Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198490 | XP_003594539.1 | 95.146 | 412 | 2 | 1 | 1 | 412 | 1 | 394 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198490 | sp|Q9SA73|OLA1_ARATH | 81.553 | 412 | 58 | 1 | 1 | 412 | 1 | 394 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198490 | G7IKV9 | 95.146 | 412 | 2 | 1 | 1 | 412 | 1 | 394 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0198490 | Msa0278770 | 0.996701 | 4.989891e-231 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198490 | MtrunA17_Chr2g0292511 | 95.146 | 412 | 2 | 1 | 1 | 412 | 1 | 394 | 0.0 | 801 |
| Msa0198490 | MtrunA17_Chr8g0358201 | 40.310 | 387 | 207 | 6 | 25 | 406 | 50 | 417 | 2.22e-88 | 274 |
| Msa0198490 | MtrunA17_Chr1g0155741 | 32.847 | 137 | 73 | 3 | 27 | 163 | 272 | 389 | 1.42e-12 | 69.3 |
| Msa0198490 | MtrunA17_Chr2g0286181 | 30.986 | 142 | 77 | 3 | 27 | 167 | 321 | 442 | 2.75e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198490 | AT1G30580.1 | 81.553 | 412 | 58 | 1 | 1 | 412 | 1 | 394 | 0.0 | 702 |
| Msa0198490 | AT1G56050.1 | 39.447 | 398 | 217 | 6 | 14 | 406 | 43 | 421 | 2.65e-90 | 279 |
| Msa0198490 | AT1G07615.1 | 33.000 | 100 | 50 | 1 | 27 | 126 | 306 | 388 | 3.34e-11 | 65.5 |
Find 121 sgRNAs with CRISPR-Local
Find 492 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCCAGTCTTTATTATTT+TGG | 0.087619 | 2_1:-17116381 | None:intergenic |
| TGCCACTAAAGGTGAATTTC+TGG | 0.187841 | 2_1:-17118134 | None:intergenic |
| TGCTTTGCAAATGTCGTTTC+AGG | 0.234512 | 2_1:+17117727 | Msa0198490:CDS |
| GAAACTTGTTCTTCTTTCTT+TGG | 0.236801 | 2_1:-17114809 | None:intergenic |
| TACGTACCATGTGTGAATTT+TGG | 0.247433 | 2_1:-17114835 | None:intergenic |
| AATTTCTCAAAAGAAATTAT+AGG | 0.273078 | 2_1:+17118471 | Msa0198490:three_prime_UTR |
| CTAACACGCAATACCTCAAT+AGG | 0.296014 | 2_1:-17118372 | None:intergenic |
| AGTGTAGACTTTCCAACATT+TGG | 0.320168 | 2_1:-17111384 | None:intergenic |
| AACTGGAGCTTCCTTCGATT+TGG | 0.332167 | 2_1:-17110347 | None:intergenic |
| TTCTCTTCTCACCTCAAGAT+TGG | 0.333366 | 2_1:+17110391 | Msa0198490:CDS |
| TTTGTCCACCACCATGTTCC+TGG | 0.334504 | 2_1:-17115193 | None:intergenic |
| AGAGTAAATTTGATGTGAAC+TGG | 0.336165 | 2_1:+17118421 | Msa0198490:three_prime_UTR |
| TGACCCTGTGAGGGATTTAG+AGG | 0.338036 | 2_1:+17111966 | Msa0198490:CDS |
| CAGCTTGAGGAGCCTTTGTT+AGG | 0.339703 | 2_1:-17117087 | None:intergenic |
| ATCCTTTCTCAAAATCAGTA+TGG | 0.361106 | 2_1:-17117120 | None:intergenic |
| AACCAGAAATTCACCTTTAG+TGG | 0.367060 | 2_1:+17118132 | Msa0198490:three_prime_UTR |
| CCAAGGATGGGTCGTTCAAC+TGG | 0.369239 | 2_1:-17110364 | None:intergenic |
| TCCTTCGATTTGGCGGATTT+AGG | 0.369949 | 2_1:-17110337 | None:intergenic |
| AGCCACTCAAAACGCTCGTC+AGG | 0.375759 | 2_1:-17111492 | None:intergenic |
| TCTCACATCCGGGCTGTTGA+TGG | 0.377798 | 2_1:+17111776 | Msa0198490:CDS |
| GCTCATGAGGGGCAAGGGTT+GGG | 0.388174 | 2_1:+17111740 | Msa0198490:CDS |
| TATATATACACCACTGATCT+AGG | 0.394557 | 2_1:+17117704 | Msa0198490:CDS |
| TCGTCTACGTGGATAATATC+TGG | 0.394590 | 2_1:-17111937 | None:intergenic |
| TGCCAAGCCTGTTGTATACT+TGG | 0.397853 | 2_1:+17113663 | Msa0198490:CDS |
| ATTGTTTATTATTAGGCTGC+TGG | 0.416370 | 2_1:+17118018 | Msa0198490:intron |
| CAGTATTTAGCCGCCTCATC+AGG | 0.422088 | 2_1:-17115263 | None:intergenic |
| CGAGCTTGAATGTTGTCAAA+AGG | 0.422523 | 2_1:+17112542 | Msa0198490:CDS |
| ACATTGACCCTTGCTTCATT+AGG | 0.424285 | 2_1:-17111468 | None:intergenic |
| ATTAGGCTCAATAGTGCAAA+AGG | 0.425631 | 2_1:-17111451 | None:intergenic |
| AAAATATAATGTCACCATCT+TGG | 0.441622 | 2_1:-17118074 | None:intergenic |
| ATGTGGATATTTACCTCATC+AGG | 0.442858 | 2_1:-17116440 | None:intergenic |
| CAGGCTTGGCAGTAAGCAAC+TGG | 0.446559 | 2_1:-17113651 | None:intergenic |
| AAGTTCAATGTTTCTGGTGG+AGG | 0.450367 | 2_1:+17118099 | Msa0198490:CDS |
| TGGAGCTTCCTTCGATTTGG+CGG | 0.453358 | 2_1:-17110344 | None:intergenic |
| TTGTTTGGTAGGTGCATTTG+AGG | 0.455060 | 2_1:+17111912 | Msa0198490:intron |
| TGCTCATGAGGGGCAAGGGT+TGG | 0.460273 | 2_1:+17111739 | Msa0198490:CDS |
| AAGATGTACGCCTAGGGGAT+TGG | 0.461198 | 2_1:+17113596 | Msa0198490:CDS |
| TATGTTACCAAGTATACAAC+AGG | 0.463776 | 2_1:-17113670 | None:intergenic |
| TTAGAAATCCATGACATAGC+TGG | 0.466153 | 2_1:+17111704 | Msa0198490:CDS |
| TTTCAATACACTCACAAAGA+TGG | 0.470261 | 2_1:+17111407 | Msa0198490:CDS |
| AGGTTATTACTGAAGAGTTA+CGG | 0.474516 | 2_1:+17111986 | Msa0198490:CDS |
| ACATTTGTTCTCCAGGGTCC+AGG | 0.476574 | 2_1:+17115175 | Msa0198490:intron |
| AATCCATGACATAGCTGGAT+TGG | 0.477150 | 2_1:+17111709 | Msa0198490:CDS |
| TTCTCCAGGGTCCAGGAACA+TGG | 0.481367 | 2_1:+17115182 | Msa0198490:intron |
| CGAGGTGCTCATGAGGGGCA+AGG | 0.481862 | 2_1:+17111734 | Msa0198490:CDS |
| TGGAAGTGAGTCAGCTGTAA+AGG | 0.482331 | 2_1:+17117778 | Msa0198490:CDS |
| CTTCCCAAAATAATAAAGAC+TGG | 0.484849 | 2_1:+17116377 | Msa0198490:CDS |
| CCAGTTGAACGACCCATCCT+TGG | 0.486370 | 2_1:+17110364 | Msa0198490:CDS |
| CGGCGGAGAGAGATTGAAAT+CGG | 0.487891 | 2_1:-17110303 | None:intergenic |
| GATGAAATTTGATGATCTAA+AGG | 0.491073 | 2_1:+17117751 | Msa0198490:CDS |
| CTTAGGTTAATTATTTCTAG+TGG | 0.494823 | 2_1:+17118264 | Msa0198490:three_prime_UTR |
| TTTGATGATCTAAAGGAACT+TGG | 0.496739 | 2_1:+17117758 | Msa0198490:CDS |
| ACAAAGGCTCCTCAAGCTGC+AGG | 0.508694 | 2_1:+17117091 | Msa0198490:CDS |
| CAGGTTGGTTTGCCAAATGT+TGG | 0.517974 | 2_1:+17111372 | Msa0198490:intron |
| AGAAGAGAAACGACCAAGGA+TGG | 0.519305 | 2_1:-17110377 | None:intergenic |
| TCCTAAATCCGCCAAATCGA+AGG | 0.520199 | 2_1:+17110336 | Msa0198490:CDS |
| TACTGAAGAGTTACGGCTGA+AGG | 0.521340 | 2_1:+17111993 | Msa0198490:CDS |
| GCTGGAAAATATAAACAAGA+AGG | 0.524187 | 2_1:+17118036 | Msa0198490:CDS |
| TTCAAGTTCAATGTTTCTGG+TGG | 0.536287 | 2_1:+17118096 | Msa0198490:CDS |
| CAAAAGGGGAAGTTCTCAGC+AGG | 0.538630 | 2_1:-17111435 | None:intergenic |
| TAACACGCAATACCTCAATA+GGG | 0.540267 | 2_1:-17118371 | None:intergenic |
| TTAGGCTCAATAGTGCAAAA+GGG | 0.543307 | 2_1:-17111450 | None:intergenic |
| ATCTGAAACTCACTCGTGTA+GGG | 0.545938 | 2_1:-17110248 | None:intergenic |
| GACATAGCTGGATTGGTTCG+AGG | 0.547428 | 2_1:+17111716 | Msa0198490:CDS |
| TTGGTTCGAGGTGCTCATGA+GGG | 0.547681 | 2_1:+17111728 | Msa0198490:CDS |
| ATAACCTCTAAATCCCTCAC+AGG | 0.552003 | 2_1:-17111970 | None:intergenic |
| GCTTCTTTCAGGTTAAGTGT+TGG | 0.554283 | 2_1:+17117053 | Msa0198490:intron |
| AGGGAAAAGATGTACGCCTA+GGG | 0.554324 | 2_1:+17113590 | Msa0198490:CDS |
| TTCGATTTGGCGGATTTAGG+AGG | 0.558249 | 2_1:-17110334 | None:intergenic |
| AATCTGAAACTCACTCGTGT+AGG | 0.559160 | 2_1:-17110249 | None:intergenic |
| CGGCAGCTTTCCAATCCCCT+AGG | 0.561018 | 2_1:-17113606 | None:intergenic |
| AGTTCAATGTTTCTGGTGGA+GGG | 0.562003 | 2_1:+17118100 | Msa0198490:CDS |
| AAGCAGACAACTGCCACTAA+AGG | 0.563415 | 2_1:-17118145 | None:intergenic |
| TTCAGATATGCCTCCTGATG+AGG | 0.565036 | 2_1:+17115250 | Msa0198490:CDS |
| GAAAGGATTTATTTGTGCTG+AGG | 0.566045 | 2_1:+17117135 | Msa0198490:CDS |
| ATTGGTTCGAGGTGCTCATG+AGG | 0.566137 | 2_1:+17111727 | Msa0198490:CDS |
| AAAACTTATGTGGTCCAAGA+TGG | 0.567578 | 2_1:+17118060 | Msa0198490:CDS |
| TGGATAGCCCCTGCAGCTTG+AGG | 0.571503 | 2_1:-17117100 | None:intergenic |
| GAGGGAAAAGATGTACGCCT+AGG | 0.572957 | 2_1:+17113589 | Msa0198490:CDS |
| CAAAGGCTCCTCAAGCTGCA+GGG | 0.574970 | 2_1:+17117092 | Msa0198490:CDS |
| TCAGGTCAAGGCATTCATTG+AGG | 0.575043 | 2_1:+17113567 | Msa0198490:intron |
| GAACCAATCCAGCTATGTCA+TGG | 0.579932 | 2_1:-17111712 | None:intergenic |
| TGGTGAGTTGATCCCTATTG+AGG | 0.581007 | 2_1:+17118359 | Msa0198490:three_prime_UTR |
| CTGGAAAATATAAACAAGAA+GGG | 0.582742 | 2_1:+17118037 | Msa0198490:CDS |
| GTGAGGCGAACAACGTTCAA+AGG | 0.582805 | 2_1:+17115285 | Msa0198490:CDS |
| TACCAAGTATACAACAGGCT+TGG | 0.583923 | 2_1:-17113665 | None:intergenic |
| AGGGTCCAGGAACATGGTGG+TGG | 0.584742 | 2_1:+17115188 | Msa0198490:intron |
| ATCTTGAAAAGAGCATGAAG+AGG | 0.584769 | 2_1:+17112496 | Msa0198490:CDS |
| TTCTCTAAGACACAGCTGAA+AGG | 0.586644 | 2_1:-17115221 | None:intergenic |
| GAGGTGCTCATGAGGGGCAA+GGG | 0.588995 | 2_1:+17111735 | Msa0198490:CDS |
| CTATTGAGCCTAATGAAGCA+AGG | 0.590462 | 2_1:+17111460 | Msa0198490:CDS |
| GTCAAGGCATTCATTGAGGA+GGG | 0.593032 | 2_1:+17113571 | Msa0198490:CDS |
| AGAATACGATTCCAATCTTG+AGG | 0.593260 | 2_1:-17110402 | None:intergenic |
| ACAAGAAGGGAAAACTTATG+TGG | 0.593833 | 2_1:+17118050 | Msa0198490:CDS |
| AAAGGCTCCTCAAGCTGCAG+GGG | 0.596118 | 2_1:+17117093 | Msa0198490:CDS |
| GCAAATTAGACGCCTAACAA+AGG | 0.601410 | 2_1:+17117075 | Msa0198490:CDS |
| GGTCAAGGCATTCATTGAGG+AGG | 0.601452 | 2_1:+17113570 | Msa0198490:intron |
| GAGTAAATTTGATGTGAACT+GGG | 0.606431 | 2_1:+17118422 | Msa0198490:three_prime_UTR |
| GCCACTCAAAACGCTCGTCA+GGG | 0.607437 | 2_1:-17111491 | None:intergenic |
| GAAGAGAAACGACCAAGGAT+GGG | 0.608124 | 2_1:-17110376 | None:intergenic |
| AGGGGATTGGAAAGCTGCCG+AGG | 0.611014 | 2_1:+17113609 | Msa0198490:CDS |
| TAGGCTCAATAGTGCAAAAG+GGG | 0.614822 | 2_1:-17111449 | None:intergenic |
| TTTCACAGCAGGACCTGATG+AGG | 0.615456 | 2_1:+17116427 | Msa0198490:CDS |
| TGGTTCGAGGTGCTCATGAG+GGG | 0.617191 | 2_1:+17111729 | Msa0198490:CDS |
| TATTTAGCCGCCTCATCAGG+AGG | 0.619128 | 2_1:-17115260 | None:intergenic |
| TTCTTCCCAAAATTCACACA+TGG | 0.624147 | 2_1:+17114829 | Msa0198490:CDS |
| GGAATTCAAAATCTCGACCT+CGG | 0.625649 | 2_1:-17113626 | None:intergenic |
| CTTGGCAGTAAGCAACTGGA+AGG | 0.630484 | 2_1:-17113647 | None:intergenic |
| TTTAGGAGGCATTGTTGCGG+CGG | 0.633154 | 2_1:-17110320 | None:intergenic |
| TATTGAGCCTAATGAAGCAA+GGG | 0.635871 | 2_1:+17111461 | Msa0198490:CDS |
| CGACACTGTTGACCCTGTGA+GGG | 0.636940 | 2_1:+17111957 | Msa0198490:CDS |
| AGATATGCCTCCTGATGAGG+CGG | 0.638742 | 2_1:+17115253 | Msa0198490:CDS |
| ACGACACTGTTGACCCTGTG+AGG | 0.640959 | 2_1:+17111956 | Msa0198490:CDS |
| GGATTTAGGAGGCATTGTTG+CGG | 0.651605 | 2_1:-17110323 | None:intergenic |
| TCCAGGGTCCAGGAACATGG+TGG | 0.661205 | 2_1:+17115185 | Msa0198490:intron |
| TTGCAAAGCACCTAGATCAG+TGG | 0.665194 | 2_1:-17117714 | None:intergenic |
| GGTCAACAGTGTCGTCTACG+TGG | 0.682008 | 2_1:-17111948 | None:intergenic |
| GGGAAAAGATGTACGCCTAG+GGG | 0.687762 | 2_1:+17113591 | Msa0198490:CDS |
| GGTGAGAAGAGAAACGACCA+AGG | 0.698806 | 2_1:-17110381 | None:intergenic |
| TAACCTCTAAATCCCTCACA+GGG | 0.708122 | 2_1:-17111969 | None:intergenic |
| TGAGGCGGCTAAATACTGTG+AGG | 0.765226 | 2_1:+17115268 | Msa0198490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr2_1:17112774-17112793 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr2_1:17112775-17112794 | None:intergenic | 10.0% |
| !! | AATACATTACTTTAATAAAA+TGG | + | chr2_1:17113259-17113278 | Msa0198490:intron | 10.0% |
| !! | ATACATTACTTTAATAAAAT+GGG | + | chr2_1:17113260-17113279 | Msa0198490:intron | 10.0% |
| !!! | ATTAAGTTGAAATTTTTTTA+AGG | - | chr2_1:17115459-17115478 | None:intergenic | 10.0% |
| !! | GATTAAAAAATAAAAAACAA+AGG | - | chr2_1:17116253-17116272 | None:intergenic | 10.0% |
| !! | TAAAAAATAAAAATAAATGC+TGG | - | chr2_1:17117289-17117308 | None:intergenic | 10.0% |
| !! | TTTAGTTATCTATTATTTGA+TGG | + | chr2_1:17111621-17111640 | Msa0198490:intron | 15.0% |
| !! | TTCAAAAAATAAATAATGGT+TGG | - | chr2_1:17112065-17112084 | None:intergenic | 15.0% |
| !! | CCTATTCAAAAAATAAATAA+TGG | - | chr2_1:17112069-17112088 | None:intergenic | 15.0% |
| !!! | CCATTATTTATTTTTTGAAT+AGG | + | chr2_1:17112066-17112085 | Msa0198490:intron | 15.0% |
| !! | AACAATTAACATACTAATAT+TGG | - | chr2_1:17112092-17112111 | None:intergenic | 15.0% |
| !!! | AAACATCAATTTTTTTTGAT+TGG | + | chr2_1:17112159-17112178 | Msa0198490:intron | 15.0% |
| !! | TTAAAGAAAAACAAAATCAA+TGG | - | chr2_1:17112252-17112271 | None:intergenic | 15.0% |
| !! | AAAAGAAATTACAATGAATT+TGG | - | chr2_1:17112327-17112346 | None:intergenic | 15.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | + | chr2_1:17112622-17112641 | Msa0198490:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr2_1:17112660-17112679 | Msa0198490:intron | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr2_1:17113060-17113079 | Msa0198490:intron | 15.0% |
| !! | ATATAAAATAACAAGACAAA+AGG | - | chr2_1:17113137-17113156 | None:intergenic | 15.0% |
| !!! | TTGTCTTACTTTTTTTTTTT+GGG | + | chr2_1:17113192-17113211 | Msa0198490:intron | 15.0% |
| !! | TTTATTAAAGTAATGTATTG+TGG | - | chr2_1:17113258-17113277 | None:intergenic | 15.0% |
| !!! | TAAATATAAGATGAACATTT+TGG | + | chr2_1:17113526-17113545 | Msa0198490:intron | 15.0% |
| !! | TATTAATCATAAACCATATT+TGG | - | chr2_1:17114261-17114280 | None:intergenic | 15.0% |
| !! | TTATGATTAATAGAACATTA+TGG | + | chr2_1:17114269-17114288 | Msa0198490:intron | 15.0% |
| !! | CAAATATTTAGAGAATAATA+AGG | - | chr2_1:17115105-17115124 | None:intergenic | 15.0% |
| !! | ATTATTCTCTAAATATTTGT+TGG | + | chr2_1:17115106-17115125 | Msa0198490:intron | 15.0% |
| !! | TACTTATACATCAAATATTA+AGG | + | chr2_1:17115392-17115411 | Msa0198490:intron | 15.0% |
| !!! | ATTCATATTTTATAGATATC+CGG | + | chr2_1:17115492-17115511 | Msa0198490:intron | 15.0% |
| !! | AACAAGTATTTATTTATTTC+TGG | + | chr2_1:17115814-17115833 | Msa0198490:intron | 15.0% |
| !! | AATCTTAATTGTGATAAAAA+GGG | - | chr2_1:17116197-17116216 | None:intergenic | 15.0% |
| !! | TAATCTTAATTGTGATAAAA+AGG | - | chr2_1:17116198-17116217 | None:intergenic | 15.0% |
| !!! | CCAAATCTTTAAAATTAATA+TGG | - | chr2_1:17116305-17116324 | None:intergenic | 15.0% |
| !!! | CCATATTAATTTTAAAGATT+TGG | + | chr2_1:17116302-17116321 | Msa0198490:intron | 15.0% |
| !! | AGAAACTAATAATTATAGTT+TGG | - | chr2_1:17116536-17116555 | None:intergenic | 15.0% |
| !! | TTGTTGTATTGTTTATTATT+AGG | + | chr2_1:17118011-17118030 | Msa0198490:intron | 15.0% |
| !!! | TAACTTAAACACATTTTAAT+CGG | - | chr2_1:17118308-17118327 | None:intergenic | 15.0% |
| !! | AATTTCTCAAAAGAAATTAT+AGG | + | chr2_1:17118471-17118490 | Msa0198490:three_prime_UTR | 15.0% |
| !! | CCATTATTGTAATTGAAAAA+GGG | - | chr2_1:17110480-17110499 | None:intergenic | 20.0% |
| !!! | CCTTTTTCAATTACAATAAT+GGG | + | chr2_1:17110478-17110497 | Msa0198490:intron | 20.0% |
| !! | TATAAAGAATCAATTAAGCA+TGG | - | chr2_1:17110526-17110545 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTGAGAATGATT+TGG | + | chr2_1:17110621-17110640 | Msa0198490:intron | 20.0% |
| !!! | TTTAACTGTATTGTATCTTT+TGG | + | chr2_1:17111221-17111240 | Msa0198490:intron | 20.0% |
| !! | TCATTTAAGTGCTTATATAT+AGG | - | chr2_1:17111258-17111277 | None:intergenic | 20.0% |
| !!! | TTATGTTGTTTAATCAAACA+TGG | + | chr2_1:17111304-17111323 | Msa0198490:intron | 20.0% |
| !!! | TGATATTGTCATATTGATTT+CGG | + | chr2_1:17111867-17111886 | Msa0198490:intron | 20.0% |
| !!! | CCAATTTTATGATAAAGAAA+AGG | - | chr2_1:17112034-17112053 | None:intergenic | 20.0% |
| !!! | CCTTTTCTTTATCATAAAAT+TGG | + | chr2_1:17112031-17112050 | Msa0198490:intron | 20.0% |
| !!! | TTTATCATAAAATTGGCTTT+TGG | + | chr2_1:17112038-17112057 | Msa0198490:intron | 20.0% |
| !!! | TTATCATAAAATTGGCTTTT+GGG | + | chr2_1:17112039-17112058 | Msa0198490:intron | 20.0% |
| !! | AGTATGTTAATTGTTATGTT+AGG | + | chr2_1:17112097-17112116 | Msa0198490:intron | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr2_1:17113087-17113106 | None:intergenic | 20.0% |
| !!! | GTTGTCTTACTTTTTTTTTT+TGG | + | chr2_1:17113191-17113210 | Msa0198490:intron | 20.0% |
| !!! | TTTTTTTTTGGGTGTTTTAT+TGG | + | chr2_1:17113203-17113222 | Msa0198490:intron | 20.0% |
| !! | AATTTGATATTTCTCAAAGT+TGG | + | chr2_1:17113898-17113917 | Msa0198490:intron | 20.0% |
| !! | CTATAAAAGAAATTACAATG+TGG | - | chr2_1:17113975-17113994 | None:intergenic | 20.0% |
| !!! | CACATTGTAATTTCTTTTAT+AGG | + | chr2_1:17113973-17113992 | Msa0198490:intron | 20.0% |
| !!! | TTTGATTATTTTCTATCCAA+AGG | + | chr2_1:17114376-17114395 | Msa0198490:intron | 20.0% |
| !! | ATAAAGTACATGAAACAATA+TGG | - | chr2_1:17114712-17114731 | None:intergenic | 20.0% |
| !! | TAAAATGCAAGTATTAAAGA+TGG | - | chr2_1:17114759-17114778 | None:intergenic | 20.0% |
| !!! | TAAATATTTTCTTCTTCTAG+TGG | - | chr2_1:17114997-17115016 | None:intergenic | 20.0% |
| !! | TCATACATTTAATAGAAGTA+AGG | - | chr2_1:17115328-17115347 | None:intergenic | 20.0% |
| !! | CTATAAAATATGAATCTATG+TGG | - | chr2_1:17115487-17115506 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAAGCAAAGAAAC+TGG | - | chr2_1:17115629-17115648 | None:intergenic | 20.0% |
| !! | CACAGAAAATAATGAATATT+AGG | - | chr2_1:17116099-17116118 | None:intergenic | 20.0% |
| !!! | AATCCAGTCTTTATTATTTT+GGG | - | chr2_1:17116383-17116402 | None:intergenic | 20.0% |
| !! | TAAATAGTTATGAATGTTCA+CGG | + | chr2_1:17116491-17116510 | Msa0198490:intron | 20.0% |
| !!! | GATTTATAATTTGAAATGCA+CGG | + | chr2_1:17116578-17116597 | Msa0198490:intron | 20.0% |
| !!! | TATTTTTTACAAACAAGAAC+AGG | + | chr2_1:17117300-17117319 | Msa0198490:intron | 20.0% |
| !!! | ATTCTAAGATTGAATACTAA+AGG | + | chr2_1:17117332-17117351 | Msa0198490:intron | 20.0% |
| !!! | TAAGATTGTTTCTTATTCTA+TGG | + | chr2_1:17117474-17117493 | Msa0198490:intron | 20.0% |
| !!! | CAGTTATATCTAAACATTTT+AGG | - | chr2_1:17117853-17117872 | None:intergenic | 20.0% |
| !! | ATGTTTAGATATAACTGTAA+TGG | + | chr2_1:17117856-17117875 | Msa0198490:intron | 20.0% |
| !!! | TGTTTATGTTGTTAGTTTAT+AGG | + | chr2_1:17117957-17117976 | Msa0198490:intron | 20.0% |
| !!! | TTAGTTTATAGGTTCTTTTA+GGG | + | chr2_1:17117968-17117987 | Msa0198490:intron | 20.0% |
| !! | TTATATAATGCTCAAAAACA+TGG | - | chr2_1:17118201-17118220 | None:intergenic | 20.0% |
| !!! | AGTTTTGAATACATAAATGT+TGG | + | chr2_1:17118339-17118358 | Msa0198490:three_prime_UTR | 20.0% |
| !!! | TTTCTTTTGAGAAATTCAAT+TGG | - | chr2_1:17118467-17118486 | None:intergenic | 20.0% |
| !!! | CCCTTTTTCAATTACAATAA+TGG | + | chr2_1:17110477-17110496 | Msa0198490:intron | 25.0% |
| ! | CCCATTATTGTAATTGAAAA+AGG | - | chr2_1:17110481-17110500 | None:intergenic | 25.0% |
| ! | ATAAATAAACAGCAACTCAA+TGG | - | chr2_1:17110571-17110590 | None:intergenic | 25.0% |
| ! | TTGTTTGTTTGTTTCAATAG+CGG | + | chr2_1:17110712-17110731 | Msa0198490:intron | 25.0% |
| ! | AATTGTCTGAAAACGATTAT+TGG | + | chr2_1:17110760-17110779 | Msa0198490:intron | 25.0% |
| ! | TTAATAACCCAAATAGAAAC+AGG | - | chr2_1:17110786-17110805 | None:intergenic | 25.0% |
| !! | GGTTATTAAAGTTGATCAAA+GGG | + | chr2_1:17110797-17110816 | Msa0198490:intron | 25.0% |
| !!! | CTTATTTTCATAATCTCTCA+AGG | + | chr2_1:17111179-17111198 | Msa0198490:intron | 25.0% |
| ! | TTATTATTACTCTGTTGTTC+AGG | + | chr2_1:17111353-17111372 | Msa0198490:intron | 25.0% |
| ! | AGATAACTAAAAGTTAGTGA+CGG | - | chr2_1:17111612-17111631 | None:intergenic | 25.0% |
| !!! | ATAGTTTTTTATCTCACATC+CGG | + | chr2_1:17111765-17111784 | Msa0198490:CDS | 25.0% |
| ! | GTTTGATCAAACAACAATAA+CGG | - | chr2_1:17112143-17112162 | None:intergenic | 25.0% |
| !! | TAAAGTACATGGTCTTTTAA+GGG | + | chr2_1:17112185-17112204 | Msa0198490:intron | 25.0% |
| !! | TACAATGAATTTGGAGTAAA+GGG | - | chr2_1:17112318-17112337 | None:intergenic | 25.0% |
| !! | TTACAATGAATTTGGAGTAA+AGG | - | chr2_1:17112319-17112338 | None:intergenic | 25.0% |
| ! | AACAAGAAGTTCAATTGAAA+AGG | - | chr2_1:17112399-17112418 | None:intergenic | 25.0% |
| !!! | AACTAATTTGCCTTTTTGTT+TGG | + | chr2_1:17112967-17112986 | Msa0198490:intron | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr2_1:17113082-17113101 | None:intergenic | 25.0% |
| !!! | ATAGAGTTTTAACTGTACTA+TGG | + | chr2_1:17113101-17113120 | Msa0198490:intron | 25.0% |
| ! | TAAAATAACAAGACAAAAGG+TGG | - | chr2_1:17113134-17113153 | None:intergenic | 25.0% |
| ! | TGCAACAATATTCTCAAATT+TGG | + | chr2_1:17113293-17113312 | Msa0198490:intron | 25.0% |
| ! | GCAACAATATTCTCAAATTT+GGG | + | chr2_1:17113294-17113313 | Msa0198490:intron | 25.0% |
| ! | TATACACTCAAAAAAAGTTG+TGG | + | chr2_1:17113502-17113521 | Msa0198490:intron | 25.0% |
| ! | ATACACTCAAAAAAAGTTGT+GGG | + | chr2_1:17113503-17113522 | Msa0198490:intron | 25.0% |
| !! | ATATAAGATGAACATTTTGG+TGG | + | chr2_1:17113529-17113548 | Msa0198490:intron | 25.0% |
| !!! | TTTGACTTTTTGTATGTCTT+TGG | + | chr2_1:17113713-17113732 | Msa0198490:intron | 25.0% |
| ! | TTAACAGTGCTACATAATTT+GGG | + | chr2_1:17113810-17113829 | Msa0198490:intron | 25.0% |
| ! | TCCTAAGTATAATAATCGTT+TGG | + | chr2_1:17114000-17114019 | Msa0198490:intron | 25.0% |
| ! | ACCAAACGATTATTATACTT+AGG | - | chr2_1:17114004-17114023 | None:intergenic | 25.0% |
| !! | TAGAAAATATGGTGGAAAAT+AGG | + | chr2_1:17114081-17114100 | Msa0198490:intron | 25.0% |
| !! | GTTTCACTTATAGTTTTTCT+AGG | - | chr2_1:17114205-17114224 | None:intergenic | 25.0% |
| ! | AAACTATAAGTGAAACCATT+AGG | + | chr2_1:17114209-17114228 | Msa0198490:intron | 25.0% |
| !!! | GAAAATTCTAGAACATGAAA+TGG | - | chr2_1:17114597-17114616 | None:intergenic | 25.0% |
| ! | TAAGGAAAAACAGAAAAACT+AGG | - | chr2_1:17115087-17115106 | None:intergenic | 25.0% |
| ! | GAATAGTAGTTGCATATTAA+TGG | - | chr2_1:17115708-17115727 | None:intergenic | 25.0% |
| !! | CAGTATAGTATGATACATTT+TGG | - | chr2_1:17115741-17115760 | None:intergenic | 25.0% |
| ! | TAATATATGACATGTGAAAG+CGG | - | chr2_1:17116001-17116020 | None:intergenic | 25.0% |
| ! | AATAAAAAACAAAGGCAAAC+AGG | - | chr2_1:17116245-17116264 | None:intergenic | 25.0% |
| !! | GAATCCAGTCTTTATTATTT+TGG | - | chr2_1:17116384-17116403 | None:intergenic | 25.0% |
| ! | CTAATAATTATAGTTTGGCA+AGG | - | chr2_1:17116531-17116550 | None:intergenic | 25.0% |
| ! | ATTGAATGAAAAGAAACTGA+AGG | + | chr2_1:17116825-17116844 | Msa0198490:intron | 25.0% |
| ! | TTGAATGAAAAGAAACTGAA+GGG | + | chr2_1:17116826-17116845 | Msa0198490:intron | 25.0% |
| !! | TTTGCTTGAATTCTTTTGTT+TGG | + | chr2_1:17116966-17116985 | Msa0198490:intron | 25.0% |
| ! | CACAAAAGTTACTAAATGAA+AGG | - | chr2_1:17117023-17117042 | None:intergenic | 25.0% |
| !! | CTTTCATTTAGTAACTTTTG+TGG | + | chr2_1:17117021-17117040 | Msa0198490:intron | 25.0% |
| !! | TGAGGTAAGTTCATTAATTT+TGG | + | chr2_1:17117153-17117172 | Msa0198490:intron | 25.0% |
| ! | GTTAAATAGGAGAGATAATA+TGG | - | chr2_1:17117194-17117213 | None:intergenic | 25.0% |
| ! | GCTACGTAAATAAGTTAAAT+AGG | - | chr2_1:17117207-17117226 | None:intergenic | 25.0% |
| ! | GAAAATAGAATAAGAACTGT+TGG | - | chr2_1:17117540-17117559 | None:intergenic | 25.0% |
| !! | CAGTTCTTATTCTATTTTCT+TGG | + | chr2_1:17117541-17117560 | Msa0198490:intron | 25.0% |
| !! | TTCTTATTCTATTTTCTTGG+CGG | + | chr2_1:17117544-17117563 | Msa0198490:intron | 25.0% |
| !! | TGAACACATATTTTCATAAG+GGG | - | chr2_1:17117589-17117608 | None:intergenic | 25.0% |
| !! | GTGAACACATATTTTCATAA+GGG | - | chr2_1:17117590-17117609 | None:intergenic | 25.0% |
| !! | AGTGAACACATATTTTCATA+AGG | - | chr2_1:17117591-17117610 | None:intergenic | 25.0% |
| ! | TTATGAAAATATGTGTTCAC+TGG | + | chr2_1:17117590-17117609 | Msa0198490:intron | 25.0% |
| !! | GATGAAATTTGATGATCTAA+AGG | + | chr2_1:17117751-17117770 | Msa0198490:CDS | 25.0% |
| !!! | GTTAGTTTATAGGTTCTTTT+AGG | + | chr2_1:17117967-17117986 | Msa0198490:intron | 25.0% |
| ! | CTGGAAAATATAAACAAGAA+GGG | + | chr2_1:17118037-17118056 | Msa0198490:CDS | 25.0% |
| ! | AAAATATAATGTCACCATCT+TGG | - | chr2_1:17118077-17118096 | None:intergenic | 25.0% |
| !!! | TTTTTCAAGTTCAATGTTTC+TGG | + | chr2_1:17118093-17118112 | Msa0198490:CDS | 25.0% |
| !!! | GAAGTTGAAAGTGTAATTTT+TGG | + | chr2_1:17118221-17118240 | Msa0198490:three_prime_UTR | 25.0% |
| !! | TTTTCATGAACTATGTACTT+AGG | + | chr2_1:17118247-17118266 | Msa0198490:three_prime_UTR | 25.0% |
| !!! | CTTAGGTTAATTATTTCTAG+TGG | + | chr2_1:17118264-17118283 | Msa0198490:three_prime_UTR | 25.0% |
| !!! | AAACACATTTTAATCGGAAA+TGG | - | chr2_1:17118302-17118321 | None:intergenic | 25.0% |
| ! | CATGGAATGAAGTTGATTAA+TGG | - | chr2_1:17110508-17110527 | None:intergenic | 30.0% |
| !! | ATTATTGGCCTGTTTCTATT+TGG | + | chr2_1:17110775-17110794 | Msa0198490:intron | 30.0% |
| !! | TTATTGGCCTGTTTCTATTT+GGG | + | chr2_1:17110776-17110795 | Msa0198490:intron | 30.0% |
| ! | GGGTTATTAAAGTTGATCAA+AGG | + | chr2_1:17110796-17110815 | Msa0198490:intron | 30.0% |
| TTTAGCTGTTTATCCAAACA+AGG | + | chr2_1:17111016-17111035 | Msa0198490:intron | 30.0% | |
| TAAATAAGCCATATCCAAAC+AGG | - | chr2_1:17111057-17111076 | None:intergenic | 30.0% | |
| TTTCAATACACTCACAAAGA+TGG | + | chr2_1:17111407-17111426 | Msa0198490:CDS | 30.0% | |
| TTTGTTGGATCTGTAAATAC+AGG | + | chr2_1:17111670-17111689 | Msa0198490:intron | 30.0% | |
| !!! | TAGTTTTTTATCTCACATCC+GGG | + | chr2_1:17111766-17111785 | Msa0198490:CDS | 30.0% |
| ATAACATCATGATGCAAAAG+TGG | - | chr2_1:17111848-17111867 | None:intergenic | 30.0% | |
| ! | AACCTATAGTCATTGTTGTT+TGG | + | chr2_1:17111897-17111916 | Msa0198490:intron | 30.0% |
| TACCAAACAACAATGACTAT+AGG | - | chr2_1:17111902-17111921 | None:intergenic | 30.0% | |
| !! | TATAGTCATTGTTGTTTGGT+AGG | + | chr2_1:17111901-17111920 | Msa0198490:intron | 30.0% |
| AGGTTATTACTGAAGAGTTA+CGG | + | chr2_1:17111986-17112005 | Msa0198490:CDS | 30.0% | |
| ! | TTGATTGGTTGTAAAGTACA+TGG | + | chr2_1:17112174-17112193 | Msa0198490:intron | 30.0% |
| ! | GTAAAGTACATGGTCTTTTA+AGG | + | chr2_1:17112184-17112203 | Msa0198490:intron | 30.0% |
| ! | AAAGTACATGGTCTTTTAAG+GGG | + | chr2_1:17112186-17112205 | Msa0198490:intron | 30.0% |
| TTTCTTAACAAACATGTGGA+AGG | + | chr2_1:17112211-17112230 | Msa0198490:intron | 30.0% | |
| !!! | TTTTTTACATTGACCCAAGT+CGG | - | chr2_1:17112688-17112707 | None:intergenic | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr2_1:17112747-17112766 | Msa0198490:intron | 30.0% |
| TTGGGACCGAAAATTATAAA+GGG | - | chr2_1:17112756-17112775 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | - | chr2_1:17112849-17112868 | None:intergenic | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr2_1:17112980-17112999 | None:intergenic | 30.0% | |
| TAATATAAGTCATCCAGTGA+CGG | - | chr2_1:17113352-17113371 | None:intergenic | 30.0% | |
| ! | TATTAGCTCTTAAAGAAGCA+TGG | + | chr2_1:17113367-17113386 | Msa0198490:intron | 30.0% |
| TAAACACATGAGAAGAGAAA+AGG | - | chr2_1:17113471-17113490 | None:intergenic | 30.0% | |
| !!! | TGGCAATTTTTTACATCTTC+AGG | + | chr2_1:17113549-17113568 | Msa0198490:intron | 30.0% |
| !!! | TTTTTTACATCTTCAGGTCA+AGG | + | chr2_1:17113555-17113574 | Msa0198490:intron | 30.0% |
| TATGTTACCAAGTATACAAC+AGG | - | chr2_1:17113673-17113692 | None:intergenic | 30.0% | |
| TACGAAATGACATAGATTAC+AGG | - | chr2_1:17113750-17113769 | None:intergenic | 30.0% | |
| CTTAACAGTGCTACATAATT+TGG | + | chr2_1:17113809-17113828 | Msa0198490:intron | 30.0% | |
| ! | TAATTTGGGATATGTCTTGA+TGG | + | chr2_1:17113824-17113843 | Msa0198490:intron | 30.0% |
| ! | GTGTCTGTTTTCTATATGTT+TGG | + | chr2_1:17113860-17113879 | Msa0198490:intron | 30.0% |
| AGCACCTATAGTAGAAAATA+TGG | + | chr2_1:17114070-17114089 | Msa0198490:intron | 30.0% | |
| ACCTATAGTAGAAAATATGG+TGG | + | chr2_1:17114073-17114092 | Msa0198490:intron | 30.0% | |
| ! | TCCACCATATTTTCTACTAT+AGG | - | chr2_1:17114077-17114096 | None:intergenic | 30.0% |
| TAATCTCTAATCGTTCCTAA+TGG | - | chr2_1:17114227-17114246 | None:intergenic | 30.0% | |
| ACGATTAGAGATTAATGAGT+TGG | + | chr2_1:17114233-17114252 | Msa0198490:intron | 30.0% | |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | chr2_1:17114245-17114264 | Msa0198490:intron | 30.0% |
| ! | ATGGAAGTATGTATGAAATG+TGG | - | chr2_1:17114510-17114529 | None:intergenic | 30.0% |
| CACAAATACATAGAGTGATA+AGG | - | chr2_1:17114628-17114647 | None:intergenic | 30.0% | |
| TTCACACTAAACATATGTGA+CGG | - | chr2_1:17114652-17114671 | None:intergenic | 30.0% | |
| ! | GAAACTTGTTCTTCTTTCTT+TGG | - | chr2_1:17114812-17114831 | None:intergenic | 30.0% |
| ATCTAACAAGGAACCTAAAT+TGG | + | chr2_1:17115537-17115556 | Msa0198490:intron | 30.0% | |
| TCTAACAAGGAACCTAAATT+GGG | + | chr2_1:17115538-17115557 | Msa0198490:intron | 30.0% | |
| AGTTGCATATTAATGGTAAC+TGG | - | chr2_1:17115701-17115720 | None:intergenic | 30.0% | |
| AATATTGCTTCACAGTTCAA+TGG | - | chr2_1:17115867-17115886 | None:intergenic | 30.0% | |
| ! | TATTTTCATCGCTGAATGAT+TGG | + | chr2_1:17115883-17115902 | Msa0198490:intron | 30.0% |
| ! | TGGTTCAGTTTAAAATACAC+CGG | + | chr2_1:17115903-17115922 | Msa0198490:intron | 30.0% |
| GCTAGAACTTCTTATGAAAA+AGG | - | chr2_1:17116277-17116296 | None:intergenic | 30.0% | |
| CTTCCCAAAATAATAAAGAC+TGG | + | chr2_1:17116377-17116396 | Msa0198490:CDS | 30.0% | |
| ! | TTATTAGTTTCTCCCATAGT+TGG | + | chr2_1:17116544-17116563 | Msa0198490:intron | 30.0% |
| ! | GTGTGATTTGTATCATTGAT+AGG | + | chr2_1:17116715-17116734 | Msa0198490:intron | 30.0% |
| !!! | ATCCATACTGATTTTGAGAA+AGG | + | chr2_1:17117118-17117137 | Msa0198490:CDS | 30.0% |
| ATCCTTTCTCAAAATCAGTA+TGG | - | chr2_1:17117123-17117142 | None:intergenic | 30.0% | |
| CATTTCTAAATTTGTCGTGA+AGG | - | chr2_1:17117366-17117385 | None:intergenic | 30.0% | |
| TCAATTAGATTCTTATCCGA+CGG | - | chr2_1:17117441-17117460 | None:intergenic | 30.0% | |
| ! | ACATATTTTCATAAGGGGAA+TGG | - | chr2_1:17117584-17117603 | None:intergenic | 30.0% |
| TATATATACACCACTGATCT+AGG | + | chr2_1:17117704-17117723 | Msa0198490:CDS | 30.0% | |
| ! | TTTGATGATCTAAAGGAACT+TGG | + | chr2_1:17117758-17117777 | Msa0198490:CDS | 30.0% |
| ! | AAAATTTGAGACAACACTTC+AGG | + | chr2_1:17117883-17117902 | Msa0198490:intron | 30.0% |
| ATACAACAAAGAGTGAGATA+TGG | - | chr2_1:17118000-17118019 | None:intergenic | 30.0% | |
| ATTGTTTATTATTAGGCTGC+TGG | + | chr2_1:17118018-17118037 | Msa0198490:intron | 30.0% | |
| GCTGGAAAATATAAACAAGA+AGG | + | chr2_1:17118036-17118055 | Msa0198490:CDS | 30.0% | |
| ATAATGCTCAAAAACATGGT+AGG | - | chr2_1:17118197-17118216 | None:intergenic | 30.0% | |
| AGAGTAAATTTGATGTGAAC+TGG | + | chr2_1:17118421-17118440 | Msa0198490:three_prime_UTR | 30.0% | |
| GAGTAAATTTGATGTGAACT+GGG | + | chr2_1:17118422-17118441 | Msa0198490:three_prime_UTR | 30.0% | |
| AGAATACGATTCCAATCTTG+AGG | - | chr2_1:17110405-17110424 | None:intergenic | 35.0% | |
| ! | AAGCTATCTTTGAGAGCTTA+TGG | - | chr2_1:17110900-17110919 | None:intergenic | 35.0% |
| !! | TATAAACCAAAGGCCTTGTT+TGG | - | chr2_1:17111032-17111051 | None:intergenic | 35.0% |
| ! | AAACAAGGCCTTTGGTTTAT+AGG | + | chr2_1:17111031-17111050 | Msa0198490:intron | 35.0% |
| TTTATAGGCCTGTTTGGATA+TGG | + | chr2_1:17111046-17111065 | Msa0198490:intron | 35.0% | |
| TATTACTCTGTTGTTCAGGT+TGG | + | chr2_1:17111357-17111376 | Msa0198490:intron | 35.0% | |
| AGTGTAGACTTTCCAACATT+TGG | - | chr2_1:17111387-17111406 | None:intergenic | 35.0% | |
| TTAGGCTCAATAGTGCAAAA+GGG | - | chr2_1:17111453-17111472 | None:intergenic | 35.0% | |
| ATTAGGCTCAATAGTGCAAA+AGG | - | chr2_1:17111454-17111473 | None:intergenic | 35.0% | |
| TATTGAGCCTAATGAAGCAA+GGG | + | chr2_1:17111461-17111480 | Msa0198490:CDS | 35.0% | |
| !! | AGATTACAAACCTCGCTTTT+TGG | - | chr2_1:17111534-17111553 | None:intergenic | 35.0% |
| AAAAAGCGAGGTTTGTAATC+TGG | + | chr2_1:17111533-17111552 | Msa0198490:intron | 35.0% | |
| ATATATCCTGACGTGTTTGT+TGG | + | chr2_1:17111655-17111674 | Msa0198490:intron | 35.0% | |
| TTAGAAATCCATGACATAGC+TGG | + | chr2_1:17111704-17111723 | Msa0198490:CDS | 35.0% | |
| GATCAAACAACAATAACGGT+TGG | - | chr2_1:17112139-17112158 | None:intergenic | 35.0% | |
| !! | AAGTACATGGTCTTTTAAGG+GGG | + | chr2_1:17112187-17112206 | Msa0198490:intron | 35.0% |
| !!! | CTATGTGTGTTTTAACGCTA+AGG | + | chr2_1:17112287-17112306 | Msa0198490:intron | 35.0% |
| ATCCTATGATGTTACGCAAA+GGG | - | chr2_1:17112448-17112467 | None:intergenic | 35.0% | |
| TATCCTATGATGTTACGCAA+AGG | - | chr2_1:17112449-17112468 | None:intergenic | 35.0% | |
| ! | ATCTTGAAAAGAGCATGAAG+AGG | + | chr2_1:17112496-17112515 | Msa0198490:CDS | 35.0% |
| ! | TTTTTACATTGACCCAAGTC+GGG | - | chr2_1:17112687-17112706 | None:intergenic | 35.0% |
| CTTGGGACCGAAAATTATAA+AGG | - | chr2_1:17112757-17112776 | None:intergenic | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | - | chr2_1:17112893-17112912 | None:intergenic | 35.0% | |
| TTTAACTGTACTATGGCCAT+TGG | + | chr2_1:17113108-17113127 | Msa0198490:intron | 35.0% | |
| TTTCTTCGTATGATTCTCTC+TGG | + | chr2_1:17113229-17113248 | Msa0198490:intron | 35.0% | |
| ATGCATTGCATTCTCTCATA+AGG | + | chr2_1:17113418-17113437 | Msa0198490:intron | 35.0% | |
| TGATATTTCTCAAAGTTGGC+TGG | + | chr2_1:17113902-17113921 | Msa0198490:intron | 35.0% | |
| ! | ATATGGTGGAAAATAGGCTT+AGG | + | chr2_1:17114087-17114106 | Msa0198490:intron | 35.0% |
| AAAATAGGCTTAGGTGGTTT+GGG | + | chr2_1:17114096-17114115 | Msa0198490:intron | 35.0% | |
| ! | AGTTTTTCTAGGTTTTCCTC+TGG | - | chr2_1:17114194-17114213 | None:intergenic | 35.0% |
| ! | GAAAAAGGTATGCGAATGAA+TGG | - | chr2_1:17114478-17114497 | None:intergenic | 35.0% |
| CTAGAACATGAAATGGCAAT+TGG | - | chr2_1:17114590-17114609 | None:intergenic | 35.0% | |
| TTCTTCCCAAAATTCACACA+TGG | + | chr2_1:17114829-17114848 | Msa0198490:CDS | 35.0% | |
| ! | ACGTACCATGTGTGAATTTT+GGG | - | chr2_1:17114837-17114856 | None:intergenic | 35.0% |
| ! | TACGTACCATGTGTGAATTT+TGG | - | chr2_1:17114838-17114857 | None:intergenic | 35.0% |
| !!! | TCCGTGTCATTTTTTTCTTC+TGG | + | chr2_1:17114873-17114892 | Msa0198490:intron | 35.0% |
| CCCAGAAGAAAAAAATGACA+CGG | - | chr2_1:17114877-17114896 | None:intergenic | 35.0% | |
| !!! | CCGTGTCATTTTTTTCTTCT+GGG | + | chr2_1:17114874-17114893 | Msa0198490:intron | 35.0% |
| TGGAGAACAAATGTGACTAA+TGG | - | chr2_1:17115169-17115188 | None:intergenic | 35.0% | |
| ATTAGTCACATTTGTTCTCC+AGG | + | chr2_1:17115168-17115187 | Msa0198490:intron | 35.0% | |
| TTAGTCACATTTGTTCTCCA+GGG | + | chr2_1:17115169-17115188 | Msa0198490:intron | 35.0% | |
| TGAGAATAACAGAGTTTCAC+TGG | - | chr2_1:17115599-17115618 | None:intergenic | 35.0% | |
| ATCGTATGAATCAGACACAT+TGG | + | chr2_1:17115661-17115680 | Msa0198490:intron | 35.0% | |
| !! | ATTTATTTCTGGTTCGACCA+TGG | + | chr2_1:17115825-17115844 | Msa0198490:intron | 35.0% |
| ! | GGTTCAGTTTAAAATACACC+GGG | + | chr2_1:17115904-17115923 | Msa0198490:intron | 35.0% |
| ! | ATCCCAAATTCATTTTCCCT+TGG | + | chr2_1:17116020-17116039 | Msa0198490:intron | 35.0% |
| GACCAAGGGAAAATGAATTT+GGG | - | chr2_1:17116025-17116044 | None:intergenic | 35.0% | |
| CTTTCAAATTTGGATGGCAA+TGG | - | chr2_1:17116049-17116068 | None:intergenic | 35.0% | |
| !!! | CTCATTTACTTTTTCACAGC+AGG | + | chr2_1:17116416-17116435 | Msa0198490:CDS | 35.0% |
| ATGTGGATATTTACCTCATC+AGG | - | chr2_1:17116443-17116462 | None:intergenic | 35.0% | |
| AAGACAACTAACAGTGTGAA+AGG | - | chr2_1:17116470-17116489 | None:intergenic | 35.0% | |
| ! | CGTAAGATTTTGCCAACTAT+GGG | - | chr2_1:17116559-17116578 | None:intergenic | 35.0% |
| ! | TCGTAAGATTTTGCCAACTA+TGG | - | chr2_1:17116560-17116579 | None:intergenic | 35.0% |
| ! | ACGGTTCTATACTTGGTAAT+GGG | + | chr2_1:17116597-17116616 | Msa0198490:intron | 35.0% |
| TGTGCTTCTTGTCACATATA+TGG | + | chr2_1:17116780-17116799 | Msa0198490:intron | 35.0% | |
| AACACATCAGAACAAAGGAA+GGG | - | chr2_1:17116893-17116912 | None:intergenic | 35.0% | |
| AAAGGAACACATCAGAACAA+AGG | - | chr2_1:17116898-17116917 | None:intergenic | 35.0% | |
| !!! | GTTTGGTTTTTCCATGTCTA+AGG | + | chr2_1:17116983-17117002 | Msa0198490:intron | 35.0% |
| GGCTATTATTTGCTTCTTTC+AGG | + | chr2_1:17117042-17117061 | Msa0198490:intron | 35.0% | |
| GAAAGGATTTATTTGTGCTG+AGG | + | chr2_1:17117135-17117154 | Msa0198490:CDS | 35.0% | |
| CTAAATTTGTCGTGAAGGAA+AGG | - | chr2_1:17117361-17117380 | None:intergenic | 35.0% | |
| GACGGTAATTCATATTGCAA+GGG | - | chr2_1:17117423-17117442 | None:intergenic | 35.0% | |
| CTTGCAATATGAATTACCGT+CGG | + | chr2_1:17117422-17117441 | Msa0198490:intron | 35.0% | |
| ACAATCACTGTTACTCATTG+TGG | + | chr2_1:17117498-17117517 | Msa0198490:intron | 35.0% | |
| CTGACTTCTTAGCTTAATTG+TGG | + | chr2_1:17117907-17117926 | Msa0198490:intron | 35.0% | |
| ACAAAGAGTGAGATATGGTT+AGG | - | chr2_1:17117995-17118014 | None:intergenic | 35.0% | |
| ACAAGAAGGGAAAACTTATG+TGG | + | chr2_1:17118050-17118069 | Msa0198490:CDS | 35.0% | |
| AAAACTTATGTGGTCCAAGA+TGG | + | chr2_1:17118060-17118079 | Msa0198490:CDS | 35.0% | |
| !! | TTCAAGTTCAATGTTTCTGG+TGG | + | chr2_1:17118096-17118115 | Msa0198490:CDS | 35.0% |
| AACCAGAAATTCACCTTTAG+TGG | + | chr2_1:17118132-17118151 | Msa0198490:three_prime_UTR | 35.0% | |
| !! | TTTCCGTGAACTGTTTTTCA+TGG | + | chr2_1:17118166-17118185 | Msa0198490:three_prime_UTR | 35.0% |
| TGTCCATGAAAAACAGTTCA+CGG | - | chr2_1:17118172-17118191 | None:intergenic | 35.0% | |
| TAACACGCAATACCTCAATA+GGG | - | chr2_1:17118374-17118393 | None:intergenic | 35.0% | |
| !!! | GATGTGAACTGGGAATTTTT+TGG | + | chr2_1:17118432-17118451 | Msa0198490:three_prime_UTR | 35.0% |
| ! | ATCTGAAACTCACTCGTGTA+GGG | - | chr2_1:17110251-17110270 | None:intergenic | 40.0% |
| ! | AATCTGAAACTCACTCGTGT+AGG | - | chr2_1:17110252-17110271 | None:intergenic | 40.0% |
| TTCTCTTCTCACCTCAAGAT+TGG | + | chr2_1:17110391-17110410 | Msa0198490:CDS | 40.0% | |
| TTACCGACGTAATCACTTTG+AGG | + | chr2_1:17110659-17110678 | Msa0198490:intron | 40.0% | |
| ! | AAAGGGCATAAGCAAAGAGA+AGG | + | chr2_1:17110814-17110833 | Msa0198490:intron | 40.0% |
| AGAAGGTTTGTGAGAGCTTA+TGG | + | chr2_1:17110831-17110850 | Msa0198490:intron | 40.0% | |
| GTTTATCCAAACAAGGCCTT+TGG | + | chr2_1:17111023-17111042 | Msa0198490:intron | 40.0% | |
| CAAACAGGCCTATAAACCAA+AGG | - | chr2_1:17111042-17111061 | None:intergenic | 40.0% | |
| ! | CTTTGGTTTATAGGCCTGTT+TGG | + | chr2_1:17111040-17111059 | Msa0198490:intron | 40.0% |
| TAGGCTCAATAGTGCAAAAG+GGG | - | chr2_1:17111452-17111471 | None:intergenic | 40.0% | |
| CTATTGAGCCTAATGAAGCA+AGG | + | chr2_1:17111460-17111479 | Msa0198490:CDS | 40.0% | |
| ACATTGACCCTTGCTTCATT+AGG | - | chr2_1:17111471-17111490 | None:intergenic | 40.0% | |
| ATTGTTCAAGCCAAAAAGCG+AGG | + | chr2_1:17111521-17111540 | Msa0198490:CDS | 40.0% | |
| CAAAAGAGATACACCAGCAA+TGG | - | chr2_1:17111565-17111584 | None:intergenic | 40.0% | |
| AATCCATGACATAGCTGGAT+TGG | + | chr2_1:17111709-17111728 | Msa0198490:CDS | 40.0% | |
| TGCAAAAGTGGTGTGGAAAT+AGG | - | chr2_1:17111836-17111855 | None:intergenic | 40.0% | |
| ATCATGATGCAAAAGTGGTG+TGG | - | chr2_1:17111843-17111862 | None:intergenic | 40.0% | |
| TTGTTTGGTAGGTGCATTTG+AGG | + | chr2_1:17111912-17111931 | Msa0198490:intron | 40.0% | |
| TCGTCTACGTGGATAATATC+TGG | - | chr2_1:17111940-17111959 | None:intergenic | 40.0% | |
| TAACCTCTAAATCCCTCACA+GGG | - | chr2_1:17111972-17111991 | None:intergenic | 40.0% | |
| ATAACCTCTAAATCCCTCAC+AGG | - | chr2_1:17111973-17111992 | None:intergenic | 40.0% | |
| AACAACAATAACGGTTGGCA+AGG | - | chr2_1:17112134-17112153 | None:intergenic | 40.0% | |
| GGGCTTTCTTAACAAACATG+TGG | + | chr2_1:17112207-17112226 | Msa0198490:intron | 40.0% | |
| !!! | TGTGTGTTTTAACGCTAAGG+AGG | + | chr2_1:17112290-17112309 | Msa0198490:intron | 40.0% |
| ATGATGTTACGCAAAGGGAA+AGG | - | chr2_1:17112443-17112462 | None:intergenic | 40.0% | |
| TTCCCTTTGCGTAACATCAT+AGG | + | chr2_1:17112443-17112462 | Msa0198490:intron | 40.0% | |
| CGAGCTTGAATGTTGTCAAA+AGG | + | chr2_1:17112542-17112561 | Msa0198490:CDS | 40.0% | |
| CTAATTTACGTTGAGTCCCA+AGG | + | chr2_1:17112915-17112934 | Msa0198490:intron | 40.0% | |
| GGAATTCAAAATCTCGACCT+CGG | - | chr2_1:17113629-17113648 | None:intergenic | 40.0% | |
| TACCAAGTATACAACAGGCT+TGG | - | chr2_1:17113668-17113687 | None:intergenic | 40.0% | |
| !! | CGTTGGTAACGCGAAATAAT+TGG | - | chr2_1:17113786-17113805 | None:intergenic | 40.0% |
| ! | GTAGCACTGTTAAGTATCGT+TGG | - | chr2_1:17113803-17113822 | None:intergenic | 40.0% |
| TTCTCAAAGTTGGCTGGATA+TGG | + | chr2_1:17113908-17113927 | Msa0198490:intron | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | + | chr2_1:17114095-17114114 | Msa0198490:intron | 40.0% | |
| CTCTCTACTACAGAATCTAC+AGG | - | chr2_1:17114137-17114156 | None:intergenic | 40.0% | |
| GTAGTAGAGAGTAGATCAGA+TGG | + | chr2_1:17114146-17114165 | Msa0198490:intron | 40.0% | |
| TAGAGAGTAGATCAGATGGA+GGG | + | chr2_1:17114150-17114169 | Msa0198490:intron | 40.0% | |
| CTTATCCCACTAAGTGAGTT+CGG | - | chr2_1:17114314-17114333 | None:intergenic | 40.0% | |
| ! | ATAAGGCTTGGTTGTTGTTG+TGG | + | chr2_1:17114329-17114348 | Msa0198490:intron | 40.0% |
| GAATGAATGGTTCATATCCC+AGG | - | chr2_1:17114465-17114484 | None:intergenic | 40.0% | |
| ! | CGCATACCTTTTTCTTGTGA+AGG | + | chr2_1:17114484-17114503 | Msa0198490:intron | 40.0% |
| ATGTGGCCTTCACAAGAAAA+AGG | - | chr2_1:17114493-17114512 | None:intergenic | 40.0% | |
| ATACTTCCATCCAAACACGT+CGG | + | chr2_1:17114520-17114539 | Msa0198490:intron | 40.0% | |
| CTTATATATGCCGACGTGTT+TGG | - | chr2_1:17114533-17114552 | None:intergenic | 40.0% | |
| GGAATGAGACAAAGTCTGAA+TGG | - | chr2_1:17114902-17114921 | None:intergenic | 40.0% | |
| TTCAGACTTTGTCTCATTCC+TGG | + | chr2_1:17114902-17114921 | Msa0198490:intron | 40.0% | |
| TGACAGGACTAACCCAATTT+AGG | - | chr2_1:17115553-17115572 | None:intergenic | 40.0% | |
| !! | TAAATTGGGTTAGTCCTGTC+AGG | + | chr2_1:17115552-17115571 | Msa0198490:intron | 40.0% |
| GTCTGACTATAATCACACCA+TGG | - | chr2_1:17115845-17115864 | None:intergenic | 40.0% | |
| CGACCAAGGGAAAATGAATT+TGG | - | chr2_1:17116026-17116045 | None:intergenic | 40.0% | |
| CTGCGACTTTCAAATTTGGA+TGG | - | chr2_1:17116055-17116074 | None:intergenic | 40.0% | |
| ACGTCTGCGACTTTCAAATT+TGG | - | chr2_1:17116059-17116078 | None:intergenic | 40.0% | |
| ACAGTGTGAAAGGAGATATG+TGG | - | chr2_1:17116460-17116479 | None:intergenic | 40.0% | |
| GTTATGAATGTTCACGGTCT+TGG | + | chr2_1:17116497-17116516 | Msa0198490:intron | 40.0% | |
| GAAATGCACGGTTCTATACT+TGG | + | chr2_1:17116590-17116609 | Msa0198490:intron | 40.0% | |
| CACGGTTCTATACTTGGTAA+TGG | + | chr2_1:17116596-17116615 | Msa0198490:intron | 40.0% | |
| ATGAAAAGAAACTGAAGGGC+TGG | + | chr2_1:17116830-17116849 | Msa0198490:intron | 40.0% | |
| ACACATCAGAACAAAGGAAG+GGG | - | chr2_1:17116892-17116911 | None:intergenic | 40.0% | |
| GAACACATCAGAACAAAGGA+AGG | - | chr2_1:17116894-17116913 | None:intergenic | 40.0% | |
| CAAAAGCTGTACCTTAGACA+TGG | - | chr2_1:17116997-17117016 | None:intergenic | 40.0% | |
| !! | CATGTCTAAGGTACAGCTTT+TGG | + | chr2_1:17116995-17117014 | Msa0198490:intron | 40.0% |
| !! | GCTTCTTTCAGGTTAAGTGT+TGG | + | chr2_1:17117053-17117072 | Msa0198490:intron | 40.0% |
| GCAAATTAGACGCCTAACAA+AGG | + | chr2_1:17117075-17117094 | Msa0198490:CDS | 40.0% | |
| CGACGGTAATTCATATTGCA+AGG | - | chr2_1:17117424-17117443 | None:intergenic | 40.0% | |
| CACTGTTACTCATTGTGGTT+TGG | + | chr2_1:17117503-17117522 | Msa0198490:intron | 40.0% | |
| ! | TATTTTCTTGGCGGCCTTTA+TGG | + | chr2_1:17117553-17117572 | Msa0198490:intron | 40.0% |
| ! | TGCTTTGCAAATGTCGTTTC+AGG | + | chr2_1:17117727-17117746 | Msa0198490:CDS | 40.0% |
| !! | AAGTTCAATGTTTCTGGTGG+AGG | + | chr2_1:17118099-17118118 | Msa0198490:CDS | 40.0% |
| !! | AGTTCAATGTTTCTGGTGGA+GGG | + | chr2_1:17118100-17118119 | Msa0198490:CDS | 40.0% |
| TGCCACTAAAGGTGAATTTC+TGG | - | chr2_1:17118137-17118156 | None:intergenic | 40.0% | |
| CTAACACGCAATACCTCAAT+AGG | - | chr2_1:17118375-17118394 | None:intergenic | 40.0% | |
| !!! | CTCGTGTAGGGTTTTGTTGT+AGG | - | chr2_1:17110239-17110258 | None:intergenic | 45.0% |
| !! | GGATTTAGGAGGCATTGTTG+CGG | - | chr2_1:17110326-17110345 | None:intergenic | 45.0% |
| !! | TTCGATTTGGCGGATTTAGG+AGG | - | chr2_1:17110337-17110356 | None:intergenic | 45.0% |
| TCCTAAATCCGCCAAATCGA+AGG | + | chr2_1:17110336-17110355 | Msa0198490:CDS | 45.0% | |
| !! | TCCTTCGATTTGGCGGATTT+AGG | - | chr2_1:17110340-17110359 | None:intergenic | 45.0% |
| AACTGGAGCTTCCTTCGATT+TGG | - | chr2_1:17110350-17110369 | None:intergenic | 45.0% | |
| GAAGAGAAACGACCAAGGAT+GGG | - | chr2_1:17110379-17110398 | None:intergenic | 45.0% | |
| AGAAGAGAAACGACCAAGGA+TGG | - | chr2_1:17110380-17110399 | None:intergenic | 45.0% | |
| GCTCCTCAAAGTGATTACGT+CGG | - | chr2_1:17110665-17110684 | None:intergenic | 45.0% | |
| !! | CAGGTTGGTTTGCCAAATGT+TGG | + | chr2_1:17111372-17111391 | Msa0198490:intron | 45.0% |
| ! | AATCTGGCTCATACCATTGC+TGG | + | chr2_1:17111549-17111568 | Msa0198490:intron | 45.0% |
| ACAGATCCAACAAACACGTC+AGG | - | chr2_1:17111664-17111683 | None:intergenic | 45.0% | |
| GAACCAATCCAGCTATGTCA+TGG | - | chr2_1:17111715-17111734 | None:intergenic | 45.0% | |
| GAAAAATGCCATCAACAGCC+CGG | - | chr2_1:17111787-17111806 | None:intergenic | 45.0% | |
| TACTGAAGAGTTACGGCTGA+AGG | + | chr2_1:17111993-17112012 | Msa0198490:CDS | 45.0% | |
| AACAATAACGGTTGGCAAGG+AGG | - | chr2_1:17112131-17112150 | None:intergenic | 45.0% | |
| ATTACGTTGCAGCGAACCTT+GGG | - | chr2_1:17112934-17112953 | None:intergenic | 45.0% | |
| AATTACGTTGCAGCGAACCT+TGG | - | chr2_1:17112935-17112954 | None:intergenic | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | + | chr2_1:17112940-17112959 | Msa0198490:intron | 45.0% | |
| ACAAGACAAAAGGTGGCCAA+TGG | - | chr2_1:17113127-17113146 | None:intergenic | 45.0% | |
| GTCAAATCAATTGCCGTCAC+TGG | + | chr2_1:17113336-17113355 | Msa0198490:intron | 45.0% | |
| ! | TCAGGTCAAGGCATTCATTG+AGG | + | chr2_1:17113567-17113586 | Msa0198490:intron | 45.0% |
| ! | GTCAAGGCATTCATTGAGGA+GGG | + | chr2_1:17113571-17113590 | Msa0198490:CDS | 45.0% |
| AGGGAAAAGATGTACGCCTA+GGG | + | chr2_1:17113590-17113609 | Msa0198490:CDS | 45.0% | |
| TGCCAAGCCTGTTGTATACT+TGG | + | chr2_1:17113663-17113682 | Msa0198490:CDS | 45.0% | |
| AAAGTTGGCTGGATATGGCT+CGG | + | chr2_1:17113913-17113932 | Msa0198490:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGTT+GGG | + | chr2_1:17114045-17114064 | Msa0198490:intron | 45.0% | |
| TGGTGGAAAATAGGCTTAGG+TGG | + | chr2_1:17114090-17114109 | Msa0198490:intron | 45.0% | |
| GTAGAGAGTAGATCAGATGG+AGG | + | chr2_1:17114149-17114168 | Msa0198490:intron | 45.0% | |
| AGAGAGTAGATCAGATGGAG+GGG | + | chr2_1:17114151-17114170 | Msa0198490:intron | 45.0% | |
| !! | TTTCCTCTGGCTCTAGTGAT+CGG | - | chr2_1:17114181-17114200 | None:intergenic | 45.0% |
| ACTAAGTGAGTTCGGCTACA+TGG | - | chr2_1:17114306-17114325 | None:intergenic | 45.0% | |
| ATGTAGCCGAACTCACTTAG+TGG | + | chr2_1:17114305-17114324 | Msa0198490:intron | 45.0% | |
| TGTAGCCGAACTCACTTAGT+GGG | + | chr2_1:17114306-17114325 | Msa0198490:intron | 45.0% | |
| CGAACTCACTTAGTGGGATA+AGG | + | chr2_1:17114312-17114331 | Msa0198490:intron | 45.0% | |
| TCACTTAGTGGGATAAGGCT+TGG | + | chr2_1:17114317-17114336 | Msa0198490:intron | 45.0% | |
| TGTGCAGTTGCAAATGCCTT+TGG | - | chr2_1:17114395-17114414 | None:intergenic | 45.0% | |
| AATGGTTCATATCCCAGGCT+GGG | - | chr2_1:17114460-17114479 | None:intergenic | 45.0% | |
| TATATGCCGACGTGTTTGGA+TGG | - | chr2_1:17114529-17114548 | None:intergenic | 45.0% | |
| CTACCTCTGTGCGAATATGA+AGG | + | chr2_1:17114925-17114944 | Msa0198490:intron | 45.0% | |
| CATCCTTCATATTCGCACAG+AGG | - | chr2_1:17114931-17114950 | None:intergenic | 45.0% | |
| TTCAGATATGCCTCCTGATG+AGG | + | chr2_1:17115250-17115269 | Msa0198490:CDS | 45.0% | |
| TCAGTCAGACGGATCTAACA+AGG | + | chr2_1:17115525-17115544 | Msa0198490:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2_1:17114318-17114337 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2_1:17114319-17114338 | None:intergenic | 45.0% |
| ! | GGATAAGGCTTGGTTGTTGT+GGG | + | chr2_1:17114327-17114346 | Msa0198490:intron | 45.0% |
| CACATCAGAACAAAGGAAGG+GGG | - | chr2_1:17116891-17116910 | None:intergenic | 45.0% | |
| TCTGATGTGTTCCTTTGTCG+AGG | + | chr2_1:17116902-17116921 | Msa0198490:intron | 45.0% | |
| ! | TTGCAAAGCACCTAGATCAG+TGG | - | chr2_1:17117717-17117736 | None:intergenic | 45.0% |
| TGGAAGTGAGTCAGCTGTAA+AGG | + | chr2_1:17117778-17117797 | Msa0198490:CDS | 45.0% | |
| AAGCAGACAACTGCCACTAA+AGG | - | chr2_1:17118148-17118167 | None:intergenic | 45.0% | |
| !! | TGGTGAGTTGATCCCTATTG+AGG | + | chr2_1:17118359-17118378 | Msa0198490:three_prime_UTR | 45.0% |
| !!! | ATTATTTTATCAAAATTTAA+AGG | + | chr2_1:17112368-17112387 | Msa0198490:intron | 5.0% |
| !!! | ATAATAAGATAATAATTTTT+TGG | + | chr2_1:17112725-17112744 | Msa0198490:intron | 5.0% |
| !!! | TAATAAGATAATAATTTTTT+GGG | + | chr2_1:17112726-17112745 | Msa0198490:intron | 5.0% |
| CGGCGGAGAGAGATTGAAAT+CGG | - | chr2_1:17110306-17110325 | None:intergenic | 50.0% | |
| !! | TTTAGGAGGCATTGTTGCGG+CGG | - | chr2_1:17110323-17110342 | None:intergenic | 50.0% |
| !! | TGGAGCTTCCTTCGATTTGG+CGG | - | chr2_1:17110347-17110366 | None:intergenic | 50.0% |
| GGTGAGAAGAGAAACGACCA+AGG | - | chr2_1:17110384-17110403 | None:intergenic | 50.0% | |
| CAAAAGGGGAAGTTCTCAGC+AGG | - | chr2_1:17111438-17111457 | None:intergenic | 50.0% | |
| !! | GACATAGCTGGATTGGTTCG+AGG | + | chr2_1:17111716-17111735 | Msa0198490:CDS | 50.0% |
| !! | ATTGGTTCGAGGTGCTCATG+AGG | + | chr2_1:17111727-17111746 | Msa0198490:CDS | 50.0% |
| ! | TTGGTTCGAGGTGCTCATGA+GGG | + | chr2_1:17111728-17111747 | Msa0198490:CDS | 50.0% |
| AGTGGTGTGGAAATAGGAGC+AGG | - | chr2_1:17111830-17111849 | None:intergenic | 50.0% | |
| TGACCCTGTGAGGGATTTAG+AGG | + | chr2_1:17111966-17111985 | Msa0198490:CDS | 50.0% | |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr2_1:17112671-17112690 | Msa0198490:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr2_1:17112672-17112691 | Msa0198490:intron | 50.0% | |
| ! | GGTCAAGGCATTCATTGAGG+AGG | + | chr2_1:17113570-17113589 | Msa0198490:intron | 50.0% |
| GAGGGAAAAGATGTACGCCT+AGG | + | chr2_1:17113589-17113608 | Msa0198490:CDS | 50.0% | |
| GGGAAAAGATGTACGCCTAG+GGG | + | chr2_1:17113591-17113610 | Msa0198490:CDS | 50.0% | |
| AAGATGTACGCCTAGGGGAT+TGG | + | chr2_1:17113596-17113615 | Msa0198490:CDS | 50.0% | |
| CTTGGCAGTAAGCAACTGGA+AGG | - | chr2_1:17113650-17113669 | None:intergenic | 50.0% | |
| AAGTTGGCTGGATATGGCTC+GGG | + | chr2_1:17113914-17113933 | Msa0198490:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGT+TGG | + | chr2_1:17114044-17114063 | Msa0198490:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGTTG+GGG | + | chr2_1:17114046-17114065 | Msa0198490:intron | 50.0% | |
| TCATTTCCTCTTTCCCAGCC+TGG | + | chr2_1:17114444-17114463 | Msa0198490:intron | 50.0% | |
| CATTTCCTCTTTCCCAGCCT+GGG | + | chr2_1:17114445-17114464 | Msa0198490:intron | 50.0% | |
| GAATGGTTCATATCCCAGGC+TGG | - | chr2_1:17114461-17114480 | None:intergenic | 50.0% | |
| ATATTCGCACAGAGGTAGCC+AGG | - | chr2_1:17114923-17114942 | None:intergenic | 50.0% | |
| ACATTTGTTCTCCAGGGTCC+AGG | + | chr2_1:17115175-17115194 | Msa0198490:intron | 50.0% | |
| TTTGTCCACCACCATGTTCC+TGG | - | chr2_1:17115196-17115215 | None:intergenic | 50.0% | |
| AGATATGCCTCCTGATGAGG+CGG | + | chr2_1:17115253-17115272 | Msa0198490:CDS | 50.0% | |
| TATTTAGCCGCCTCATCAGG+AGG | - | chr2_1:17115263-17115282 | None:intergenic | 50.0% | |
| CAGTATTTAGCCGCCTCATC+AGG | - | chr2_1:17115266-17115285 | None:intergenic | 50.0% | |
| TGAGGCGGCTAAATACTGTG+AGG | + | chr2_1:17115268-17115287 | Msa0198490:CDS | 50.0% | |
| GTGAGGCGAACAACGTTCAA+AGG | + | chr2_1:17115285-17115304 | Msa0198490:CDS | 50.0% | |
| GTTAGATCCGTCTGACTGAC+TGG | - | chr2_1:17115524-17115543 | None:intergenic | 50.0% | |
| !! | TTTTTCGACCGGTACCTGAC+AGG | - | chr2_1:17115569-17115588 | None:intergenic | 50.0% |
| !! | CTGGTTCGCAGTTTTTCGAC+CGG | - | chr2_1:17115580-17115599 | None:intergenic | 50.0% |
| AGCTACTTAGCTCAGACACC+CGG | - | chr2_1:17115925-17115944 | None:intergenic | 50.0% | |
| AAGTAGCTGACCCCACTTAG+TGG | + | chr2_1:17115937-17115956 | Msa0198490:intron | 50.0% | |
| AGTAGCTGACCCCACTTAGT+GGG | + | chr2_1:17115938-17115957 | Msa0198490:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr2_1:17115944-17115963 | Msa0198490:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr2_1:17114320-17114339 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr2_1:17115949-17115968 | Msa0198490:intron | 50.0% | |
| ! | GGGATAAGGCTTGGTTGTTG+TGG | + | chr2_1:17114326-17114345 | Msa0198490:intron | 50.0% |
| TTTCACAGCAGGACCTGATG+AGG | + | chr2_1:17116427-17116446 | Msa0198490:CDS | 50.0% | |
| GTTCCTTTGTCGAGGCTTCA+TGG | + | chr2_1:17116910-17116929 | Msa0198490:intron | 50.0% | |
| CAGCTTGAGGAGCCTTTGTT+AGG | - | chr2_1:17117090-17117109 | None:intergenic | 50.0% | |
| GGGGAATGGCTATGCCATAA+AGG | - | chr2_1:17117570-17117589 | None:intergenic | 50.0% | |
| CCAAGGATGGGTCGTTCAAC+TGG | - | chr2_1:17110367-17110386 | None:intergenic | 55.0% | |
| CCAGTTGAACGACCCATCCT+TGG | + | chr2_1:17110364-17110383 | Msa0198490:CDS | 55.0% | |
| !! | TCCCTGACGAGCGTTTTGAG+TGG | + | chr2_1:17111490-17111509 | Msa0198490:CDS | 55.0% |
| GCCACTCAAAACGCTCGTCA+GGG | - | chr2_1:17111494-17111513 | None:intergenic | 55.0% | |
| AGCCACTCAAAACGCTCGTC+AGG | - | chr2_1:17111495-17111514 | None:intergenic | 55.0% | |
| ! | TGGTTCGAGGTGCTCATGAG+GGG | + | chr2_1:17111729-17111748 | Msa0198490:CDS | 55.0% |
| TCTCACATCCGGGCTGTTGA+TGG | + | chr2_1:17111776-17111795 | Msa0198490:CDS | 55.0% | |
| GGTCAACAGTGTCGTCTACG+TGG | - | chr2_1:17111951-17111970 | None:intergenic | 55.0% | |
| ACGACACTGTTGACCCTGTG+AGG | + | chr2_1:17111956-17111975 | Msa0198490:CDS | 55.0% | |
| CGACACTGTTGACCCTGTGA+GGG | + | chr2_1:17111957-17111976 | Msa0198490:CDS | 55.0% | |
| ACATTGACCCAAGTCGGGAC+CGG | - | chr2_1:17112682-17112701 | None:intergenic | 55.0% | |
| CAGGCTTGGCAGTAAGCAAC+TGG | - | chr2_1:17113654-17113673 | None:intergenic | 55.0% | |
| AGTCCGATCACTAGAGCCAG+AGG | + | chr2_1:17114175-17114194 | Msa0198490:intron | 55.0% | |
| CATATCCCAGGCTGGGAAAG+AGG | - | chr2_1:17114453-17114472 | None:intergenic | 55.0% | |
| TTCTCCAGGGTCCAGGAACA+TGG | + | chr2_1:17115182-17115201 | Msa0198490:intron | 55.0% | |
| ! | TCTGACTGACTGGTCAAGGC+CGG | - | chr2_1:17115514-17115533 | None:intergenic | 55.0% |
| GCCTTGACCAGTCAGTCAGA+CGG | + | chr2_1:17115514-17115533 | Msa0198490:intron | 55.0% | |
| ! | TCCGTCTGACTGACTGGTCA+AGG | - | chr2_1:17115518-17115537 | None:intergenic | 55.0% |
| !! | GGGTTAGTCCTGTCAGGTAC+CGG | + | chr2_1:17115558-17115577 | Msa0198490:intron | 55.0% |
| TGGATGGCAATGGCGACCAA+GGG | - | chr2_1:17116039-17116058 | None:intergenic | 55.0% | |
| TTGGATGGCAATGGCGACCA+AGG | - | chr2_1:17116040-17116059 | None:intergenic | 55.0% | |
| ! | GAACAAAGGAAGGGGGTGCA+GGG | - | chr2_1:17116884-17116903 | None:intergenic | 55.0% |
| ! | AGAACAAAGGAAGGGGGTGC+AGG | - | chr2_1:17116885-17116904 | None:intergenic | 55.0% |
| CCACCATGAAGCCTCGACAA+AGG | - | chr2_1:17116916-17116935 | None:intergenic | 55.0% | |
| CCTTTGTCGAGGCTTCATGG+TGG | + | chr2_1:17116913-17116932 | Msa0198490:intron | 55.0% | |
| ACAAAGGCTCCTCAAGCTGC+AGG | + | chr2_1:17117091-17117110 | Msa0198490:CDS | 55.0% | |
| CAAAGGCTCCTCAAGCTGCA+GGG | + | chr2_1:17117092-17117111 | Msa0198490:CDS | 55.0% | |
| AAAGGCTCCTCAAGCTGCAG+GGG | + | chr2_1:17117093-17117112 | Msa0198490:CDS | 55.0% | |
| ! | GAGGTGCTCATGAGGGGCAA+GGG | + | chr2_1:17111735-17111754 | Msa0198490:CDS | 60.0% |
| TGCTCATGAGGGGCAAGGGT+TGG | + | chr2_1:17111739-17111758 | Msa0198490:CDS | 60.0% | |
| GCTCATGAGGGGCAAGGGTT+GGG | + | chr2_1:17111740-17111759 | Msa0198490:CDS | 60.0% | |
| CGGCAGCTTTCCAATCCCCT+AGG | - | chr2_1:17113609-17113628 | None:intergenic | 60.0% | |
| AGGGGATTGGAAAGCTGCCG+AGG | + | chr2_1:17113609-17113628 | Msa0198490:CDS | 60.0% | |
| TCCAGGGTCCAGGAACATGG+TGG | + | chr2_1:17115185-17115204 | Msa0198490:intron | 60.0% | |
| ACCACCATGTTCCTGGACCC+TGG | - | chr2_1:17115189-17115208 | None:intergenic | 60.0% | |
| AGGGTCCAGGAACATGGTGG+TGG | + | chr2_1:17115188-17115207 | Msa0198490:intron | 60.0% | |
| TGGATAGCCCCTGCAGCTTG+AGG | - | chr2_1:17117103-17117122 | None:intergenic | 60.0% | |
| ! | CGAGGTGCTCATGAGGGGCA+AGG | + | chr2_1:17111734-17111753 | Msa0198490:CDS | 65.0% |
| ! | CAAAGGAAGGGGGTGCAGGG+AGG | - | chr2_1:17116881-17116900 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 17110229 | 17118496 | 17110229 | ID=Msa0198490;Name=Msa0198490 |
| chr2_1 | mRNA | 17110229 | 17118496 | 17110229 | ID=Msa0198490-mRNA-1;Parent=Msa0198490;Name=Msa0198490-mRNA-1;_AED=0.11;_eAED=0.11;_QI=102|0.90|0.91|1|1|1|12|365|412 |
| chr2_1 | exon | 17110229 | 17110417 | 17110229 | ID=Msa0198490-mRNA-1:exon:7197;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17111375 | 17111542 | 17111375 | ID=Msa0198490-mRNA-1:exon:7198;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17111692 | 17111815 | 17111692 | ID=Msa0198490-mRNA-1:exon:7199;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17111923 | 17112014 | 17111923 | ID=Msa0198490-mRNA-1:exon:7200;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17112465 | 17112563 | 17112465 | ID=Msa0198490-mRNA-1:exon:7201;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17113571 | 17113684 | 17113571 | ID=Msa0198490-mRNA-1:exon:7202;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17114786 | 17114850 | 17114786 | ID=Msa0198490-mRNA-1:exon:7203;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17115190 | 17115306 | 17115190 | ID=Msa0198490-mRNA-1:exon:7204;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17116373 | 17116448 | 17116373 | ID=Msa0198490-mRNA-1:exon:7205;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17117064 | 17117156 | 17117064 | ID=Msa0198490-mRNA-1:exon:7206;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17117695 | 17117799 | 17117695 | ID=Msa0198490-mRNA-1:exon:7207;Parent=Msa0198490-mRNA-1 |
| chr2_1 | exon | 17118033 | 17118496 | 17118033 | ID=Msa0198490-mRNA-1:exon:7208;Parent=Msa0198490-mRNA-1 |
| chr2_1 | five_prime_UTR | 17110229 | 17110330 | 17110229 | ID=Msa0198490-mRNA-1:five_prime_utr;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17110331 | 17110417 | 17110331 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17111375 | 17111542 | 17111375 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17111692 | 17111815 | 17111692 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17111923 | 17112014 | 17111923 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17112465 | 17112563 | 17112465 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17113571 | 17113684 | 17113571 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17114786 | 17114850 | 17114786 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17115190 | 17115306 | 17115190 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17116373 | 17116448 | 17116373 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17117064 | 17117156 | 17117064 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17117695 | 17117799 | 17117695 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | CDS | 17118033 | 17118131 | 17118033 | ID=Msa0198490-mRNA-1:cds;Parent=Msa0198490-mRNA-1 |
| chr2_1 | three_prime_UTR | 17118132 | 17118496 | 17118132 | ID=Msa0198490-mRNA-1:three_prime_utr;Parent=Msa0198490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
