AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0239540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239540 MtrunA17_Chr2g0290691 99.007 604 6 0 1 604 1 604 0.0 1236
Msa0239540 MtrunA17_Chr7g0227331 72.117 477 110 5 131 604 162 618 0.0 691
Msa0239540 MtrunA17_Chr6g0449401 63.774 530 132 6 113 604 172 679 0.0 689
Msa0239540 MtrunA17_Chr8g0335351 68.254 504 138 6 115 604 276 771 0.0 680
Msa0239540 MtrunA17_Chr7g0250631 65.764 517 156 8 99 604 255 761 0.0 678
Msa0239540 MtrunA17_Chr1g0179101 64.853 441 148 6 127 567 394 827 0.0 586
Msa0239540 MtrunA17_Chr7g0266031 63.029 449 159 6 118 566 407 848 0.0 575
Msa0239540 MtrunA17_Chr2g0309421 62.306 451 156 8 158 604 131 571 0.0 566
Msa0239540 MtrunA17_Chr8g0356291 62.306 451 158 7 159 604 81 524 0.0 565
Msa0239540 MtrunA17_Chr3g0080101 58.017 474 185 6 132 604 342 802 0.0 559
Msa0239540 MtrunA17_Chr4g0063311 56.219 402 147 7 179 561 66 457 1.80e-151 445
Msa0239540 MtrunA17_Chr2g0321101 53.927 382 153 6 183 554 66 434 1.22e-135 404
Msa0239540 MtrunA17_Chr2g0285711 47.907 430 178 8 148 561 26 425 1.38e-130 390
Msa0239540 MtrunA17_Chr8g0381091 50.630 397 157 9 179 561 52 423 4.82e-130 389
Msa0239540 MtrunA17_Chr2g0312641 44.417 412 180 10 157 560 49 419 4.88e-113 346
Msa0239540 MtrunA17_Chr8g0369091 43.489 407 178 5 179 584 572 927 2.71e-109 349
Msa0239540 MtrunA17_Chr4g0030361 42.932 382 164 3 179 560 282 609 4.60e-102 323
Msa0239540 MtrunA17_Chr2g0327561 43.702 389 176 3 179 567 601 946 1.19e-98 322
Msa0239540 MtrunA17_Chr8g0338741 40.256 390 181 13 197 567 11 367 1.89e-78 254
Msa0239540 MtrunA17_Chr2g0329011 38.187 364 180 7 201 561 12 333 5.42e-75 244
Msa0239540 MtrunA17_Chr4g0032761 38.544 371 207 8 201 561 10 369 6.02e-74 243
Msa0239540 MtrunA17_Chr7g0234641 35.040 371 209 8 200 562 7 353 2.41e-65 220
Msa0239540 MtrunA17_Chr5g0428981 33.705 359 186 7 206 563 763 1070 2.98e-55 202
Msa0239540 MtrunA17_Chr4g0018201 33.426 359 187 7 206 563 759 1066 3.65e-55 202
Msa0239540 MtrunA17_Chr6g0478601 33.046 348 182 6 203 549 108 405 3.92e-55 195
Msa0239540 MtrunA17_Chr3g0135951 31.540 409 228 12 185 578 73 444 5.54e-54 192
Msa0239540 MtrunA17_Chr1g0153321 30.691 391 215 10 192 570 94 440 7.74e-49 178
Msa0239540 MtrunA17_Chr1g0187581 31.959 388 211 12 192 569 103 447 7.36e-47 172
Msa0239540 MtrunA17_Chr1g0183651 30.155 388 217 10 192 569 106 449 1.96e-45 169
Msa0239540 MtrunA17_Chr2g0299781 29.340 409 239 11 185 578 92 465 3.83e-45 167
Msa0239540 MtrunA17_Chr7g0261491 29.949 394 214 12 192 569 106 453 1.22e-44 167
Msa0239540 MtrunA17_Chr1g0167351 29.897 388 220 11 192 569 96 441 1.76e-44 166
Msa0239540 MtrunA17_Chr1g0167311 29.581 382 210 10 192 563 101 433 2.95e-42 159
Msa0239540 MtrunA17_Chr7g0245031 39.216 153 91 1 201 353 143 293 1.83e-26 113
Msa0239540 MtrunA17_Chr7g0245031 44.144 111 59 2 440 549 301 409 5.19e-20 93.6
Msa0239540 MtrunA17_Chr4g0059751 36.420 162 90 3 201 353 84 241 9.36e-25 107
Msa0239540 MtrunA17_Chr4g0059751 39.286 112 65 2 440 550 249 358 1.03e-20 95.1
Msa0239540 MtrunA17_Chr1g0197721 36.552 145 90 1 206 350 51 193 1.34e-23 104
Msa0239540 MtrunA17_Chr1g0197721 34.783 138 84 3 424 560 202 334 1.73e-13 73.2
Msa0239540 MtrunA17_Chr3g0125381 41.071 112 62 1 434 545 100 207 7.04e-21 91.7
Msa0239540 MtrunA17_Chr3g0125381 32.000 100 66 1 256 355 2 99 7.91e-11 62.4
Msa0239540 MtrunA17_Chr2g0286501 35.714 154 89 4 203 355 46 190 4.88e-19 92.0
Msa0239540 MtrunA17_Chr3g0140631 33.553 152 99 1 203 354 34 183 9.50e-19 87.4
Msa0239540 MtrunA17_Chr3g0140631 35.185 108 66 1 437 544 185 288 4.44e-15 76.3
Msa0239540 MtrunA17_Chr8g0351491 31.481 162 107 2 195 355 5 163 7.23e-18 84.3
Msa0239540 MtrunA17_Chr8g0351491 39.806 103 58 1 443 545 170 268 1.31e-15 77.4
Msa0239540 MtrunA17_Chr7g0272841 30.645 186 116 4 206 386 68 245 4.12e-17 85.1
Msa0239540 MtrunA17_Chr2g0284031 29.630 189 119 3 200 388 25 199 1.45e-16 82.8
Msa0239540 MtrunA17_Chr8g0353621 31.013 158 107 1 198 355 2 157 3.21e-16 79.3
Msa0239540 MtrunA17_Chr8g0353621 39.604 101 57 1 443 543 164 260 2.89e-15 76.3
Msa0239540 MtrunA17_Chr8g0379091 28.302 212 131 4 177 388 4 194 4.72e-16 81.3
Msa0239540 MtrunA17_Chr4g0025671 29.221 154 103 3 203 353 5 155 5.94e-16 82.0
Msa0239540 MtrunA17_Chr1g0190831 29.412 153 104 3 203 353 1 151 8.44e-16 80.9
Msa0239540 MtrunA17_Chr2g0321841 29.221 154 103 3 203 353 1 151 9.86e-16 81.3
Msa0239540 MtrunA17_Chr4g0013131 30.573 157 106 1 197 353 3 156 1.29e-15 79.7
Msa0239540 MtrunA17_Chr6g0486661 34.884 129 76 4 437 560 909 1034 3.32e-15 79.3
Msa0239540 MtrunA17_Chr3g0107051 30.108 186 116 4 203 388 18 189 3.43e-15 78.2
Msa0239540 MtrunA17_Chr1g0205421 31.013 158 102 3 197 352 3 155 1.36e-14 76.6
Msa0239540 MtrunA17_Chr1g0173921 26.316 152 110 2 203 353 1 151 1.73e-14 77.0
Msa0239540 MtrunA17_Chr5g0432491 32.450 151 100 2 203 353 20 168 1.89e-14 75.9
Msa0239540 MtrunA17_Chr7g0260191 27.451 153 107 3 203 353 1 151 1.90e-14 76.6
Msa0239540 MtrunA17_Chr3g0114511 24.409 254 176 5 198 440 24 272 2.03e-14 75.9
Msa0239540 MtrunA17_Chr3g0132591 33.146 178 95 4 212 388 118 272 2.04e-14 75.9
Msa0239540 MtrunA17_Chr1g0188031 30.189 159 95 4 203 353 17 167 2.54e-14 75.5
Msa0239540 MtrunA17_Chr3g0107011 28.495 186 119 4 203 388 11 182 3.56e-14 75.1
Msa0239540 MtrunA17_Chr7g0258051 26.923 156 108 3 203 355 13 165 3.85e-14 75.5
Msa0239540 MtrunA17_Chr2g0302431 30.247 162 111 2 192 353 6 165 3.95e-14 75.1
Msa0239540 MtrunA17_Chr8g0346071 25.616 203 131 4 186 388 2 184 8.50e-14 73.9
Msa0239540 MtrunA17_Chr2g0304111 28.000 150 106 2 204 353 21 168 1.34e-13 73.6
Msa0239540 MtrunA17_Chr1g0200601 32.335 167 101 5 192 354 22 180 1.37e-13 73.6
Msa0239540 MtrunA17_Chr1g0170551 32.075 106 66 2 443 548 162 261 1.71e-13 73.9
Msa0239540 MtrunA17_Chr1g0170551 30.178 169 110 4 206 373 7 168 1.77e-12 70.9
Msa0239540 MtrunA17_Chr1g0185221 29.032 155 102 4 203 353 1 151 1.97e-13 73.2
Msa0239540 MtrunA17_Chr4g0074111 26.486 185 122 3 204 388 16 186 2.27e-13 72.4
Msa0239540 MtrunA17_Chr5g0419441 27.545 167 116 3 206 372 239 400 2.68e-13 73.2
Msa0239540 MtrunA17_Chr1g0205931 27.174 184 117 4 194 372 53 224 3.23e-13 72.8
Msa0239540 MtrunA17_Chr1g0202831 31.788 151 89 5 210 353 415 558 4.31e-13 72.4
Msa0239540 MtrunA17_Chr7g0244521 28.947 190 121 5 199 388 5 180 5.58e-13 71.6
Msa0239540 MtrunA17_Chr1g0203881 32.895 152 96 3 206 353 41 190 7.12e-13 71.2
Msa0239540 MtrunA17_Chr4g0074811 33.516 182 109 8 206 378 91 269 7.69e-13 71.2
Msa0239540 MtrunA17_Chr1g0166101 30.263 152 103 2 203 353 21 170 7.73e-13 70.9
Msa0239540 MtrunA17_Chr8g0385341 30.719 153 100 3 206 354 30 180 7.88e-13 71.2
Msa0239540 MtrunA17_Chr7g0274941 31.293 147 96 3 206 350 16 159 8.39e-13 69.3
Msa0239540 MtrunA17_Chr5g0432471 27.815 151 106 2 203 353 9 156 9.15e-13 70.9
Msa0239540 MtrunA17_Chr4g0047191 34.653 101 66 0 253 353 94 194 1.01e-12 70.1
Msa0239540 MtrunA17_Chr4g0047211 34.653 101 66 0 253 353 89 189 1.29e-12 69.7
Msa0239540 MtrunA17_Chr5g0428031 26.490 151 109 2 203 353 6 154 1.47e-12 70.1
Msa0239540 MtrunA17_Chr1g0176421 30.939 181 115 5 206 378 161 339 1.98e-12 70.1
Msa0239540 MtrunA17_Chr7g0256001 31.902 163 101 5 205 360 140 299 2.04e-12 70.1
Msa0239540 MtrunA17_Chr8g0346081 25.000 172 122 2 195 366 11 175 2.28e-12 69.3
Msa0239540 MtrunA17_Chr4g0008561 34.615 104 62 3 443 544 177 276 4.43e-12 69.3
Msa0239540 MtrunA17_Chr2g0284011 29.167 192 118 7 199 388 5 180 4.61e-12 68.6
Msa0239540 MtrunA17_Chr5g0448721 29.940 167 113 4 206 370 96 260 5.39e-12 68.6
Msa0239540 MtrunA17_Chr3g0130151 29.605 152 103 2 204 353 242 391 5.42e-12 68.9
Msa0239540 MtrunA17_Chr8g0386981 29.861 144 97 2 212 353 414 555 7.93e-12 68.6
Msa0239540 MtrunA17_Chr2g0276831 32.727 165 96 6 210 367 14 170 8.25e-12 67.4
Msa0239540 MtrunA17_Chr1g0190131 28.082 146 101 2 206 350 9 151 9.89e-12 65.9
Msa0239540 MtrunA17_Chr1g0173541 31.447 159 105 4 181 338 28 183 1.27e-11 67.4
Msa0239540 MtrunA17_Chr3g0091311 28.846 156 108 2 198 353 4 156 1.30e-11 65.5
Msa0239540 MtrunA17_Chr1g0188991 26.316 190 125 4 206 394 15 190 1.57e-11 67.4
Msa0239540 MtrunA17_Chr4g0063881 27.152 151 108 1 203 353 8 156 1.88e-11 66.6
Msa0239540 MtrunA17_Chr2g0317001 27.703 148 103 2 206 353 15 158 1.90e-11 67.0
Msa0239540 MtrunA17_Chr5g0441691 30.065 153 101 4 206 354 68 218 2.00e-11 66.6
Msa0239540 MtrunA17_Chr8g0384301 29.114 158 108 2 198 353 291 446 2.13e-11 67.0
Msa0239540 MtrunA17_Chr1g0170281 30.719 153 100 4 206 354 118 268 2.20e-11 66.6
Msa0239540 MtrunA17_Chr5g0441011 29.412 153 102 3 203 353 10 158 3.52e-11 65.9
Msa0239540 MtrunA17_Chr4g0000431 29.870 154 104 3 201 353 19 169 4.16e-11 65.9
Msa0239540 MtrunA17_Chr4g0038501 24.020 204 146 3 206 409 20 214 4.35e-11 66.2
Msa0239540 MtrunA17_Chr8g0374701 31.013 158 97 6 201 353 131 281 6.81e-11 65.1
Msa0239540 MtrunA17_Chr2g0299991 28.395 162 109 4 194 353 58 214 7.12e-11 64.3
Msa0239540 MtrunA17_Chr8g0388891 23.188 276 184 10 83 353 29 281 7.13e-11 64.3
Msa0239540 MtrunA17_Chr0c02g0489761 30.065 153 101 4 206 354 78 228 7.23e-11 65.1
Msa0239540 MtrunA17_Chr4g0045261 30.935 139 86 4 201 338 143 272 7.54e-11 65.1
Msa0239540 MtrunA17_Chr4g0001331 29.054 148 102 2 206 353 20 164 9.26e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239540 AT5G47750.1 77.544 570 103 9 42 604 35 586 0.0 859
Msa0239540 AT4G26610.1 72.316 531 116 7 80 604 1 506 0.0 761
Msa0239540 AT5G55910.2 74.706 510 99 8 109 604 5 498 0.0 741
Msa0239540 AT5G55910.1 74.706 510 99 8 109 604 5 498 0.0 741
Msa0239540 AT2G44830.2 63.762 505 160 9 115 604 269 765 0.0 645
Msa0239540 AT2G44830.3 63.762 505 160 9 115 604 269 765 0.0 645
Msa0239540 AT2G44830.1 63.762 505 160 9 115 604 269 765 0.0 645
Msa0239540 AT3G27580.2 64.660 515 160 10 103 604 73 578 0.0 625
Msa0239540 AT3G27580.1 64.660 515 160 10 103 604 73 578 0.0 625
Msa0239540 AT5G40030.1 59.921 504 181 10 106 604 12 499 0.0 589
Msa0239540 AT1G79250.1 64.588 449 138 7 172 604 112 555 0.0 573
Msa0239540 AT1G79250.3 64.588 449 138 7 172 604 112 555 0.0 573
Msa0239540 AT1G79250.2 64.588 449 138 7 172 604 112 555 0.0 573
Msa0239540 AT1G79250.4 64.588 449 138 7 172 604 112 555 0.0 573
Msa0239540 AT3G52890.2 56.522 529 191 10 89 604 432 934 0.0 572
Msa0239540 AT3G52890.4 56.522 529 191 10 89 604 432 934 0.0 572
Msa0239540 AT3G52890.1 56.522 529 191 10 89 604 432 934 0.0 572
Msa0239540 AT3G52890.3 56.522 529 191 10 89 604 432 934 0.0 572
Msa0239540 AT5G03640.2 53.184 534 185 9 100 604 429 926 0.0 558
Msa0239540 AT5G03640.1 53.184 534 185 9 100 604 429 926 0.0 558
Msa0239540 AT3G12690.1 67.250 400 113 4 179 578 158 539 0.0 553
Msa0239540 AT3G12690.3 67.250 400 113 4 179 578 158 539 0.0 553
Msa0239540 AT3G12690.2 67.250 400 113 4 179 578 158 539 0.0 553
Msa0239540 AT2G36350.1 58.030 467 179 6 142 604 496 949 0.0 549
Msa0239540 AT1G16440.1 62.929 437 128 9 179 604 86 499 0.0 541
Msa0239540 AT2G26700.1 47.490 478 188 9 161 585 32 499 2.77e-140 418
Msa0239540 AT3G44610.1 56.319 364 133 7 206 554 71 423 3.35e-135 402
Msa0239540 AT2G34650.1 46.993 449 176 12 158 578 12 426 4.59e-129 386
Msa0239540 AT3G14370.1 44.307 404 179 6 181 575 61 427 3.11e-111 342
Msa0239540 AT5G58140.6 45.144 381 158 5 180 560 551 880 7.09e-107 343
Msa0239540 AT5G58140.7 45.144 381 158 5 180 560 551 880 7.09e-107 343
Msa0239540 AT5G58140.5 45.144 381 158 5 180 560 551 880 7.09e-107 343
Msa0239540 AT5G58140.2 45.144 381 158 5 180 560 551 880 7.09e-107 343
Msa0239540 AT5G58140.1 45.144 381 158 5 180 560 551 880 7.09e-107 343
Msa0239540 AT5G58140.3 45.455 374 153 5 180 553 551 873 3.46e-105 338
Msa0239540 AT1G53700.1 43.735 407 180 8 181 577 66 433 5.79e-102 318
Msa0239540 AT3G45780.2 40.394 406 192 4 156 560 612 968 4.65e-91 302
Msa0239540 AT3G45780.1 40.394 406 192 4 156 560 612 968 4.65e-91 302
Msa0239540 AT1G51170.1 39.142 373 186 11 200 561 16 358 1.44e-73 241
Msa0239540 AT4G13000.1 36.412 379 184 11 200 567 14 346 5.44e-68 226
Msa0239540 AT3G25250.1 34.392 378 191 9 200 561 11 347 1.48e-66 223
Msa0239540 AT3G20830.1 38.070 373 190 10 201 561 16 359 3.80e-66 222
Msa0239540 AT1G45160.2 33.967 368 184 7 201 564 665 977 2.85e-53 197
Msa0239540 AT1G45160.1 33.967 368 184 7 201 564 665 977 5.41e-53 196
Msa0239540 AT3G17850.1 34.444 360 178 9 194 549 871 1176 2.72e-52 194
Msa0239540 AT5G62310.1 32.464 345 182 6 206 549 754 1048 2.10e-51 191
Msa0239540 AT1G30640.3 30.846 402 222 12 191 577 12 372 6.61e-51 182
Msa0239540 AT1G30640.2 30.846 402 222 12 191 577 105 465 7.68e-51 184
Msa0239540 AT1G30640.1 30.846 402 222 12 191 577 105 465 7.68e-51 184
Msa0239540 AT4G33080.2 29.426 418 241 12 174 573 59 440 8.11e-50 181
Msa0239540 AT4G33080.1 29.426 418 241 12 174 573 59 440 1.04e-49 181
Msa0239540 AT5G09890.2 31.139 395 220 10 192 575 88 441 3.87e-47 173
Msa0239540 AT5G09890.1 31.139 395 220 10 192 575 88 441 4.04e-47 173
Msa0239540 AT2G20470.3 30.691 391 210 11 192 569 110 452 4.57e-46 171
Msa0239540 AT2G20470.2 30.691 391 210 11 192 569 110 452 1.09e-45 170
Msa0239540 AT2G20470.1 30.691 391 210 11 192 569 110 452 1.09e-45 170
Msa0239540 AT3G23310.1 27.193 456 283 10 114 563 28 440 2.76e-45 169
Msa0239540 AT4G14350.2 26.872 454 283 9 115 563 28 437 3.89e-44 166
Msa0239540 AT4G14350.1 26.872 454 283 9 115 563 28 437 3.89e-44 166
Msa0239540 AT4G14350.4 26.872 454 283 9 115 563 28 437 3.89e-44 166
Msa0239540 AT4G14350.3 26.872 454 283 9 115 563 28 437 4.40e-44 166
Msa0239540 AT2G19400.1 30.541 370 218 9 185 549 84 419 6.85e-42 159
Msa0239540 AT1G03920.2 30.053 376 215 9 192 563 10 341 1.28e-41 157
Msa0239540 AT1G03920.1 30.053 376 215 9 192 563 123 454 1.36e-41 159
Msa0239540 AT1G03920.3 30.053 376 215 9 192 563 123 454 1.36e-41 159
Msa0239540 AT5G58140.4 46.565 131 70 0 180 310 551 681 5.66e-32 132
Msa0239540 AT3G08720.1 39.355 155 92 1 199 353 133 285 3.90e-27 115
Msa0239540 AT3G08720.1 37.037 162 97 4 438 597 291 449 1.53e-24 107
Msa0239540 AT3G08720.3 39.355 155 92 1 199 353 133 285 3.90e-27 115
Msa0239540 AT3G08720.3 37.037 162 97 4 438 597 291 449 1.53e-24 107
Msa0239540 AT3G08720.4 39.355 155 92 1 199 353 133 285 3.90e-27 115
Msa0239540 AT3G08720.4 37.037 162 97 4 438 597 291 449 1.53e-24 107
Msa0239540 AT3G08720.2 39.355 155 92 1 199 353 133 285 3.90e-27 115
Msa0239540 AT3G08720.2 37.037 162 97 4 438 597 291 449 1.53e-24 107
Msa0239540 AT3G08730.1 38.710 155 93 1 199 353 127 279 1.27e-26 114
Msa0239540 AT3G08730.1 46.903 113 56 3 438 549 285 394 9.11e-25 108
Msa0239540 AT3G08730.2 38.710 155 93 1 199 353 127 279 1.27e-26 114
Msa0239540 AT3G08730.2 46.903 113 56 3 438 549 285 394 9.11e-25 108
Msa0239540 AT1G48490.3 42.222 135 71 3 421 549 983 1116 3.78e-25 111
Msa0239540 AT1G48490.3 36.250 160 99 2 194 353 817 973 2.36e-24 108
Msa0239540 AT1G48490.2 42.222 135 71 3 421 549 983 1116 3.78e-25 111
Msa0239540 AT1G48490.2 36.250 160 99 2 194 353 817 973 2.36e-24 108
Msa0239540 AT1G48490.1 42.222 135 71 3 421 549 983 1116 3.78e-25 111
Msa0239540 AT1G48490.1 36.250 160 99 2 194 353 817 973 2.36e-24 108
Msa0239540 AT1G48490.4 42.222 135 71 3 421 549 984 1117 3.85e-25 111
Msa0239540 AT1G48490.4 36.250 160 99 2 194 353 818 974 2.30e-24 109
Msa0239540 AT5G18700.1 38.411 151 85 3 203 353 1 143 4.28e-23 105
Msa0239540 AT5G04510.2 35.172 145 92 1 206 350 44 186 6.71e-23 102
Msa0239540 AT5G04510.2 34.194 155 88 4 424 577 195 336 2.53e-19 91.3
Msa0239540 AT5G04510.3 35.172 145 92 1 206 350 44 186 9.14e-23 99.8
Msa0239540 AT5G04510.1 35.172 145 92 1 206 350 44 186 9.69e-23 102
Msa0239540 AT5G04510.1 34.416 154 87 4 425 577 196 336 2.48e-19 92.0
Msa0239540 AT3G10540.1 34.483 145 93 1 206 350 45 187 8.65e-22 99.4
Msa0239540 AT3G10540.1 34.416 154 87 4 425 577 197 337 3.36e-19 91.3
Msa0239540 AT2G20050.1 40.517 116 63 4 440 552 934 1046 2.36e-18 90.1
Msa0239540 AT2G20050.2 40.517 116 63 4 440 552 931 1043 2.39e-18 90.1
Msa0239540 AT2G45490.2 33.333 153 100 2 203 355 19 169 3.15e-18 85.1
Msa0239540 AT2G45490.2 40.506 79 47 0 443 521 176 254 6.16e-12 66.6
Msa0239540 AT2G45490.1 33.333 153 100 2 203 355 19 169 3.20e-18 85.9
Msa0239540 AT2G45490.1 41.176 102 56 1 443 544 176 273 2.03e-17 83.6
Msa0239540 AT1G12680.1 34.416 154 91 3 210 362 111 255 4.48e-18 87.8
Msa0239540 AT3G61960.1 25.215 349 167 12 203 544 7 268 6.67e-18 87.8
Msa0239540 AT3G61960.2 25.223 337 162 11 203 532 7 260 1.01e-17 87.4
Msa0239540 AT3G06030.1 32.039 206 115 7 187 386 59 245 1.04e-17 87.4
Msa0239540 AT4G18700.1 29.381 194 123 3 195 388 15 194 2.74e-17 85.5
Msa0239540 AT1G29230.1 28.866 194 124 3 195 388 63 242 6.67e-17 84.3
Msa0239540 AT5G45810.1 28.571 189 121 3 200 388 22 196 9.34e-17 84.0
Msa0239540 AT2G25880.1 32.886 149 98 1 206 354 25 171 9.48e-17 81.6
Msa0239540 AT2G25880.1 37.963 108 63 1 437 544 173 276 5.18e-16 79.3
Msa0239540 AT2G25880.4 32.886 149 98 1 206 354 38 184 1.38e-16 81.3
Msa0239540 AT2G25880.4 37.963 108 63 1 437 544 186 289 5.52e-16 79.3
Msa0239540 AT4G32830.1 33.553 152 99 1 203 354 28 177 1.96e-16 80.9
Msa0239540 AT4G32830.1 36.111 108 65 1 437 544 179 282 3.71e-15 77.0
Msa0239540 AT2G25880.3 32.886 149 98 1 206 354 86 232 2.53e-16 81.3
Msa0239540 AT2G25880.3 38.318 107 62 1 437 543 234 336 1.23e-15 79.3
Msa0239540 AT2G25880.2 37.963 108 63 1 437 544 141 244 2.81e-16 79.7
Msa0239540 AT1G09000.1 29.570 186 118 4 206 386 69 246 4.34e-16 82.4
Msa0239540 AT1G54960.1 31.351 185 108 6 194 372 66 237 4.59e-16 82.4
Msa0239540 AT1G54960.2 31.351 185 108 6 194 372 66 237 4.59e-16 82.4
Msa0239540 AT1G09000.2 29.570 186 118 4 206 386 69 246 4.60e-16 82.0
Msa0239540 AT3G04810.2 29.412 153 104 3 203 353 1 151 4.64e-16 82.0
Msa0239540 AT3G04810.1 29.412 153 104 3 203 353 1 151 4.64e-16 82.0
Msa0239540 AT3G04810.3 29.412 153 104 3 203 353 1 151 4.64e-16 82.0
Msa0239540 AT1G35670.1 34.132 167 98 5 192 354 18 176 1.36e-15 80.1
Msa0239540 AT5G57630.2 30.573 157 102 3 199 353 5 156 1.59e-15 79.3
Msa0239540 AT5G57630.1 30.573 157 102 3 199 353 5 156 1.99e-15 79.3
Msa0239540 AT3G44200.2 29.032 155 102 4 203 353 5 155 3.10e-15 80.1
Msa0239540 AT3G44200.1 29.032 155 102 4 203 353 5 155 3.10e-15 80.1
Msa0239540 AT1G54510.4 30.323 155 100 4 203 353 1 151 4.51e-15 79.0
Msa0239540 AT1G54510.2 30.323 155 100 4 203 353 1 151 4.51e-15 79.0
Msa0239540 AT1G54510.1 30.323 155 100 4 203 353 1 151 4.51e-15 79.0
Msa0239540 AT1G54510.3 30.323 155 100 4 203 353 1 151 4.51e-15 79.0
Msa0239540 AT5G28290.1 29.412 153 104 3 203 353 1 151 5.21e-15 78.6
Msa0239540 AT5G28290.2 29.412 153 104 3 203 353 1 151 5.21e-15 78.6
Msa0239540 AT5G28290.3 29.412 153 104 3 203 353 1 151 5.40e-15 78.6
Msa0239540 AT5G10930.1 30.688 189 112 8 203 388 9 181 5.82e-15 78.2
Msa0239540 AT3G63280.2 27.451 153 107 3 203 353 1 151 9.18e-15 77.8
Msa0239540 AT3G63280.3 27.451 153 107 3 203 353 1 151 9.18e-15 77.8
Msa0239540 AT3G63280.1 27.451 153 107 3 203 353 1 151 9.18e-15 77.8
Msa0239540 AT2G30360.1 31.579 152 101 2 203 353 18 167 1.19e-14 77.0
Msa0239540 AT3G63280.4 27.451 153 107 3 203 353 55 205 2.12e-14 77.0
Msa0239540 AT2G25090.1 30.625 160 106 4 196 353 5 161 2.46e-14 76.3
Msa0239540 AT2G34180.1 27.835 194 126 3 195 388 46 225 2.91e-14 76.3
Msa0239540 AT3G17510.1 32.450 151 100 2 203 353 17 165 3.37e-14 75.5
Msa0239540 AT4G24400.1 26.829 164 118 2 203 366 6 167 8.74e-14 74.3
Msa0239540 AT4G24400.2 26.829 164 118 2 203 366 6 167 1.22e-13 73.6
Msa0239540 AT3G23000.1 29.375 160 94 4 203 353 22 171 1.93e-13 73.2
Msa0239540 AT4G09570.1 32.927 164 98 5 195 354 20 175 2.04e-13 73.6
Msa0239540 AT4G14580.1 30.769 156 105 3 199 353 14 167 2.81e-13 72.8
Msa0239540 AT5G25110.1 26.344 186 123 4 203 388 40 211 4.39e-13 72.4
Msa0239540 AT5G21326.1 31.373 153 99 4 203 353 10 158 4.72e-13 72.0
Msa0239540 AT1G50240.3 33.981 103 62 2 443 545 161 257 4.81e-13 73.2
Msa0239540 AT1G50240.3 29.885 174 114 4 201 373 1 167 1.02e-12 72.0
Msa0239540 AT1G50240.2 33.981 103 62 2 443 545 161 257 4.81e-13 73.2
Msa0239540 AT1G50240.2 29.885 174 114 4 201 373 1 167 1.02e-12 72.0
Msa0239540 AT5G01820.1 34.375 160 97 4 196 353 13 166 5.31e-13 72.0
Msa0239540 AT5G45820.1 29.299 157 108 2 197 353 3 156 5.43e-13 71.6
Msa0239540 AT3G01090.2 29.801 151 104 2 203 353 39 187 6.57e-13 72.0
Msa0239540 AT3G01090.3 29.801 151 104 2 203 353 16 164 7.37e-13 71.6
Msa0239540 AT3G01090.1 29.801 151 104 2 203 353 16 164 7.37e-13 71.6
Msa0239540 AT5G01810.1 30.412 194 117 6 197 388 3 180 8.28e-13 71.2
Msa0239540 AT5G01810.2 30.412 194 117 6 197 388 3 180 8.28e-13 71.2
Msa0239540 AT4G26070.4 29.949 197 118 7 172 353 20 211 8.37e-13 70.5
Msa0239540 AT4G26070.1 31.481 162 104 5 194 353 56 212 9.02e-13 70.1
Msa0239540 AT1G30270.1 29.412 153 102 3 203 353 28 176 9.34e-13 71.2
Msa0239540 AT5G01810.3 30.412 194 117 6 197 388 3 180 9.35e-13 70.5
Msa0239540 AT2G46700.1 34.127 126 78 3 232 353 172 296 1.13e-12 71.2
Msa0239540 AT4G26070.5 31.481 162 104 5 194 353 43 199 1.15e-12 70.1
Msa0239540 AT4G26070.2 31.481 162 104 5 194 353 56 212 1.16e-12 70.1
Msa0239540 AT4G26070.3 31.481 162 104 5 194 353 56 212 1.16e-12 70.1
Msa0239540 AT2G35890.2 26.446 242 165 7 127 360 50 286 1.43e-12 70.9
Msa0239540 AT2G35890.1 26.446 242 165 7 127 360 50 286 1.43e-12 70.9
Msa0239540 AT1G30270.2 29.412 153 102 3 203 353 28 176 1.48e-12 70.5
Msa0239540 AT4G04720.2 30.719 153 100 3 206 354 80 230 1.55e-12 70.9
Msa0239540 AT4G04720.1 30.719 153 100 3 206 354 80 230 1.55e-12 70.9
Msa0239540 AT2G38490.1 33.766 154 93 4 203 353 25 172 1.77e-12 70.1
Msa0239540 AT1G50700.3 32.680 153 97 4 206 354 73 223 2.28e-12 70.1
Msa0239540 AT3G29160.3 29.801 151 104 2 203 353 17 165 2.31e-12 69.3
Msa0239540 AT2G41860.1 32.026 153 98 4 206 354 54 204 2.43e-12 70.1
Msa0239540 AT2G41860.2 32.026 153 98 4 206 354 54 204 2.50e-12 70.1
Msa0239540 AT5G39440.1 31.788 151 101 2 203 353 16 164 2.89e-12 69.7
Msa0239540 AT1G53570.6 28.049 164 114 2 202 363 210 371 2.94e-12 69.7
Msa0239540 AT1G53570.7 28.049 164 114 2 202 363 210 371 2.94e-12 69.7
Msa0239540 AT5G35410.2 27.815 151 107 2 203 353 8 156 3.38e-12 68.9
Msa0239540 AT1G53570.2 28.049 164 114 2 202 363 210 371 3.60e-12 69.7
Msa0239540 AT1G53570.3 28.049 164 114 2 202 363 210 371 3.60e-12 69.7
Msa0239540 AT1G53570.1 28.049 164 114 2 202 363 210 371 3.60e-12 69.7
Msa0239540 AT3G29160.1 29.801 151 104 2 203 353 17 165 3.63e-12 69.3
Msa0239540 AT3G29160.2 29.801 151 104 2 203 353 17 165 3.63e-12 69.3
Msa0239540 AT1G53570.4 28.049 164 114 2 202 363 210 371 3.79e-12 69.7
Msa0239540 AT1G50700.1 33.333 153 96 5 206 354 73 223 3.90e-12 69.3
Msa0239540 AT3G20410.2 32.680 153 97 5 206 354 91 241 4.27e-12 69.3
Msa0239540 AT3G20410.1 32.680 153 97 5 206 354 91 241 4.27e-12 69.3
Msa0239540 AT4G29810.2 28.571 210 136 6 147 353 25 223 4.46e-12 68.6
Msa0239540 AT4G29810.3 28.571 210 136 6 147 353 25 223 5.47e-12 67.8
Msa0239540 AT2G26980.3 28.758 153 103 4 203 353 11 159 5.55e-12 68.6
Msa0239540 AT1G50700.2 33.333 153 96 5 206 354 73 223 5.71e-12 68.9
Msa0239540 AT3G50310.1 26.768 198 124 6 253 435 48 239 5.90e-12 67.8
Msa0239540 AT2G26980.1 28.758 153 103 4 203 353 11 159 6.23e-12 68.2
Msa0239540 AT2G26980.4 28.758 153 103 4 203 353 21 169 6.44e-12 68.6
Msa0239540 AT5G35410.1 27.815 151 107 2 203 353 8 156 6.73e-12 68.6
Msa0239540 AT1G69220.1 29.054 148 102 2 206 353 249 393 7.01e-12 68.9
Msa0239540 AT3G20860.1 24.503 151 113 1 203 353 1 150 7.52e-12 68.2
Msa0239540 AT1G73500.1 32.298 161 90 6 209 365 50 195 7.68e-12 67.0
Msa0239540 AT4G29810.1 30.723 166 110 4 189 353 53 214 7.71e-12 67.8
Msa0239540 AT2G26980.5 28.758 153 103 4 203 353 11 159 1.06e-11 67.8
Msa0239540 AT3G10660.2 30.387 181 116 5 206 378 186 364 1.09e-11 68.2
Msa0239540 AT3G10660.1 30.387 181 116 5 206 378 186 364 1.09e-11 68.2
Msa0239540 AT5G58380.1 30.282 142 96 2 212 353 18 156 1.17e-11 67.8
Msa0239540 AT2G26980.2 28.758 153 103 4 203 353 11 159 1.23e-11 65.9
Msa0239540 AT4G35310.2 29.341 167 114 4 206 370 97 261 1.34e-11 67.8
Msa0239540 AT4G35310.1 29.341 167 114 4 206 370 97 261 1.34e-11 67.8
Msa0239540 AT4G14480.1 28.859 149 103 2 206 353 15 161 1.40e-11 67.4
Msa0239540 AT5G58950.1 28.814 118 79 2 238 353 243 357 1.69e-11 67.4
Msa0239540 AT4G24100.1 28.302 159 112 1 195 353 22 178 1.72e-11 67.8
Msa0239540 AT4G24100.2 28.302 159 112 1 195 353 22 178 1.92e-11 67.4
Msa0239540 AT5G24430.1 29.936 157 102 4 204 353 141 296 2.11e-11 67.4
Msa0239540 AT1G01140.1 26.347 167 116 3 187 353 5 164 2.22e-11 66.6
Msa0239540 AT2G17890.1 30.405 148 99 2 210 353 112 259 2.23e-11 67.0
Msa0239540 AT1G01140.2 26.347 167 116 3 187 353 5 164 2.25e-11 66.6
Msa0239540 AT4G24100.4 28.302 159 112 1 195 353 38 194 2.29e-11 67.4
Msa0239540 AT1G01140.3 26.347 167 116 3 187 353 5 164 2.33e-11 66.6
Msa0239540 AT3G57530.1 33.582 134 86 3 206 338 63 194 2.39e-11 67.0
Msa0239540 AT1G53165.1 27.517 149 101 3 205 353 17 158 2.47e-11 67.0
Msa0239540 AT1G53165.2 27.517 149 101 3 205 353 17 158 2.52e-11 67.0
Msa0239540 AT4G24100.3 28.302 159 112 1 195 353 38 194 2.53e-11 67.0
Msa0239540 AT2G01820.1 33.529 170 98 7 190 352 574 735 2.62e-11 67.4
Msa0239540 AT1G53165.3 27.517 149 101 3 205 353 17 158 2.64e-11 67.0
Msa0239540 AT2G17290.1 30.573 157 105 4 206 360 85 239 2.73e-11 66.6
Msa0239540 AT2G17290.2 30.573 157 105 4 206 360 85 239 2.73e-11 66.6
Msa0239540 AT5G66210.6 28.758 153 105 2 205 353 61 213 2.76e-11 66.6
Msa0239540 AT5G66210.4 28.758 153 105 2 205 353 61 213 2.76e-11 66.6
Msa0239540 AT5G66210.3 28.758 153 105 2 205 353 61 213 3.31e-11 66.2
Msa0239540 AT3G57530.2 32.026 153 98 4 206 354 63 213 3.88e-11 65.9
Msa0239540 AT5G66210.5 28.758 153 105 2 205 353 61 213 4.45e-11 65.9
Msa0239540 AT5G66210.1 28.758 153 105 2 205 353 61 213 4.51e-11 66.2
Msa0239540 AT5G66210.2 28.758 153 105 2 205 353 61 213 4.51e-11 66.2
Msa0239540 AT1G32320.1 32.192 146 89 3 209 353 51 187 4.81e-11 64.7
Msa0239540 AT5G19360.1 30.065 153 101 4 206 354 68 218 4.96e-11 65.9
Msa0239540 AT5G12180.1 30.065 153 101 4 206 354 73 223 6.50e-11 65.5
Msa0239540 AT1G48260.1 30.464 151 103 2 203 353 8 156 7.07e-11 65.1
Msa0239540 AT4G36070.1 27.451 153 107 2 205 353 70 222 9.89e-11 65.1

Find 195 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCACCCTTGATTATTTC+AGG 0.111224 2_2:+14003101 None:intergenic
TAACCAGTATTCTTTCTTAA+AGG 0.161732 2_2:+14003344 None:intergenic
AATCAGATTGACCAAATTAA+TGG 0.186329 2_2:+14005401 None:intergenic
GTTTGGCAAAACTCCGTTTA+AGG 0.192811 2_2:-14003024 Msa0239540:CDS
TGGGTCTCTCTCTTTCTCTT+TGG 0.209525 2_2:-14006631 Msa0239540:five_prime_UTR
TCTCTATGAGTTCAGTAATT+TGG 0.211516 2_2:+14002308 None:intergenic
GAGGAGGGAAATTGCATATT+TGG 0.239497 2_2:-14002415 Msa0239540:three_prime_UTR
TTGCAGCAAGGGATCTTATC+AGG 0.245422 2_2:-14002926 Msa0239540:CDS
TGATGAAGGAAACATGAATT+AGG 0.247468 2_2:+14006591 None:intergenic
ATGGAAAGTGAAACGTTAAA+AGG 0.255861 2_2:+14006686 None:intergenic
TTGATTGCCAAGTTCGGTTT+TGG 0.277363 2_2:+14003205 None:intergenic
TCTTCTCTCTTGGTAGCTTT+AGG 0.290684 2_2:+14006799 None:intergenic
TTGTCAGAACCTTTCTGATT+AGG 0.293830 2_2:+14002690 None:intergenic
TGGATGCTAAACCATTAATT+TGG 0.294130 2_2:-14005412 Msa0239540:five_prime_UTR
AGCCAGAAAATGTTCTTGTT+AGG 0.303331 2_2:-14003460 Msa0239540:CDS
ACTCCATATCTAAGAGTCTT+AGG 0.307722 2_2:-14002386 Msa0239540:three_prime_UTR
GTTGGCTGTGGTGGACTATT+AGG 0.314694 2_2:+14006845 None:intergenic
AAGCTAACAACAGGTGCTTC+TGG 0.322983 2_2:+14002948 None:intergenic
TTCTCAAACTCAACAGCCTT+TGG 0.340147 2_2:+14002777 None:intergenic
GAGATAAACTTGAAGAGAAA+TGG 0.350052 2_2:+14006667 None:intergenic
AGAGATGGTTCATTGGGTTT+AGG 0.357847 2_2:-14004763 Msa0239540:CDS
CAAACTCAGAGGTACTCTTT+TGG 0.359701 2_2:-14006727 Msa0239540:five_prime_UTR
TGCAGTTACATCTTACTAGA+AGG 0.361236 2_2:+14002353 None:intergenic
GCAGTTGATTGGTGGACTTA+TGG 0.362751 2_2:-14003068 Msa0239540:CDS
CTGAGTAGTAAATTCGGTTC+TGG 0.371104 2_2:-14005114 Msa0239540:CDS
AAACAGTGTGGCTCGGTTCC+CGG 0.372295 2_2:+14002998 None:intergenic
AGACTGGGTTGTGGAGATAT+TGG 0.372630 2_2:-14004721 Msa0239540:CDS
TTTCTATACGAGTTGTTGTT+TGG 0.373039 2_2:-14003041 Msa0239540:CDS
CACCCTCTTTCCTTAACAAC+AGG 0.376035 2_2:+14002163 None:intergenic
GTTGTTTCTGCCGAAGAGTA+TGG 0.382638 2_2:+14004479 None:intergenic
AATGTTCTTGTTAGGGATGA+TGG 0.383801 2_2:-14003452 Msa0239540:CDS
CGCCTCAGGTGTTTGAATCC+CGG 0.388498 2_2:+14005299 None:intergenic
GAGCCTTTAAGAAAGAATAC+TGG 0.390255 2_2:-14003347 Msa0239540:CDS
CGCAAGGCCAAAACCGAACT+TGG 0.393613 2_2:-14003212 Msa0239540:CDS
TCGAGATTAGCCTGTTGTTA+AGG 0.401280 2_2:-14002173 Msa0239540:three_prime_UTR
GCTCGCTCTATGTCGTTTGT+TGG 0.402421 2_2:-14003143 Msa0239540:CDS
GCCAGAAAATGTTCTTGTTA+GGG 0.404235 2_2:-14003459 Msa0239540:CDS
TCCCCAGCTGCATCGTCTGC+TGG 0.405197 2_2:-14002747 Msa0239540:CDS
AACTTGAGGTCTTTCGCCTC+AGG 0.406867 2_2:+14005285 None:intergenic
GGTGGAAAAGTGTGGCGAGG+GGG 0.407131 2_2:-14002144 Msa0239540:three_prime_UTR
TTTGGCAAAACTCCGTTTAA+GGG 0.411556 2_2:-14003023 Msa0239540:CDS
GAGAAGTAGCGTTGAAGTAA+TGG 0.414637 2_2:-14002284 Msa0239540:three_prime_UTR
GATGAAGGAAACATGAATTA+GGG 0.416820 2_2:+14006592 None:intergenic
GAACCTAAGACTCTTAGATA+TGG 0.417190 2_2:+14002383 None:intergenic
AAAACTCCGTTTAAGGGATC+CGG 0.419047 2_2:-14003017 Msa0239540:CDS
ATTTATGAAAGTAAGAAGTA+TGG 0.426877 2_2:-14005171 Msa0239540:CDS
TCAAAATGAGTGTACAAAGT+TGG 0.430217 2_2:+14004553 None:intergenic
AGAACTAGAGATGGTTCATT+GGG 0.431145 2_2:-14004769 Msa0239540:CDS
CAAAATGAGTGTACAAAGTT+GGG 0.433137 2_2:+14004554 None:intergenic
ACTGGGCCTGTTGGCTGTGG+TGG 0.434076 2_2:+14006836 None:intergenic
ACAGAGTTAGACAAATCTTC+AGG 0.435268 2_2:+14005225 None:intergenic
CTCATGTCATTTGCTTTGTG+AGG 0.438367 2_2:+14004814 None:intergenic
GACACTGGGCCTGTTGGCTG+TGG 0.443324 2_2:+14006833 None:intergenic
GTATGGTGTTCCGTCTCAAA+AGG 0.447239 2_2:-14005154 Msa0239540:CDS
TCGCTGTCGCTTCAAAAGAC+AGG 0.447517 2_2:-14005258 Msa0239540:CDS
TGCTCAGGAAAATGCTTCCC+TGG 0.448183 2_2:+14004457 None:intergenic
TGTACAAAGTTGGGAGAAAC+GGG 0.451051 2_2:+14004563 None:intergenic
GATTCACTGAGTAGTAAATT+CGG 0.452525 2_2:-14005120 Msa0239540:CDS
AAACAACATCAGAAAACATC+CGG 0.454715 2_2:-14005318 Msa0239540:CDS
TAGAACTAGAGATGGTTCAT+TGG 0.455774 2_2:-14004770 Msa0239540:CDS
AGAGAGAGGTTCTTCTCTCT+TGG 0.455953 2_2:+14006789 None:intergenic
ACTTCGTGCTCAGACGGAAC+GGG 0.456728 2_2:-14004608 Msa0239540:CDS
CTTCAGACTTCTGAAGAGAC+TGG 0.457642 2_2:-14004737 Msa0239540:CDS
GTGCTACTCACTCGAATTGT+CGG 0.459565 2_2:-14002437 Msa0239540:three_prime_UTR
CATGTTAAAAGAACTGCTAA+TGG 0.460236 2_2:-14002459 Msa0239540:three_prime_UTR
TCAACAGCCTTTGGAATCTC+AGG 0.460268 2_2:+14002786 None:intergenic
ACTGACTTGATTGCCAAGTT+CGG 0.462315 2_2:+14003199 None:intergenic
TCGCCAGCAGACGATGCAGC+TGG 0.463955 2_2:+14002744 None:intergenic
TGGAAAGTGAAACGTTAAAA+GGG 0.467021 2_2:+14006687 None:intergenic
AAAGGGATGTTGTTTAATCT+CGG 0.474175 2_2:+14002851 None:intergenic
TAGCCTGTTGTTAAGGAAAG+AGG 0.474271 2_2:-14002166 Msa0239540:three_prime_UTR
CCTTGATTATTTCAGGTGCC+AGG 0.475279 2_2:+14003108 None:intergenic
GTGTACAAAGTTGGGAGAAA+CGG 0.475511 2_2:+14004562 None:intergenic
AACACGTCAAAGCAGAATAT+CGG 0.476349 2_2:-14005198 Msa0239540:CDS
CAATCGACGAGGATTTAACT+AGG 0.477213 2_2:+14003375 None:intergenic
GACGAGGATTTAACTAGGGT+TGG 0.480552 2_2:+14003380 None:intergenic
AATAGTCCACCACAGCCAAC+AGG 0.484204 2_2:-14006842 Msa0239540:five_prime_UTR
TTACGTGGCAGAGGTTCTAC+TGG 0.484633 2_2:-14003528 Msa0239540:CDS
TATCAGGGGTTTGCTTGTAA+AGG 0.485912 2_2:-14002910 Msa0239540:CDS
CTTCTGAAGAGACTGGGTTG+TGG 0.488392 2_2:-14004730 Msa0239540:CDS
TGCATCGTCTGCTGGCGATA+AGG 0.490225 2_2:-14002739 Msa0239540:CDS
TGTTGTTAGCTTTGCAGCAA+GGG 0.490807 2_2:-14002937 Msa0239540:CDS
CTTGCTGCAAAGCTAACAAC+AGG 0.490974 2_2:+14002939 None:intergenic
CATCTCTAGTTCTAACCACT+TGG 0.491662 2_2:+14004779 None:intergenic
GTCACGGCAGTGCAGTTGAT+TGG 0.492673 2_2:-14003079 Msa0239540:CDS
ACAAAGCAAATGACATGAGA+TGG 0.494288 2_2:-14004810 Msa0239540:CDS
AAAGGAACCTCAGCACAGAT+TGG 0.496667 2_2:-14002892 Msa0239540:CDS
AGGGTGGAAAAGTGTGGCGA+GGG 0.499091 2_2:-14002146 Msa0239540:three_prime_UTR
CGGTTCCCGGATCCCTTAAA+CGG 0.499894 2_2:+14003011 None:intergenic
AACACAGGATGGCTGAATGC+AGG 0.500266 2_2:+14003289 None:intergenic
CGCCAGCAGACGATGCAGCT+GGG 0.501809 2_2:+14002745 None:intergenic
CTTGGTGATGGAATTCTGCC+CGG 0.502089 2_2:-14004512 Msa0239540:CDS
CGACATAGAGCGAGCGTCGG+TGG 0.502191 2_2:+14003151 None:intergenic
TACTTCGTGCTCAGACGGAA+CGG 0.503057 2_2:-14004609 Msa0239540:CDS
CCTGGCACCTGAAATAATCA+AGG 0.503319 2_2:-14003108 Msa0239540:CDS
ACTTGTCTTCGCAATACTGC+TGG 0.510223 2_2:+14004966 None:intergenic
ACATACTTCACTGCCTGCTC+AGG 0.512459 2_2:+14004442 None:intergenic
TTGATTTGCTAGAAAAGAGC+CGG 0.515314 2_2:+14003243 None:intergenic
GTGGGCTCTGCAATGAGCTC+AGG 0.515916 2_2:+14003170 None:intergenic
CGCTGTCGCTTCAAAAGACA+GGG 0.521858 2_2:-14005257 Msa0239540:CDS
CACAGATTGGCTTATAAAAG+AGG 0.523225 2_2:-14002879 Msa0239540:CDS
TAGGCTTTAGAGAGAGACAC+TGG 0.524557 2_2:+14006818 None:intergenic
GACATAGAGCGAGCGTCGGT+GGG 0.525943 2_2:+14003152 None:intergenic
TTTAACAAGAAAGAATGAAA+AGG 0.526114 2_2:+14002483 None:intergenic
CAATGAAAGTGATGGACAAA+GGG 0.527725 2_2:-14004654 Msa0239540:CDS
TGCAGCAAGGGATCTTATCA+GGG 0.528637 2_2:-14002925 Msa0239540:CDS
AGTGAAGTCCCAGACAAAAG+TGG 0.532936 2_2:-14002229 Msa0239540:three_prime_UTR
TTGGTGATGGAATTCTGCCC+GGG 0.536932 2_2:-14004511 Msa0239540:CDS
CTCACTCGAATTGTCGGAGG+AGG 0.537536 2_2:-14002431 Msa0239540:three_prime_UTR
TGGAGTACCTACACATGCTC+GGG 0.541979 2_2:-14003502 Msa0239540:CDS
GGCAGAGGTTCTACTGGCAA+TGG 0.545465 2_2:-14003522 Msa0239540:CDS
GGGTGGAAAAGTGTGGCGAG+GGG 0.546089 2_2:-14002145 Msa0239540:three_prime_UTR
GTGGAGACCTCCATACTCTT+CGG 0.546582 2_2:-14004489 Msa0239540:CDS
CTGTTGTTAGCTTTGCAGCA+AGG 0.548555 2_2:-14002938 Msa0239540:CDS
AGCAGTATTGCGAAGACAAG+TGG 0.550813 2_2:-14004964 Msa0239540:CDS
TGGTGTAGCACATCGGATCA+AGG 0.554118 2_2:+14002809 None:intergenic
TGATTTGCTAGAAAAGAGCC+GGG 0.554220 2_2:+14003244 None:intergenic
ATGGAGTACCTACACATGCT+CGG 0.560351 2_2:-14003503 Msa0239540:CDS
AAACTCCGTTTAAGGGATCC+GGG 0.560479 2_2:-14003016 Msa0239540:CDS
ACTCTTCGGCAGAAACAACC+AGG 0.561509 2_2:-14004475 Msa0239540:CDS
GTCTCTTCAGAAGTCTGAAG+TGG 0.563517 2_2:+14004740 None:intergenic
TGTTGGAACTCATGAATACC+TGG 0.564894 2_2:-14003126 Msa0239540:CDS
ACGGCAGTGCAGTTGATTGG+TGG 0.566518 2_2:-14003076 Msa0239540:CDS
TCTAGAAGAAATCAAACTCC+AGG 0.567164 2_2:+14002664 None:intergenic
GAGAGAGACACTGGGCCTGT+TGG 0.567426 2_2:+14006827 None:intergenic
AAGGAGGAAAATGAAAGTGA+TGG 0.570674 2_2:+14006547 None:intergenic
TTCAGACTTCTGAAGAGACT+GGG 0.571581 2_2:-14004736 Msa0239540:CDS
TTATAAGCCAATCTGTGCTG+AGG 0.571793 2_2:+14002885 None:intergenic
GCAGACGATGCAGCTGGGGA+AGG 0.572018 2_2:+14002750 None:intergenic
AGAGTATGGAGGTCTCCACC+CGG 0.575060 2_2:+14004493 None:intergenic
CAAAGCAAATGACATGAGAT+GGG 0.575298 2_2:-14004809 Msa0239540:CDS
TCAACAACTCCTAATCAGAA+AGG 0.579889 2_2:-14002699 Msa0239540:CDS
GGAAAGAGGGTGGAAAAGTG+TGG 0.581120 2_2:-14002152 Msa0239540:three_prime_UTR
CACTCTCAACAAAATCAGCT+CGG 0.581324 2_2:+14004923 None:intergenic
TCTGCAATGAGCTCAGGTAG+AGG 0.583676 2_2:+14003176 None:intergenic
CACATTAACAACGGATGAGG+AGG 0.583759 2_2:+14005089 None:intergenic
AGCCTGTTGTTAAGGAAAGA+GGG 0.585013 2_2:-14002165 Msa0239540:three_prime_UTR
GAAAGGTTCTGACAATTACC+TGG 0.585823 2_2:-14002682 Msa0239540:CDS
TATGGTGTTCCGTCTCAAAA+GGG 0.589404 2_2:-14005153 Msa0239540:CDS
GAAGTTACTTCGTGCTCAGA+CGG 0.590225 2_2:-14004614 Msa0239540:CDS
TTGGACTAACAGCACATCGA+AGG 0.590565 2_2:+14003399 None:intergenic
ATAATCAAGGGTGAAGGTCA+CGG 0.590685 2_2:-14003095 Msa0239540:CDS
TTACTTCGCAATGAAAGTGA+TGG 0.590768 2_2:-14004662 Msa0239540:CDS
TTCTGATTCTTCAAACTCAG+AGG 0.598138 2_2:-14006738 Msa0239540:five_prime_UTR
AATCGACGAGGATTTAACTA+GGG 0.601531 2_2:+14003376 None:intergenic
TCGAAGGGAAAGGTCAAAGT+CGG 0.601750 2_2:+14003415 None:intergenic
GAGGGTGGAAAAGTGTGGCG+AGG 0.603187 2_2:-14002147 Msa0239540:three_prime_UTR
GCAATGAAAGTGATGGACAA+AGG 0.604126 2_2:-14004655 Msa0239540:CDS
CAAGTGGTTAGAACTAGAGA+TGG 0.606500 2_2:-14004778 Msa0239540:CDS
CAAATCAAAGAAAGAACGCA+AGG 0.607512 2_2:-14003228 Msa0239540:CDS
TAACAGCACATCGAAGGGAA+AGG 0.614273 2_2:+14003405 None:intergenic
GCCAGCAGACGATGCAGCTG+GGG 0.614968 2_2:+14002746 None:intergenic
GATGGCGGCTCAATACATGC+AGG 0.614996 2_2:+14003311 None:intergenic
CCACGTTAAACAGTGTGGCT+CGG 0.619994 2_2:+14002991 None:intergenic
GTTTCAAGGAACAGATGATG+AGG 0.620407 2_2:-14002564 Msa0239540:three_prime_UTR
GTTTCTGCGAAAGCTAGCGA+TGG 0.621392 2_2:-14004991 Msa0239540:CDS
GATTAGGAGTTGTTGACATG+TGG 0.625031 2_2:+14002706 None:intergenic
ACAGCCTTTGGAATCTCAGG+TGG 0.625096 2_2:+14002789 None:intergenic
GATGGCTGAATGCAGGATGG+CGG 0.628761 2_2:+14003296 None:intergenic
GTTCACATTAACAACGGATG+AGG 0.630739 2_2:+14005086 None:intergenic
GCAGCAAGGGATCTTATCAG+GGG 0.631769 2_2:-14002924 Msa0239540:CDS
TCCGTTGTTAATGTGAACAC+AGG 0.632113 2_2:-14005081 Msa0239540:CDS
AACAACATCAGAAAACATCC+GGG 0.634932 2_2:-14005317 Msa0239540:CDS
CCTGAAATAATCAAGGGTGA+AGG 0.637156 2_2:-14003101 Msa0239540:CDS
TGGACTAACAGCACATCGAA+GGG 0.637289 2_2:+14003400 None:intergenic
GAGTATGGAGGTCTCCACCC+GGG 0.638079 2_2:+14004494 None:intergenic
CAGGATGGCTGAATGCAGGA+TGG 0.639669 2_2:+14003293 None:intergenic
AGGCTTTAGAGAGAGACACT+GGG 0.639683 2_2:+14006819 None:intergenic
GTTTCTGCCGAAGAGTATGG+AGG 0.641137 2_2:+14004482 None:intergenic
ACATGAGGTAGGAGCAACAC+AGG 0.641339 2_2:+14003274 None:intergenic
ATACAATCCCGAGCATGTGT+AGG 0.645724 2_2:+14003495 None:intergenic
TCACTCGAATTGTCGGAGGA+GGG 0.645953 2_2:-14002430 Msa0239540:three_prime_UTR
GTTTACTTATCTGAGTTGAG+TGG 0.646542 2_2:-14004694 Msa0239540:CDS
GAGGTAGGAGCAACACAGGA+TGG 0.647072 2_2:+14003278 None:intergenic
GGTAAGAGCAGTATTTGCAG+AGG 0.647607 2_2:-14004901 Msa0239540:CDS
GCGACAGCGAAGAAAACTTG+AGG 0.651781 2_2:+14005271 None:intergenic
TGTTGACATGTGGTTAACAA+CGG 0.653551 2_2:+14002716 None:intergenic
CTACTCACTCGAATTGTCGG+AGG 0.666247 2_2:-14002434 Msa0239540:three_prime_UTR
CTGGCACCTGAAATAATCAA+GGG 0.668108 2_2:-14003107 Msa0239540:CDS
TCTCAGGTGGTGTAGCACAT+CGG 0.670407 2_2:+14002802 None:intergenic
GCCTGTGTTCACATTAACAA+CGG 0.677022 2_2:+14005080 None:intergenic
GTGATGGAATTCTGCCCGGG+TGG 0.679002 2_2:-14004508 Msa0239540:CDS
TACACCACCTGAGATTCCAA+AGG 0.680244 2_2:-14002793 Msa0239540:CDS
CCGAGCCACACTGTTTAACG+TGG 0.692194 2_2:-14002991 Msa0239540:CDS
ATCCGGGATTCAAACACCTG+AGG 0.694411 2_2:-14005301 Msa0239540:CDS
ACCTACCACGTTAAACAGTG+TGG 0.697166 2_2:+14002986 None:intergenic
GCCACACTGTTTAACGTGGT+AGG 0.711436 2_2:-14002987 Msa0239540:CDS
AAACGACATAGAGCGAGCGT+CGG 0.711674 2_2:+14003148 None:intergenic
CTCTTCGGCAGAAACAACCA+GGG 0.726242 2_2:-14004474 Msa0239540:CDS
ACAAAGTTGGGAGAAACGGG+TGG 0.730084 2_2:+14004566 None:intergenic
GATTTGCTAGAAAAGAGCCG+GGG 0.742700 2_2:+14003245 None:intergenic
CTGTTGTTAAGGAAAGAGGG+TGG 0.745229 2_2:-14002162 Msa0239540:three_prime_UTR
AGGCTCTGAATCAATCGACG+AGG 0.745997 2_2:+14003364 None:intergenic
GAGATGGGAAGCTATCCAAG+TGG 0.758068 2_2:-14004794 Msa0239540:CDS
GGTGCTTCTGGAAATCGCAG+CGG 0.758291 2_2:+14002960 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTAATTGCATTTA+CGG - chr2_2:14003095-14003114 Msa0239540:CDS 10.0%
!!! TATTTTTTAATTGCATTTAC+GGG - chr2_2:14003096-14003115 Msa0239540:CDS 15.0%
!!! AAAATTGATTTTAACATGTT+TGG + chr2_2:14003221-14003240 None:intergenic 15.0%
!!! ATTTTATTGTAGTATTGAAT+TGG - chr2_2:14004742-14004761 Msa0239540:CDS 15.0%
!!! TTTTATTGTAGTATTGAATT+GGG - chr2_2:14004743-14004762 Msa0239540:CDS 15.0%
!!! AAGATGTTAATTTAATTTGA+TGG - chr2_2:14005427-14005446 Msa0239540:five_prime_UTR 15.0%
!!! AACTATTTTTTAATGTTTCA+AGG - chr2_2:14006435-14006454 Msa0239540:intron 15.0%
!! CAAATAGTAACAATTATGAA+GGG + chr2_2:14002562-14002581 None:intergenic 20.0%
!! TCAAATAGTAACAATTATGA+AGG + chr2_2:14002563-14002582 None:intergenic 20.0%
!! AATTATTATTGTTGTCTTGT+TGG - chr2_2:14002664-14002683 Msa0239540:exon 20.0%
!!! GTTGGTTAATTATGTTTTTA+AGG - chr2_2:14002847-14002866 Msa0239540:CDS 20.0%
!!! TGTAGTTTTTGAAAAAATCA+CGG - chr2_2:14003363-14003382 Msa0239540:CDS 20.0%
!! ATTTATGAAAGTAAGAAGTA+TGG - chr2_2:14003842-14003861 Msa0239540:intron 20.0%
!! TAAGTTGCATCATTTATAAT+GGG + chr2_2:14004721-14004740 None:intergenic 20.0%
!! ATAAGTTGCATCATTTATAA+TGG + chr2_2:14004722-14004741 None:intergenic 20.0%
!!! TATTTTGTTTGATTAAGAGT+AGG - chr2_2:14004891-14004910 Msa0239540:CDS 20.0%
!!! ATTTTGTTTGATTAAGAGTA+GGG - chr2_2:14004892-14004911 Msa0239540:CDS 20.0%
!! ATTCAATTGGATATTTAACT+GGG - chr2_2:14004930-14004949 Msa0239540:CDS 20.0%
!!! TATATTGATTGCAAAAAAGA+TGG - chr2_2:14006390-14006409 Msa0239540:intron 20.0%
!!! AATTGTATGTTTGTTTTTGT+TGG - chr2_2:14006472-14006491 Msa0239540:intron 20.0%
!! TTTAACAAGAAAGAATGAAA+AGG + chr2_2:14006533-14006552 None:intergenic 20.0%
! TTGAAGAATCAGAAAAACTT+GGG + chr2_2:14002269-14002288 None:intergenic 25.0%
! TTTGAAGAATCAGAAAAACT+TGG + chr2_2:14002270-14002289 None:intergenic 25.0%
! TAAAAAATGGATCTTGATGA+AGG + chr2_2:14002439-14002458 None:intergenic 25.0%
! TGATGGAAGTGAATAAAAAA+TGG + chr2_2:14002452-14002471 None:intergenic 25.0%
!! AGTAAAAGTATGAGTCAATT+TGG + chr2_2:14002515-14002534 None:intergenic 25.0%
!!! TTCATAGTTGATTTGCTAAA+TGG - chr2_2:14002757-14002776 Msa0239540:CDS 25.0%
!!! TCATAGTTGATTTGCTAAAT+GGG - chr2_2:14002758-14002777 Msa0239540:CDS 25.0%
!!! TACAAGTTTTGTGTTTTAGT+AGG - chr2_2:14002889-14002908 Msa0239540:CDS 25.0%
!!! AATGTGAGCTAATTTTTTGT+TGG - chr2_2:14002957-14002976 Msa0239540:CDS 25.0%
!!! ACAGTTTTTTTTCGTTTGAT+AGG - chr2_2:14003552-14003571 Msa0239540:intron 25.0%
! AATCAGATTGACCAAATTAA+TGG + chr2_2:14003615-14003634 None:intergenic 25.0%
!! AATTCTTTAGCATTTTCTGA+TGG - chr2_2:14003643-14003662 Msa0239540:intron 25.0%
! ACAAGAGTTATCAAAACTAA+TGG + chr2_2:14004636-14004655 None:intergenic 25.0%
! TTATTTGAAAGCCAAATTGA+AGG + chr2_2:14004682-14004701 None:intergenic 25.0%
!! AGTATTGAATTGGGAAAAAA+AGG - chr2_2:14004752-14004771 Msa0239540:CDS 25.0%
!! AAATCATTGCATCTGAAATT+TGG + chr2_2:14004826-14004845 None:intergenic 25.0%
! GATTCAATTGGATATTTAAC+TGG - chr2_2:14004929-14004948 Msa0239540:CDS 25.0%
! AACTCTTTGAATGTGTATAT+TGG - chr2_2:14004972-14004991 Msa0239540:CDS 25.0%
!! AAGAGTTGTTTCAATTATAG+TGG + chr2_2:14005293-14005312 None:intergenic 25.0%
! ACTATAATTGAAACAACTCT+TGG - chr2_2:14005292-14005311 Msa0239540:CDS 25.0%
! CTATAATTGAAACAACTCTT+GGG - chr2_2:14005293-14005312 Msa0239540:CDS 25.0%
! ATCTGTTTAATCTCATTTAC+TGG - chr2_2:14005317-14005336 Msa0239540:CDS 25.0%
! TCTGTTTAATCTCATTTACT+GGG - chr2_2:14005318-14005337 Msa0239540:CDS 25.0%
! CAATCAAAGAAATCATCATT+AGG + chr2_2:14005400-14005419 None:intergenic 25.0%
! TAACCAGTATTCTTTCTTAA+AGG + chr2_2:14005672-14005691 None:intergenic 25.0%
!! AAAAGATGGTTTTCTTTTAG+AGG - chr2_2:14006404-14006423 Msa0239540:intron 25.0%
TGGAAAGTGAAACGTTAAAA+GGG + chr2_2:14002329-14002348 None:intergenic 30.0%
ATGGAAAGTGAAACGTTAAA+AGG + chr2_2:14002330-14002349 None:intergenic 30.0%
GAGATAAACTTGAAGAGAAA+TGG + chr2_2:14002349-14002368 None:intergenic 30.0%
!!! TTATCTCTTTTTTCTGCATC+TGG - chr2_2:14002362-14002381 Msa0239540:three_prime_UTR 30.0%
!!! TATCTCTTTTTTCTGCATCT+GGG - chr2_2:14002363-14002382 Msa0239540:three_prime_UTR 30.0%
GATGAAGGAAACATGAATTA+GGG + chr2_2:14002424-14002443 None:intergenic 30.0%
TGATGAAGGAAACATGAATT+AGG + chr2_2:14002425-14002444 None:intergenic 30.0%
! AAGTGCAGATTTTTACCATA+AGG + chr2_2:14002488-14002507 None:intergenic 30.0%
TTTGATGCTAAGTGTATGTT+TGG - chr2_2:14002994-14003013 Msa0239540:CDS 30.0%
! TACACCTTCAGAATCAATTT+TGG - chr2_2:14003240-14003259 Msa0239540:CDS 30.0%
TTAGAGCTTGAAGAAATTCA+CGG + chr2_2:14003341-14003360 None:intergenic 30.0%
AAAGAAAGACATAGCATGAT+TGG + chr2_2:14003443-14003462 None:intergenic 30.0%
CATGCTATGTCTTTCTTTAA+TGG - chr2_2:14003445-14003464 Msa0239540:CDS 30.0%
TTATTCATACTGCGTTGAAA+TGG - chr2_2:14003526-14003545 Msa0239540:CDS 30.0%
!!! GTTACTTTTGAAGACACAAA+TGG - chr2_2:14003581-14003600 Msa0239540:intron 30.0%
TGGATGCTAAACCATTAATT+TGG - chr2_2:14003601-14003620 Msa0239540:intron 30.0%
AAACAACATCAGAAAACATC+CGG - chr2_2:14003695-14003714 Msa0239540:intron 30.0%
GATTCACTGAGTAGTAAATT+CGG - chr2_2:14003893-14003912 Msa0239540:intron 30.0%
GACAAAAAGACTTCAGAATA+TGG - chr2_2:14003980-14003999 Msa0239540:intron 30.0%
CAAAATGAGTGTACAAAGTT+GGG + chr2_2:14004462-14004481 None:intergenic 30.0%
TCAAAATGAGTGTACAAAGT+TGG + chr2_2:14004463-14004482 None:intergenic 30.0%
!! TTTGTACACTCATTTTGAGA+CGG - chr2_2:14004465-14004484 Msa0239540:CDS 30.0%
ACTAATGGAAGGAAATCAAA+AGG + chr2_2:14004621-14004640 None:intergenic 30.0%
GAGTTATCAAAACTAATGGA+AGG + chr2_2:14004632-14004651 None:intergenic 30.0%
TTTGCTTGAAACCTTCAATT+TGG - chr2_2:14004668-14004687 Msa0239540:CDS 30.0%
AAAAGGTTGTCATGTATTTG+TGG - chr2_2:14004769-14004788 Msa0239540:CDS 30.0%
GCAATGATTTAAACCATGTA+TGG - chr2_2:14004836-14004855 Msa0239540:CDS 30.0%
! GTATATTGGCAATTTTGCAA+TGG - chr2_2:14004986-14005005 Msa0239540:CDS 30.0%
! TATTCTAAGCCTTTGAGAAT+TGG - chr2_2:14005077-14005096 Msa0239540:CDS 30.0%
! ATTCTAAGCCTTTGAGAATT+GGG - chr2_2:14005078-14005097 Msa0239540:CDS 30.0%
! TACAATATTTGACTTCATGC+AGG + chr2_2:14005160-14005179 None:intergenic 30.0%
! GTTTGATATCTGAAATTGCT+TGG + chr2_2:14005189-14005208 None:intergenic 30.0%
! AATCTTTGAAAGCTTGTTTG+TGG - chr2_2:14005239-14005258 Msa0239540:CDS 30.0%
! ATCTTTGAAAGCTTGTTTGT+GGG - chr2_2:14005240-14005259 Msa0239540:CDS 30.0%
! TTTCTATACGAGTTGTTGTT+TGG - chr2_2:14005972-14005991 Msa0239540:intron 30.0%
! AAAGGGATGTTGTTTAATCT+CGG + chr2_2:14006165-14006184 None:intergenic 30.0%
!!! AAACAACATCCCTTTTTTGA+AGG - chr2_2:14006170-14006189 Msa0239540:intron 30.0%
CATGTTAAAAGAACTGCTAA+TGG - chr2_2:14006554-14006573 Msa0239540:five_prime_UTR 30.0%
TCTCTATGAGTTCAGTAATT+TGG + chr2_2:14006708-14006727 None:intergenic 30.0%
TTCTGATTCTTCAAACTCAG+AGG - chr2_2:14002275-14002294 Msa0239540:three_prime_UTR 35.0%
AAGGAGGAAAATGAAAGTGA+TGG + chr2_2:14002469-14002488 None:intergenic 35.0%
! CACTTTCATTTTCCTCCTTA+TGG - chr2_2:14002470-14002489 Msa0239540:three_prime_UTR 35.0%
! TGCAGATTTTTACCATAAGG+AGG + chr2_2:14002485-14002504 None:intergenic 35.0%
CAGTGAACATAACATAACCT+AGG + chr2_2:14002785-14002804 None:intergenic 35.0%
AATATGTTGTGTTGTGTCTG+AGG - chr2_2:14002818-14002837 Msa0239540:CDS 35.0%
ATATGTTGTGTTGTGTCTGA+GGG - chr2_2:14002819-14002838 Msa0239540:CDS 35.0%
AATTAGCTCACATTCAACAC+AGG + chr2_2:14002951-14002970 None:intergenic 35.0%
!! ATTGATTCTAGCTTGAAGCT+AGG + chr2_2:14003183-14003202 None:intergenic 35.0%
! GCAACCAAAATTGATTCTGA+AGG + chr2_2:14003247-14003266 None:intergenic 35.0%
!!! AATTTTGGTTGCTCCAAATG+TGG - chr2_2:14003255-14003274 Msa0239540:CDS 35.0%
AAACATACTTGGCCTATGTT+TGG + chr2_2:14003283-14003302 None:intergenic 35.0%
AAACATAGGCCAAGTATGTT+TGG - chr2_2:14003282-14003301 Msa0239540:CDS 35.0%
AACATAGGCCAAGTATGTTT+GGG - chr2_2:14003283-14003302 Msa0239540:CDS 35.0%
GCAGTATGAATAAACATGCT+CGG + chr2_2:14003519-14003538 None:intergenic 35.0%
AACAACATCAGAAAACATCC+GGG - chr2_2:14003696-14003715 Msa0239540:intron 35.0%
ACAGAGTTAGACAAATCTTC+AGG + chr2_2:14003791-14003810 None:intergenic 35.0%
AACACGTCAAAGCAGAATAT+CGG - chr2_2:14003815-14003834 Msa0239540:intron 35.0%
ACAAAGCAAATGACATGAGA+TGG - chr2_2:14004203-14004222 Msa0239540:intron 35.0%
CAAAGCAAATGACATGAGAT+GGG - chr2_2:14004204-14004223 Msa0239540:intron 35.0%
TAGAACTAGAGATGGTTCAT+TGG - chr2_2:14004243-14004262 Msa0239540:intron 35.0%
AGAACTAGAGATGGTTCATT+GGG - chr2_2:14004244-14004263 Msa0239540:intron 35.0%
! GTTTACTTATCTGAGTTGAG+TGG - chr2_2:14004319-14004338 Msa0239540:intron 35.0%
TTACTTCGCAATGAAAGTGA+TGG - chr2_2:14004351-14004370 Msa0239540:intron 35.0%
!! CAATGAAAGTGATGGACAAA+GGG - chr2_2:14004359-14004378 Msa0239540:intron 35.0%
GTAACAGTTCATGTGAAATC+TGG - chr2_2:14004799-14004818 Msa0239540:CDS 35.0%
TGTTTGATTAAGAGTAGGGT+AGG - chr2_2:14004896-14004915 Msa0239540:CDS 35.0%
GTTTGATTAAGAGTAGGGTA+GGG - chr2_2:14004897-14004916 Msa0239540:CDS 35.0%
TTTGATTAAGAGTAGGGTAG+GGG - chr2_2:14004898-14004917 Msa0239540:CDS 35.0%
! CACATTCAAAGAGTTTTGCA+GGG + chr2_2:14004967-14004986 None:intergenic 35.0%
! ACACATTCAAAGAGTTTTGC+AGG + chr2_2:14004968-14004987 None:intergenic 35.0%
AGAGTGTAACAAGACTATGA+AGG + chr2_2:14005030-14005049 None:intergenic 35.0%
TGTGTAATCCCAATTCTCAA+AGG + chr2_2:14005089-14005108 None:intergenic 35.0%
!! CATAACTTGCAGATTTTACG+TGG - chr2_2:14005470-14005489 Msa0239540:intron 35.0%
!!! CATTTTCTGGCTTAAGATCA+CGG + chr2_2:14005545-14005564 None:intergenic 35.0%
AGCCAGAAAATGTTCTTGTT+AGG - chr2_2:14005553-14005572 Msa0239540:intron 35.0%
GCCAGAAAATGTTCTTGTTA+GGG - chr2_2:14005554-14005573 Msa0239540:intron 35.0%
! TCCCTAACAAGAACATTTTC+TGG + chr2_2:14005558-14005577 None:intergenic 35.0%
AATGTTCTTGTTAGGGATGA+TGG - chr2_2:14005561-14005580 Msa0239540:intron 35.0%
AATCGACGAGGATTTAACTA+GGG + chr2_2:14005640-14005659 None:intergenic 35.0%
! GAGCCTTTAAGAAAGAATAC+TGG - chr2_2:14005666-14005685 Msa0239540:intron 35.0%
!! TTGATTTGCTAGAAAAGAGC+CGG + chr2_2:14005773-14005792 None:intergenic 35.0%
CAAATCAAAGAAAGAACGCA+AGG - chr2_2:14005785-14005804 Msa0239540:intron 35.0%
TTTGGCAAAACTCCGTTTAA+GGG - chr2_2:14005990-14006009 Msa0239540:intron 35.0%
!! CACAGATTGGCTTATAAAAG+AGG - chr2_2:14006134-14006153 Msa0239540:intron 35.0%
CAATTCACGCCTTCAAAAAA+GGG + chr2_2:14006182-14006201 None:intergenic 35.0%
!!! CTTTTTTGAAGGCGTGAATT+GGG - chr2_2:14006181-14006200 Msa0239540:intron 35.0%
TGTTGACATGTGGTTAACAA+CGG + chr2_2:14006300-14006319 None:intergenic 35.0%
TCAACAACTCCTAATCAGAA+AGG - chr2_2:14006314-14006333 Msa0239540:intron 35.0%
TTGTCAGAACCTTTCTGATT+AGG + chr2_2:14006326-14006345 None:intergenic 35.0%
TCTAGAAGAAATCAAACTCC+AGG + chr2_2:14006352-14006371 None:intergenic 35.0%
!! AGATGGTTTTCTTTTAGAGG+TGG - chr2_2:14006407-14006426 Msa0239540:intron 35.0%
!! GATGGTTTTCTTTTAGAGGT+GGG - chr2_2:14006408-14006427 Msa0239540:intron 35.0%
ACTCCATATCTAAGAGTCTT+AGG - chr2_2:14006627-14006646 Msa0239540:five_prime_UTR 35.0%
GAACCTAAGACTCTTAGATA+TGG + chr2_2:14006633-14006652 None:intergenic 35.0%
TGCAGTTACATCTTACTAGA+AGG + chr2_2:14006663-14006682 None:intergenic 35.0%
!! ACATCAATCCACTTTTGTCT+GGG + chr2_2:14006795-14006814 None:intergenic 35.0%
!! TACATCAATCCACTTTTGTC+TGG + chr2_2:14006796-14006815 None:intergenic 35.0%
! TCTTCTCTCTTGGTAGCTTT+AGG + chr2_2:14002217-14002236 None:intergenic 40.0%
!!! CAAACTCAGAGGTACTCTTT+TGG - chr2_2:14002286-14002305 Msa0239540:three_prime_UTR 40.0%
!! TGATTTGCTAAATGGGTCCT+AGG - chr2_2:14002765-14002784 Msa0239540:CDS 40.0%
TATGGTGTTCCGTCTCAAAA+GGG - chr2_2:14003860-14003879 Msa0239540:intron 40.0%
CTGAGTAGTAAATTCGGTTC+TGG - chr2_2:14003899-14003918 Msa0239540:intron 40.0%
GTTCACATTAACAACGGATG+AGG + chr2_2:14003930-14003949 None:intergenic 40.0%
TCCGTTGTTAATGTGAACAC+AGG - chr2_2:14003932-14003951 Msa0239540:intron 40.0%
GCCTGTGTTCACATTAACAA+CGG + chr2_2:14003936-14003955 None:intergenic 40.0%
CACTCTCAACAAAATCAGCT+CGG + chr2_2:14004093-14004112 None:intergenic 40.0%
! CTCATGTCATTTGCTTTGTG+AGG + chr2_2:14004202-14004221 None:intergenic 40.0%
!! CATCTCTAGTTCTAACCACT+TGG + chr2_2:14004237-14004256 None:intergenic 40.0%
CAAGTGGTTAGAACTAGAGA+TGG - chr2_2:14004235-14004254 Msa0239540:intron 40.0%
AGAGATGGTTCATTGGGTTT+AGG - chr2_2:14004250-14004269 Msa0239540:intron 40.0%
! TTCAGACTTCTGAAGAGACT+GGG - chr2_2:14004277-14004296 Msa0239540:intron 40.0%
!! GCAATGAAAGTGATGGACAA+AGG - chr2_2:14004358-14004377 Msa0239540:intron 40.0%
TGTACAAAGTTGGGAGAAAC+GGG + chr2_2:14004453-14004472 None:intergenic 40.0%
GTGTACAAAGTTGGGAGAAA+CGG + chr2_2:14004454-14004473 None:intergenic 40.0%
!! GAAATTTTCGTGCTTGGTGA+TGG - chr2_2:14004489-14004508 Msa0239540:CDS 40.0%
AACCATGTATGGTTCGAATG+AGG - chr2_2:14004847-14004866 Msa0239540:CDS 40.0%
! GAGTTTTGCAGGGAAAGTTT+TGG + chr2_2:14004957-14004976 None:intergenic 40.0%
! GACTATGAAGGTACAGAAAC+AGG + chr2_2:14005018-14005037 None:intergenic 40.0%
CTTCATGCAGGACTCAAAAA+AGG + chr2_2:14005148-14005167 None:intergenic 40.0%
! GATATCTGAAATTGCTTGGC+AGG + chr2_2:14005185-14005204 None:intergenic 40.0%
CAATCGACGAGGATTTAACT+AGG + chr2_2:14005641-14005660 None:intergenic 40.0%
!! TGATTTGCTAGAAAAGAGCC+GGG + chr2_2:14005772-14005791 None:intergenic 40.0%
! TTGATTGCCAAGTTCGGTTT+TGG + chr2_2:14005811-14005830 None:intergenic 40.0%
!! ACTGACTTGATTGCCAAGTT+CGG + chr2_2:14005817-14005836 None:intergenic 40.0%
TGTTGGAACTCATGAATACC+TGG - chr2_2:14005887-14005906 Msa0239540:intron 40.0%
CTGGCACCTGAAATAATCAA+GGG - chr2_2:14005906-14005925 Msa0239540:intron 40.0%
CCTTCACCCTTGATTATTTC+AGG + chr2_2:14005915-14005934 None:intergenic 40.0%
CCTGAAATAATCAAGGGTGA+AGG - chr2_2:14005912-14005931 Msa0239540:intron 40.0%
ATAATCAAGGGTGAAGGTCA+CGG - chr2_2:14005918-14005937 Msa0239540:intron 40.0%
GTTTGGCAAAACTCCGTTTA+AGG - chr2_2:14005989-14006008 Msa0239540:intron 40.0%
AAAACTCCGTTTAAGGGATC+CGG - chr2_2:14005996-14006015 Msa0239540:intron 40.0%
!! TGTTGTTAGCTTTGCAGCAA+GGG - chr2_2:14006076-14006095 Msa0239540:intron 40.0%
! TATCAGGGGTTTGCTTGTAA+AGG - chr2_2:14006103-14006122 Msa0239540:intron 40.0%
TTATAAGCCAATCTGTGCTG+AGG + chr2_2:14006131-14006150 None:intergenic 40.0%
CCAATTCACGCCTTCAAAAA+AGG + chr2_2:14006183-14006202 None:intergenic 40.0%
!!! CCTTTTTTGAAGGCGTGAAT+TGG - chr2_2:14006180-14006199 Msa0239540:intron 40.0%
TTCTCAAACTCAACAGCCTT+TGG + chr2_2:14006239-14006258 None:intergenic 40.0%
GATTAGGAGTTGTTGACATG+TGG + chr2_2:14006310-14006329 None:intergenic 40.0%
! GAAAGGTTCTGACAATTACC+TGG - chr2_2:14006331-14006350 Msa0239540:intron 40.0%
!! GTTTTCTTTTAGAGGTGGGA+GGG - chr2_2:14006412-14006431 Msa0239540:intron 40.0%
GTTTCAAGGAACAGATGATG+AGG - chr2_2:14006449-14006468 Msa0239540:intron 40.0%
GAGGAGGGAAATTGCATATT+TGG - chr2_2:14006598-14006617 Msa0239540:five_prime_UTR 40.0%
! GAGAAGTAGCGTTGAAGTAA+TGG - chr2_2:14006729-14006748 Msa0239540:five_prime_UTR 40.0%
!! TCGAGATTAGCCTGTTGTTA+AGG - chr2_2:14006840-14006859 Msa0239540:five_prime_UTR 40.0%
TAGCCTGTTGTTAAGGAAAG+AGG - chr2_2:14006847-14006866 Msa0239540:five_prime_UTR 40.0%
AGCCTGTTGTTAAGGAAAGA+GGG - chr2_2:14006848-14006867 Msa0239540:five_prime_UTR 40.0%
!! AGGCTTTAGAGAGAGACACT+GGG + chr2_2:14002197-14002216 None:intergenic 45.0%
!! TAGGCTTTAGAGAGAGACAC+TGG + chr2_2:14002198-14002217 None:intergenic 45.0%
AGAGAGAGGTTCTTCTCTCT+TGG + chr2_2:14002227-14002246 None:intergenic 45.0%
!!! ACTCAGAGGTACTCTTTTGG+TGG - chr2_2:14002289-14002308 Msa0239540:three_prime_UTR 45.0%
!!! CTCAGAGGTACTCTTTTGGT+GGG - chr2_2:14002290-14002309 Msa0239540:three_prime_UTR 45.0%
TGGGTCTCTCTCTTTCTCTT+TGG - chr2_2:14002382-14002401 Msa0239540:three_prime_UTR 45.0%
TGTGTTGTGTCTGAGGGTTT+AGG - chr2_2:14002825-14002844 Msa0239540:CDS 45.0%
TTGTGTCTGAGGGTTTAGGT+TGG - chr2_2:14002829-14002848 Msa0239540:CDS 45.0%
CCTATGTTTGGCACCACATT+TGG + chr2_2:14003271-14003290 None:intergenic 45.0%
! CCAAATGTGGTGCCAAACAT+AGG - chr2_2:14003268-14003287 Msa0239540:CDS 45.0%
ATAGGCCAAGTATGTTTGGG+TGG - chr2_2:14003286-14003305 Msa0239540:CDS 45.0%
TAGGCCAAGTATGTTTGGGT+GGG - chr2_2:14003287-14003306 Msa0239540:CDS 45.0%
! TGAAGAAATTCACGGTGCTG+CGG + chr2_2:14003333-14003352 None:intergenic 45.0%
GTATGGTGTTCCGTCTCAAA+AGG - chr2_2:14003859-14003878 Msa0239540:intron 45.0%
!! GCAGAAGAACCCTTTTGAGA+CGG + chr2_2:14003872-14003891 None:intergenic 45.0%
CACATTAACAACGGATGAGG+AGG + chr2_2:14003927-14003946 None:intergenic 45.0%
ACTTGTCTTCGCAATACTGC+TGG + chr2_2:14004050-14004069 None:intergenic 45.0%
AGCAGTATTGCGAAGACAAG+TGG - chr2_2:14004049-14004068 Msa0239540:intron 45.0%
!! CGAGCTGATTTTGTTGAGAG+TGG - chr2_2:14004091-14004110 Msa0239540:intron 45.0%
GGTAAGAGCAGTATTTGCAG+AGG - chr2_2:14004112-14004131 Msa0239540:intron 45.0%
GTCTCTTCAGAAGTCTGAAG+TGG + chr2_2:14004276-14004295 None:intergenic 45.0%
! CTTCAGACTTCTGAAGAGAC+TGG - chr2_2:14004276-14004295 Msa0239540:intron 45.0%
AGACTGGGTTGTGGAGATAT+TGG - chr2_2:14004292-14004311 Msa0239540:intron 45.0%
GAAGTTACTTCGTGCTCAGA+CGG - chr2_2:14004399-14004418 Msa0239540:intron 45.0%
! GACGGAGAAATTTTCGTGCT+TGG - chr2_2:14004483-14004502 Msa0239540:CDS 45.0%
!! GTTGTTTCTGCCGAAGAGTA+TGG + chr2_2:14004537-14004556 None:intergenic 45.0%
CTCCTCATTCGAACCATACA+TGG + chr2_2:14004852-14004871 None:intergenic 45.0%
TGTATGGTTCGAATGAGGAG+AGG - chr2_2:14004852-14004871 Msa0239540:CDS 45.0%
GTATGGTTCGAATGAGGAGA+GGG - chr2_2:14004853-14004872 Msa0239540:CDS 45.0%
! TTGCAGATTTTACGTGGCAG+AGG - chr2_2:14005476-14005495 Msa0239540:intron 45.0%
! ATGGAGTACCTACACATGCT+CGG - chr2_2:14005510-14005529 Msa0239540:intron 45.0%
ATACAATCCCGAGCATGTGT+AGG + chr2_2:14005521-14005540 None:intergenic 45.0%
TCGAAGGGAAAGGTCAAAGT+CGG + chr2_2:14005601-14005620 None:intergenic 45.0%
TAACAGCACATCGAAGGGAA+AGG + chr2_2:14005611-14005630 None:intergenic 45.0%
TGGACTAACAGCACATCGAA+GGG + chr2_2:14005616-14005635 None:intergenic 45.0%
TTGGACTAACAGCACATCGA+AGG + chr2_2:14005617-14005636 None:intergenic 45.0%
GACGAGGATTTAACTAGGGT+TGG + chr2_2:14005636-14005655 None:intergenic 45.0%
! CTACCTCATGTTTTTCACCC+CGG - chr2_2:14005751-14005770 Msa0239540:intron 45.0%
!! GATTTGCTAGAAAAGAGCCG+GGG + chr2_2:14005771-14005790 None:intergenic 45.0%
! CCTTGATTATTTCAGGTGCC+AGG + chr2_2:14005908-14005927 None:intergenic 45.0%
CCTGGCACCTGAAATAATCA+AGG - chr2_2:14005905-14005924 Msa0239540:intron 45.0%
!! GCAGTTGATTGGTGGACTTA+TGG - chr2_2:14005945-14005964 Msa0239540:intron 45.0%
AAACTCCGTTTAAGGGATCC+GGG - chr2_2:14005997-14006016 Msa0239540:intron 45.0%
ACCTACCACGTTAAACAGTG+TGG + chr2_2:14006030-14006049 None:intergenic 45.0%
AAGCTAACAACAGGTGCTTC+TGG + chr2_2:14006068-14006087 None:intergenic 45.0%
CTTGCTGCAAAGCTAACAAC+AGG + chr2_2:14006077-14006096 None:intergenic 45.0%
!! CTGTTGTTAGCTTTGCAGCA+AGG - chr2_2:14006075-14006094 Msa0239540:intron 45.0%
TTGCAGCAAGGGATCTTATC+AGG - chr2_2:14006087-14006106 Msa0239540:intron 45.0%
TGCAGCAAGGGATCTTATCA+GGG - chr2_2:14006088-14006107 Msa0239540:intron 45.0%
AAAGGAACCTCAGCACAGAT+TGG - chr2_2:14006121-14006140 Msa0239540:intron 45.0%
TACACCACCTGAGATTCCAA+AGG - chr2_2:14006220-14006239 Msa0239540:intron 45.0%
!! TCAACAGCCTTTGGAATCTC+AGG + chr2_2:14006230-14006249 None:intergenic 45.0%
!! GGTTTTCTTTTAGAGGTGGG+AGG - chr2_2:14006411-14006430 Msa0239540:intron 45.0%
! GTGCTACTCACTCGAATTGT+CGG - chr2_2:14006576-14006595 Msa0239540:five_prime_UTR 45.0%
AGTGAAGTCCCAGACAAAAG+TGG - chr2_2:14006784-14006803 Msa0239540:five_prime_UTR 45.0%
CACCCTCTTTCCTTAACAAC+AGG + chr2_2:14006853-14006872 None:intergenic 45.0%
CTGTTGTTAAGGAAAGAGGG+TGG - chr2_2:14006851-14006870 Msa0239540:five_prime_UTR 45.0%
!! GTTGGCTGTGGTGGACTATT+AGG + chr2_2:14002171-14002190 None:intergenic 50.0%
AATAGTCCACCACAGCCAAC+AGG - chr2_2:14002171-14002190 Msa0239540:three_prime_UTR 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr2_2:14002143-14002162 None:intergenic 50.0%
ATCGCCCACCCAAACATACT+TGG + chr2_2:14003294-14003313 None:intergenic 50.0%
ATCCGGGATTCAAACACCTG+AGG - chr2_2:14003712-14003731 Msa0239540:intron 50.0%
AACTTGAGGTCTTTCGCCTC+AGG + chr2_2:14003731-14003750 None:intergenic 50.0%
GCGACAGCGAAGAAAACTTG+AGG + chr2_2:14003745-14003764 None:intergenic 50.0%
! TCGCTGTCGCTTCAAAAGAC+AGG - chr2_2:14003755-14003774 Msa0239540:intron 50.0%
! CGCTGTCGCTTCAAAAGACA+GGG - chr2_2:14003756-14003775 Msa0239540:intron 50.0%
GTTTCTGCGAAAGCTAGCGA+TGG - chr2_2:14004022-14004041 Msa0239540:intron 50.0%
GAGATGGGAAGCTATCCAAG+TGG - chr2_2:14004219-14004238 Msa0239540:intron 50.0%
! CTTCTGAAGAGACTGGGTTG+TGG - chr2_2:14004283-14004302 Msa0239540:intron 50.0%
TACTTCGTGCTCAGACGGAA+CGG - chr2_2:14004404-14004423 Msa0239540:intron 50.0%
ACAAAGTTGGGAGAAACGGG+TGG + chr2_2:14004450-14004469 None:intergenic 50.0%
!! CTTGGTGATGGAATTCTGCC+CGG - chr2_2:14004501-14004520 Msa0239540:CDS 50.0%
!! TTGGTGATGGAATTCTGCCC+GGG - chr2_2:14004502-14004521 Msa0239540:CDS 50.0%
GTGGAGACCTCCATACTCTT+CGG - chr2_2:14004524-14004543 Msa0239540:CDS 50.0%
! GTTTCTGCCGAAGAGTATGG+AGG + chr2_2:14004534-14004553 None:intergenic 50.0%
ACTCTTCGGCAGAAACAACC+AGG - chr2_2:14004538-14004557 Msa0239540:CDS 50.0%
CTCTTCGGCAGAAACAACCA+GGG - chr2_2:14004539-14004558 Msa0239540:CDS 50.0%
TGCTCAGGAAAATGCTTCCC+TGG + chr2_2:14004559-14004578 None:intergenic 50.0%
!!! AGGGAAGCATTTTCCTGAGC+AGG - chr2_2:14004558-14004577 Msa0239540:CDS 50.0%
ACATACTTCACTGCCTGCTC+AGG + chr2_2:14004574-14004593 None:intergenic 50.0%
TTAAGAGTAGGGTAGGGGAG+AGG - chr2_2:14004903-14004922 Msa0239540:CDS 50.0%
TTACGTGGCAGAGGTTCTAC+TGG - chr2_2:14005485-14005504 Msa0239540:intron 50.0%
! TGGAGTACCTACACATGCTC+GGG - chr2_2:14005511-14005530 Msa0239540:intron 50.0%
!! AGGCTCTGAATCAATCGACG+AGG + chr2_2:14005652-14005671 None:intergenic 50.0%
AACACAGGATGGCTGAATGC+AGG + chr2_2:14005727-14005746 None:intergenic 50.0%
ACATGAGGTAGGAGCAACAC+AGG + chr2_2:14005742-14005761 None:intergenic 50.0%
CGGGGTGAAAAACATGAGGT+AGG + chr2_2:14005753-14005772 None:intergenic 50.0%
TCTGCAATGAGCTCAGGTAG+AGG + chr2_2:14005840-14005859 None:intergenic 50.0%
AAACGACATAGAGCGAGCGT+CGG + chr2_2:14005868-14005887 None:intergenic 50.0%
! GCTCGCTCTATGTCGTTTGT+TGG - chr2_2:14005870-14005889 Msa0239540:intron 50.0%
CCACGTTAAACAGTGTGGCT+CGG + chr2_2:14006025-14006044 None:intergenic 50.0%
GCCACACTGTTTAACGTGGT+AGG - chr2_2:14006026-14006045 Msa0239540:intron 50.0%
GCAGCAAGGGATCTTATCAG+GGG - chr2_2:14006089-14006108 Msa0239540:intron 50.0%
TGGTGTAGCACATCGGATCA+AGG + chr2_2:14006207-14006226 None:intergenic 50.0%
TCTCAGGTGGTGTAGCACAT+CGG + chr2_2:14006214-14006233 None:intergenic 50.0%
!! ACAGCCTTTGGAATCTCAGG+TGG + chr2_2:14006227-14006246 None:intergenic 50.0%
CTACTCACTCGAATTGTCGG+AGG - chr2_2:14006579-14006598 Msa0239540:five_prime_UTR 50.0%
TCACTCGAATTGTCGGAGGA+GGG - chr2_2:14006583-14006602 Msa0239540:five_prime_UTR 50.0%
GGAAAGAGGGTGGAAAAGTG+TGG - chr2_2:14006861-14006880 Msa0239540:five_prime_UTR 50.0%
GTTTGGGTGGGCGATGAGTT+TGG - chr2_2:14003299-14003318 Msa0239540:CDS 55.0%
CGCCTCAGGTGTTTGAATCC+CGG + chr2_2:14003717-14003736 None:intergenic 55.0%
ACTTCGTGCTCAGACGGAAC+GGG - chr2_2:14004405-14004424 Msa0239540:intron 55.0%
AGAGTATGGAGGTCTCCACC+CGG + chr2_2:14004523-14004542 None:intergenic 55.0%
GGGGAGAGGAGGGATTCAAT+TGG - chr2_2:14004917-14004936 Msa0239540:CDS 55.0%
GGCAGAGGTTCTACTGGCAA+TGG - chr2_2:14005491-14005510 Msa0239540:intron 55.0%
! GATGGCGGCTCAATACATGC+AGG + chr2_2:14005705-14005724 None:intergenic 55.0%
GATGGCTGAATGCAGGATGG+CGG + chr2_2:14005720-14005739 None:intergenic 55.0%
CAGGATGGCTGAATGCAGGA+TGG + chr2_2:14005723-14005742 None:intergenic 55.0%
GAGGTAGGAGCAACACAGGA+TGG + chr2_2:14005738-14005757 None:intergenic 55.0%
GAGCCGGGGTGAAAAACATG+AGG + chr2_2:14005757-14005776 None:intergenic 55.0%
CGCAAGGCCAAAACCGAACT+TGG - chr2_2:14005801-14005820 Msa0239540:intron 55.0%
GTCACGGCAGTGCAGTTGAT+TGG - chr2_2:14005934-14005953 Msa0239540:intron 55.0%
ACGGCAGTGCAGTTGATTGG+TGG - chr2_2:14005937-14005956 Msa0239540:intron 55.0%
CGGTTCCCGGATCCCTTAAA+CGG + chr2_2:14006005-14006024 None:intergenic 55.0%
!! AAACAGTGTGGCTCGGTTCC+CGG + chr2_2:14006018-14006037 None:intergenic 55.0%
CCGAGCCACACTGTTTAACG+TGG - chr2_2:14006022-14006041 Msa0239540:intron 55.0%
! GGTGCTTCTGGAAATCGCAG+CGG + chr2_2:14006056-14006075 None:intergenic 55.0%
TGCATCGTCTGCTGGCGATA+AGG - chr2_2:14006274-14006293 Msa0239540:intron 55.0%
CTCACTCGAATTGTCGGAGG+AGG - chr2_2:14006582-14006601 Msa0239540:five_prime_UTR 55.0%
! AGGGTGGAAAAGTGTGGCGA+GGG - chr2_2:14006867-14006886 Msa0239540:five_prime_UTR 55.0%
GAGAGAGACACTGGGCCTGT+TGG + chr2_2:14002189-14002208 None:intergenic 60.0%
! GTGATGGAATTCTGCCCGGG+TGG - chr2_2:14004505-14004524 Msa0239540:CDS 60.0%
GAGTATGGAGGTCTCCACCC+GGG + chr2_2:14004522-14004541 None:intergenic 60.0%
AGAGTAGGGTAGGGGAGAGG+AGG - chr2_2:14004906-14004925 Msa0239540:CDS 60.0%
GAGTAGGGTAGGGGAGAGGA+GGG - chr2_2:14004907-14004926 Msa0239540:CDS 60.0%
GTGGGCTCTGCAATGAGCTC+AGG + chr2_2:14005846-14005865 None:intergenic 60.0%
!! GACATAGAGCGAGCGTCGGT+GGG + chr2_2:14005864-14005883 None:intergenic 60.0%
! GAGGGTGGAAAAGTGTGGCG+AGG - chr2_2:14006866-14006885 Msa0239540:five_prime_UTR 60.0%
! GGGTGGAAAAGTGTGGCGAG+GGG - chr2_2:14006868-14006887 Msa0239540:five_prime_UTR 60.0%
! GGTGGAAAAGTGTGGCGAGG+GGG - chr2_2:14006869-14006888 Msa0239540:five_prime_UTR 60.0%
! ACTGGGCCTGTTGGCTGTGG+TGG + chr2_2:14002180-14002199 None:intergenic 65.0%
! GACACTGGGCCTGTTGGCTG+TGG + chr2_2:14002183-14002202 None:intergenic 65.0%
!! CGACATAGAGCGAGCGTCGG+TGG + chr2_2:14005865-14005884 None:intergenic 65.0%
GCAGACGATGCAGCTGGGGA+AGG + chr2_2:14006266-14006285 None:intergenic 65.0%
TCCCCAGCTGCATCGTCTGC+TGG - chr2_2:14006266-14006285 Msa0239540:intron 65.0%
GCCAGCAGACGATGCAGCTG+GGG + chr2_2:14006270-14006289 None:intergenic 65.0%
CGCCAGCAGACGATGCAGCT+GGG + chr2_2:14006271-14006290 None:intergenic 65.0%
TCGCCAGCAGACGATGCAGC+TGG + chr2_2:14006272-14006291 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 14002143 14006892 14002143 ID=Msa0239540;Name=Msa0239540
chr2_2 mRNA 14002143 14006892 14002143 ID=Msa0239540-mRNA-1;Parent=Msa0239540;Name=Msa0239540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=437|1|1|1|0.5|0.33|3|522|604
chr2_2 exon 14002143 14003553 14002143 ID=Msa0239540-mRNA-1:exon:5847;Parent=Msa0239540-mRNA-1
chr2_2 exon 14004448 14005461 14004448 ID=Msa0239540-mRNA-1:exon:5846;Parent=Msa0239540-mRNA-1
chr2_2 exon 14006544 14006892 14006544 ID=Msa0239540-mRNA-1:exon:5845;Parent=Msa0239540-mRNA-1
chr2_2 five_prime_UTR 14006544 14006892 14006544 ID=Msa0239540-mRNA-1:five_prime_utr;Parent=Msa0239540-mRNA-1
chr2_2 five_prime_UTR 14005374 14005461 14005374 ID=Msa0239540-mRNA-1:five_prime_utr;Parent=Msa0239540-mRNA-1
chr2_2 CDS 14004448 14005373 14004448 ID=Msa0239540-mRNA-1:cds;Parent=Msa0239540-mRNA-1
chr2_2 CDS 14002665 14003553 14002665 ID=Msa0239540-mRNA-1:cds;Parent=Msa0239540-mRNA-1
chr2_2 three_prime_UTR 14002143 14002664 14002143 ID=Msa0239540-mRNA-1:three_prime_utr;Parent=Msa0239540-mRNA-1
Gene Sequence

>Msa0239540

ATGGACTCGAAAACTAGTGCTAGATCTCTATCTAAACAACATCAGAAAACATCCGGGATTCAAACACCTGAGGCGAAAGACCTCAAGTTTTCTTCGCTGTCGCTTCAAAAGACAGGGAAATCTGAGCCTGAAGATTTGTCTAACTCTGTACAAAACACGTCAAAGCAGAATATCGGCGAAATTTATGAAAGTAAGAAGTATGGTGTTCCGTCTCAAAAGGGTTCTTCTGCTGATTCACTGAGTAGTAAATTCGGTTCTGGTGCCTCCTCATCCGTTGTTAATGTGAACACAGGCTCACAAGAAAGCTCTATCGATCAAGACAAAAAGACTTCAGAATATGGAAGTGTGAAAAACAGTTCTGTTTCTGCGAAAGCTAGCGATGGTGCCAGCAGTATTGCGAAGACAAGTGGAAGTGCTAAGATCAGTGACCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGCGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCGTAAACAAGCCTCACAAAGCAAATGACATGAGATGGGAAGCTATCCAAGTGGTTAGAACTAGAGATGGTTCATTGGGTTTAGGCCACTTCAGACTTCTGAAGAGACTGGGTTGTGGAGATATTGGCAGCGTTTACTTATCTGAGTTGAGTGGAACTAAATGTTACTTCGCAATGAAAGTGATGGACAAAGGGTCTTTAGCAAGTCGTAAGAAGTTACTTCGTGCTCAGACGGAACGGGAAATTCTTCAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAGACGGAGAAATTTTCGTGCTTGGTGATGGAATTCTGCCCGGGTGGAGACCTCCATACTCTTCGGCAGAAACAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAATTTTACGTGGCAGAGGTTCTACTGGCAATGGAGTACCTACACATGCTCGGGATTGTATACCGTGATCTTAAGCCAGAAAATGTTCTTGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTTCGATGTGCTGTTAGTCCAACCCTAGTTAAATCCTCGTCGATTGATTCAGAGCCTTTAAGAAAGAATACTGGTTACTGTGCTCAGCCTGCATGTATTGAGCCGCCATCCTGCATTCAGCCATCCTGTGTTGCTCCTACCTCATGTTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAAGAACGCAAGGCCAAAACCGAACTTGGCAATCAAGTCAGTCCTCTACCTGAGCTCATTGCAGAGCCCACCGACGCTCGCTCTATGTCGTTTGTTGGAACTCATGAATACCTGGCACCTGAAATAATCAAGGGTGAAGGTCACGGCAGTGCAGTTGATTGGTGGACTTATGGAATCTTTCTATACGAGTTGTTGTTTGGCAAAACTCCGTTTAAGGGATCCGGGAACCGAGCCACACTGTTTAACGTGGTAGGTCAGCCGCTGCGATTTCCAGAAGCACCTGTTGTTAGCTTTGCAGCAAGGGATCTTATCAGGGGTTTGCTTGTAAAGGAACCTCAGCACAGATTGGCTTATAAAAGAGGCGCAACCGAGATTAAACAACATCCCTTTTTTGAAGGCGTGAATTGGGCCTTGATCCGATGTGCTACACCACCTGAGATTCCAAAGGCTGTTGAGTTTGAGAAGATACCTTCCCCAGCTGCATCGTCTGCTGGCGATAAGGCCGTTGTTAACCACATGTCAACAACTCCTAATCAGAAAGGTTCTGACAATTACCTGGAGTTTGATTTCTTCTAG
Protein sequence

>Msa0239540

MDSKTSARSLSKQHQKTSGIQTPEAKDLKFSSLSLQKTGKSEPEDLSNSVQNTSKQNIGEIYESKKYGVPSQKGSSADSLSSKFGSGASSSVVNVNTGSQESSIDQDKKTSEYGSVKNSSVSAKASDGASSIAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDMRWEAIQVVRTRDGSLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSIDSEPLRKNTGYCAQPACIEPPSCIQPSCVAPTSCFSPRLFSSKSKKERKAKTELGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPAASSAGDKAVVNHMSTTPNQKGSDNYLEFDFF*