Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198010 | XP_003594402.2 | 97.581 | 496 | 9 | 2 | 1 | 494 | 1 | 495 | 0.0 | 983 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198010 | sp|O80588|EDE1_ARATH | 48.000 | 225 | 116 | 1 | 260 | 484 | 243 | 466 | 1.69e-65 | 222 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198010 | G7ISS1 | 97.581 | 496 | 9 | 2 | 1 | 494 | 1 | 495 | 0.0 | 983 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0198010 | Msa0317650 | 0.966277 | 1.046353e-125 | -8.615850e-47 |
| Msa0198010 | Msa0989370 | 0.805965 | 1.034507e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198010 | MtrunA17_Chr2g0291221 | 97.581 | 496 | 9 | 2 | 1 | 494 | 1 | 495 | 0.0 | 983 |
| Msa0198010 | MtrunA17_Chr1g0207481 | 40.488 | 205 | 122 | 0 | 275 | 479 | 406 | 610 | 1.31e-45 | 168 |
| Msa0198010 | MtrunA17_Chr4g0073681 | 39.130 | 207 | 126 | 0 | 273 | 479 | 403 | 609 | 3.13e-42 | 159 |
| Msa0198010 | MtrunA17_Chr1g0152681 | 36.364 | 209 | 133 | 0 | 274 | 482 | 408 | 616 | 2.05e-36 | 142 |
| Msa0198010 | MtrunA17_Chr3g0079101 | 30.435 | 207 | 143 | 1 | 273 | 478 | 161 | 367 | 4.71e-23 | 100 |
| Msa0198010 | MtrunA17_Chr2g0323821 | 28.283 | 198 | 142 | 0 | 282 | 479 | 286 | 483 | 8.01e-21 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198010 | AT2G44190.1 | 48.000 | 225 | 116 | 1 | 260 | 484 | 243 | 466 | 1.71e-66 | 222 |
| Msa0198010 | AT3G19570.2 | 39.806 | 206 | 124 | 0 | 274 | 479 | 436 | 641 | 9.24e-48 | 175 |
| Msa0198010 | AT3G19570.1 | 39.894 | 188 | 113 | 0 | 274 | 461 | 436 | 623 | 4.47e-42 | 159 |
| Msa0198010 | AT4G30710.3 | 40.291 | 206 | 122 | 1 | 273 | 478 | 416 | 620 | 4.69e-42 | 159 |
| Msa0198010 | AT4G30710.1 | 40.291 | 206 | 122 | 1 | 273 | 478 | 416 | 620 | 4.69e-42 | 159 |
| Msa0198010 | AT4G30710.2 | 39.320 | 206 | 124 | 1 | 273 | 478 | 416 | 620 | 1.87e-40 | 154 |
| Msa0198010 | AT1G49890.1 | 38.462 | 208 | 128 | 0 | 275 | 482 | 442 | 649 | 1.35e-37 | 146 |
| Msa0198010 | AT4G30710.4 | 38.579 | 197 | 120 | 1 | 273 | 469 | 416 | 611 | 2.54e-36 | 142 |
| Msa0198010 | AT2G24070.1 | 33.200 | 250 | 160 | 2 | 229 | 478 | 342 | 584 | 3.50e-35 | 139 |
| Msa0198010 | AT2G24070.3 | 33.200 | 250 | 160 | 2 | 229 | 478 | 342 | 584 | 3.50e-35 | 139 |
| Msa0198010 | AT2G24070.2 | 33.200 | 250 | 160 | 2 | 229 | 478 | 342 | 584 | 3.50e-35 | 139 |
| Msa0198010 | AT3G19570.4 | 41.401 | 157 | 92 | 0 | 274 | 430 | 436 | 592 | 3.83e-33 | 133 |
| Msa0198010 | AT3G19570.3 | 41.401 | 157 | 92 | 0 | 274 | 430 | 436 | 592 | 3.83e-33 | 133 |
| Msa0198010 | AT5G43160.1 | 34.361 | 227 | 144 | 3 | 255 | 480 | 39 | 261 | 1.26e-27 | 111 |
| Msa0198010 | AT5G43160.2 | 34.361 | 227 | 144 | 3 | 255 | 480 | 39 | 261 | 1.26e-27 | 111 |
| Msa0198010 | AT4G25190.1 | 30.928 | 194 | 134 | 0 | 285 | 478 | 195 | 388 | 8.39e-23 | 100 |
| Msa0198010 | AT4G25190.2 | 30.457 | 197 | 132 | 2 | 285 | 478 | 195 | 389 | 3.23e-21 | 95.9 |
| Msa0198010 | AT2G20815.4 | 27.500 | 240 | 164 | 3 | 241 | 480 | 165 | 394 | 3.10e-16 | 81.3 |
| Msa0198010 | AT2G20815.1 | 27.320 | 194 | 141 | 0 | 287 | 480 | 278 | 471 | 1.15e-15 | 79.7 |
| Msa0198010 | AT2G20815.3 | 27.179 | 195 | 141 | 1 | 287 | 480 | 278 | 472 | 8.79e-15 | 77.0 |
| Msa0198010 | AT2G20815.2 | 27.179 | 195 | 141 | 1 | 287 | 480 | 249 | 443 | 1.08e-14 | 76.6 |
Find 141 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGTTAGTTTGAGTTCTTC+TGG | 0.177672 | 2_1:-16510644 | Msa0198010:CDS |
| TCAAAGAATCTACAAATAAT+AGG | 0.182462 | 2_1:-16511105 | Msa0198010:CDS |
| TAACCTTTGGCATTAATCTT+TGG | 0.191269 | 2_1:+16508512 | None:intergenic |
| TTATCCATTTATTGAGAAAA+AGG | 0.198470 | 2_1:-16507763 | Msa0198010:three_prime_UTR |
| TTCTTCAGCTGCTACGAAAT+TGG | 0.223111 | 2_1:-16510879 | Msa0198010:CDS |
| GAGCTGACTTCACGGGTTCT+TGG | 0.234344 | 2_1:+16511268 | None:intergenic |
| ATGAAATGTTTGCTTCAAAT+AGG | 0.237835 | 2_1:-16507553 | Msa0198010:three_prime_UTR |
| TGAGAATGAGAATGAGAATT+AGG | 0.239309 | 2_1:+16511061 | None:intergenic |
| AACCTTTGGCATTAATCTTT+GGG | 0.288094 | 2_1:+16508513 | None:intergenic |
| GGTGGCGGCGGAGGCGGTGG+AGG | 0.293972 | 2_1:+16511307 | None:intergenic |
| TTCTATCAATGAAGCAATTC+AGG | 0.294092 | 2_1:-16508753 | Msa0198010:CDS |
| TTCCAACTGGTGGGAATGTT+AGG | 0.294542 | 2_1:-16508706 | Msa0198010:CDS |
| ACAGAAATTGTTGGAGTATC+AGG | 0.295371 | 2_1:+16510968 | None:intergenic |
| TGACATCCGGTGAGTGAAAC+AGG | 0.295986 | 2_1:+16507612 | None:intergenic |
| GCAATTACAGATTCCATATC+TGG | 0.308033 | 2_1:-16508810 | Msa0198010:intron |
| CAAAGAATCTACAAATAATA+GGG | 0.313875 | 2_1:-16511104 | Msa0198010:CDS |
| GAGCTTCAAGAACTATTGAT+AGG | 0.314152 | 2_1:+16508931 | None:intergenic |
| CTTGGGCGGCGGTTGTTTGT+TGG | 0.320582 | 2_1:+16511286 | None:intergenic |
| GAGAATGAGAATTAGGGTTT+GGG | 0.323810 | 2_1:+16511068 | None:intergenic |
| GACCATGCTAAATACTAAAT+AGG | 0.329336 | 2_1:+16507647 | None:intergenic |
| TGAGAATGAGAATTAGGGTT+TGG | 0.332044 | 2_1:+16511067 | None:intergenic |
| ACACATTTGATTCTGTTGAT+AGG | 0.332539 | 2_1:-16507839 | Msa0198010:three_prime_UTR |
| AGCTGACTTCACGGGTTCTT+GGG | 0.332819 | 2_1:+16511269 | None:intergenic |
| TGGCATTAATCTTTGGGTAT+TGG | 0.344148 | 2_1:+16508519 | None:intergenic |
| GCTTCAAATAGGGACAAATT+TGG | 0.350036 | 2_1:-16507542 | Msa0198010:three_prime_UTR |
| TTTCATTATTCTTATTTGTA+TGG | 0.350557 | 2_1:+16507903 | None:intergenic |
| CGGTTAGTTTGAGTTCTTCT+GGG | 0.362620 | 2_1:-16510643 | Msa0198010:CDS |
| GAGAATGAGAATGAGAATTA+GGG | 0.363137 | 2_1:+16511062 | None:intergenic |
| TGAAATGTTTGCTTCAAATA+GGG | 0.368682 | 2_1:-16507552 | Msa0198010:three_prime_UTR |
| TTGAATGTAGTTGAATTAGT+TGG | 0.373137 | 2_1:+16507930 | None:intergenic |
| TCACTCTCGGAACGCAGTTC+AGG | 0.373502 | 2_1:+16510758 | None:intergenic |
| TTCTGGGATTGATCATTTGT+TGG | 0.374550 | 2_1:-16510627 | Msa0198010:CDS |
| GGCGGCGGAGGCGGTGGAGG+GGG | 0.376506 | 2_1:+16511310 | None:intergenic |
| TGTTGTTTGTGATGTTTGTT+TGG | 0.378057 | 2_1:+16511489 | None:intergenic |
| TTTGTTGGTGGCGGCGGAGG+CGG | 0.392098 | 2_1:+16511301 | None:intergenic |
| ATTGATCATTTGTTGGTAAG+AGG | 0.394111 | 2_1:-16510620 | Msa0198010:CDS |
| TCGATGAGTGGTGGAGGCAG+AGG | 0.394339 | 2_1:+16511231 | None:intergenic |
| TGGTGTTGTTGGTGATGATT+TGG | 0.396800 | 2_1:+16510923 | None:intergenic |
| GTTGGTGGCGGCGGAGGCGG+TGG | 0.396863 | 2_1:+16511304 | None:intergenic |
| TCACACTCACATGATGATAT+TGG | 0.401711 | 2_1:-16510806 | Msa0198010:CDS |
| TGAATGTAGTTGAATTAGTT+GGG | 0.404172 | 2_1:+16507931 | None:intergenic |
| CGTCGGAATCGTCACGTTGT+TGG | 0.409337 | 2_1:+16511206 | None:intergenic |
| TTGGTTTCTTGCATCGTGTT+TGG | 0.414522 | 2_1:+16511361 | None:intergenic |
| TGGCGGCGGAGGCGGTGGAG+GGG | 0.415170 | 2_1:+16511309 | None:intergenic |
| ATTCTTGAAGTTGTTGACTT+AGG | 0.416372 | 2_1:+16511031 | None:intergenic |
| CGGTTGTTTGTTGGTGGCGG+CGG | 0.417258 | 2_1:+16511295 | None:intergenic |
| TTGTTTGTTGGTGGCGGCGG+AGG | 0.419933 | 2_1:+16511298 | None:intergenic |
| GTTCCGAGAGTGATAGTGAT+AGG | 0.421821 | 2_1:-16510748 | Msa0198010:CDS |
| TTCTGAAAAGAATAACCAAT+TGG | 0.425342 | 2_1:+16511160 | None:intergenic |
| GTGGCGGCGGAGGCGGTGGA+GGG | 0.425789 | 2_1:+16511308 | None:intergenic |
| TCCGAATCTTCATTTCCAAT+TGG | 0.433639 | 2_1:-16511175 | Msa0198010:CDS |
| AGGTGGAGGAGTGTAGCTTA+AGG | 0.434456 | 2_1:-16507955 | Msa0198010:CDS |
| GCAGACCACTCATCCAGATA+TGG | 0.442975 | 2_1:+16508797 | None:intergenic |
| TCTGAATTAGCCAGAGTTGT+TGG | 0.445993 | 2_1:-16508161 | Msa0198010:CDS |
| GAAGAAAGGGTCTAGTCATC+AGG | 0.448090 | 2_1:-16510516 | Msa0198010:CDS |
| TAATAACAATTTGTCGCGTT+CGG | 0.450247 | 2_1:-16510663 | Msa0198010:CDS |
| GGTGGAGGAGTGTAGCTTAA+GGG | 0.454192 | 2_1:-16507954 | Msa0198010:CDS |
| ACCAATTGGAAATGAAGATT+CGG | 0.457568 | 2_1:+16511174 | None:intergenic |
| AAGATGAGGAAGAAGAAGAA+TGG | 0.458822 | 2_1:+16511426 | None:intergenic |
| GTCGGAAACATTGACGGCGT+TGG | 0.459489 | 2_1:+16511342 | None:intergenic |
| CTTGAAGTTGTTGACTTAGG+AGG | 0.460898 | 2_1:+16511034 | None:intergenic |
| GGGCGGCGGTTGTTTGTTGG+TGG | 0.462528 | 2_1:+16511289 | None:intergenic |
| CGATGAGTGGTGGAGGCAGA+GGG | 0.467478 | 2_1:+16511232 | None:intergenic |
| CGGCGGTTGTTTGTTGGTGG+CGG | 0.470831 | 2_1:+16511292 | None:intergenic |
| ATCTCTGAATTCAGCGCTAA+AGG | 0.473609 | 2_1:-16508560 | Msa0198010:CDS |
| CTCGACGAAACAGAAATTGT+TGG | 0.477715 | 2_1:+16510959 | None:intergenic |
| CCTTTCCTCGTATCCACCAC+AGG | 0.479630 | 2_1:+16510539 | None:intergenic |
| ACCACAGGTTTCGCAAATTG+TGG | 0.486841 | 2_1:+16510554 | None:intergenic |
| GCCTCAGTACGACTTCCAAC+TGG | 0.492734 | 2_1:-16508719 | Msa0198010:CDS |
| TGAATCTGGAGCTGACTTCA+CGG | 0.493642 | 2_1:+16511260 | None:intergenic |
| TTCGCAAATTGTGGAGCCAC+CGG | 0.496644 | 2_1:+16510563 | None:intergenic |
| TTGATCATTTGTTGGTAAGA+GGG | 0.498432 | 2_1:-16510619 | Msa0198010:CDS |
| TGCTTCTGTTTCAAAGCCGC+CGG | 0.500060 | 2_1:-16510582 | Msa0198010:CDS |
| GGATCCGTGGCTGAAAAGAT+TGG | 0.500461 | 2_1:-16510686 | Msa0198010:CDS |
| TAATAGACCTATGGTGTTGT+TGG | 0.502974 | 2_1:+16510912 | None:intergenic |
| TCTCTCCCTGTTTCACTCAC+CGG | 0.505557 | 2_1:-16507618 | Msa0198010:three_prime_UTR |
| CAGGTTGATGTAAGAGAGGT+GGG | 0.513674 | 2_1:-16508586 | Msa0198010:CDS |
| GAATTCAGCGCTAAAGGTGA+TGG | 0.521311 | 2_1:-16508554 | Msa0198010:CDS |
| ACCCTAACATTCCCACCAGT+TGG | 0.523927 | 2_1:+16508704 | None:intergenic |
| ATGAGTGGTGGAGGCAGAGG+GGG | 0.525153 | 2_1:+16511234 | None:intergenic |
| AGGGTTGTCGGAAACATTGA+CGG | 0.525303 | 2_1:+16511336 | None:intergenic |
| TCTTTCTCCTCCAACAACTC+TGG | 0.526227 | 2_1:+16508151 | None:intergenic |
| TTTATAATCGGTATCTGCAA+TGG | 0.526466 | 2_1:-16510469 | Msa0198010:CDS |
| TTGAAGTTGTTGACTTAGGA+GGG | 0.526929 | 2_1:+16511035 | None:intergenic |
| AGCTTCAAGAACTATTGATA+GGG | 0.529000 | 2_1:+16508932 | None:intergenic |
| GATACGAGGAAAGGGAAGAA+AGG | 0.529493 | 2_1:-16510530 | Msa0198010:CDS |
| TCTGGATGAGTGGTCTGCTA+TGG | 0.531196 | 2_1:-16508792 | Msa0198010:CDS |
| TGTTTGTTTGGAGAGTGTGT+GGG | 0.535878 | 2_1:+16511501 | None:intergenic |
| ATGTTTGTTTGGAGAGTGTG+TGG | 0.535932 | 2_1:+16511500 | None:intergenic |
| CTTCACGGGTTCTTGGGCGG+CGG | 0.539612 | 2_1:+16511275 | None:intergenic |
| GAATCTGGAGCTGACTTCAC+GGG | 0.542012 | 2_1:+16511261 | None:intergenic |
| CTCCCTATCACTATCACTCT+CGG | 0.544053 | 2_1:+16510745 | None:intergenic |
| TCCAACTGGTGGGAATGTTA+GGG | 0.545488 | 2_1:-16508705 | Msa0198010:intron |
| GTGAATTGCTAATAGACCTA+TGG | 0.549329 | 2_1:+16510903 | None:intergenic |
| TTCTGTTTCAAAGCCGCCGG+TGG | 0.553326 | 2_1:-16510579 | Msa0198010:CDS |
| GAATTAGCCAGAGTTGTTGG+AGG | 0.554021 | 2_1:-16508158 | Msa0198010:CDS |
| TTCTGTATTCTTATCAGTGT+AGG | 0.554718 | 2_1:-16507676 | Msa0198010:three_prime_UTR |
| GTCGAAGACACATAAGTCAC+AGG | 0.562104 | 2_1:-16508099 | Msa0198010:intron |
| AGCAAACATTTCATCATGCA+AGG | 0.567432 | 2_1:+16507562 | None:intergenic |
| AGCCTATTTAGTATTTAGCA+TGG | 0.570491 | 2_1:-16507649 | Msa0198010:three_prime_UTR |
| GGTTGATGTAAGAGAGGTGG+GGG | 0.575836 | 2_1:-16508584 | Msa0198010:CDS |
| TTCCGAGAGTGATAGTGATA+GGG | 0.576636 | 2_1:-16510747 | Msa0198010:CDS |
| CTGTGGTGGATACGAGGAAA+GGG | 0.580025 | 2_1:-16510538 | Msa0198010:CDS |
| AGGTCTTGAAGCACAAGGAG+TGG | 0.580164 | 2_1:+16510988 | None:intergenic |
| GCTTAGAACTTGAGCTTCTG+CGG | 0.588384 | 2_1:-16508965 | Msa0198010:CDS |
| AAATGCGCGATTCTGTGCAC+AGG | 0.589437 | 2_1:-16508992 | Msa0198010:CDS |
| ACGTTGTTGGCGTCGATGAG+TGG | 0.590653 | 2_1:+16511219 | None:intergenic |
| ATTTGAGTGACAGAAAGATG+AGG | 0.591570 | 2_1:+16511412 | None:intergenic |
| GCAAATTGTGGAGCCACCGG+CGG | 0.592460 | 2_1:+16510566 | None:intergenic |
| ACAGGTTGATGTAAGAGAGG+TGG | 0.592542 | 2_1:-16508587 | Msa0198010:intron |
| CAGCAATCTAATGTGAACAA+TGG | 0.594890 | 2_1:-16510707 | Msa0198010:CDS |
| TACCCAAAGATTAATGCCAA+AGG | 0.599367 | 2_1:-16508515 | Msa0198010:intron |
| ATACGAGGAAAGGGAAGAAA+GGG | 0.601091 | 2_1:-16510529 | Msa0198010:CDS |
| ATCATTACCCAAAACCTCAA+CGG | 0.603329 | 2_1:-16511463 | Msa0198010:five_prime_UTR |
| CGAAACCTGTGGTGGATACG+AGG | 0.605001 | 2_1:-16510544 | Msa0198010:CDS |
| AGAATGAGAATTAGGGTTTG+GGG | 0.606796 | 2_1:+16511069 | None:intergenic |
| TCAGTACGACTTCCAACTGG+TGG | 0.607617 | 2_1:-16508716 | Msa0198010:CDS |
| AGTGTCAATTCATTGTCAAG+AGG | 0.608236 | 2_1:-16510848 | Msa0198010:CDS |
| TTGGCGTCGATGAGTGGTGG+AGG | 0.608600 | 2_1:+16511225 | None:intergenic |
| CCTGTGGTGGATACGAGGAA+AGG | 0.615055 | 2_1:-16510539 | Msa0198010:CDS |
| TGATGATTCAATTGCAACTG+TGG | 0.615595 | 2_1:-16507869 | Msa0198010:three_prime_UTR |
| AGATTCCATATCTGGATGAG+TGG | 0.627424 | 2_1:-16508802 | Msa0198010:CDS |
| GCCACAGGTTGATGTAAGAG+AGG | 0.628799 | 2_1:-16508590 | Msa0198010:intron |
| CGAGAGTGATAGTGATAGGG+AGG | 0.629316 | 2_1:-16510744 | Msa0198010:CDS |
| GACATCCGGTGAGTGAAACA+GGG | 0.635450 | 2_1:+16507613 | None:intergenic |
| ACAATTTGCGAAACCTGTGG+TGG | 0.636454 | 2_1:-16510552 | Msa0198010:CDS |
| TTGTTGGCGTCGATGAGTGG+TGG | 0.640867 | 2_1:+16511222 | None:intergenic |
| GAGATTTGCAAATGCGAGAG+CGG | 0.641577 | 2_1:-16510447 | Msa0198010:CDS |
| GATGAGTGGTGGAGGCAGAG+GGG | 0.644163 | 2_1:+16511233 | None:intergenic |
| ATCATCACCAACAACACCAT+AGG | 0.653442 | 2_1:-16510919 | Msa0198010:CDS |
| TGACTTCACGGGTTCTTGGG+CGG | 0.654213 | 2_1:+16511272 | None:intergenic |
| TGTTGGTAAGAGGGTCTGAG+AGG | 0.657044 | 2_1:-16510610 | Msa0198010:CDS |
| AGAGCTCTTATTGAAGAGTG+CGG | 0.664795 | 2_1:-16508131 | Msa0198010:CDS |
| TATCAACAGAATCAAATGTG+TGG | 0.665340 | 2_1:+16507841 | None:intergenic |
| CAGTACGACTTCCAACTGGT+GGG | 0.671503 | 2_1:-16508715 | Msa0198010:CDS |
| ACCAGTTGGAAGTCGTACTG+AGG | 0.677338 | 2_1:+16508718 | None:intergenic |
| GCTCTTATTGAAGAGTGCGG+AGG | 0.680445 | 2_1:-16508128 | Msa0198010:CDS |
| TCCACAATTTGCGAAACCTG+TGG | 0.690401 | 2_1:-16510555 | Msa0198010:CDS |
| GTATCAGGTCTTGAAGCACA+AGG | 0.706581 | 2_1:+16510983 | None:intergenic |
| TAATGTGAACAATGGATCCG+TGG | 0.709448 | 2_1:-16510699 | Msa0198010:CDS |
| AGGTTGATGTAAGAGAGGTG+GGG | 0.716696 | 2_1:-16508585 | Msa0198010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAAATATACTTTTCA+TGG | + | chr2_1:16508682-16508701 | None:intergenic | 10.0% |
| !! | TGATTAAAAAAAAAAAAACT+TGG | - | chr2_1:16509543-16509562 | Msa0198010:intron | 10.0% |
| !! | ATGATTGTTTAATTATATGA+AGG | - | chr2_1:16508825-16508844 | Msa0198010:intron | 15.0% |
| !! | TTTAATTATATGAAGGATTA+CGG | - | chr2_1:16508832-16508851 | Msa0198010:intron | 15.0% |
| !!! | GCAAAATTTTATTAAAATTC+AGG | + | chr2_1:16509523-16509542 | None:intergenic | 15.0% |
| !!! | AAGTAATTTGTATATTGTTT+TGG | - | chr2_1:16510131-16510150 | Msa0198010:intron | 15.0% |
| !!! | TTTCATTATTCTTATTTGTA+TGG | + | chr2_1:16511066-16511085 | None:intergenic | 15.0% |
| !! | AAAACAAAAAAATTGCATAT+TGG | + | chr2_1:16511249-16511268 | None:intergenic | 15.0% |
| !! | TCAAAGAATCTACAAATAAT+AGG | - | chr2_1:16507861-16507880 | Msa0198010:three_prime_UTR | 20.0% |
| !! | CAAAGAATCTACAAATAATA+GGG | - | chr2_1:16507862-16507881 | Msa0198010:three_prime_UTR | 20.0% |
| !!! | CACTTAGAATGTTTTATAAT+CGG | - | chr2_1:16508485-16508504 | Msa0198010:intron | 20.0% |
| !! | ATAGTTAGATAGATAGTTAT+AGG | - | chr2_1:16508701-16508720 | Msa0198010:intron | 20.0% |
| !!! | CATTTTTATTGTTACATTGA+GGG | + | chr2_1:16509220-16509239 | None:intergenic | 20.0% |
| !! | AATGTAACAATAAAAATGCA+AGG | - | chr2_1:16509222-16509241 | Msa0198010:intron | 20.0% |
| !! | ATGTAACAATAAAAATGCAA+GGG | - | chr2_1:16509223-16509242 | Msa0198010:intron | 20.0% |
| !! | TGTGCAAGAAATTATTTAAA+AGG | - | chr2_1:16509267-16509286 | Msa0198010:intron | 20.0% |
| !! | AAAGATGCATAATTTGAATT+TGG | - | chr2_1:16509324-16509343 | Msa0198010:intron | 20.0% |
| !! | TTATCCATTTATTGAGAAAA+AGG | - | chr2_1:16511203-16511222 | Msa0198010:CDS | 20.0% |
| !! | TATCCATTTATTGAGAAAAA+GGG | - | chr2_1:16511204-16511223 | Msa0198010:CDS | 20.0% |
| ! | GAAGAATGGAAAGAAAAAAA+TGG | + | chr2_1:16507529-16507548 | None:intergenic | 25.0% |
| !! | TTCTGAAAAGAATAACCAAT+TGG | + | chr2_1:16507809-16507828 | None:intergenic | 25.0% |
| !!! | GTTGTTTAGATTTTATTTCC+TGG | - | chr2_1:16508581-16508600 | Msa0198010:CDS | 25.0% |
| !! | CTGTTATTTGATAAGAGATA+GGG | - | chr2_1:16508773-16508792 | Msa0198010:CDS | 25.0% |
| !! | TGTTATTTGATAAGAGATAG+GGG | - | chr2_1:16508774-16508793 | Msa0198010:CDS | 25.0% |
| !! | GAATGTGATTGTTAACATTT+TGG | + | chr2_1:16508919-16508938 | None:intergenic | 25.0% |
| ! | TTGTTAAACAACCAGAAAAT+TGG | - | chr2_1:16508984-16509003 | Msa0198010:CDS | 25.0% |
| ! | AGTAACAGTACTAATAGTTA+GGG | + | chr2_1:16509113-16509132 | None:intergenic | 25.0% |
| ! | AAGTAACAGTACTAATAGTT+AGG | + | chr2_1:16509114-16509133 | None:intergenic | 25.0% |
| ! | TAACTATTAGTACTGTTACT+TGG | - | chr2_1:16509113-16509132 | Msa0198010:intron | 25.0% |
| ! | ACAGTAGTTATGTAAGAATT+AGG | - | chr2_1:16509184-16509203 | Msa0198010:intron | 25.0% |
| !! | GCATTTTTATTGTTACATTG+AGG | + | chr2_1:16509221-16509240 | None:intergenic | 25.0% |
| ! | TGTAACAATAAAAATGCAAG+GGG | - | chr2_1:16509224-16509243 | Msa0198010:intron | 25.0% |
| ! | CATCACATCTTCATTTATAT+TGG | - | chr2_1:16509681-16509700 | Msa0198010:intron | 25.0% |
| ! | TTCATTTATATTGGTCATCA+CGG | - | chr2_1:16509690-16509709 | Msa0198010:intron | 25.0% |
| ! | TTTCAAATTATACTCCAGTA+AGG | - | chr2_1:16509722-16509741 | Msa0198010:intron | 25.0% |
| !!! | AAAGAAGCATTCAAAATCAT+TGG | + | chr2_1:16510072-16510091 | None:intergenic | 25.0% |
| ! | AATGAATAAGTATGGAAGAA+AGG | + | chr2_1:16510316-16510335 | None:intergenic | 25.0% |
| ! | TTTCTTCCATACTTATTCAT+TGG | - | chr2_1:16510315-16510334 | Msa0198010:intron | 25.0% |
| ! | TTCTTCCATACTTATTCATT+GGG | - | chr2_1:16510316-16510335 | Msa0198010:intron | 25.0% |
| !!! | TGGATTGGATTATAATGTTT+TGG | - | chr2_1:16510587-16510606 | Msa0198010:CDS | 25.0% |
| !!! | AAAGTTTTTTCAAAAACACC+AGG | - | chr2_1:16510759-16510778 | Msa0198010:CDS | 25.0% |
| ! | TGATTAATATTATGAAGTGC+TGG | + | chr2_1:16510972-16510991 | None:intergenic | 25.0% |
| ! | AGCACTTCATAATATTAATC+AGG | - | chr2_1:16510971-16510990 | Msa0198010:CDS | 25.0% |
| ! | TGAATGTAGTTGAATTAGTT+GGG | + | chr2_1:16511038-16511057 | None:intergenic | 25.0% |
| ! | TTGAATGTAGTTGAATTAGT+TGG | + | chr2_1:16511039-16511058 | None:intergenic | 25.0% |
| ! | ATCCATTTATTGAGAAAAAG+GGG | - | chr2_1:16511205-16511224 | Msa0198010:CDS | 25.0% |
| !!! | TTTTTGTTTTTTGCTATCTC+AGG | - | chr2_1:16511259-16511278 | Msa0198010:CDS | 25.0% |
| ! | TGTCAATAGAAAAAAGGAAT+AGG | - | chr2_1:16511372-16511391 | Msa0198010:exon | 25.0% |
| ! | ATGAAATGTTTGCTTCAAAT+AGG | - | chr2_1:16511413-16511432 | Msa0198010:five_prime_UTR | 25.0% |
| ! | TGAAATGTTTGCTTCAAATA+GGG | - | chr2_1:16511414-16511433 | Msa0198010:five_prime_UTR | 25.0% |
| ! | CACAAAAATGAAAGTTCAAA+AGG | + | chr2_1:16511457-16511476 | None:intergenic | 25.0% |
| ! | TGTTGTTTGTGATGTTTGTT+TGG | + | chr2_1:16507480-16507499 | None:intergenic | 30.0% |
| ACCAATTGGAAATGAAGATT+CGG | + | chr2_1:16507795-16507814 | None:intergenic | 30.0% | |
| GAGAATGAGAATGAGAATTA+GGG | + | chr2_1:16507907-16507926 | None:intergenic | 30.0% | |
| TGAGAATGAGAATGAGAATT+AGG | + | chr2_1:16507908-16507927 | None:intergenic | 30.0% | |
| !! | ATTCTTGAAGTTGTTGACTT+AGG | + | chr2_1:16507938-16507957 | None:intergenic | 30.0% |
| TAATAACAATTTGTCGCGTT+CGG | - | chr2_1:16508303-16508322 | Msa0198010:intron | 30.0% | |
| ! | ATTGATCATTTGTTGGTAAG+AGG | - | chr2_1:16508346-16508365 | Msa0198010:intron | 30.0% |
| ! | TTGATCATTTGTTGGTAAGA+GGG | - | chr2_1:16508347-16508366 | Msa0198010:intron | 30.0% |
| TTTATAATCGGTATCTGCAA+TGG | - | chr2_1:16508497-16508516 | Msa0198010:intron | 30.0% | |
| !! | CTTTTCATGGTATTTTCAAG+CGG | + | chr2_1:16508669-16508688 | None:intergenic | 30.0% |
| ! | GCTGTTATTTGATAAGAGAT+AGG | - | chr2_1:16508772-16508791 | Msa0198010:CDS | 30.0% |
| ! | TTGTGAAGTATCTTTCTAAC+GGG | + | chr2_1:16508896-16508915 | None:intergenic | 30.0% |
| ! | GTTGTGAAGTATCTTTCTAA+CGG | + | chr2_1:16508897-16508916 | None:intergenic | 30.0% |
| ACAATAATTTCACGAGTCTA+TGG | + | chr2_1:16508968-16508987 | None:intergenic | 30.0% | |
| CATCATTTAGTACCTATTAG+TGG | + | chr2_1:16509044-16509063 | None:intergenic | 30.0% | |
| CACTAATAGGTACTAAATGA+TGG | - | chr2_1:16509042-16509061 | Msa0198010:intron | 30.0% | |
| ! | TAGGTACTAAATGATGGAAT+TGG | - | chr2_1:16509048-16509067 | Msa0198010:intron | 30.0% |
| TAAGATATTGCCTCAATTTG+TGG | + | chr2_1:16509087-16509106 | None:intergenic | 30.0% | |
| ! | TAGTACTGTTACTTGGAAAT+TGG | - | chr2_1:16509120-16509139 | Msa0198010:intron | 30.0% |
| ! | CAAATTATGCATCTTTTGTG+AGG | + | chr2_1:16509320-16509339 | None:intergenic | 30.0% |
| AAGTAAGATTATGAACTGTC+TGG | + | chr2_1:16509393-16509412 | None:intergenic | 30.0% | |
| AACTCAACAAGAGGAATAAA+TGG | + | chr2_1:16509420-16509439 | None:intergenic | 30.0% | |
| TTATTCCTCTTGTTGAGTTA+AGG | - | chr2_1:16509421-16509440 | Msa0198010:intron | 30.0% | |
| TATTCCTCTTGTTGAGTTAA+GGG | - | chr2_1:16509422-16509441 | Msa0198010:intron | 30.0% | |
| CGAGTCTTGATTTATAAGAA+GGG | - | chr2_1:16509449-16509468 | Msa0198010:intron | 30.0% | |
| GAGTCTTGATTTATAAGAAG+GGG | - | chr2_1:16509450-16509469 | Msa0198010:intron | 30.0% | |
| AGTCTTGATTTATAAGAAGG+GGG | - | chr2_1:16509451-16509470 | Msa0198010:intron | 30.0% | |
| ATTACAATGCATAAGCAACT+TGG | - | chr2_1:16509483-16509502 | Msa0198010:intron | 30.0% | |
| !!! | TAAGGTTTAAGTGGCTTTTT+TGG | - | chr2_1:16509740-16509759 | Msa0198010:intron | 30.0% |
| TTTGGATAAGTACCAAACTT+AGG | - | chr2_1:16509758-16509777 | Msa0198010:intron | 30.0% | |
| TGTTTACATTCACTTTCACT+TGG | - | chr2_1:16509827-16509846 | Msa0198010:intron | 30.0% | |
| AGCTTCAAGAACTATTGATA+GGG | + | chr2_1:16510037-16510056 | None:intergenic | 30.0% | |
| TTCTATCAATGAAGCAATTC+AGG | - | chr2_1:16510213-16510232 | Msa0198010:intron | 30.0% | |
| ACTATCCCAATGAATAAGTA+TGG | + | chr2_1:16510324-16510343 | None:intergenic | 30.0% | |
| ATTAAAATGTCTAATGCCAC+AGG | - | chr2_1:16510361-16510380 | Msa0198010:intron | 30.0% | |
| AACCTTTGGCATTAATCTTT+GGG | + | chr2_1:16510456-16510475 | None:intergenic | 30.0% | |
| TAACCTTTGGCATTAATCTT+TGG | + | chr2_1:16510457-16510476 | None:intergenic | 30.0% | |
| TCTTTCATTTGTCTAACCTT+TGG | + | chr2_1:16510470-16510489 | None:intergenic | 30.0% | |
| TCTTGAGGTTATATGAAACT+TGG | - | chr2_1:16510567-16510586 | Msa0198010:CDS | 30.0% | |
| AGGTTATATGAAACTTGGAT+TGG | - | chr2_1:16510572-16510591 | Msa0198010:CDS | 30.0% | |
| ACTGACCAAAAAACATAGTA+GGG | + | chr2_1:16510630-16510649 | None:intergenic | 30.0% | |
| AACTGACCAAAAAACATAGT+AGG | + | chr2_1:16510631-16510650 | None:intergenic | 30.0% | |
| ! | TAACTTTCTCTAAGAGCAAA+AGG | - | chr2_1:16510660-16510679 | Msa0198010:CDS | 30.0% |
| CCACACATTATGAATGTTAT+AGG | + | chr2_1:16510707-16510726 | None:intergenic | 30.0% | |
| CCTATAACATTCATAATGTG+TGG | - | chr2_1:16510704-16510723 | Msa0198010:CDS | 30.0% | |
| !!! | AGGAAAGTGCTATATTTTTC+AGG | - | chr2_1:16510991-16511010 | Msa0198010:CDS | 30.0% |
| !!! | AAAGTGCTATATTTTTCAGG+TGG | - | chr2_1:16510994-16511013 | Msa0198010:CDS | 30.0% |
| TATCAACAGAATCAAATGTG+TGG | + | chr2_1:16511128-16511147 | None:intergenic | 30.0% | |
| ACACATTTGATTCTGTTGAT+AGG | - | chr2_1:16511127-16511146 | Msa0198010:CDS | 30.0% | |
| TGAAAGAAAAATGAATCTGC+AGG | + | chr2_1:16511177-16511196 | None:intergenic | 30.0% | |
| TTCTGTATTCTTATCAGTGT+AGG | - | chr2_1:16511290-16511309 | Msa0198010:CDS | 30.0% | |
| AGCCTATTTAGTATTTAGCA+TGG | - | chr2_1:16511317-16511336 | Msa0198010:CDS | 30.0% | |
| GACCATGCTAAATACTAAAT+AGG | + | chr2_1:16511322-16511341 | None:intergenic | 30.0% | |
| !!! | TCCTTTTTTCTATTGACATC+CGG | + | chr2_1:16511370-16511389 | None:intergenic | 30.0% |
| ATCATTACCCAAAACCTCAA+CGG | - | chr2_1:16507503-16507522 | Msa0198010:three_prime_UTR | 35.0% | |
| AAAGAAAAAAATGGCCGTTG+AGG | + | chr2_1:16507520-16507539 | None:intergenic | 35.0% | |
| AAGATGAGGAAGAAGAAGAA+TGG | + | chr2_1:16507543-16507562 | None:intergenic | 35.0% | |
| ATTTGAGTGACAGAAAGATG+AGG | + | chr2_1:16507557-16507576 | None:intergenic | 35.0% | |
| TCCGAATCTTCATTTCCAAT+TGG | - | chr2_1:16507791-16507810 | Msa0198010:three_prime_UTR | 35.0% | |
| AGAATGAGAATTAGGGTTTG+GGG | + | chr2_1:16507900-16507919 | None:intergenic | 35.0% | |
| GAGAATGAGAATTAGGGTTT+GGG | + | chr2_1:16507901-16507920 | None:intergenic | 35.0% | |
| TGAGAATGAGAATTAGGGTT+TGG | + | chr2_1:16507902-16507921 | None:intergenic | 35.0% | |
| !! | TTGAAGTTGTTGACTTAGGA+GGG | + | chr2_1:16507934-16507953 | None:intergenic | 35.0% |
| ! | ACAGAAATTGTTGGAGTATC+AGG | + | chr2_1:16508001-16508020 | None:intergenic | 35.0% |
| !! | TAATAGACCTATGGTGTTGT+TGG | + | chr2_1:16508057-16508076 | None:intergenic | 35.0% |
| GTGAATTGCTAATAGACCTA+TGG | + | chr2_1:16508066-16508085 | None:intergenic | 35.0% | |
| AGTGTCAATTCATTGTCAAG+AGG | - | chr2_1:16508118-16508137 | Msa0198010:CDS | 35.0% | |
| TCACACTCACATGATGATAT+TGG | - | chr2_1:16508160-16508179 | Msa0198010:CDS | 35.0% | |
| CAGCAATCTAATGTGAACAA+TGG | - | chr2_1:16508259-16508278 | Msa0198010:intron | 35.0% | |
| ! | ATTACCAATCTTTTCAGCCA+CGG | + | chr2_1:16508287-16508306 | None:intergenic | 35.0% |
| !! | TTCTGGGATTGATCATTTGT+TGG | - | chr2_1:16508339-16508358 | Msa0198010:intron | 35.0% |
| ! | GTTGTTACTTGTCAATAACC+AGG | + | chr2_1:16508602-16508621 | None:intergenic | 35.0% |
| ! | TGTGAAGTATCTTTCTAACG+GGG | + | chr2_1:16508895-16508914 | None:intergenic | 35.0% |
| ! | ACAACCAGAAAATTGGTTCT+TGG | - | chr2_1:16508991-16509010 | Msa0198010:CDS | 35.0% |
| ! | CAACCAGAAAATTGGTTCTT+GGG | - | chr2_1:16508992-16509011 | Msa0198010:CDS | 35.0% |
| ! | AGAAAATTGGTTCTTGGGAT+CGG | - | chr2_1:16508997-16509016 | Msa0198010:CDS | 35.0% |
| ATGGAATTGGAGATTAGAGA+AGG | - | chr2_1:16509061-16509080 | Msa0198010:intron | 35.0% | |
| TACTTGGAAATTGGTAGACA+TGG | - | chr2_1:16509129-16509148 | Msa0198010:intron | 35.0% | |
| ! | CTACTGTATAGTTTGCAACT+TGG | + | chr2_1:16509171-16509190 | None:intergenic | 35.0% |
| !!! | TTTTGTGAGGCACTGTTATA+AGG | + | chr2_1:16509307-16509326 | None:intergenic | 35.0% |
| GCGAGTCTTGATTTATAAGA+AGG | - | chr2_1:16509448-16509467 | Msa0198010:intron | 35.0% | |
| GTCTTGATTTATAAGAAGGG+GGG | - | chr2_1:16509452-16509471 | Msa0198010:intron | 35.0% | |
| TCTTGATTTATAAGAAGGGG+GGG | - | chr2_1:16509453-16509472 | Msa0198010:intron | 35.0% | |
| !! | AGTTTAGAACTGCTTTTGAG+TGG | + | chr2_1:16509624-16509643 | None:intergenic | 35.0% |
| ATACTCCAGTAAGGTTTAAG+TGG | - | chr2_1:16509731-16509750 | Msa0198010:intron | 35.0% | |
| AAAAGCCACTTAAACCTTAC+TGG | + | chr2_1:16509739-16509758 | None:intergenic | 35.0% | |
| GACACATTTGAACCTAAGTT+TGG | + | chr2_1:16509773-16509792 | None:intergenic | 35.0% | |
| ! | TTCTGACACGGTTTAAAATC+TGG | - | chr2_1:16509850-16509869 | Msa0198010:intron | 35.0% |
| ! | TCTGACACGGTTTAAAATCT+GGG | - | chr2_1:16509851-16509870 | Msa0198010:intron | 35.0% |
| !! | AAAGTGACAAGAAGAGCATT+AGG | + | chr2_1:16509894-16509913 | None:intergenic | 35.0% |
| AGAAAATAGTGCTTTCTGCA+AGG | + | chr2_1:16509935-16509954 | None:intergenic | 35.0% | |
| GAGCTTCAAGAACTATTGAT+AGG | + | chr2_1:16510038-16510057 | None:intergenic | 35.0% | |
| GCAATTACAGATTCCATATC+TGG | - | chr2_1:16510156-16510175 | Msa0198010:intron | 35.0% | |
| GGTATGATTAAAACTCCAAC+TGG | - | chr2_1:16510282-16510301 | Msa0198010:intron | 35.0% | |
| TGGCATTAATCTTTGGGTAT+TGG | + | chr2_1:16510450-16510469 | None:intergenic | 35.0% | |
| TACCCAAAGATTAATGCCAA+AGG | - | chr2_1:16510451-16510470 | Msa0198010:CDS | 35.0% | |
| CTGACCAAAAAACATAGTAG+GGG | + | chr2_1:16510629-16510648 | None:intergenic | 35.0% | |
| GCAAGCATTCTACATAAAAC+TGG | + | chr2_1:16510943-16510962 | None:intergenic | 35.0% | |
| TGATGATTCAATTGCAACTG+TGG | - | chr2_1:16511097-16511116 | Msa0198010:CDS | 35.0% | |
| ! | CTCCCCTTTTTCTCAATAAA+TGG | + | chr2_1:16511210-16511229 | None:intergenic | 35.0% |
| ACCGGATGTCAATAGAAAAA+AGG | - | chr2_1:16511366-16511385 | Msa0198010:exon | 35.0% | |
| AGCAAACATTTCATCATGCA+AGG | + | chr2_1:16511407-16511426 | None:intergenic | 35.0% | |
| GCTTCAAATAGGGACAAATT+TGG | - | chr2_1:16511424-16511443 | Msa0198010:five_prime_UTR | 35.0% | |
| ! | TGTTTGTTTGGAGAGTGTGT+GGG | + | chr2_1:16507468-16507487 | None:intergenic | 40.0% |
| ! | ATGTTTGTTTGGAGAGTGTG+TGG | + | chr2_1:16507469-16507488 | None:intergenic | 40.0% |
| ! | AAAATGGCCGTTGAGGTTTT+GGG | + | chr2_1:16507513-16507532 | None:intergenic | 40.0% |
| ! | AAAAATGGCCGTTGAGGTTT+TGG | + | chr2_1:16507514-16507533 | None:intergenic | 40.0% |
| TTGGTTTCTTGCATCGTGTT+TGG | + | chr2_1:16507608-16507627 | None:intergenic | 40.0% | |
| ! | AGATTCGGAATTTTCGTCGT+CGG | + | chr2_1:16507780-16507799 | None:intergenic | 40.0% |
| !! | CTTGAAGTTGTTGACTTAGG+AGG | + | chr2_1:16507935-16507954 | None:intergenic | 40.0% |
| CTCGACGAAACAGAAATTGT+TGG | + | chr2_1:16508010-16508029 | None:intergenic | 40.0% | |
| !! | TGGTGTTGTTGGTGATGATT+TGG | + | chr2_1:16508046-16508065 | None:intergenic | 40.0% |
| ATCATCACCAACAACACCAT+AGG | - | chr2_1:16508047-16508066 | Msa0198010:intron | 40.0% | |
| TTCTTCAGCTGCTACGAAAT+TGG | - | chr2_1:16508087-16508106 | Msa0198010:intron | 40.0% | |
| ! | TTCCGAGAGTGATAGTGATA+GGG | - | chr2_1:16508219-16508238 | Msa0198010:intron | 40.0% |
| TAATGTGAACAATGGATCCG+TGG | - | chr2_1:16508267-16508286 | Msa0198010:intron | 40.0% | |
| !! | TCGGTTAGTTTGAGTTCTTC+TGG | - | chr2_1:16508322-16508341 | Msa0198010:intron | 40.0% |
| !! | CGGTTAGTTTGAGTTCTTCT+GGG | - | chr2_1:16508323-16508342 | Msa0198010:intron | 40.0% |
| ATACGAGGAAAGGGAAGAAA+GGG | - | chr2_1:16508437-16508456 | Msa0198010:intron | 40.0% | |
| AGTTCAGCAAAAAGAATGCG+AGG | - | chr2_1:16508555-16508574 | Msa0198010:CDS | 40.0% | |
| GATAGTTATAGGAGTCTCTG+TGG | - | chr2_1:16508712-16508731 | Msa0198010:CDS | 40.0% | |
| CAATTCTCTGCTGAATTGTG+TGG | - | chr2_1:16508738-16508757 | Msa0198010:CDS | 40.0% | |
| AATACCACATGACTTCGCAT+CGG | + | chr2_1:16508800-16508819 | None:intergenic | 40.0% | |
| ! | GATCCCAAGAACCAATTTTC+TGG | + | chr2_1:16508998-16509017 | None:intergenic | 40.0% |
| CCTATTAGTGGTAGAGTTGT+TGG | + | chr2_1:16509032-16509051 | None:intergenic | 40.0% | |
| CCAACAACTCTACCACTAAT+AGG | - | chr2_1:16509029-16509048 | Msa0198010:CDS | 40.0% | |
| TTAGAGAAGGCCACAAATTG+AGG | - | chr2_1:16509074-16509093 | Msa0198010:intron | 40.0% | |
| !! | AGGGGTACTTCTGTGATAAA+TGG | - | chr2_1:16509242-16509261 | Msa0198010:intron | 40.0% |
| !! | ACTTTCACTTGGTTCTGACA+CGG | - | chr2_1:16509838-16509857 | Msa0198010:intron | 40.0% |
| AGATTCCATATCTGGATGAG+TGG | - | chr2_1:16510164-16510183 | Msa0198010:intron | 40.0% | |
| AGAAAGGAAATAGTGCCAGT+TGG | + | chr2_1:16510300-16510319 | None:intergenic | 40.0% | |
| ATCTCTGAATTCAGCGCTAA+AGG | - | chr2_1:16510406-16510425 | Msa0198010:intron | 40.0% | |
| TTCGCTTCAAACCATCAGTT+TGG | - | chr2_1:16510521-16510540 | Msa0198010:CDS | 40.0% | |
| ACCATCAGTTTGGTATTCCA+TGG | - | chr2_1:16510531-16510550 | Msa0198010:CDS | 40.0% | |
| ACCATGGAATACCAAACTGA+TGG | + | chr2_1:16510535-16510554 | None:intergenic | 40.0% | |
| CAAAAAACATAGTAGGGGTG+AGG | + | chr2_1:16510624-16510643 | None:intergenic | 40.0% | |
| !!! | CTCACCCCTACTATGTTTTT+TGG | - | chr2_1:16510622-16510641 | Msa0198010:CDS | 40.0% |
| ! | AAGTATCTGTTTCTTCTGCC+TGG | + | chr2_1:16510780-16510799 | None:intergenic | 40.0% |
| TCTGAATTAGCCAGAGTTGT+TGG | - | chr2_1:16510805-16510824 | Msa0198010:CDS | 40.0% | |
| AGAGCTCTTATTGAAGAGTG+CGG | - | chr2_1:16510835-16510854 | Msa0198010:CDS | 40.0% | |
| TTCTCTACAGTAACCATGGA+TGG | + | chr2_1:16510910-16510929 | None:intergenic | 40.0% | |
| GTCATTCTCTACAGTAACCA+TGG | + | chr2_1:16510914-16510933 | None:intergenic | 40.0% | |
| !!! | GTGCTATATTTTTCAGGTGG+AGG | - | chr2_1:16510997-16511016 | Msa0198010:CDS | 40.0% |
| TATTGAGAAAAAGGGGAGAG+AGG | - | chr2_1:16511212-16511231 | Msa0198010:CDS | 40.0% | |
| AGGGTTGTCGGAAACATTGA+CGG | + | chr2_1:16507633-16507652 | None:intergenic | 45.0% | |
| ! | TGAATCTGGAGCTGACTTCA+CGG | + | chr2_1:16507709-16507728 | None:intergenic | 45.0% |
| GTATCAGGTCTTGAAGCACA+AGG | + | chr2_1:16507986-16508005 | None:intergenic | 45.0% | |
| ! | GTTCCGAGAGTGATAGTGAT+AGG | - | chr2_1:16508218-16508237 | Msa0198010:intron | 45.0% |
| CTCCCTATCACTATCACTCT+CGG | + | chr2_1:16508224-16508243 | None:intergenic | 45.0% | |
| TCCACAATTTGCGAAACCTG+TGG | - | chr2_1:16508411-16508430 | Msa0198010:intron | 45.0% | |
| ACCACAGGTTTCGCAAATTG+TGG | + | chr2_1:16508415-16508434 | None:intergenic | 45.0% | |
| ACAATTTGCGAAACCTGTGG+TGG | - | chr2_1:16508414-16508433 | Msa0198010:intron | 45.0% | |
| GATACGAGGAAAGGGAAGAA+AGG | - | chr2_1:16508436-16508455 | Msa0198010:intron | 45.0% | |
| GAAGAAAGGGTCTAGTCATC+AGG | - | chr2_1:16508450-16508469 | Msa0198010:intron | 45.0% | |
| GAGATTTGCAAATGCGAGAG+CGG | - | chr2_1:16508519-16508538 | Msa0198010:CDS | 45.0% | |
| GAATTGTGTGGTTGTGTTGC+TGG | - | chr2_1:16508750-16508769 | Msa0198010:CDS | 45.0% | |
| TTCTAACGGGGCAACTAAGT+TGG | + | chr2_1:16508883-16508902 | None:intergenic | 45.0% | |
| CACTCCCTTAACTCAACAAG+AGG | + | chr2_1:16509429-16509448 | None:intergenic | 45.0% | |
| !! | GTGACAAGAAGAGCATTAGG+TGG | + | chr2_1:16509891-16509910 | None:intergenic | 45.0% |
| GCTTAGAACTTGAGCTTCTG+CGG | - | chr2_1:16510001-16510020 | Msa0198010:intron | 45.0% | |
| TTCCAACTGGTGGGAATGTT+AGG | - | chr2_1:16510260-16510279 | Msa0198010:intron | 45.0% | |
| TCCAACTGGTGGGAATGTTA+GGG | - | chr2_1:16510261-16510280 | Msa0198010:intron | 45.0% | |
| ACCTCTCTTACATCAACCTG+TGG | + | chr2_1:16510380-16510399 | None:intergenic | 45.0% | |
| !! | ACAGGTTGATGTAAGAGAGG+TGG | - | chr2_1:16510379-16510398 | Msa0198010:intron | 45.0% |
| !! | CAGGTTGATGTAAGAGAGGT+GGG | - | chr2_1:16510380-16510399 | Msa0198010:intron | 45.0% |
| !! | AGGTTGATGTAAGAGAGGTG+GGG | - | chr2_1:16510381-16510400 | Msa0198010:intron | 45.0% |
| GAATTCAGCGCTAAAGGTGA+TGG | - | chr2_1:16510412-16510431 | Msa0198010:CDS | 45.0% | |
| TAACCTCAAGACTGCAGTGT+TGG | + | chr2_1:16510558-16510577 | None:intergenic | 45.0% | |
| GAATTAGCCAGAGTTGTTGG+AGG | - | chr2_1:16510808-16510827 | Msa0198010:CDS | 45.0% | |
| TCTTTCTCCTCCAACAACTC+TGG | + | chr2_1:16510818-16510837 | None:intergenic | 45.0% | |
| GTCGAAGACACATAAGTCAC+AGG | - | chr2_1:16510867-16510886 | Msa0198010:CDS | 45.0% | |
| ! | AGCTGACTTCACGGGTTCTT+GGG | + | chr2_1:16507700-16507719 | None:intergenic | 50.0% |
| ! | GAATCTGGAGCTGACTTCAC+GGG | + | chr2_1:16507708-16507727 | None:intergenic | 50.0% |
| AGGTCTTGAAGCACAAGGAG+TGG | + | chr2_1:16507981-16508000 | None:intergenic | 50.0% | |
| ! | CGAGAGTGATAGTGATAGGG+AGG | - | chr2_1:16508222-16508241 | Msa0198010:intron | 50.0% |
| GGATCCGTGGCTGAAAAGAT+TGG | - | chr2_1:16508280-16508299 | Msa0198010:intron | 50.0% | |
| ! | TGTTGGTAAGAGGGTCTGAG+AGG | - | chr2_1:16508356-16508375 | Msa0198010:intron | 50.0% |
| TGCTTCTGTTTCAAAGCCGC+CGG | - | chr2_1:16508384-16508403 | Msa0198010:intron | 50.0% | |
| TTCGCAAATTGTGGAGCCAC+CGG | + | chr2_1:16508406-16508425 | None:intergenic | 50.0% | |
| !! | CTGTGGTGGATACGAGGAAA+GGG | - | chr2_1:16508428-16508447 | Msa0198010:intron | 50.0% |
| ! | GGGGCAACTAAGTTGGCAAT+TGG | + | chr2_1:16508876-16508895 | None:intergenic | 50.0% |
| AAATGCGCGATTCTGTGCAC+AGG | - | chr2_1:16509974-16509993 | Msa0198010:intron | 50.0% | |
| GCAGACCACTCATCCAGATA+TGG | + | chr2_1:16510172-16510191 | None:intergenic | 50.0% | |
| TCTGGATGAGTGGTCTGCTA+TGG | - | chr2_1:16510174-16510193 | Msa0198010:intron | 50.0% | |
| ACCAGTTGGAAGTCGTACTG+AGG | + | chr2_1:16510251-16510270 | None:intergenic | 50.0% | |
| TCAGTACGACTTCCAACTGG+TGG | - | chr2_1:16510250-16510269 | Msa0198010:intron | 50.0% | |
| CAGTACGACTTCCAACTGGT+GGG | - | chr2_1:16510251-16510270 | Msa0198010:intron | 50.0% | |
| ACCCTAACATTCCCACCAGT+TGG | + | chr2_1:16510265-16510284 | None:intergenic | 50.0% | |
| !! | GCCACAGGTTGATGTAAGAG+AGG | - | chr2_1:16510376-16510395 | Msa0198010:intron | 50.0% |
| ! | GGTTGATGTAAGAGAGGTGG+GGG | - | chr2_1:16510382-16510401 | Msa0198010:intron | 50.0% |
| ! | AAGACTGCAGTGTTGGACCA+TGG | + | chr2_1:16510551-16510570 | None:intergenic | 50.0% |
| ! | GCTCTTATTGAAGAGTGCGG+AGG | - | chr2_1:16510838-16510857 | Msa0198010:CDS | 50.0% |
| TGTTGCACACGATCCATCCA+TGG | - | chr2_1:16510894-16510913 | Msa0198010:CDS | 50.0% | |
| ! | AGGTGGAGGAGTGTAGCTTA+AGG | - | chr2_1:16511011-16511030 | Msa0198010:CDS | 50.0% |
| ! | GGTGGAGGAGTGTAGCTTAA+GGG | - | chr2_1:16511012-16511031 | Msa0198010:CDS | 50.0% |
| TCTCTCCCTGTTTCACTCAC+CGG | - | chr2_1:16511348-16511367 | Msa0198010:CDS | 50.0% | |
| GACATCCGGTGAGTGAAACA+GGG | + | chr2_1:16511356-16511375 | None:intergenic | 50.0% | |
| TGACATCCGGTGAGTGAAAC+AGG | + | chr2_1:16511357-16511376 | None:intergenic | 50.0% | |
| GTCGGAAACATTGACGGCGT+TGG | + | chr2_1:16507627-16507646 | None:intergenic | 55.0% | |
| TGACTTCACGGGTTCTTGGG+CGG | + | chr2_1:16507697-16507716 | None:intergenic | 55.0% | |
| ! | GAGCTGACTTCACGGGTTCT+TGG | + | chr2_1:16507701-16507720 | None:intergenic | 55.0% |
| !! | TTGTTGGCGTCGATGAGTGG+TGG | + | chr2_1:16507747-16507766 | None:intergenic | 55.0% |
| !! | ACGTTGTTGGCGTCGATGAG+TGG | + | chr2_1:16507750-16507769 | None:intergenic | 55.0% |
| CGTCGGAATCGTCACGTTGT+TGG | + | chr2_1:16507763-16507782 | None:intergenic | 55.0% | |
| TCACTCTCGGAACGCAGTTC+AGG | + | chr2_1:16508211-16508230 | None:intergenic | 55.0% | |
| TTCTGTTTCAAAGCCGCCGG+TGG | - | chr2_1:16508387-16508406 | Msa0198010:intron | 55.0% | |
| !! | CGAAACCTGTGGTGGATACG+AGG | - | chr2_1:16508422-16508441 | Msa0198010:intron | 55.0% |
| CCTTTCCTCGTATCCACCAC+AGG | + | chr2_1:16508430-16508449 | None:intergenic | 55.0% | |
| !! | CCTGTGGTGGATACGAGGAA+AGG | - | chr2_1:16508427-16508446 | Msa0198010:intron | 55.0% |
| GCCTCAGTACGACTTCCAAC+TGG | - | chr2_1:16510247-16510266 | Msa0198010:intron | 55.0% | |
| GGTCCAACACTGCAGTCTTG+AGG | - | chr2_1:16510552-16510571 | Msa0198010:CDS | 55.0% | |
| TGGAGGGGGAGTAGGGTTGT+CGG | + | chr2_1:16507645-16507664 | None:intergenic | 60.0% | |
| !! | TTGTTTGTTGGTGGCGGCGG+AGG | + | chr2_1:16507671-16507690 | None:intergenic | 60.0% |
| !! | CGGTTGTTTGTTGGTGGCGG+CGG | + | chr2_1:16507674-16507693 | None:intergenic | 60.0% |
| ! | CGGCGGTTGTTTGTTGGTGG+CGG | + | chr2_1:16507677-16507696 | None:intergenic | 60.0% |
| CTTGGGCGGCGGTTGTTTGT+TGG | + | chr2_1:16507683-16507702 | None:intergenic | 60.0% | |
| GGCAGAGGGGGTCATGAATC+TGG | + | chr2_1:16507723-16507742 | None:intergenic | 60.0% | |
| ! | ATGAGTGGTGGAGGCAGAGG+GGG | + | chr2_1:16507735-16507754 | None:intergenic | 60.0% |
| ! | GATGAGTGGTGGAGGCAGAG+GGG | + | chr2_1:16507736-16507755 | None:intergenic | 60.0% |
| ! | CGATGAGTGGTGGAGGCAGA+GGG | + | chr2_1:16507737-16507756 | None:intergenic | 60.0% |
| ! | TCGATGAGTGGTGGAGGCAG+AGG | + | chr2_1:16507738-16507757 | None:intergenic | 60.0% |
| !! | TTGGCGTCGATGAGTGGTGG+AGG | + | chr2_1:16507744-16507763 | None:intergenic | 60.0% |
| GCAAATTGTGGAGCCACCGG+CGG | + | chr2_1:16508403-16508422 | None:intergenic | 60.0% | |
| !! | TTTGTTGGTGGCGGCGGAGG+CGG | + | chr2_1:16507668-16507687 | None:intergenic | 65.0% |
| ! | GGGCGGCGGTTGTTTGTTGG+TGG | + | chr2_1:16507680-16507699 | None:intergenic | 65.0% |
| CTTCACGGGTTCTTGGGCGG+CGG | + | chr2_1:16507694-16507713 | None:intergenic | 65.0% | |
| GGGGCCGATGCGAAGTCATG+TGG | - | chr2_1:16508793-16508812 | Msa0198010:CDS | 65.0% | |
| GAGGCGGTGGAGGGGGAGTA+GGG | + | chr2_1:16507652-16507671 | None:intergenic | 70.0% | |
| GGAGGCGGTGGAGGGGGAGT+AGG | + | chr2_1:16507653-16507672 | None:intergenic | 75.0% | |
| ! | TGGCGGCGGAGGCGGTGGAG+GGG | + | chr2_1:16507660-16507679 | None:intergenic | 80.0% |
| ! | GTGGCGGCGGAGGCGGTGGA+GGG | + | chr2_1:16507661-16507680 | None:intergenic | 80.0% |
| !!! | GTTGGTGGCGGCGGAGGCGG+TGG | + | chr2_1:16507665-16507684 | None:intergenic | 80.0% |
| ! | GGCGGCGGAGGCGGTGGAGG+GGG | + | chr2_1:16507659-16507678 | None:intergenic | 85.0% |
| !! | GGTGGCGGCGGAGGCGGTGG+AGG | + | chr2_1:16507662-16507681 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 16507459 | 16511529 | 16507459 | ID=Msa0198010;Name=Msa0198010 |
| chr2_1 | mRNA | 16507459 | 16511529 | 16507459 | ID=Msa0198010-mRNA-1;Parent=Msa0198010;Name=Msa0198010-mRNA-1;_AED=0.01;_eAED=0.01;_QI=155|1|1|1|0.8|0.83|6|430|494 |
| chr2_1 | exon | 16507459 | 16507975 | 16507459 | ID=Msa0198010-mRNA-1:exon:6821;Parent=Msa0198010-mRNA-1 |
| chr2_1 | exon | 16508100 | 16508207 | 16508100 | ID=Msa0198010-mRNA-1:exon:6820;Parent=Msa0198010-mRNA-1 |
| chr2_1 | exon | 16508516 | 16508605 | 16508516 | ID=Msa0198010-mRNA-1:exon:6819;Parent=Msa0198010-mRNA-1 |
| chr2_1 | exon | 16508706 | 16508822 | 16508706 | ID=Msa0198010-mRNA-1:exon:6818;Parent=Msa0198010-mRNA-1 |
| chr2_1 | exon | 16508929 | 16509048 | 16508929 | ID=Msa0198010-mRNA-1:exon:6817;Parent=Msa0198010-mRNA-1 |
| chr2_1 | exon | 16510412 | 16511529 | 16510412 | ID=Msa0198010-mRNA-1:exon:6816;Parent=Msa0198010-mRNA-1 |
| chr2_1 | five_prime_UTR | 16511375 | 16511529 | 16511375 | ID=Msa0198010-mRNA-1:five_prime_utr;Parent=Msa0198010-mRNA-1 |
| chr2_1 | CDS | 16510412 | 16511374 | 16510412 | ID=Msa0198010-mRNA-1:cds;Parent=Msa0198010-mRNA-1 |
| chr2_1 | CDS | 16508929 | 16509048 | 16508929 | ID=Msa0198010-mRNA-1:cds;Parent=Msa0198010-mRNA-1 |
| chr2_1 | CDS | 16508706 | 16508822 | 16508706 | ID=Msa0198010-mRNA-1:cds;Parent=Msa0198010-mRNA-1 |
| chr2_1 | CDS | 16508516 | 16508605 | 16508516 | ID=Msa0198010-mRNA-1:cds;Parent=Msa0198010-mRNA-1 |
| chr2_1 | CDS | 16508100 | 16508207 | 16508100 | ID=Msa0198010-mRNA-1:cds;Parent=Msa0198010-mRNA-1 |
| chr2_1 | CDS | 16507889 | 16507975 | 16507889 | ID=Msa0198010-mRNA-1:cds;Parent=Msa0198010-mRNA-1 |
| chr2_1 | three_prime_UTR | 16507459 | 16507888 | 16507459 | ID=Msa0198010-mRNA-1:three_prime_utr;Parent=Msa0198010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
