-16229039 Msa0197870:intron 35.0%
GCCAGAAAATGTTCTTGTTA+GGG - chr2_1:16229021-16229040 Msa0197870:intron 35.0%
! TCCCTAACAAGAACATTTTC+TGG + chr2_1:16229025-16229044 None:intergenic 35.0%
AATGTTCTTGTTAGGGATGA+TGG - chr2_1:16229028-16229047 Msa0197870:intron 35.0%
AATCGACGAGGATTTAACTA+GGG + chr2_1:16229107-16229126 None:intergenic 35.0%
! GAGCCTTTAAGAAAGAATAC+TGG - chr2_1:16229133-16229152 Msa0197870:intron 35.0%
!! TTGATTTGCTAGAAAAGAGC+CGG + chr2_1:16229240-16229259 None:intergenic 35.0%
CAAATCAAAGAAAGAACGCA+AGG - chr2_1:16229252-16229271 Msa0197870:intron 35.0%
TTTGGCAAAACTCCGTTTAA+GGG - chr2_1:16229457-16229476 Msa0197870:intron 35.0%
!! CACAGATTGGCTTATAAAAG+AGG - chr2_1:16229601-16229620 Msa0197870:intron 35.0%
CAATTCACGCCTTCAAAAAA+GGG + chr2_1:16229649-16229668 None:intergenic 35.0%
!!! CTTTTTTGAAGGCGTGAATT+GGG - chr2_1:16229648-16229667 Msa0197870:intron 35.0%
TGTTGACATGTGGTTAACAA+CGG + chr2_1:16229767-16229786 None:intergenic 35.0%
TCAACAACTCCTAATCAGAA+AGG - chr2_1:16229781-16229800 Msa0197870:intron 35.0%
TTGTCAGAACCTTTCTGATT+AGG + chr2_1:16229793-16229812 None:intergenic 35.0%
TCTAGAAGAAATCAAACTCC+AGG + chr2_1:16229819-16229838 None:intergenic 35.0%
!! AGATGGTTTTCTTTTAGAGG+TGG - chr2_1:16229874-16229893 Msa0197870:intron 35.0%
!! GATGGTTTTCTTTTAGAGGT+GGG - chr2_1:16229875-16229894 Msa0197870:intron 35.0%
ACTCCATATCTAAGAGTCTT+AGG - chr2_1:16230094-16230113 Msa0197870:five_prime_UTR 35.0%
GAACCTAAGACTCTTAGATA+TGG + chr2_1:16230100-16230119 None:intergenic 35.0%
TGCAGTTACATCTTACTAGA+AGG + chr2_1:16230130-16230149 None:intergenic 35.0%
!! ACATCAATCCACTTTTGTCT+GGG + chr2_1:16230262-16230281 None:intergenic 35.0%
!! TACATCAATCCACTTTTGTC+TGG + chr2_1:16230263-16230282 None:intergenic 35.0%
! TCTTCTCTCTTGGTAGCTTT+AGG + chr2_1:16225694-16225713 None:intergenic 40.0%
!!! CAAACTCAGAGGTACTCTTT+TGG - chr2_1:16225753-16225772 Msa0197870:three_prime_UTR 40.0%
!! TGATTTGCTAAATGGGTCCT+AGG - chr2_1:16226232-16226251 Msa0197870:CDS 40.0%
TATGGTGTTCCGTCTCAAAA+GGG - chr2_1:16227327-16227346 Msa0197870:intron 40.0%
CTGAGTAGTAAATTCGGTTC+TGG - chr2_1:16227366-16227385 Msa0197870:intron 40.0%
GTTCACATTAACAACGGATG+AGG + chr2_1:16227397-16227416 None:intergenic 40.0%
TCCGTTGTTAATGTGAACAC+AGG - chr2_1:16227399-16227418 Msa0197870:intron 40.0%
GCCTGTGTTCACATTAACAA+CGG + chr2_1:16227403-16227422 None:intergenic 40.0%
CACTCTCAACAAAATCAGCT+CGG + chr2_1:16227560-16227579 None:intergenic 40.0%
! CTCATGTCATTTGCTTTGTG+AGG + chr2_1:16227669-16227688 None:intergenic 40.0%
!! CATCTCTAGTTCTAACCACT+TGG + chr2_1:16227704-16227723 None:intergenic 40.0%
CAAGTGGTTAGAACTAGAGA+TGG - chr2_1:16227702-16227721 Msa0197870:intron 40.0%
AGAGATGGTTCATTGGGTTT+AGG - chr2_1:16227717-16227736 Msa0197870:intron 40.0%
! TTCAGACTTCTGAAGAGACT+GGG - chr2_1:16227744-16227763 Msa0197870:intron 40.0%
!! GCAATGAAAGTGATGGACAA+AGG - chr2_1:16227825-16227844 Msa0197870:intron 40.0%
GTAAGAAGTTACTTCGTGCT+CGG - chr2_1:16227862-16227881 Msa0197870:intron 40.0%
TGTACAAAGTTGGGAGAAAC+GGG + chr2_1:16227920-16227939 None:intergenic 40.0%
GTGTACAAAGTTGGGAGAAA+CGG + chr2_1:16227921-16227940 None:intergenic 40.0%
!! GAAATTTTCGTGCTTGGTGA+TGG - chr2_1:16227956-16227975 Msa0197870:CDS 40.0%
AACCATGTATGGTTCGAATG+AGG - chr2_1:16228314-16228333 Msa0197870:CDS 40.0%
! GAGTTTTGCAGGGAAAGTTT+TGG + chr2_1:16228424-16228443 None:intergenic 40.0%
! GACTATGAAGGTACAGAAAC+AGG + chr2_1:16228485-16228504 None:intergenic 40.0%
CTTCATGCAGGACTCAAAAA+AGG + chr2_1:16228615-16228634 None:intergenic 40.0%
! GATATCTGAAATTGCTTGGC+AGG + chr2_1:16228652-16228671 None:intergenic 40.0%
CAATCGACGAGGATTTAACT+AGG + chr2_1:16229108-16229127 None:intergenic 40.0%
!! TGATTTGCTAGAAAAGAGCC+GGG + chr2_1:16229239-16229258 None:intergenic 40.0%
! TTGATTGCCAAGTTCGGTTT+TGG + chr2_1:16229278-16229297 None:intergenic 40.0%
!! ACTGACTTGATTGCCAAGTT+CGG + chr2_1:16229284-16229303 None:intergenic 40.0%
TGTTGGAACTCATGAATACC+TGG - chr2_1:16229354-16229373 Msa0197870:intron 40.0%
CTGGCACCTGAAATAATCAA+GGG - chr2_1:16229373-16229392 Msa0197870:intron 40.0%
CCTTCACCCTTGATTATTTC+AGG + chr2_1:16229382-16229401 None:intergenic 40.0%
CCTGAAATAATCAAGGGTGA+AGG - chr2_1:16229379-16229398 Msa0197870:intron 40.0%
ATAATCAAGGGTGAAGGTCA+CGG - chr2_1:16229385-16229404 Msa0197870:intron 40.0%
GTTTGGCAAAACTCCGTTTA+AGG - chr2_1:16229456-16229475 Msa0197870:intron 40.0%
AAAACTCCGTTTAAGGGATC+CGG - chr2_1:16229463-16229482 Msa0197870:intron 40.0%
!! TGTTGTTAGCTTTGCAGCAA+GGG - chr2_1:16229543-16229562 Msa0197870:intron 40.0%
! TATCAGGGGTTTGCTTGTAA+AGG - chr2_1:16229570-16229589 Msa0197870:intron 40.0%
TTATAAGCCAATCTGTGCTG+AGG + chr2_1:16229598-16229617 None:intergenic 40.0%
CCAATTCACGCCTTCAAAAA+AGG + chr2_1:16229650-16229669 None:intergenic 40.0%
!!! CCTTTTTTGAAGGCGTGAAT+TGG - chr2_1:16229647-16229666 Msa0197870:intron 40.0%
TTCTCAAACTCAACAGCCTT+TGG + chr2_1:16229706-16229725 None:intergenic 40.0%
GATTAGGAGTTGTTGACATG+TGG + chr2_1:16229777-16229796 None:intergenic 40.0%
! GAAAGGTTCTGACAATTACC+TGG - chr2_1:16229798-16229817 Msa0197870:intron 40.0%
!! GTTTTCTTTTAGAGGTGGGA+GGG - chr2_1:16229879-16229898 Msa0197870:intron 40.0%
GTTTCAAGGAACAGATGATG+AGG - chr2_1:16229916-16229935 Msa0197870:intron 40.0%
GAGGAGGGAAATTGCATATT+TGG - chr2_1:16230065-16230084 Msa0197870:five_prime_UTR 40.0%
! GAGAAGTAGCGTTGAAGTAA+TGG - chr2_1:16230196-16230215 Msa0197870:five_prime_UTR 40.0%
!! TCGAGATTAGCCTGTTGTTA+AGG - chr2_1:16230307-16230326 Msa0197870:five_prime_UTR 40.0%
TAGCCTGTTGTTAAGGAAAG+AGG - chr2_1:16230314-16230333 Msa0197870:five_prime_UTR 40.0%
AGCCTGTTGTTAAGGAAAGA+GGG - chr2_1:16230315-16230334 Msa0197870:five_prime_UTR 40.0%
!! AGGCTTTAGAGAGAGACACT+GGG + chr2_1:16225674-16225693 None:intergenic 45.0%
!! TAGGCTTTAGAGAGAGACAC+TGG + chr2_1:16225675-16225694 None:intergenic 45.0%
AGAGAGAGGTTCTTCTCTCT+TGG + chr2_1:16225704-16225723 None:intergenic 45.0%
!!! ACTCAGAGGTACTCTTTTGG+TGG - chr2_1:16225756-16225775 Msa0197870:three_prime_UTR 45.0%
!!! CTCAGAGGTACTCTTTTGGT+GGG - chr2_1:16225757-16225776 Msa0197870:three_prime_UTR 45.0%
TGGGTCTCTCTCTTTCTCTT+TGG - chr2_1:16225849-16225868 Msa0197870:three_prime_UTR 45.0%
TGTGTTGTGTCTGAGGGTTT+AGG - chr2_1:16226292-16226311 Msa0197870:CDS 45.0%
TTGTGTCTGAGGGTTTAGGT+TGG - chr2_1:16226296-16226315 Msa0197870:CDS 45.0%
CCTATGTTTGGCACCACATT+TGG + chr2_1:16226738-16226757 None:intergenic 45.0%
! CCAAATGTGGTGCCAAACAT+AGG - chr2_1:16226735-16226754 Msa0197870:CDS 45.0%
ATAGGCCAAGTATGTTTGGG+TGG - chr2_1:16226753-16226772 Msa0197870:CDS 45.0%
TAGGCCAAGTATGTTTGGGT+GGG - chr2_1:16226754-16226773 Msa0197870:CDS 45.0%
! TGAAGAAATTCACGGTGCTG+CGG + chr2_1:16226800-16226819 None:intergenic 45.0%
GTATGGTGTTCCGTCTCAAA+AGG - chr2_1:16227326-16227345 Msa0197870:intron 45.0%
!! GCAGAAGAACCCTTTTGAGA+CGG + chr2_1:16227339-16227358 None:intergenic 45.0%
CACATTAACAACGGATGAGG+AGG + chr2_1:16227394-16227413 None:intergenic 45.0%
ACTTGTCTTCGCAATACTGC+TGG + chr2_1:16227517-16227536 None:intergenic 45.0%
AGCAGTATTGCGAAGACAAG+TGG - chr2_1:16227516-16227535 Msa0197870:intron 45.0%
!! CGAGCTGATTTTGTTGAGAG+TGG - chr2_1:16227558-16227577 Msa0197870:intron 45.0%
GGTAAGAGCAGTATTTGCAG+AGG - chr2_1:16227579-16227598 Msa0197870:intron 45.0%
GTCTCTTCAGAAGTCTGAAG+TGG + chr2_1:16227743-16227762 None:intergenic 45.0%
! CTTCAGACTTCTGAAGAGAC+TGG - chr2_1:16227743-16227762 Msa0197870:intron 45.0%
AGACTGGGTTGTGGAGATAT+TGG - chr2_1:16227759-16227778 Msa0197870:intron 45.0%
! GACGGAGAAATTTTCGTGCT+TGG - chr2_1:16227950-16227969 Msa0197870:CDS 45.0%
!! GTTGTTTCTGCCGAAGAGTA+TGG + chr2_1:16228004-16228023 None:intergenic 45.0%
CTCCTCATTCGAACCATACA+TGG + chr2_1:16228319-16228338 None:intergenic 45.0%
TGTATGGTTCGAATGAGGAG+AGG - chr2_1:16228319-16228338 Msa0197870:CDS 45.0%
GTATGGTTCGAATGAGGAGA+GGG - chr2_1:16228320-16228339 Msa0197870:CDS 45.0%
! TTGCAGATTTTACGTGGCAG+AGG - chr2_1:16228943-16228962 Msa0197870:intron 45.0%
! ATGGAGTACCTACACATGCT+CGG - chr2_1:16228977-16228996 Msa0197870:intron 45.0%
ATACAATCCCGAGCATGTGT+AGG + chr2_1:16228988-16229007 None:intergenic 45.0%
TCGAAGGGAAAGGTCAAAGT+CGG + chr2_1:16229068-16229087 None:intergenic 45.0%
TAACAGCACATCGAAGGGAA+AGG + chr2_1:16229078-16229097 None:intergenic 45.0%
TGGACTAACAGCACATCGAA+GGG + chr2_1:16229083-16229102 None:intergenic 45.0%
TTGGACTAACAGCACATCGA+AGG + chr2_1:16229084-16229103 None:intergenic 45.0%
GACGAGGATTTAACTAGGGT+TGG + chr2_1:16229103-16229122 None:intergenic 45.0%
! CTACCTCATGTTTTTCACCC+CGG - chr2_1:16229218-16229237 Msa0197870:intron 45.0%
!! GATTTGCTAGAAAAGAGCCG+GGG + chr2_1:16229238-16229257 None:intergenic 45.0%
! CCTTGATTATTTCAGGTGCC+AGG + chr2_1:16229375-16229394 None:intergenic 45.0%
CCTGGCACCTGAAATAATCA+AGG - chr2_1:16229372-16229391 Msa0197870:intron 45.0%
!! GCAGTTGATTGGTGGACTTA+TGG - chr2_1:16229412-16229431 Msa0197870:intron 45.0%
AAACTCCGTTTAAGGGATCC+GGG - chr2_1:16229464-16229483 Msa0197870:intron 45.0%
ACCTACCACGTTAAACAGTG+TGG + chr2_1:16229497-16229516 None:intergenic 45.0%
AAGCTAACAACAGGTGCTTC+TGG + chr2_1:16229535-16229554 None:intergenic 45.0%
CTTGCTGCAAAGCTAACAAC+AGG + chr2_1:16229544-16229563 None:intergenic 45.0%
!! CTGTTGTTAGCTTTGCAGCA+AGG - chr2_1:16229542-16229561 Msa0197870:intron 45.0%
TTGCAGCAAGGGATCTTATC+AGG - chr2_1:16229554-16229573 Msa0197870:intron 45.0%
TGCAGCAAGGGATCTTATCA+GGG - chr2_1:16229555-16229574 Msa0197870:intron 45.0%
AAAGGAACCTCAGCACAGAT+TGG - chr2_1:16229588-16229607 Msa0197870:intron 45.0%
TACACCACCTGAGATTCCAA+AGG - chr2_1:16229687-16229706 Msa0197870:intron 45.0%
!! TCAACAGCCTTTGGAATCTC+AGG + chr2_1:16229697-16229716 None:intergenic 45.0%
!! GGTTTTCTTTTAGAGGTGGG+AGG - chr2_1:16229878-16229897 Msa0197870:intron 45.0%
! GTGCTACTCACTCGAATTGT+CGG - chr2_1:16230043-16230062 Msa0197870:five_prime_UTR 45.0%
AGTGAAGTCCCAGACAAAAG+TGG - chr2_1:16230251-16230270 Msa0197870:five_prime_UTR 45.0%
CACCCTCTTTCCTTAACAAC+AGG + chr2_1:16230320-16230339 None:intergenic 45.0%
CTGTTGTTAAGGAAAGAGGG+TGG - chr2_1:16230318-16230337 Msa0197870:five_prime_UTR 45.0%
!! GTTGGCTGTGGTGGACTATT+AGG + chr2_1:16225648-16225667 None:intergenic 50.0%
AATAGTCCACCACAGCCAAC+AGG - chr2_1:16225648-16225667 Msa0197870:three_prime_UTR 50.0%
TTGGGTTCAGAGAGAGAGAG+AGG + chr2_1:16225718-16225737 None:intergenic 50.0%
ATCGCCCACCCAAACATACT+TGG + chr2_1:16226761-16226780 None:intergenic 50.0%
ATCCGGGATTCAAACACCTG+AGG - chr2_1:16227179-16227198 Msa0197870:intron 50.0%
AACTTGAGGTCTTTCGCCTC+AGG + chr2_1:16227198-16227217 None:intergenic 50.0%
GCGACAGCGAAGAAAACTTG+AGG + chr2_1:16227212-16227231 None:intergenic 50.0%
! TCGCTGTCGCTTCAAAAGAC+AGG - chr2_1:16227222-16227241 Msa0197870:intron 50.0%
! CGCTGTCGCTTCAAAAGACA+GGG - chr2_1:16227223-16227242 Msa0197870:intron 50.0%
GTTTCTGCGAAAGCTAGCGA+TGG - chr2_1:16227489-16227508 Msa0197870:intron 50.0%
GAGATGGGAAGCTATCCAAG+TGG - chr2_1:16227686-16227705 Msa0197870:intron 50.0%
! CTTCTGAAGAGACTGGGTTG+TGG - chr2_1:16227750-16227769 Msa0197870:intron 50.0%
GAAGTTACTTCGTGCTCGGA+CGG - chr2_1:16227866-16227885 Msa0197870:intron 50.0%
ACAAAGTTGGGAGAAACGGG+TGG + chr2_1:16227917-16227936 None:intergenic 50.0%
!! CTTGGTGATGGAATTCTGCC+CGG - chr2_1:16227968-16227987 Msa0197870:CDS 50.0%
!! TTGGTGATGGAATTCTGCCC+GGG - chr2_1:16227969-16227988 Msa0197870:CDS 50.0%
GTGGAGACCTCCATACTCTT+CGG - chr2_1:16227991-16228010 Msa0197870:CDS 50.0%
! GTTTCTGCCGAAGAGTATGG+AGG + chr2_1:16228001-16228020 None:intergenic 50.0%
ACTCTTCGGCAGAAACAACC+AGG - chr2_1:16228005-16228024 Msa0197870:CDS 50.0%
CTCTTCGGCAGAAACAACCA+GGG - chr2_1:16228006-16228025 Msa0197870:CDS 50.0%
TGCTCAGGAAAATGCTTCCC+TGG + chr2_1:16228026-16228045 None:intergenic 50.0%
!!! AGGGAAGCATTTTCCTGAGC+AGG - chr2_1:16228025-16228044 Msa0197870:CDS 50.0%
ACATACTTCACTGCCTGCTC+AGG + chr2_1:16228041-16228060 None:intergenic 50.0%
TTAAGAGTAGGGTAGGGGAG+AGG - chr2_1:16228370-16228389 Msa0197870:CDS 50.0%
TTACGTGGCAGAGGTTCTAC+TGG - chr2_1:16228952-16228971 Msa0197870:intron 50.0%
! TGGAGTACCTACACATGCTC+GGG - chr2_1:16228978-16228997 Msa0197870:intron 50.0%
!! AGGCTCTGAATCAATCGACG+AGG + chr2_1:16229119-16229138 None:intergenic 50.0%
AACACAGGATGGCTGAATGC+AGG + chr2_1:16229194-16229213 None:intergenic 50.0%
ACATGAGGTAGGAGCAACAC+AGG + chr2_1:16229209-16229228 None:intergenic 50.0%
CGGGGTGAAAAACATGAGGT+AGG + chr2_1:16229220-16229239 None:intergenic 50.0%
TCTGCAATGAGCTCAGGTAG+AGG + chr2_1:16229307-16229326 None:intergenic 50.0%
AAACGACATAGAGCGAGCGT+CGG + chr2_1:16229335-16229354 None:intergenic 50.0%
! GCTCGCTCTATGTCGTTTGT+TGG - chr2_1:16229337-16229356 Msa0197870:intron 50.0%
CCACGTTAAACAGTGTGGCT+CGG + chr2_1:16229492-16229511 None:intergenic 50.0%
GCCACACTGTTTAACGTGGT+AGG - chr2_1:16229493-16229512 Msa0197870:intron 50.0%
GCAGCAAGGGATCTTATCAG+GGG - chr2_1:16229556-16229575 Msa0197870:intron 50.0%
TGGTGTAGCACATCGGATCA+AGG + chr2_1:16229674-16229693 None:intergenic 50.0%
TCTCAGGTGGTGTAGCACAT+CGG + chr2_1:16229681-16229700 None:intergenic 50.0%
!! ACAGCCTTTGGAATCTCAGG+TGG + chr2_1:16229694-16229713 None:intergenic 50.0%
CTACTCACTCGAATTGTCGG+AGG - chr2_1:16230046-16230065 Msa0197870:five_prime_UTR 50.0%
TCACTCGAATTGTCGGAGGA+GGG - chr2_1:16230050-16230069 Msa0197870:five_prime_UTR 50.0%
GGAAAGAGGGTGGAAAAGTG+TGG - chr2_1:16230328-16230347 Msa0197870:five_prime_UTR 50.0%
GCAGAGAGAGAGAGAGAGAG+AGG + chr2_1:16225626-16225645 None:intergenic 55.0%
GTTTGGGTGGGCGATGAGTT+TGG - chr2_1:16226766-16226785 Msa0197870:CDS 55.0%
CGCCTCAGGTGTTTGAATCC+CGG + chr2_1:16227184-16227203 None:intergenic 55.0%
TACTTCGTGCTCGGACGGAA+CGG - chr2_1:16227871-16227890 Msa0197870:intron 55.0%
AGAGTATGGAGGTCTCCACC+CGG + chr2_1:16227990-16228009 None:intergenic 55.0%
GGGGAGAGGAGGGATTCAAT+TGG - chr2_1:16228384-16228403 Msa0197870:CDS 55.0%
GGCAGAGGTTCTACTGGCAA+TGG - chr2_1:16228958-16228977 Msa0197870:intron 55.0%
! GATGGCGGCTCAATACATGC+AGG + chr2_1:16229172-16229191 None:intergenic 55.0%
GATGGCTGAATGCAGGATGG+CGG + chr2_1:16229187-16229206 None:intergenic 55.0%
CAGGATGGCTGAATGCAGGA+TGG + chr2_1:16229190-16229209 None:intergenic 55.0%
GAGGTAGGAGCAACACAGGA+TGG + chr2_1:16229205-16229224 None:intergenic 55.0%
GAGCCGGGGTGAAAAACATG+AGG + chr2_1:16229224-16229243 None:intergenic 55.0%
CGCAAGGCCAAAACCGAACT+TGG - chr2_1:16229268-16229287 Msa0197870:intron 55.0%
GTCACGGCAGTGCAGTTGAT+TGG - chr2_1:16229401-16229420 Msa0197870:intron 55.0%
ACGGCAGTGCAGTTGATTGG+TGG - chr2_1:16229404-16229423 Msa0197870:intron 55.0%
CGGTTCCCGGATCCCTTAAA+CGG + chr2_1:16229472-16229491 None:intergenic 55.0%
!! AAACAGTGTGGCTCGGTTCC+CGG + chr2_1:16229485-16229504 None:intergenic 55.0%
CCGAGCCACACTGTTTAACG+TGG - chr2_1:16229489-16229508 Msa0197870:intron 55.0%
! GGTGCTTCTGGAAATCGCAG+CGG + chr2_1:16229523-16229542 None:intergenic 55.0%
TGCATCGTCTGCTGGCGATA+AGG - chr2_1:16229741-16229760 Msa0197870:intron 55.0%
CTCACTCGAATTGTCGGAGG+AGG - chr2_1:16230049-16230068 Msa0197870:five_prime_UTR 55.0%
! AGGGTGGAAAAGTGTGGCGA+GGG - chr2_1:16230334-16230353 Msa0197870:five_prime_UTR 55.0%
GAGAGAGACACTGGGCCTGT+TGG + chr2_1:16225666-16225685 None:intergenic 60.0%
ACTTCGTGCTCGGACGGAAC+GGG - chr2_1:16227872-16227891 Msa0197870:intron 60.0%
! GTGATGGAATTCTGCCCGGG+TGG - chr2_1:16227972-16227991 Msa0197870:CDS 60.0%
GAGTATGGAGGTCTCCACCC+GGG + chr2_1:16227989-16228008 None:intergenic 60.0%
AGAGTAGGGTAGGGGAGAGG+AGG - chr2_1:16228373-16228392 Msa0197870:CDS 60.0%
GAGTAGGGTAGGGGAGAGGA+GGG - chr2_1:16228374-16228393 Msa0197870:CDS 60.0%
GTGGGCTCTGCAATGAGCTC+AGG + chr2_1:16229313-16229332 None:intergenic 60.0%
!! GACATAGAGCGAGCGTCGGT+GGG + chr2_1:16229331-16229350 None:intergenic 60.0%
! GAGGGTGGAAAAGTGTGGCG+AGG - chr2_1:16230333-16230352 Msa0197870:five_prime_UTR 60.0%
! GGGTGGAAAAGTGTGGCGAG+GGG - chr2_1:16230335-16230354 Msa0197870:five_prime_UTR 60.0%
! GGTGGAAAAGTGTGGCGAGG+GGG - chr2_1:16230336-16230355 Msa0197870:five_prime_UTR 60.0%
! ACTGGGCCTGTTGGCTGTGG+TGG + chr2_1:16225657-16225676 None:intergenic 65.0%
! GACACTGGGCCTGTTGGCTG+TGG + chr2_1:16225660-16225679 None:intergenic 65.0%
!! CGACATAGAGCGAGCGTCGG+TGG + chr2_1:16229332-16229351 None:intergenic 65.0%
GCAGACGATGCAGCTGGGGA+AGG + chr2_1:16229733-16229752 None:intergenic 65.0%
TCCCCAGCTGCATCGTCTGC+TGG - chr2_1:16229733-16229752 Msa0197870:intron 65.0%
GCCAGCAGACGATGCAGCTG+GGG + chr2_1:16229737-16229756 None:intergenic 65.0%
CGCCAGCAGACGATGCAGCT+GGG + chr2_1:16229738-16229757 None:intergenic 65.0%
TCGCCAGCAGACGATGCAGC+TGG + chr2_1:16229739-16229758 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 16225619 16230359 16225619 ID=Msa0197870;Name=Msa0197870
chr2_1 mRNA 16225619 16230359 16225619 ID=Msa0197870-mRNA-1;Parent=Msa0197870;Name=Msa0197870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=428|1|1|1|0.5|0.33|3|522|604
chr2_1 exon 16225619 16227029 16225619 ID=Msa0197870-mRNA-1:exon:6753;Parent=Msa0197870-mRNA-1
chr2_1 exon 16227924 16228937 16227924 ID=Msa0197870-mRNA-1:exon:6752;Parent=Msa0197870-mRNA-1
chr2_1 exon 16230020 16230359 16230020 ID=Msa0197870-mRNA-1:exon:6751;Parent=Msa0197870-mRNA-1
chr2_1 five_prime_UTR 16230020 16230359 16230020 ID=Msa0197870-mRNA-1:five_prime_utr;Parent=Msa0197870-mRNA-1
chr2_1 five_prime_UTR 16228850 16228937 16228850 ID=Msa0197870-mRNA-1:five_prime_utr;Parent=Msa0197870-mRNA-1
chr2_1 CDS 16227924 16228849 16227924 ID=Msa0197870-mRNA-1:cds;Parent=Msa0197870-mRNA-1
chr2_1 CDS 16226141 16227029 16226141 ID=Msa0197870-mRNA-1:cds;Parent=Msa0197870-mRNA-1
chr2_1 three_prime_UTR 16225619 16226140 16225619 ID=Msa0197870-mRNA-1:three_prime_utr;Parent=Msa0197870-mRNA-1
Gene Sequence

>Msa0197870

ATGGACTCGAAAACTAGTGCTAGATCTCTATCTAAACAACATCAGAAAACATCCGGGATTCAAACACCTGAGGCGAAAGACCTCAAGTTTTCTTCGCTGTCGCTTCAAAAGACAGGGAAATCTGAGCCTGAAGATTTGTCTAACTCTGTACAAAACACGTCAAAGCAGAATATCGGCGAAATTTATGAAAGTAAGAAGTATGGTGTTCCGTCTCAAAAGGGTTCTTCTGCTGATTCACTGAGTAGTAAATTCGGTTCTGGTGCCTCCTCATCCGTTGTTAATGTGAACACAGGCTCACAAGAAAGCTCTATCGATCAAGACAAAAAGACTTCAGAATATGGAAGTGTGAAAAACAGTTCTGTTTCTGCGAAAGCTAGCGATGGTGCCAGCAGTATTGCGAAGACAAGTGGAAGTGCTAAGATCAGTGACCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGCGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCGTAAACAAGCCTCACAAAGCAAATGACATGAGATGGGAAGCTATCCAAGTGGTTAGAACTAGAGATGGTTCATTGGGTTTAGGCCACTTCAGACTTCTGAAGAGACTGGGTTGTGGAGATATTGGCAGCGTTTACTTATCTGAGTTGAGTGGAACTAAATGTTACTTCGCAATGAAAGTGATGGACAAAGGGTCTTTAGCAAGTCGTAAGAAGTTACTTCGTGCTCGGACGGAACGGGAAATTCTTCAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAGACGGAGAAATTTTCGTGCTTGGTGATGGAATTCTGCCCGGGTGGAGACCTCCATACTCTTCGGCAGAAACAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAATTTTACGTGGCAGAGGTTCTACTGGCAATGGAGTACCTACACATGCTCGGGATTGTATACCGTGATCTTAAGCCAGAAAATGTTCTTGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTTCGATGTGCTGTTAGTCCAACCCTAGTTAAATCCTCGTCGATTGATTCAGAGCCTTTAAGAAAGAATACTGGTTACTGTGCTCAGCCTGCATGTATTGAGCCGCCATCCTGCATTCAGCCATCCTGTGTTGCTCCTACCTCATGTTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAAGAACGCAAGGCCAAAACCGAACTTGGCAATCAAGTCAGTCCTCTACCTGAGCTCATTGCAGAGCCCACCGACGCTCGCTCTATGTCGTTTGTTGGAACTCATGAATACCTGGCACCTGAAATAATCAAGGGTGAAGGTCACGGCAGTGCAGTTGATTGGTGGACTTATGGAATCTTTCTATACGAGTTGTTGTTTGGCAAAACTCCGTTTAAGGGATCCGGGAACCGAGCCACACTGTTTAACGTGGTAGGTCAGCCGCTGCGATTTCCAGAAGCACCTGTTGTTAGCTTTGCAGCAAGGGATCTTATCAGGGGTTTGCTTGTAAAGGAACCTCAGCACAGATTGGCTTATAAAAGAGGCGCAACCGAGATTAAACAACATCCCTTTTTTGAAGGCGTGAATTGGGCCTTGATCCGATGTGCTACACCACCTGAGATTCCAAAGGCTGTTGAGTTTGAGAAGATACCTTCCCCAGCTGCATCGTCTGCTGGCGATAAGGCCGTTGTTAACCACATGTCAACAACTCCTAATCAGAAAGGTTCTGACAATTACCTGGAGTTTGATTTCTTCTAG
Protein sequence

>Msa0197870

MDSKTSARSLSKQHQKTSGIQTPEAKDLKFSSLSLQKTGKSEPEDLSNSVQNTSKQNIGEIYESKKYGVPSQKGSSADSLSSKFGSGASSSVVNVNTGSQESSIDQDKKTSEYGSVKNSSVSAKASDGASSIAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDMRWEAIQVVRTRDGSLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRARTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSIDSEPLRKNTGYCAQPACIEPPSCIQPSCVAPTSCFSPRLFSSKSKKERKAKTELGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPAASSAGDKAVVNHMSTTPNQKGSDNYLEFDFF*