Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278770 | XP_003594539.1 | 95.146 | 412 | 2 | 1 | 1 | 412 | 1 | 394 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278770 | sp|Q9SA73|OLA1_ARATH | 81.553 | 412 | 58 | 1 | 1 | 412 | 1 | 394 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041490 | Msa0278770 | 0.801042 | 1.084940e-48 | -8.615850e-47 |
| Msa0198490 | Msa0278770 | 0.996701 | 4.989891e-231 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278770 | MtrunA17_Chr2g0292511 | 95.146 | 412 | 2 | 1 | 1 | 412 | 1 | 394 | 0.0 | 801 |
| Msa0278770 | MtrunA17_Chr8g0358201 | 40.310 | 387 | 207 | 6 | 25 | 406 | 50 | 417 | 2.22e-88 | 274 |
| Msa0278770 | MtrunA17_Chr1g0155741 | 32.847 | 137 | 73 | 3 | 27 | 163 | 272 | 389 | 1.42e-12 | 69.3 |
| Msa0278770 | MtrunA17_Chr2g0286181 | 30.986 | 142 | 77 | 3 | 27 | 167 | 321 | 442 | 2.75e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278770 | AT1G30580.1 | 81.553 | 412 | 58 | 1 | 1 | 412 | 1 | 394 | 0.0 | 702 |
| Msa0278770 | AT1G56050.1 | 39.447 | 398 | 217 | 6 | 14 | 406 | 43 | 421 | 2.65e-90 | 279 |
| Msa0278770 | AT1G07615.1 | 33.000 | 100 | 50 | 1 | 27 | 126 | 306 | 388 | 3.34e-11 | 65.5 |
Find 121 sgRNAs with CRISPR-Local
Find 492 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATCCAGTCTTTATTATTT+TGG | 0.087619 | 2_3:-11870631 | None:intergenic |
| TGCCACTAAAGGTGAATTTC+TGG | 0.187841 | 2_3:-11872384 | None:intergenic |
| TGCTTTGCAAATGTCGTTTC+AGG | 0.234512 | 2_3:+11871977 | Msa0278770:CDS |
| GAAACTTGTTCTTCTTTCTT+TGG | 0.236801 | 2_3:-11869051 | None:intergenic |
| TACGTACCATGTGTGAATTT+TGG | 0.247433 | 2_3:-11869077 | None:intergenic |
| AATTTCTCAAAAGAAATTAT+AGG | 0.273078 | 2_3:+11872721 | Msa0278770:three_prime_UTR |
| CTAACACGCAATACCTCAAT+AGG | 0.296014 | 2_3:-11872622 | None:intergenic |
| AGTGTAGACTTTCCAACATT+TGG | 0.320168 | 2_3:-11865629 | None:intergenic |
| AACTGGAGCTTCCTTCGATT+TGG | 0.332167 | 2_3:-11864592 | None:intergenic |
| TTCTCTTCTCACCTCAAGAT+TGG | 0.333366 | 2_3:+11864636 | Msa0278770:CDS |
| TTTGTCCACCACCATGTTCC+TGG | 0.334504 | 2_3:-11869435 | None:intergenic |
| AGAGTAAATTTGATGTGAAC+TGG | 0.336165 | 2_3:+11872671 | Msa0278770:three_prime_UTR |
| TGACCCTGTGAGGGATTTAG+AGG | 0.338036 | 2_3:+11866211 | Msa0278770:CDS |
| CAGCTTGAGGAGCCTTTGTT+AGG | 0.339703 | 2_3:-11871337 | None:intergenic |
| ATCCTTTCTCAAAATCAGTA+TGG | 0.361106 | 2_3:-11871370 | None:intergenic |
| AACCAGAAATTCACCTTTAG+TGG | 0.367060 | 2_3:+11872382 | Msa0278770:three_prime_UTR |
| CCAAGGATGGGTCGTTCAAC+TGG | 0.369239 | 2_3:-11864609 | None:intergenic |
| TCCTTCGATTTGGCGGATTT+AGG | 0.369949 | 2_3:-11864582 | None:intergenic |
| AGCCACTCAAAACGCTCGTC+AGG | 0.375759 | 2_3:-11865737 | None:intergenic |
| TCTCACATCCGGGCTGTTGA+TGG | 0.377798 | 2_3:+11866021 | Msa0278770:CDS |
| GCTCATGAGGGGCAAGGGTT+GGG | 0.388174 | 2_3:+11865985 | Msa0278770:CDS |
| TATATATACACCACTGATCT+AGG | 0.394557 | 2_3:+11871954 | Msa0278770:CDS |
| TCGTCTACGTGGATAATATC+TGG | 0.394590 | 2_3:-11866182 | None:intergenic |
| TGCCAAGCCTGTTGTATACT+TGG | 0.397853 | 2_3:+11867905 | Msa0278770:CDS |
| ATTGTTTATTATTAGGCTGC+TGG | 0.416370 | 2_3:+11872268 | Msa0278770:intron |
| CAGTATTTAGCCGCCTCATC+AGG | 0.422088 | 2_3:-11869505 | None:intergenic |
| CGAGCTTGAATGTTGTCAAA+AGG | 0.422523 | 2_3:+11866786 | Msa0278770:CDS |
| ACATTGACCCTTGCTTCATT+AGG | 0.424285 | 2_3:-11865713 | None:intergenic |
| ATTAGGCTCAATAGTGCAAA+AGG | 0.425631 | 2_3:-11865696 | None:intergenic |
| AAAATATAATGTCACCATCT+TGG | 0.441622 | 2_3:-11872324 | None:intergenic |
| ATGTGGATATTTACCTCATC+AGG | 0.442858 | 2_3:-11870690 | None:intergenic |
| CAGGCTTGGCAGTAAGCAAC+TGG | 0.446559 | 2_3:-11867893 | None:intergenic |
| AAGTTCAATGTTTCTGGTGG+AGG | 0.450367 | 2_3:+11872349 | Msa0278770:CDS |
| TGGAGCTTCCTTCGATTTGG+CGG | 0.453358 | 2_3:-11864589 | None:intergenic |
| TTGTTTGGTAGGTGCATTTG+AGG | 0.455060 | 2_3:+11866157 | Msa0278770:intron |
| TGCTCATGAGGGGCAAGGGT+TGG | 0.460273 | 2_3:+11865984 | Msa0278770:CDS |
| AAGATGTACGCCTAGGGGAT+TGG | 0.461198 | 2_3:+11867838 | Msa0278770:CDS |
| TATGTTACCAAGTATACAAC+AGG | 0.463776 | 2_3:-11867912 | None:intergenic |
| TTAGAAATCCATGACATAGC+TGG | 0.466153 | 2_3:+11865949 | Msa0278770:CDS |
| TTTCAATACACTCACAAAGA+TGG | 0.470261 | 2_3:+11865652 | Msa0278770:CDS |
| AGGTTATTACTGAAGAGTTA+CGG | 0.474516 | 2_3:+11866231 | Msa0278770:CDS |
| ACATTTGTTCTCCAGGGTCC+AGG | 0.476574 | 2_3:+11869417 | Msa0278770:intron |
| AATCCATGACATAGCTGGAT+TGG | 0.477150 | 2_3:+11865954 | Msa0278770:CDS |
| TTCTCCAGGGTCCAGGAACA+TGG | 0.481367 | 2_3:+11869424 | Msa0278770:intron |
| CGAGGTGCTCATGAGGGGCA+AGG | 0.481862 | 2_3:+11865979 | Msa0278770:CDS |
| TGGAAGTGAGTCAGCTGTAA+AGG | 0.482331 | 2_3:+11872028 | Msa0278770:CDS |
| CTTCCCAAAATAATAAAGAC+TGG | 0.484849 | 2_3:+11870627 | Msa0278770:CDS |
| CCAGTTGAACGACCCATCCT+TGG | 0.486370 | 2_3:+11864609 | Msa0278770:CDS |
| CGGCGGAGAGAGATTGAAAT+CGG | 0.487891 | 2_3:-11864548 | None:intergenic |
| GATGAAATTTGATGATCTAA+AGG | 0.491073 | 2_3:+11872001 | Msa0278770:CDS |
| CTTAGGTTAATTATTTCTAG+TGG | 0.494823 | 2_3:+11872514 | Msa0278770:three_prime_UTR |
| TTTGATGATCTAAAGGAACT+TGG | 0.496739 | 2_3:+11872008 | Msa0278770:CDS |
| ACAAAGGCTCCTCAAGCTGC+AGG | 0.508694 | 2_3:+11871341 | Msa0278770:CDS |
| CAGGTTGGTTTGCCAAATGT+TGG | 0.517974 | 2_3:+11865617 | Msa0278770:intron |
| AGAAGAGAAACGACCAAGGA+TGG | 0.519305 | 2_3:-11864622 | None:intergenic |
| TCCTAAATCCGCCAAATCGA+AGG | 0.520199 | 2_3:+11864581 | Msa0278770:CDS |
| TACTGAAGAGTTACGGCTGA+AGG | 0.521340 | 2_3:+11866238 | Msa0278770:CDS |
| GCTGGAAAATATAAACAAGA+AGG | 0.524187 | 2_3:+11872286 | Msa0278770:CDS |
| TTCAAGTTCAATGTTTCTGG+TGG | 0.536287 | 2_3:+11872346 | Msa0278770:CDS |
| CAAAAGGGGAAGTTCTCAGC+AGG | 0.538630 | 2_3:-11865680 | None:intergenic |
| TAACACGCAATACCTCAATA+GGG | 0.540267 | 2_3:-11872621 | None:intergenic |
| TTAGGCTCAATAGTGCAAAA+GGG | 0.543307 | 2_3:-11865695 | None:intergenic |
| ATCTGAAACTCACTCGTGTA+GGG | 0.545938 | 2_3:-11864493 | None:intergenic |
| GACATAGCTGGATTGGTTCG+AGG | 0.547428 | 2_3:+11865961 | Msa0278770:CDS |
| TTGGTTCGAGGTGCTCATGA+GGG | 0.547681 | 2_3:+11865973 | Msa0278770:CDS |
| ATAACCTCTAAATCCCTCAC+AGG | 0.552003 | 2_3:-11866215 | None:intergenic |
| GCTTCTTTCAGGTTAAGTGT+TGG | 0.554283 | 2_3:+11871303 | Msa0278770:intron |
| AGGGAAAAGATGTACGCCTA+GGG | 0.554324 | 2_3:+11867832 | Msa0278770:CDS |
| TTCGATTTGGCGGATTTAGG+AGG | 0.558249 | 2_3:-11864579 | None:intergenic |
| AATCTGAAACTCACTCGTGT+AGG | 0.559160 | 2_3:-11864494 | None:intergenic |
| CGGCAGCTTTCCAATCCCCT+AGG | 0.561018 | 2_3:-11867848 | None:intergenic |
| AGTTCAATGTTTCTGGTGGA+GGG | 0.562003 | 2_3:+11872350 | Msa0278770:CDS |
| AAGCAGACAACTGCCACTAA+AGG | 0.563415 | 2_3:-11872395 | None:intergenic |
| TTCAGATATGCCTCCTGATG+AGG | 0.565036 | 2_3:+11869492 | Msa0278770:CDS |
| GAAAGGATTTATTTGTGCTG+AGG | 0.566045 | 2_3:+11871385 | Msa0278770:CDS |
| ATTGGTTCGAGGTGCTCATG+AGG | 0.566137 | 2_3:+11865972 | Msa0278770:CDS |
| AAAACTTATGTGGTCCAAGA+TGG | 0.567578 | 2_3:+11872310 | Msa0278770:CDS |
| TGGATAGCCCCTGCAGCTTG+AGG | 0.571503 | 2_3:-11871350 | None:intergenic |
| GAGGGAAAAGATGTACGCCT+AGG | 0.572957 | 2_3:+11867831 | Msa0278770:CDS |
| CAAAGGCTCCTCAAGCTGCA+GGG | 0.574970 | 2_3:+11871342 | Msa0278770:CDS |
| TCAGGTCAAGGCATTCATTG+AGG | 0.575043 | 2_3:+11867809 | Msa0278770:intron |
| GAACCAATCCAGCTATGTCA+TGG | 0.579932 | 2_3:-11865957 | None:intergenic |
| TGGTGAGTTGATCCCTATTG+AGG | 0.581007 | 2_3:+11872609 | Msa0278770:three_prime_UTR |
| CTGGAAAATATAAACAAGAA+GGG | 0.582742 | 2_3:+11872287 | Msa0278770:CDS |
| GTGAGGCGAACAACGTTCAA+AGG | 0.582805 | 2_3:+11869527 | Msa0278770:CDS |
| TACCAAGTATACAACAGGCT+TGG | 0.583923 | 2_3:-11867907 | None:intergenic |
| AGGGTCCAGGAACATGGTGG+TGG | 0.584742 | 2_3:+11869430 | Msa0278770:intron |
| ATCTTGAAAAGAGCATGAAG+AGG | 0.584769 | 2_3:+11866740 | Msa0278770:CDS |
| TTCTCTAAGACACAGCTGAA+AGG | 0.586644 | 2_3:-11869463 | None:intergenic |
| GAGGTGCTCATGAGGGGCAA+GGG | 0.588995 | 2_3:+11865980 | Msa0278770:CDS |
| CTATTGAGCCTAATGAAGCA+AGG | 0.590462 | 2_3:+11865705 | Msa0278770:CDS |
| GTCAAGGCATTCATTGAGGA+GGG | 0.593032 | 2_3:+11867813 | Msa0278770:CDS |
| AGAATACGATTCCAATCTTG+AGG | 0.593260 | 2_3:-11864647 | None:intergenic |
| ACAAGAAGGGAAAACTTATG+TGG | 0.593833 | 2_3:+11872300 | Msa0278770:CDS |
| AAAGGCTCCTCAAGCTGCAG+GGG | 0.596118 | 2_3:+11871343 | Msa0278770:CDS |
| GCAAATTAGACGCCTAACAA+AGG | 0.601410 | 2_3:+11871325 | Msa0278770:CDS |
| GGTCAAGGCATTCATTGAGG+AGG | 0.601452 | 2_3:+11867812 | Msa0278770:intron |
| GAGTAAATTTGATGTGAACT+GGG | 0.606431 | 2_3:+11872672 | Msa0278770:three_prime_UTR |
| GCCACTCAAAACGCTCGTCA+GGG | 0.607437 | 2_3:-11865736 | None:intergenic |
| GAAGAGAAACGACCAAGGAT+GGG | 0.608124 | 2_3:-11864621 | None:intergenic |
| AGGGGATTGGAAAGCTGCCG+AGG | 0.611014 | 2_3:+11867851 | Msa0278770:CDS |
| TAGGCTCAATAGTGCAAAAG+GGG | 0.614822 | 2_3:-11865694 | None:intergenic |
| TTTCACAGCAGGACCTGATG+AGG | 0.615456 | 2_3:+11870677 | Msa0278770:CDS |
| TGGTTCGAGGTGCTCATGAG+GGG | 0.617191 | 2_3:+11865974 | Msa0278770:CDS |
| TATTTAGCCGCCTCATCAGG+AGG | 0.619128 | 2_3:-11869502 | None:intergenic |
| TTCTTCCCAAAATTCACACA+TGG | 0.624147 | 2_3:+11869071 | Msa0278770:CDS |
| GGAATTCAAAATCTCGACCT+CGG | 0.625649 | 2_3:-11867868 | None:intergenic |
| CTTGGCAGTAAGCAACTGGA+AGG | 0.630484 | 2_3:-11867889 | None:intergenic |
| TTTAGGAGGCATTGTTGCGG+CGG | 0.633154 | 2_3:-11864565 | None:intergenic |
| TATTGAGCCTAATGAAGCAA+GGG | 0.635871 | 2_3:+11865706 | Msa0278770:CDS |
| CGACACTGTTGACCCTGTGA+GGG | 0.636940 | 2_3:+11866202 | Msa0278770:CDS |
| AGATATGCCTCCTGATGAGG+CGG | 0.638742 | 2_3:+11869495 | Msa0278770:CDS |
| ACGACACTGTTGACCCTGTG+AGG | 0.640959 | 2_3:+11866201 | Msa0278770:CDS |
| GGATTTAGGAGGCATTGTTG+CGG | 0.651605 | 2_3:-11864568 | None:intergenic |
| TCCAGGGTCCAGGAACATGG+TGG | 0.661205 | 2_3:+11869427 | Msa0278770:intron |
| TTGCAAAGCACCTAGATCAG+TGG | 0.665194 | 2_3:-11871964 | None:intergenic |
| GGTCAACAGTGTCGTCTACG+TGG | 0.682008 | 2_3:-11866193 | None:intergenic |
| GGGAAAAGATGTACGCCTAG+GGG | 0.687762 | 2_3:+11867833 | Msa0278770:CDS |
| GGTGAGAAGAGAAACGACCA+AGG | 0.698806 | 2_3:-11864626 | None:intergenic |
| TAACCTCTAAATCCCTCACA+GGG | 0.708122 | 2_3:-11866214 | None:intergenic |
| TGAGGCGGCTAAATACTGTG+AGG | 0.765226 | 2_3:+11869510 | Msa0278770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr2_3:11867018-11867037 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr2_3:11867019-11867038 | None:intergenic | 10.0% |
| !! | AATACATTACTTTAATAAAA+TGG | + | chr2_3:11867503-11867522 | Msa0278770:intron | 10.0% |
| !! | ATACATTACTTTAATAAAAT+GGG | + | chr2_3:11867504-11867523 | Msa0278770:intron | 10.0% |
| !!! | ATTAAGTTGAAATTTTTTTA+AGG | - | chr2_3:11869701-11869720 | None:intergenic | 10.0% |
| !! | GATTAAAAAATAAAAAACAA+AGG | - | chr2_3:11870503-11870522 | None:intergenic | 10.0% |
| !! | TAAAAAATAAAAATAAATGC+TGG | - | chr2_3:11871539-11871558 | None:intergenic | 10.0% |
| !! | TTTAGTTATCTATTATTTGA+TGG | + | chr2_3:11865866-11865885 | Msa0278770:intron | 15.0% |
| !! | TTCAAAAAATAAATAATGGT+TGG | - | chr2_3:11866310-11866329 | None:intergenic | 15.0% |
| !! | CCTATTCAAAAAATAAATAA+TGG | - | chr2_3:11866314-11866333 | None:intergenic | 15.0% |
| !!! | CCATTATTTATTTTTTGAAT+AGG | + | chr2_3:11866311-11866330 | Msa0278770:intron | 15.0% |
| !! | AACAATTAACATACTAATAT+TGG | - | chr2_3:11866337-11866356 | None:intergenic | 15.0% |
| !!! | AAACATCAATTTTTTTTGAT+TGG | + | chr2_3:11866404-11866423 | Msa0278770:intron | 15.0% |
| !! | TTAAAGAAAAACAAAATCAA+TGG | - | chr2_3:11866497-11866516 | None:intergenic | 15.0% |
| !! | AAAAGAAATTACAATGAATT+TGG | - | chr2_3:11866572-11866591 | None:intergenic | 15.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | + | chr2_3:11866866-11866885 | Msa0278770:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr2_3:11866904-11866923 | Msa0278770:intron | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr2_3:11867304-11867323 | Msa0278770:intron | 15.0% |
| !! | ATATAAAATAACAAGACAAA+AGG | - | chr2_3:11867381-11867400 | None:intergenic | 15.0% |
| !!! | TTGTCTTACTTTTTTTTTTT+GGG | + | chr2_3:11867436-11867455 | Msa0278770:intron | 15.0% |
| !! | TTTATTAAAGTAATGTATTG+TGG | - | chr2_3:11867502-11867521 | None:intergenic | 15.0% |
| !!! | TAAATATAAGATGAACATTT+TGG | + | chr2_3:11867768-11867787 | Msa0278770:intron | 15.0% |
| !! | TATTAATCATAAACCATATT+TGG | - | chr2_3:11868503-11868522 | None:intergenic | 15.0% |
| !! | TTATGATTAATAGAACATTA+TGG | + | chr2_3:11868511-11868530 | Msa0278770:intron | 15.0% |
| !! | CAAATATTTAGAGAATAATA+AGG | - | chr2_3:11869347-11869366 | None:intergenic | 15.0% |
| !! | ATTATTCTCTAAATATTTGT+TGG | + | chr2_3:11869348-11869367 | Msa0278770:intron | 15.0% |
| !! | TACTTATACATCAAATATTA+AGG | + | chr2_3:11869634-11869653 | Msa0278770:intron | 15.0% |
| !!! | ATTCATATTTTATAGATATC+CGG | + | chr2_3:11869734-11869753 | Msa0278770:intron | 15.0% |
| !! | AACAAGTATTTATTTATTTC+TGG | + | chr2_3:11870064-11870083 | Msa0278770:intron | 15.0% |
| !! | AATCTTAATTGTGATAAAAA+GGG | - | chr2_3:11870447-11870466 | None:intergenic | 15.0% |
| !! | TAATCTTAATTGTGATAAAA+AGG | - | chr2_3:11870448-11870467 | None:intergenic | 15.0% |
| !!! | CCAAATCTTTAAAATTAATA+TGG | - | chr2_3:11870555-11870574 | None:intergenic | 15.0% |
| !!! | CCATATTAATTTTAAAGATT+TGG | + | chr2_3:11870552-11870571 | Msa0278770:intron | 15.0% |
| !! | AGAAACTAATAATTATAGTT+TGG | - | chr2_3:11870786-11870805 | None:intergenic | 15.0% |
| !! | TTGTTGTATTGTTTATTATT+AGG | + | chr2_3:11872261-11872280 | Msa0278770:intron | 15.0% |
| !!! | TAACTTAAACACATTTTAAT+CGG | - | chr2_3:11872558-11872577 | None:intergenic | 15.0% |
| !! | AATTTCTCAAAAGAAATTAT+AGG | + | chr2_3:11872721-11872740 | Msa0278770:three_prime_UTR | 15.0% |
| !! | CCATTATTGTAATTGAAAAA+GGG | - | chr2_3:11864725-11864744 | None:intergenic | 20.0% |
| !!! | CCTTTTTCAATTACAATAAT+GGG | + | chr2_3:11864723-11864742 | Msa0278770:intron | 20.0% |
| !! | TATAAAGAATCAATTAAGCA+TGG | - | chr2_3:11864771-11864790 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTTGAGAATGATT+TGG | + | chr2_3:11864866-11864885 | Msa0278770:intron | 20.0% |
| !!! | TTTAACTGTATTGTATCTTT+TGG | + | chr2_3:11865466-11865485 | Msa0278770:intron | 20.0% |
| !! | TCATTTAAGTGCTTATATAT+AGG | - | chr2_3:11865503-11865522 | None:intergenic | 20.0% |
| !!! | TTATGTTGTTTAATCAAACA+TGG | + | chr2_3:11865549-11865568 | Msa0278770:intron | 20.0% |
| !!! | TGATATTGTCATATTGATTT+CGG | + | chr2_3:11866112-11866131 | Msa0278770:intron | 20.0% |
| !!! | CCAATTTTATGATAAAGAAA+AGG | - | chr2_3:11866279-11866298 | None:intergenic | 20.0% |
| !!! | CCTTTTCTTTATCATAAAAT+TGG | + | chr2_3:11866276-11866295 | Msa0278770:intron | 20.0% |
| !!! | TTTATCATAAAATTGGCTTT+TGG | + | chr2_3:11866283-11866302 | Msa0278770:intron | 20.0% |
| !!! | TTATCATAAAATTGGCTTTT+GGG | + | chr2_3:11866284-11866303 | Msa0278770:intron | 20.0% |
| !! | AGTATGTTAATTGTTATGTT+AGG | + | chr2_3:11866342-11866361 | Msa0278770:intron | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr2_3:11867331-11867350 | None:intergenic | 20.0% |
| !!! | GTTGTCTTACTTTTTTTTTT+TGG | + | chr2_3:11867435-11867454 | Msa0278770:intron | 20.0% |
| !!! | TTTTTTTTTGGGTGTTTTAT+TGG | + | chr2_3:11867447-11867466 | Msa0278770:intron | 20.0% |
| !! | AATTTGATATTTCTCAAAGT+TGG | + | chr2_3:11868140-11868159 | Msa0278770:intron | 20.0% |
| !! | CTATAAAAGAAATTACAATG+TGG | - | chr2_3:11868217-11868236 | None:intergenic | 20.0% |
| !!! | CACATTGTAATTTCTTTTAT+AGG | + | chr2_3:11868215-11868234 | Msa0278770:intron | 20.0% |
| !!! | TTTGATTATTTTCTATCCAA+AGG | + | chr2_3:11868618-11868637 | Msa0278770:intron | 20.0% |
| !! | ATAAAGTACATGAAACAATA+TGG | - | chr2_3:11868954-11868973 | None:intergenic | 20.0% |
| !! | TAAAATGCAAGTATTAAAGA+TGG | - | chr2_3:11869001-11869020 | None:intergenic | 20.0% |
| !!! | TAAATATTTTCTTCTTCTAG+TGG | - | chr2_3:11869239-11869258 | None:intergenic | 20.0% |
| !! | TCATACATTTAATAGAAGTA+AGG | - | chr2_3:11869570-11869589 | None:intergenic | 20.0% |
| !! | CTATAAAATATGAATCTATG+TGG | - | chr2_3:11869729-11869748 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAAGCAAAGAAAC+TGG | - | chr2_3:11869871-11869890 | None:intergenic | 20.0% |
| !! | CACAGAAAATAATGAATATT+AGG | - | chr2_3:11870349-11870368 | None:intergenic | 20.0% |
| !!! | AATCCAGTCTTTATTATTTT+GGG | - | chr2_3:11870633-11870652 | None:intergenic | 20.0% |
| !! | TAAATAGTTATGAATGTTCA+CGG | + | chr2_3:11870741-11870760 | Msa0278770:intron | 20.0% |
| !!! | GATTTATAATTTGAAATGCA+CGG | + | chr2_3:11870828-11870847 | Msa0278770:intron | 20.0% |
| !!! | TATTTTTTACAAACAAGAAC+AGG | + | chr2_3:11871550-11871569 | Msa0278770:intron | 20.0% |
| !!! | ATTCTAAGATTGAATACTAA+AGG | + | chr2_3:11871582-11871601 | Msa0278770:intron | 20.0% |
| !!! | TAAGATTGTTTCTTATTCTA+TGG | + | chr2_3:11871724-11871743 | Msa0278770:intron | 20.0% |
| !!! | CAGTTATATCTAAACATTTT+AGG | - | chr2_3:11872103-11872122 | None:intergenic | 20.0% |
| !! | ATGTTTAGATATAACTGTAA+TGG | + | chr2_3:11872106-11872125 | Msa0278770:intron | 20.0% |
| !!! | TGTTTATGTTGTTAGTTTAT+AGG | + | chr2_3:11872207-11872226 | Msa0278770:intron | 20.0% |
| !!! | TTAGTTTATAGGTTCTTTTA+GGG | + | chr2_3:11872218-11872237 | Msa0278770:intron | 20.0% |
| !! | TTATATAATGCTCAAAAACA+TGG | - | chr2_3:11872451-11872470 | None:intergenic | 20.0% |
| !!! | AGTTTTGAATACATAAATGT+TGG | + | chr2_3:11872589-11872608 | Msa0278770:three_prime_UTR | 20.0% |
| !!! | TTTCTTTTGAGAAATTCAAT+TGG | - | chr2_3:11872717-11872736 | None:intergenic | 20.0% |
| !!! | CCCTTTTTCAATTACAATAA+TGG | + | chr2_3:11864722-11864741 | Msa0278770:intron | 25.0% |
| ! | CCCATTATTGTAATTGAAAA+AGG | - | chr2_3:11864726-11864745 | None:intergenic | 25.0% |
| ! | ATAAATAAACAGCAACTCAA+TGG | - | chr2_3:11864816-11864835 | None:intergenic | 25.0% |
| ! | TTGTTTGTTTGTTTCAATAG+CGG | + | chr2_3:11864957-11864976 | Msa0278770:intron | 25.0% |
| ! | AATTGTCTGAAAACGATTAT+TGG | + | chr2_3:11865005-11865024 | Msa0278770:intron | 25.0% |
| ! | TTAATAACCCAAATAGAAAC+AGG | - | chr2_3:11865031-11865050 | None:intergenic | 25.0% |
| !! | GGTTATTAAAGTTGATCAAA+GGG | + | chr2_3:11865042-11865061 | Msa0278770:intron | 25.0% |
| !!! | CTTATTTTCATAATCTCTCA+AGG | + | chr2_3:11865424-11865443 | Msa0278770:intron | 25.0% |
| ! | TTATTATTACTCTGTTGTTC+AGG | + | chr2_3:11865598-11865617 | Msa0278770:intron | 25.0% |
| ! | AGATAACTAAAAGTTAGTGA+CGG | - | chr2_3:11865857-11865876 | None:intergenic | 25.0% |
| !!! | ATAGTTTTTTATCTCACATC+CGG | + | chr2_3:11866010-11866029 | Msa0278770:CDS | 25.0% |
| ! | GTTTGATCAAACAACAATAA+CGG | - | chr2_3:11866388-11866407 | None:intergenic | 25.0% |
| !! | TAAAGTACATGGTCTTTTAA+GGG | + | chr2_3:11866430-11866449 | Msa0278770:intron | 25.0% |
| !! | TACAATGAATTTGGAGTAAA+GGG | - | chr2_3:11866563-11866582 | None:intergenic | 25.0% |
| !! | TTACAATGAATTTGGAGTAA+AGG | - | chr2_3:11866564-11866583 | None:intergenic | 25.0% |
| ! | AACAAGAAGTTCAATTGAAA+AGG | - | chr2_3:11866643-11866662 | None:intergenic | 25.0% |
| !!! | AACTAATTTGCCTTTTTGTT+TGG | + | chr2_3:11867211-11867230 | Msa0278770:intron | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr2_3:11867326-11867345 | None:intergenic | 25.0% |
| !!! | ATAGAGTTTTAACTGTACTA+TGG | + | chr2_3:11867345-11867364 | Msa0278770:intron | 25.0% |
| ! | TAAAATAACAAGACAAAAGG+TGG | - | chr2_3:11867378-11867397 | None:intergenic | 25.0% |
| ! | TGCAACAATATTCTCAAATT+TGG | + | chr2_3:11867537-11867556 | Msa0278770:intron | 25.0% |
| ! | GCAACAATATTCTCAAATTT+GGG | + | chr2_3:11867538-11867557 | Msa0278770:intron | 25.0% |
| ! | TATACACTCAAAAAAAGTTG+TGG | + | chr2_3:11867744-11867763 | Msa0278770:intron | 25.0% |
| ! | ATACACTCAAAAAAAGTTGT+GGG | + | chr2_3:11867745-11867764 | Msa0278770:intron | 25.0% |
| !! | ATATAAGATGAACATTTTGG+TGG | + | chr2_3:11867771-11867790 | Msa0278770:intron | 25.0% |
| !!! | TTTGACTTTTTGTATGTCTT+TGG | + | chr2_3:11867955-11867974 | Msa0278770:intron | 25.0% |
| ! | TTAACAGTGCTACATAATTT+GGG | + | chr2_3:11868052-11868071 | Msa0278770:intron | 25.0% |
| ! | TCCTAAGTATAATAATCGTT+TGG | + | chr2_3:11868242-11868261 | Msa0278770:intron | 25.0% |
| ! | ACCAAACGATTATTATACTT+AGG | - | chr2_3:11868246-11868265 | None:intergenic | 25.0% |
| !! | TAGAAAATATGGTGGAAAAT+AGG | + | chr2_3:11868323-11868342 | Msa0278770:intron | 25.0% |
| !! | GTTTCACTTATAGTTTTTCT+AGG | - | chr2_3:11868447-11868466 | None:intergenic | 25.0% |
| ! | AAACTATAAGTGAAACCATT+AGG | + | chr2_3:11868451-11868470 | Msa0278770:intron | 25.0% |
| !!! | GAAAATTCTAGAACATGAAA+TGG | - | chr2_3:11868839-11868858 | None:intergenic | 25.0% |
| ! | TAAGGAAAAACAGAAAAACT+AGG | - | chr2_3:11869329-11869348 | None:intergenic | 25.0% |
| ! | GAATAGTAGTTGCATATTAA+TGG | - | chr2_3:11869950-11869969 | None:intergenic | 25.0% |
| !! | CAGTATAGTATGATACATTT+TGG | - | chr2_3:11869983-11870002 | None:intergenic | 25.0% |
| ! | TAATATATGACATGTGAAAG+CGG | - | chr2_3:11870251-11870270 | None:intergenic | 25.0% |
| ! | AATAAAAAACAAAGGCAAAC+AGG | - | chr2_3:11870495-11870514 | None:intergenic | 25.0% |
| !! | GAATCCAGTCTTTATTATTT+TGG | - | chr2_3:11870634-11870653 | None:intergenic | 25.0% |
| ! | CTAATAATTATAGTTTGGCA+AGG | - | chr2_3:11870781-11870800 | None:intergenic | 25.0% |
| ! | ATTGAATGAAAAGAAACTGA+AGG | + | chr2_3:11871075-11871094 | Msa0278770:intron | 25.0% |
| ! | TTGAATGAAAAGAAACTGAA+GGG | + | chr2_3:11871076-11871095 | Msa0278770:intron | 25.0% |
| !! | TTTGCTTGAATTCTTTTGTT+TGG | + | chr2_3:11871216-11871235 | Msa0278770:intron | 25.0% |
| ! | CACAAAAGTTACTAAATGAA+AGG | - | chr2_3:11871273-11871292 | None:intergenic | 25.0% |
| !! | CTTTCATTTAGTAACTTTTG+TGG | + | chr2_3:11871271-11871290 | Msa0278770:intron | 25.0% |
| !! | TGAGGTAAGTTCATTAATTT+TGG | + | chr2_3:11871403-11871422 | Msa0278770:intron | 25.0% |
| ! | GTTAAATAGGAGAGATAATA+TGG | - | chr2_3:11871444-11871463 | None:intergenic | 25.0% |
| ! | GCTACGTAAATAAGTTAAAT+AGG | - | chr2_3:11871457-11871476 | None:intergenic | 25.0% |
| ! | GAAAATAGAATAAGAACTGT+TGG | - | chr2_3:11871790-11871809 | None:intergenic | 25.0% |
| !! | CAGTTCTTATTCTATTTTCT+TGG | + | chr2_3:11871791-11871810 | Msa0278770:intron | 25.0% |
| !! | TTCTTATTCTATTTTCTTGG+CGG | + | chr2_3:11871794-11871813 | Msa0278770:intron | 25.0% |
| !! | TGAACACATATTTTCATAAG+GGG | - | chr2_3:11871839-11871858 | None:intergenic | 25.0% |
| !! | GTGAACACATATTTTCATAA+GGG | - | chr2_3:11871840-11871859 | None:intergenic | 25.0% |
| !! | AGTGAACACATATTTTCATA+AGG | - | chr2_3:11871841-11871860 | None:intergenic | 25.0% |
| ! | TTATGAAAATATGTGTTCAC+TGG | + | chr2_3:11871840-11871859 | Msa0278770:intron | 25.0% |
| !! | GATGAAATTTGATGATCTAA+AGG | + | chr2_3:11872001-11872020 | Msa0278770:CDS | 25.0% |
| !!! | GTTAGTTTATAGGTTCTTTT+AGG | + | chr2_3:11872217-11872236 | Msa0278770:intron | 25.0% |
| ! | CTGGAAAATATAAACAAGAA+GGG | + | chr2_3:11872287-11872306 | Msa0278770:CDS | 25.0% |
| ! | AAAATATAATGTCACCATCT+TGG | - | chr2_3:11872327-11872346 | None:intergenic | 25.0% |
| !!! | TTTTTCAAGTTCAATGTTTC+TGG | + | chr2_3:11872343-11872362 | Msa0278770:CDS | 25.0% |
| !!! | GAAGTTGAAAGTGTAATTTT+TGG | + | chr2_3:11872471-11872490 | Msa0278770:three_prime_UTR | 25.0% |
| !! | TTTTCATGAACTATGTACTT+AGG | + | chr2_3:11872497-11872516 | Msa0278770:three_prime_UTR | 25.0% |
| !!! | CTTAGGTTAATTATTTCTAG+TGG | + | chr2_3:11872514-11872533 | Msa0278770:three_prime_UTR | 25.0% |
| !!! | AAACACATTTTAATCGGAAA+TGG | - | chr2_3:11872552-11872571 | None:intergenic | 25.0% |
| ! | CATGGAATGAAGTTGATTAA+TGG | - | chr2_3:11864753-11864772 | None:intergenic | 30.0% |
| !! | ATTATTGGCCTGTTTCTATT+TGG | + | chr2_3:11865020-11865039 | Msa0278770:intron | 30.0% |
| !! | TTATTGGCCTGTTTCTATTT+GGG | + | chr2_3:11865021-11865040 | Msa0278770:intron | 30.0% |
| ! | GGGTTATTAAAGTTGATCAA+AGG | + | chr2_3:11865041-11865060 | Msa0278770:intron | 30.0% |
| TTTAGCTGTTTATCCAAACA+AGG | + | chr2_3:11865261-11865280 | Msa0278770:intron | 30.0% | |
| TAAATAAGCCATATCCAAAC+AGG | - | chr2_3:11865302-11865321 | None:intergenic | 30.0% | |
| TTTCAATACACTCACAAAGA+TGG | + | chr2_3:11865652-11865671 | Msa0278770:CDS | 30.0% | |
| TTTGTTGGATCTGTAAATAC+AGG | + | chr2_3:11865915-11865934 | Msa0278770:intron | 30.0% | |
| !!! | TAGTTTTTTATCTCACATCC+GGG | + | chr2_3:11866011-11866030 | Msa0278770:CDS | 30.0% |
| ATAACATCATGATGCAAAAG+TGG | - | chr2_3:11866093-11866112 | None:intergenic | 30.0% | |
| ! | AACCTATAGTCATTGTTGTT+TGG | + | chr2_3:11866142-11866161 | Msa0278770:intron | 30.0% |
| TACCAAACAACAATGACTAT+AGG | - | chr2_3:11866147-11866166 | None:intergenic | 30.0% | |
| !! | TATAGTCATTGTTGTTTGGT+AGG | + | chr2_3:11866146-11866165 | Msa0278770:intron | 30.0% |
| AGGTTATTACTGAAGAGTTA+CGG | + | chr2_3:11866231-11866250 | Msa0278770:CDS | 30.0% | |
| ! | TTGATTGGTTGTAAAGTACA+TGG | + | chr2_3:11866419-11866438 | Msa0278770:intron | 30.0% |
| ! | GTAAAGTACATGGTCTTTTA+AGG | + | chr2_3:11866429-11866448 | Msa0278770:intron | 30.0% |
| ! | AAAGTACATGGTCTTTTAAG+GGG | + | chr2_3:11866431-11866450 | Msa0278770:intron | 30.0% |
| TTTCTTAACAAACATGTGGA+AGG | + | chr2_3:11866456-11866475 | Msa0278770:intron | 30.0% | |
| !!! | TTTTTTACATTGACCCAAGT+CGG | - | chr2_3:11866932-11866951 | None:intergenic | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr2_3:11866991-11867010 | Msa0278770:intron | 30.0% |
| TTGGGACCGAAAATTATAAA+GGG | - | chr2_3:11867000-11867019 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | - | chr2_3:11867093-11867112 | None:intergenic | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr2_3:11867224-11867243 | None:intergenic | 30.0% | |
| TAATATAAGTCATCCAGTGA+CGG | - | chr2_3:11867596-11867615 | None:intergenic | 30.0% | |
| ! | TATTAGCTCTTAAAGAAGCA+TGG | + | chr2_3:11867611-11867630 | Msa0278770:intron | 30.0% |
| !!! | TGGCAATTTTTTACATCTTC+AGG | + | chr2_3:11867791-11867810 | Msa0278770:intron | 30.0% |
| !!! | TTTTTTACATCTTCAGGTCA+AGG | + | chr2_3:11867797-11867816 | Msa0278770:intron | 30.0% |
| TATGTTACCAAGTATACAAC+AGG | - | chr2_3:11867915-11867934 | None:intergenic | 30.0% | |
| TACGAAATGACATAGATTAC+AGG | - | chr2_3:11867992-11868011 | None:intergenic | 30.0% | |
| CTTAACAGTGCTACATAATT+TGG | + | chr2_3:11868051-11868070 | Msa0278770:intron | 30.0% | |
| ! | TAATTTGGGATATGTCTTGA+TGG | + | chr2_3:11868066-11868085 | Msa0278770:intron | 30.0% |
| ! | GTGTCTGTTTTCTATATGTT+TGG | + | chr2_3:11868102-11868121 | Msa0278770:intron | 30.0% |
| AGCACCTATAGTAGAAAATA+TGG | + | chr2_3:11868312-11868331 | Msa0278770:intron | 30.0% | |
| ACCTATAGTAGAAAATATGG+TGG | + | chr2_3:11868315-11868334 | Msa0278770:intron | 30.0% | |
| ! | TCCACCATATTTTCTACTAT+AGG | - | chr2_3:11868319-11868338 | None:intergenic | 30.0% |
| TAATCTCTAATCGTTCCTAA+TGG | - | chr2_3:11868469-11868488 | None:intergenic | 30.0% | |
| ACGATTAGAGATTAATGAGT+TGG | + | chr2_3:11868475-11868494 | Msa0278770:intron | 30.0% | |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | chr2_3:11868487-11868506 | Msa0278770:intron | 30.0% |
| ! | ATGGAAGTATGTATGAAATG+TGG | - | chr2_3:11868752-11868771 | None:intergenic | 30.0% |
| CACAAATACATAGAGTGATA+AGG | - | chr2_3:11868870-11868889 | None:intergenic | 30.0% | |
| TTCACACTAAACATATGTGA+CGG | - | chr2_3:11868894-11868913 | None:intergenic | 30.0% | |
| ! | GAAACTTGTTCTTCTTTCTT+TGG | - | chr2_3:11869054-11869073 | None:intergenic | 30.0% |
| ATCTAACAAGGAACCTAAAT+TGG | + | chr2_3:11869779-11869798 | Msa0278770:intron | 30.0% | |
| TCTAACAAGGAACCTAAATT+GGG | + | chr2_3:11869780-11869799 | Msa0278770:intron | 30.0% | |
| AGTTGCATATTAATGGTAAC+TGG | - | chr2_3:11869943-11869962 | None:intergenic | 30.0% | |
| AATATTGCTTCACAGTTCAA+TGG | - | chr2_3:11870117-11870136 | None:intergenic | 30.0% | |
| ! | TATTTTCATCGCTGAATGAT+TGG | + | chr2_3:11870133-11870152 | Msa0278770:intron | 30.0% |
| ! | TGGTTCAGTTTAAAATACAC+CGG | + | chr2_3:11870153-11870172 | Msa0278770:intron | 30.0% |
| GCTAGAACTTCTTATGAAAA+AGG | - | chr2_3:11870527-11870546 | None:intergenic | 30.0% | |
| CTTCCCAAAATAATAAAGAC+TGG | + | chr2_3:11870627-11870646 | Msa0278770:CDS | 30.0% | |
| ! | TTATTAGTTTCTCCCATAGT+TGG | + | chr2_3:11870794-11870813 | Msa0278770:intron | 30.0% |
| ! | GTGTGATTTGTATCATTGAT+AGG | + | chr2_3:11870965-11870984 | Msa0278770:intron | 30.0% |
| !!! | ATCCATACTGATTTTGAGAA+AGG | + | chr2_3:11871368-11871387 | Msa0278770:CDS | 30.0% |
| ATCCTTTCTCAAAATCAGTA+TGG | - | chr2_3:11871373-11871392 | None:intergenic | 30.0% | |
| CATTTCTAAATTTGTCGTGA+AGG | - | chr2_3:11871616-11871635 | None:intergenic | 30.0% | |
| TCAATTAGATTCTTATCCGA+CGG | - | chr2_3:11871691-11871710 | None:intergenic | 30.0% | |
| ! | ACATATTTTCATAAGGGGAA+TGG | - | chr2_3:11871834-11871853 | None:intergenic | 30.0% |
| TATATATACACCACTGATCT+AGG | + | chr2_3:11871954-11871973 | Msa0278770:CDS | 30.0% | |
| ! | TTTGATGATCTAAAGGAACT+TGG | + | chr2_3:11872008-11872027 | Msa0278770:CDS | 30.0% |
| ! | AAAATTTGAGACAACACTTC+AGG | + | chr2_3:11872133-11872152 | Msa0278770:intron | 30.0% |
| ATACAACAAAGAGTGAGATA+TGG | - | chr2_3:11872250-11872269 | None:intergenic | 30.0% | |
| ATTGTTTATTATTAGGCTGC+TGG | + | chr2_3:11872268-11872287 | Msa0278770:intron | 30.0% | |
| GCTGGAAAATATAAACAAGA+AGG | + | chr2_3:11872286-11872305 | Msa0278770:CDS | 30.0% | |
| ATAATGCTCAAAAACATGGT+AGG | - | chr2_3:11872447-11872466 | None:intergenic | 30.0% | |
| AGAGTAAATTTGATGTGAAC+TGG | + | chr2_3:11872671-11872690 | Msa0278770:three_prime_UTR | 30.0% | |
| GAGTAAATTTGATGTGAACT+GGG | + | chr2_3:11872672-11872691 | Msa0278770:three_prime_UTR | 30.0% | |
| AGAATACGATTCCAATCTTG+AGG | - | chr2_3:11864650-11864669 | None:intergenic | 35.0% | |
| ! | AAGCTATCTTTGAGAGCTTA+TGG | - | chr2_3:11865145-11865164 | None:intergenic | 35.0% |
| !! | TATAAACCAAAGGCCTTGTT+TGG | - | chr2_3:11865277-11865296 | None:intergenic | 35.0% |
| ! | AAACAAGGCCTTTGGTTTAT+AGG | + | chr2_3:11865276-11865295 | Msa0278770:intron | 35.0% |
| TTTATAGGCCTGTTTGGATA+TGG | + | chr2_3:11865291-11865310 | Msa0278770:intron | 35.0% | |
| TATTACTCTGTTGTTCAGGT+TGG | + | chr2_3:11865602-11865621 | Msa0278770:intron | 35.0% | |
| AGTGTAGACTTTCCAACATT+TGG | - | chr2_3:11865632-11865651 | None:intergenic | 35.0% | |
| TTAGGCTCAATAGTGCAAAA+GGG | - | chr2_3:11865698-11865717 | None:intergenic | 35.0% | |
| ATTAGGCTCAATAGTGCAAA+AGG | - | chr2_3:11865699-11865718 | None:intergenic | 35.0% | |
| TATTGAGCCTAATGAAGCAA+GGG | + | chr2_3:11865706-11865725 | Msa0278770:CDS | 35.0% | |
| !! | AGATTACAAACCTCGCTTTT+TGG | - | chr2_3:11865779-11865798 | None:intergenic | 35.0% |
| AAAAAGCGAGGTTTGTAATC+TGG | + | chr2_3:11865778-11865797 | Msa0278770:intron | 35.0% | |
| ATATATCCTGACGTGTTTGT+TGG | + | chr2_3:11865900-11865919 | Msa0278770:intron | 35.0% | |
| TTAGAAATCCATGACATAGC+TGG | + | chr2_3:11865949-11865968 | Msa0278770:CDS | 35.0% | |
| GATCAAACAACAATAACGGT+TGG | - | chr2_3:11866384-11866403 | None:intergenic | 35.0% | |
| !! | AAGTACATGGTCTTTTAAGG+GGG | + | chr2_3:11866432-11866451 | Msa0278770:intron | 35.0% |
| !!! | CTATGTGTGTTTTAACGCTA+AGG | + | chr2_3:11866532-11866551 | Msa0278770:intron | 35.0% |
| ATCCTATGATGTTACGCAAA+GGG | - | chr2_3:11866692-11866711 | None:intergenic | 35.0% | |
| TATCCTATGATGTTACGCAA+AGG | - | chr2_3:11866693-11866712 | None:intergenic | 35.0% | |
| ! | ATCTTGAAAAGAGCATGAAG+AGG | + | chr2_3:11866740-11866759 | Msa0278770:CDS | 35.0% |
| ! | TTTTTACATTGACCCAAGTC+GGG | - | chr2_3:11866931-11866950 | None:intergenic | 35.0% |
| CTTGGGACCGAAAATTATAA+AGG | - | chr2_3:11867001-11867020 | None:intergenic | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | - | chr2_3:11867137-11867156 | None:intergenic | 35.0% | |
| TTTAACTGTACTATGGCCAT+TGG | + | chr2_3:11867352-11867371 | Msa0278770:intron | 35.0% | |
| TTTCTTCGTATGATTCTCTC+TGG | + | chr2_3:11867473-11867492 | Msa0278770:intron | 35.0% | |
| ATGCATTGCATTCTCTCATA+AGG | + | chr2_3:11867662-11867681 | Msa0278770:intron | 35.0% | |
| CTTAAACACGAGAAGAGAAA+AGG | - | chr2_3:11867715-11867734 | None:intergenic | 35.0% | |
| TGATATTTCTCAAAGTTGGC+TGG | + | chr2_3:11868144-11868163 | Msa0278770:intron | 35.0% | |
| ! | ATATGGTGGAAAATAGGCTT+AGG | + | chr2_3:11868329-11868348 | Msa0278770:intron | 35.0% |
| AAAATAGGCTTAGGTGGTTT+GGG | + | chr2_3:11868338-11868357 | Msa0278770:intron | 35.0% | |
| ! | AGTTTTTCTAGGTTTTCCTC+TGG | - | chr2_3:11868436-11868455 | None:intergenic | 35.0% |
| ! | GAAAAAGGTATGCGAATGAA+TGG | - | chr2_3:11868720-11868739 | None:intergenic | 35.0% |
| CTAGAACATGAAATGGCAAT+TGG | - | chr2_3:11868832-11868851 | None:intergenic | 35.0% | |
| TTCTTCCCAAAATTCACACA+TGG | + | chr2_3:11869071-11869090 | Msa0278770:CDS | 35.0% | |
| ! | ACGTACCATGTGTGAATTTT+GGG | - | chr2_3:11869079-11869098 | None:intergenic | 35.0% |
| ! | TACGTACCATGTGTGAATTT+TGG | - | chr2_3:11869080-11869099 | None:intergenic | 35.0% |
| !!! | TCCGTGTCATTTTTTTCTTC+TGG | + | chr2_3:11869115-11869134 | Msa0278770:intron | 35.0% |
| CCCAGAAGAAAAAAATGACA+CGG | - | chr2_3:11869119-11869138 | None:intergenic | 35.0% | |
| !!! | CCGTGTCATTTTTTTCTTCT+GGG | + | chr2_3:11869116-11869135 | Msa0278770:intron | 35.0% |
| TGGAGAACAAATGTGACTAA+TGG | - | chr2_3:11869411-11869430 | None:intergenic | 35.0% | |
| ATTAGTCACATTTGTTCTCC+AGG | + | chr2_3:11869410-11869429 | Msa0278770:intron | 35.0% | |
| TTAGTCACATTTGTTCTCCA+GGG | + | chr2_3:11869411-11869430 | Msa0278770:intron | 35.0% | |
| TGAGAATAACAGAGTTTCAC+TGG | - | chr2_3:11869841-11869860 | None:intergenic | 35.0% | |
| ATCGTATGAATCAGACACAT+TGG | + | chr2_3:11869903-11869922 | Msa0278770:intron | 35.0% | |
| !! | ATTTATTTCTGGTTCGACCA+TGG | + | chr2_3:11870075-11870094 | Msa0278770:intron | 35.0% |
| ! | GGTTCAGTTTAAAATACACC+GGG | + | chr2_3:11870154-11870173 | Msa0278770:intron | 35.0% |
| ! | ATCCCAAATTCATTTTCCCT+TGG | + | chr2_3:11870270-11870289 | Msa0278770:intron | 35.0% |
| GACCAAGGGAAAATGAATTT+GGG | - | chr2_3:11870275-11870294 | None:intergenic | 35.0% | |
| CTTTCAAATTTGGATGGCAA+TGG | - | chr2_3:11870299-11870318 | None:intergenic | 35.0% | |
| !!! | CTCATTTACTTTTTCACAGC+AGG | + | chr2_3:11870666-11870685 | Msa0278770:CDS | 35.0% |
| ATGTGGATATTTACCTCATC+AGG | - | chr2_3:11870693-11870712 | None:intergenic | 35.0% | |
| AAGACAACTAACAGTGTGAA+AGG | - | chr2_3:11870720-11870739 | None:intergenic | 35.0% | |
| ! | CGTAAGATTTTGCCAACTAT+GGG | - | chr2_3:11870809-11870828 | None:intergenic | 35.0% |
| ! | TCGTAAGATTTTGCCAACTA+TGG | - | chr2_3:11870810-11870829 | None:intergenic | 35.0% |
| ! | ACGGTTCTATACTTGGTAAT+GGG | + | chr2_3:11870847-11870866 | Msa0278770:intron | 35.0% |
| TGTGCTTCTTGTCACATATA+TGG | + | chr2_3:11871030-11871049 | Msa0278770:intron | 35.0% | |
| AACACATCAGAACAAAGGAA+GGG | - | chr2_3:11871143-11871162 | None:intergenic | 35.0% | |
| AAAGGAACACATCAGAACAA+AGG | - | chr2_3:11871148-11871167 | None:intergenic | 35.0% | |
| !!! | GTTTGGTTTTTCCATGTCTA+AGG | + | chr2_3:11871233-11871252 | Msa0278770:intron | 35.0% |
| GGCTATTATTTGCTTCTTTC+AGG | + | chr2_3:11871292-11871311 | Msa0278770:intron | 35.0% | |
| GAAAGGATTTATTTGTGCTG+AGG | + | chr2_3:11871385-11871404 | Msa0278770:CDS | 35.0% | |
| CTAAATTTGTCGTGAAGGAA+AGG | - | chr2_3:11871611-11871630 | None:intergenic | 35.0% | |
| GACGGTAATTCATATTGCAA+GGG | - | chr2_3:11871673-11871692 | None:intergenic | 35.0% | |
| CTTGCAATATGAATTACCGT+CGG | + | chr2_3:11871672-11871691 | Msa0278770:intron | 35.0% | |
| ACAATCACTGTTACTCATTG+TGG | + | chr2_3:11871748-11871767 | Msa0278770:intron | 35.0% | |
| CTGACTTCTTAGCTTAATTG+TGG | + | chr2_3:11872157-11872176 | Msa0278770:intron | 35.0% | |
| ACAAAGAGTGAGATATGGTT+AGG | - | chr2_3:11872245-11872264 | None:intergenic | 35.0% | |
| ACAAGAAGGGAAAACTTATG+TGG | + | chr2_3:11872300-11872319 | Msa0278770:CDS | 35.0% | |
| AAAACTTATGTGGTCCAAGA+TGG | + | chr2_3:11872310-11872329 | Msa0278770:CDS | 35.0% | |
| !! | TTCAAGTTCAATGTTTCTGG+TGG | + | chr2_3:11872346-11872365 | Msa0278770:CDS | 35.0% |
| AACCAGAAATTCACCTTTAG+TGG | + | chr2_3:11872382-11872401 | Msa0278770:three_prime_UTR | 35.0% | |
| !! | TTTCCGTGAACTGTTTTTCA+TGG | + | chr2_3:11872416-11872435 | Msa0278770:three_prime_UTR | 35.0% |
| TGTCCATGAAAAACAGTTCA+CGG | - | chr2_3:11872422-11872441 | None:intergenic | 35.0% | |
| TAACACGCAATACCTCAATA+GGG | - | chr2_3:11872624-11872643 | None:intergenic | 35.0% | |
| !!! | GATGTGAACTGGGAATTTTT+TGG | + | chr2_3:11872682-11872701 | Msa0278770:three_prime_UTR | 35.0% |
| ! | ATCTGAAACTCACTCGTGTA+GGG | - | chr2_3:11864496-11864515 | None:intergenic | 40.0% |
| ! | AATCTGAAACTCACTCGTGT+AGG | - | chr2_3:11864497-11864516 | None:intergenic | 40.0% |
| TTCTCTTCTCACCTCAAGAT+TGG | + | chr2_3:11864636-11864655 | Msa0278770:CDS | 40.0% | |
| TTACCGACGTAATCACTTTG+AGG | + | chr2_3:11864904-11864923 | Msa0278770:intron | 40.0% | |
| ! | AAAGGGCATAAGCAAAGAGA+AGG | + | chr2_3:11865059-11865078 | Msa0278770:intron | 40.0% |
| AGAAGGTTTGTGAGAGCTTA+TGG | + | chr2_3:11865076-11865095 | Msa0278770:intron | 40.0% | |
| GTTTATCCAAACAAGGCCTT+TGG | + | chr2_3:11865268-11865287 | Msa0278770:intron | 40.0% | |
| CAAACAGGCCTATAAACCAA+AGG | - | chr2_3:11865287-11865306 | None:intergenic | 40.0% | |
| ! | CTTTGGTTTATAGGCCTGTT+TGG | + | chr2_3:11865285-11865304 | Msa0278770:intron | 40.0% |
| TAGGCTCAATAGTGCAAAAG+GGG | - | chr2_3:11865697-11865716 | None:intergenic | 40.0% | |
| CTATTGAGCCTAATGAAGCA+AGG | + | chr2_3:11865705-11865724 | Msa0278770:CDS | 40.0% | |
| ACATTGACCCTTGCTTCATT+AGG | - | chr2_3:11865716-11865735 | None:intergenic | 40.0% | |
| ATTGTTCAAGCCAAAAAGCG+AGG | + | chr2_3:11865766-11865785 | Msa0278770:CDS | 40.0% | |
| CAAAAGAGATACACCAGCAA+TGG | - | chr2_3:11865810-11865829 | None:intergenic | 40.0% | |
| AATCCATGACATAGCTGGAT+TGG | + | chr2_3:11865954-11865973 | Msa0278770:CDS | 40.0% | |
| TGCAAAAGTGGTGTGGAAAT+AGG | - | chr2_3:11866081-11866100 | None:intergenic | 40.0% | |
| ATCATGATGCAAAAGTGGTG+TGG | - | chr2_3:11866088-11866107 | None:intergenic | 40.0% | |
| TTGTTTGGTAGGTGCATTTG+AGG | + | chr2_3:11866157-11866176 | Msa0278770:intron | 40.0% | |
| TCGTCTACGTGGATAATATC+TGG | - | chr2_3:11866185-11866204 | None:intergenic | 40.0% | |
| TAACCTCTAAATCCCTCACA+GGG | - | chr2_3:11866217-11866236 | None:intergenic | 40.0% | |
| ATAACCTCTAAATCCCTCAC+AGG | - | chr2_3:11866218-11866237 | None:intergenic | 40.0% | |
| AACAACAATAACGGTTGGCA+AGG | - | chr2_3:11866379-11866398 | None:intergenic | 40.0% | |
| GGGCTTTCTTAACAAACATG+TGG | + | chr2_3:11866452-11866471 | Msa0278770:intron | 40.0% | |
| !!! | TGTGTGTTTTAACGCTAAGG+AGG | + | chr2_3:11866535-11866554 | Msa0278770:intron | 40.0% |
| ATGATGTTACGCAAAGGGAA+AGG | - | chr2_3:11866687-11866706 | None:intergenic | 40.0% | |
| TTCCCTTTGCGTAACATCAT+AGG | + | chr2_3:11866687-11866706 | Msa0278770:intron | 40.0% | |
| CGAGCTTGAATGTTGTCAAA+AGG | + | chr2_3:11866786-11866805 | Msa0278770:CDS | 40.0% | |
| CTAATTTACGTTGAGTCCCA+AGG | + | chr2_3:11867159-11867178 | Msa0278770:intron | 40.0% | |
| GGAATTCAAAATCTCGACCT+CGG | - | chr2_3:11867871-11867890 | None:intergenic | 40.0% | |
| TACCAAGTATACAACAGGCT+TGG | - | chr2_3:11867910-11867929 | None:intergenic | 40.0% | |
| !! | CGTTGGTAACGCGAAATAAT+TGG | - | chr2_3:11868028-11868047 | None:intergenic | 40.0% |
| ! | GTAGCACTGTTAAGTATCGT+TGG | - | chr2_3:11868045-11868064 | None:intergenic | 40.0% |
| TTCTCAAAGTTGGCTGGATA+TGG | + | chr2_3:11868150-11868169 | Msa0278770:intron | 40.0% | |
| GAAAATAGGCTTAGGTGGTT+TGG | + | chr2_3:11868337-11868356 | Msa0278770:intron | 40.0% | |
| CTCTCTACTACAGAATCTAC+AGG | - | chr2_3:11868379-11868398 | None:intergenic | 40.0% | |
| GTAGTAGAGAGTAGATCAGA+TGG | + | chr2_3:11868388-11868407 | Msa0278770:intron | 40.0% | |
| TAGAGAGTAGATCAGATGGA+GGG | + | chr2_3:11868392-11868411 | Msa0278770:intron | 40.0% | |
| CTTATCCCACTAAGTGAGTT+CGG | - | chr2_3:11868556-11868575 | None:intergenic | 40.0% | |
| ! | ATAAGGCTTGGTTGTTGTTG+TGG | + | chr2_3:11868571-11868590 | Msa0278770:intron | 40.0% |
| GAATGAATGGTTCATATCCC+AGG | - | chr2_3:11868707-11868726 | None:intergenic | 40.0% | |
| ! | CGCATACCTTTTTCTTGTGA+AGG | + | chr2_3:11868726-11868745 | Msa0278770:intron | 40.0% |
| ATGTGGCCTTCACAAGAAAA+AGG | - | chr2_3:11868735-11868754 | None:intergenic | 40.0% | |
| ATACTTCCATCCAAACACGT+CGG | + | chr2_3:11868762-11868781 | Msa0278770:intron | 40.0% | |
| CTTATATATGCCGACGTGTT+TGG | - | chr2_3:11868775-11868794 | None:intergenic | 40.0% | |
| GGAATGAGACAAAGTCTGAA+TGG | - | chr2_3:11869144-11869163 | None:intergenic | 40.0% | |
| TTCAGACTTTGTCTCATTCC+TGG | + | chr2_3:11869144-11869163 | Msa0278770:intron | 40.0% | |
| TGACAGGACTAACCCAATTT+AGG | - | chr2_3:11869795-11869814 | None:intergenic | 40.0% | |
| !! | TAAATTGGGTTAGTCCTGTC+AGG | + | chr2_3:11869794-11869813 | Msa0278770:intron | 40.0% |
| GTCTGACTATAATCACACCA+TGG | - | chr2_3:11870095-11870114 | None:intergenic | 40.0% | |
| CGACCAAGGGAAAATGAATT+TGG | - | chr2_3:11870276-11870295 | None:intergenic | 40.0% | |
| CTGCGACTTTCAAATTTGGA+TGG | - | chr2_3:11870305-11870324 | None:intergenic | 40.0% | |
| ACGTCTGCGACTTTCAAATT+TGG | - | chr2_3:11870309-11870328 | None:intergenic | 40.0% | |
| ACAGTGTGAAAGGAGATATG+TGG | - | chr2_3:11870710-11870729 | None:intergenic | 40.0% | |
| GTTATGAATGTTCACGGTCT+TGG | + | chr2_3:11870747-11870766 | Msa0278770:intron | 40.0% | |
| GAAATGCACGGTTCTATACT+TGG | + | chr2_3:11870840-11870859 | Msa0278770:intron | 40.0% | |
| CACGGTTCTATACTTGGTAA+TGG | + | chr2_3:11870846-11870865 | Msa0278770:intron | 40.0% | |
| ATGAAAAGAAACTGAAGGGC+TGG | + | chr2_3:11871080-11871099 | Msa0278770:intron | 40.0% | |
| ACACATCAGAACAAAGGAAG+GGG | - | chr2_3:11871142-11871161 | None:intergenic | 40.0% | |
| GAACACATCAGAACAAAGGA+AGG | - | chr2_3:11871144-11871163 | None:intergenic | 40.0% | |
| CAAAAGCTGTACCTTAGACA+TGG | - | chr2_3:11871247-11871266 | None:intergenic | 40.0% | |
| !! | CATGTCTAAGGTACAGCTTT+TGG | + | chr2_3:11871245-11871264 | Msa0278770:intron | 40.0% |
| !! | GCTTCTTTCAGGTTAAGTGT+TGG | + | chr2_3:11871303-11871322 | Msa0278770:intron | 40.0% |
| GCAAATTAGACGCCTAACAA+AGG | + | chr2_3:11871325-11871344 | Msa0278770:CDS | 40.0% | |
| CGACGGTAATTCATATTGCA+AGG | - | chr2_3:11871674-11871693 | None:intergenic | 40.0% | |
| CACTGTTACTCATTGTGGTT+TGG | + | chr2_3:11871753-11871772 | Msa0278770:intron | 40.0% | |
| ! | TATTTTCTTGGCGGCCTTTA+TGG | + | chr2_3:11871803-11871822 | Msa0278770:intron | 40.0% |
| ! | TGCTTTGCAAATGTCGTTTC+AGG | + | chr2_3:11871977-11871996 | Msa0278770:CDS | 40.0% |
| !! | AAGTTCAATGTTTCTGGTGG+AGG | + | chr2_3:11872349-11872368 | Msa0278770:CDS | 40.0% |
| !! | AGTTCAATGTTTCTGGTGGA+GGG | + | chr2_3:11872350-11872369 | Msa0278770:CDS | 40.0% |
| TGCCACTAAAGGTGAATTTC+TGG | - | chr2_3:11872387-11872406 | None:intergenic | 40.0% | |
| CTAACACGCAATACCTCAAT+AGG | - | chr2_3:11872625-11872644 | None:intergenic | 40.0% | |
| !!! | CTCGTGTAGGGTTTTGTTGT+AGG | - | chr2_3:11864484-11864503 | None:intergenic | 45.0% |
| !! | GGATTTAGGAGGCATTGTTG+CGG | - | chr2_3:11864571-11864590 | None:intergenic | 45.0% |
| !! | TTCGATTTGGCGGATTTAGG+AGG | - | chr2_3:11864582-11864601 | None:intergenic | 45.0% |
| TCCTAAATCCGCCAAATCGA+AGG | + | chr2_3:11864581-11864600 | Msa0278770:CDS | 45.0% | |
| !! | TCCTTCGATTTGGCGGATTT+AGG | - | chr2_3:11864585-11864604 | None:intergenic | 45.0% |
| AACTGGAGCTTCCTTCGATT+TGG | - | chr2_3:11864595-11864614 | None:intergenic | 45.0% | |
| GAAGAGAAACGACCAAGGAT+GGG | - | chr2_3:11864624-11864643 | None:intergenic | 45.0% | |
| AGAAGAGAAACGACCAAGGA+TGG | - | chr2_3:11864625-11864644 | None:intergenic | 45.0% | |
| GCTCCTCAAAGTGATTACGT+CGG | - | chr2_3:11864910-11864929 | None:intergenic | 45.0% | |
| !! | CAGGTTGGTTTGCCAAATGT+TGG | + | chr2_3:11865617-11865636 | Msa0278770:intron | 45.0% |
| ! | AATCTGGCTCATACCATTGC+TGG | + | chr2_3:11865794-11865813 | Msa0278770:intron | 45.0% |
| ACAGATCCAACAAACACGTC+AGG | - | chr2_3:11865909-11865928 | None:intergenic | 45.0% | |
| GAACCAATCCAGCTATGTCA+TGG | - | chr2_3:11865960-11865979 | None:intergenic | 45.0% | |
| GAAAAATGCCATCAACAGCC+CGG | - | chr2_3:11866032-11866051 | None:intergenic | 45.0% | |
| TACTGAAGAGTTACGGCTGA+AGG | + | chr2_3:11866238-11866257 | Msa0278770:CDS | 45.0% | |
| AACAATAACGGTTGGCAAGG+AGG | - | chr2_3:11866376-11866395 | None:intergenic | 45.0% | |
| ATTACGTTGCAGCGAACCTT+GGG | - | chr2_3:11867178-11867197 | None:intergenic | 45.0% | |
| AATTACGTTGCAGCGAACCT+TGG | - | chr2_3:11867179-11867198 | None:intergenic | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | + | chr2_3:11867184-11867203 | Msa0278770:intron | 45.0% | |
| ACAAGACAAAAGGTGGCCAA+TGG | - | chr2_3:11867371-11867390 | None:intergenic | 45.0% | |
| GTCAAATCAATTGCCGTCAC+TGG | + | chr2_3:11867580-11867599 | Msa0278770:intron | 45.0% | |
| ! | TCAGGTCAAGGCATTCATTG+AGG | + | chr2_3:11867809-11867828 | Msa0278770:intron | 45.0% |
| ! | GTCAAGGCATTCATTGAGGA+GGG | + | chr2_3:11867813-11867832 | Msa0278770:CDS | 45.0% |
| AGGGAAAAGATGTACGCCTA+GGG | + | chr2_3:11867832-11867851 | Msa0278770:CDS | 45.0% | |
| TGCCAAGCCTGTTGTATACT+TGG | + | chr2_3:11867905-11867924 | Msa0278770:CDS | 45.0% | |
| AAAGTTGGCTGGATATGGCT+CGG | + | chr2_3:11868155-11868174 | Msa0278770:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGTT+GGG | + | chr2_3:11868287-11868306 | Msa0278770:intron | 45.0% | |
| TGGTGGAAAATAGGCTTAGG+TGG | + | chr2_3:11868332-11868351 | Msa0278770:intron | 45.0% | |
| GTAGAGAGTAGATCAGATGG+AGG | + | chr2_3:11868391-11868410 | Msa0278770:intron | 45.0% | |
| AGAGAGTAGATCAGATGGAG+GGG | + | chr2_3:11868393-11868412 | Msa0278770:intron | 45.0% | |
| !! | TTTCCTCTGGCTCTAGTGAT+CGG | - | chr2_3:11868423-11868442 | None:intergenic | 45.0% |
| ACTAAGTGAGTTCGGCTACA+TGG | - | chr2_3:11868548-11868567 | None:intergenic | 45.0% | |
| ATGTAGCCGAACTCACTTAG+TGG | + | chr2_3:11868547-11868566 | Msa0278770:intron | 45.0% | |
| TGTAGCCGAACTCACTTAGT+GGG | + | chr2_3:11868548-11868567 | Msa0278770:intron | 45.0% | |
| CGAACTCACTTAGTGGGATA+AGG | + | chr2_3:11868554-11868573 | Msa0278770:intron | 45.0% | |
| TCACTTAGTGGGATAAGGCT+TGG | + | chr2_3:11868559-11868578 | Msa0278770:intron | 45.0% | |
| TGTGCAGTTGCAAATGCCTT+TGG | - | chr2_3:11868637-11868656 | None:intergenic | 45.0% | |
| AATGGTTCATATCCCAGGCT+GGG | - | chr2_3:11868702-11868721 | None:intergenic | 45.0% | |
| TATATGCCGACGTGTTTGGA+TGG | - | chr2_3:11868771-11868790 | None:intergenic | 45.0% | |
| CTACCTCTGTGCGAATATGA+AGG | + | chr2_3:11869167-11869186 | Msa0278770:intron | 45.0% | |
| CATCCTTCATATTCGCACAG+AGG | - | chr2_3:11869173-11869192 | None:intergenic | 45.0% | |
| TTCAGATATGCCTCCTGATG+AGG | + | chr2_3:11869492-11869511 | Msa0278770:CDS | 45.0% | |
| TCAGTCAGACGGATCTAACA+AGG | + | chr2_3:11869767-11869786 | Msa0278770:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2_3:11868560-11868579 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2_3:11868561-11868580 | None:intergenic | 45.0% |
| ! | GGATAAGGCTTGGTTGTTGT+GGG | + | chr2_3:11868569-11868588 | Msa0278770:intron | 45.0% |
| CACATCAGAACAAAGGAAGG+GGG | - | chr2_3:11871141-11871160 | None:intergenic | 45.0% | |
| TCTGATGTGTTCCTTTGTCG+AGG | + | chr2_3:11871152-11871171 | Msa0278770:intron | 45.0% | |
| ! | TTGCAAAGCACCTAGATCAG+TGG | - | chr2_3:11871967-11871986 | None:intergenic | 45.0% |
| TGGAAGTGAGTCAGCTGTAA+AGG | + | chr2_3:11872028-11872047 | Msa0278770:CDS | 45.0% | |
| AAGCAGACAACTGCCACTAA+AGG | - | chr2_3:11872398-11872417 | None:intergenic | 45.0% | |
| !! | TGGTGAGTTGATCCCTATTG+AGG | + | chr2_3:11872609-11872628 | Msa0278770:three_prime_UTR | 45.0% |
| !!! | ATTATTTTATCAAAATTTAA+AGG | + | chr2_3:11866612-11866631 | Msa0278770:intron | 5.0% |
| !!! | ATAATAAGATAATAATTTTT+TGG | + | chr2_3:11866969-11866988 | Msa0278770:intron | 5.0% |
| !!! | TAATAAGATAATAATTTTTT+GGG | + | chr2_3:11866970-11866989 | Msa0278770:intron | 5.0% |
| CGGCGGAGAGAGATTGAAAT+CGG | - | chr2_3:11864551-11864570 | None:intergenic | 50.0% | |
| !! | TTTAGGAGGCATTGTTGCGG+CGG | - | chr2_3:11864568-11864587 | None:intergenic | 50.0% |
| !! | TGGAGCTTCCTTCGATTTGG+CGG | - | chr2_3:11864592-11864611 | None:intergenic | 50.0% |
| GGTGAGAAGAGAAACGACCA+AGG | - | chr2_3:11864629-11864648 | None:intergenic | 50.0% | |
| CAAAAGGGGAAGTTCTCAGC+AGG | - | chr2_3:11865683-11865702 | None:intergenic | 50.0% | |
| !! | GACATAGCTGGATTGGTTCG+AGG | + | chr2_3:11865961-11865980 | Msa0278770:CDS | 50.0% |
| !! | ATTGGTTCGAGGTGCTCATG+AGG | + | chr2_3:11865972-11865991 | Msa0278770:CDS | 50.0% |
| ! | TTGGTTCGAGGTGCTCATGA+GGG | + | chr2_3:11865973-11865992 | Msa0278770:CDS | 50.0% |
| AGTGGTGTGGAAATAGGAGC+AGG | - | chr2_3:11866075-11866094 | None:intergenic | 50.0% | |
| TGACCCTGTGAGGGATTTAG+AGG | + | chr2_3:11866211-11866230 | Msa0278770:CDS | 50.0% | |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr2_3:11866915-11866934 | Msa0278770:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr2_3:11866916-11866935 | Msa0278770:intron | 50.0% | |
| ! | GGTCAAGGCATTCATTGAGG+AGG | + | chr2_3:11867812-11867831 | Msa0278770:intron | 50.0% |
| GAGGGAAAAGATGTACGCCT+AGG | + | chr2_3:11867831-11867850 | Msa0278770:CDS | 50.0% | |
| GGGAAAAGATGTACGCCTAG+GGG | + | chr2_3:11867833-11867852 | Msa0278770:CDS | 50.0% | |
| AAGATGTACGCCTAGGGGAT+TGG | + | chr2_3:11867838-11867857 | Msa0278770:CDS | 50.0% | |
| CTTGGCAGTAAGCAACTGGA+AGG | - | chr2_3:11867892-11867911 | None:intergenic | 50.0% | |
| AAGTTGGCTGGATATGGCTC+GGG | + | chr2_3:11868156-11868175 | Msa0278770:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGT+TGG | + | chr2_3:11868286-11868305 | Msa0278770:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGTTG+GGG | + | chr2_3:11868288-11868307 | Msa0278770:intron | 50.0% | |
| TCATTTCCTCTTTCCCAGCC+TGG | + | chr2_3:11868686-11868705 | Msa0278770:intron | 50.0% | |
| CATTTCCTCTTTCCCAGCCT+GGG | + | chr2_3:11868687-11868706 | Msa0278770:intron | 50.0% | |
| GAATGGTTCATATCCCAGGC+TGG | - | chr2_3:11868703-11868722 | None:intergenic | 50.0% | |
| ATATTCGCACAGAGGTAGCC+AGG | - | chr2_3:11869165-11869184 | None:intergenic | 50.0% | |
| ACATTTGTTCTCCAGGGTCC+AGG | + | chr2_3:11869417-11869436 | Msa0278770:intron | 50.0% | |
| TTTGTCCACCACCATGTTCC+TGG | - | chr2_3:11869438-11869457 | None:intergenic | 50.0% | |
| AGATATGCCTCCTGATGAGG+CGG | + | chr2_3:11869495-11869514 | Msa0278770:CDS | 50.0% | |
| TATTTAGCCGCCTCATCAGG+AGG | - | chr2_3:11869505-11869524 | None:intergenic | 50.0% | |
| CAGTATTTAGCCGCCTCATC+AGG | - | chr2_3:11869508-11869527 | None:intergenic | 50.0% | |
| TGAGGCGGCTAAATACTGTG+AGG | + | chr2_3:11869510-11869529 | Msa0278770:CDS | 50.0% | |
| GTGAGGCGAACAACGTTCAA+AGG | + | chr2_3:11869527-11869546 | Msa0278770:CDS | 50.0% | |
| GTTAGATCCGTCTGACTGAC+TGG | - | chr2_3:11869766-11869785 | None:intergenic | 50.0% | |
| !! | TTTTTCGACCGGTACCTGAC+AGG | - | chr2_3:11869811-11869830 | None:intergenic | 50.0% |
| !! | CTGGTTCGCAGTTTTTCGAC+CGG | - | chr2_3:11869822-11869841 | None:intergenic | 50.0% |
| AGCTACTTAGCTCAGACACC+CGG | - | chr2_3:11870175-11870194 | None:intergenic | 50.0% | |
| AAGTAGCTGACCCCACTTAG+TGG | + | chr2_3:11870187-11870206 | Msa0278770:intron | 50.0% | |
| AGTAGCTGACCCCACTTAGT+GGG | + | chr2_3:11870188-11870207 | Msa0278770:intron | 50.0% | |
| TGACCCCACTTAGTGGGATA+AGG | + | chr2_3:11870194-11870213 | Msa0278770:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr2_3:11868562-11868581 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr2_3:11870199-11870218 | Msa0278770:intron | 50.0% | |
| ! | GGGATAAGGCTTGGTTGTTG+TGG | + | chr2_3:11868568-11868587 | Msa0278770:intron | 50.0% |
| TTTCACAGCAGGACCTGATG+AGG | + | chr2_3:11870677-11870696 | Msa0278770:CDS | 50.0% | |
| GTTCCTTTGTCGAGGCTTCA+TGG | + | chr2_3:11871160-11871179 | Msa0278770:intron | 50.0% | |
| CAGCTTGAGGAGCCTTTGTT+AGG | - | chr2_3:11871340-11871359 | None:intergenic | 50.0% | |
| GGGGAATGGCTATGCCATAA+AGG | - | chr2_3:11871820-11871839 | None:intergenic | 50.0% | |
| CCAAGGATGGGTCGTTCAAC+TGG | - | chr2_3:11864612-11864631 | None:intergenic | 55.0% | |
| CCAGTTGAACGACCCATCCT+TGG | + | chr2_3:11864609-11864628 | Msa0278770:CDS | 55.0% | |
| !! | TCCCTGACGAGCGTTTTGAG+TGG | + | chr2_3:11865735-11865754 | Msa0278770:CDS | 55.0% |
| GCCACTCAAAACGCTCGTCA+GGG | - | chr2_3:11865739-11865758 | None:intergenic | 55.0% | |
| AGCCACTCAAAACGCTCGTC+AGG | - | chr2_3:11865740-11865759 | None:intergenic | 55.0% | |
| ! | TGGTTCGAGGTGCTCATGAG+GGG | + | chr2_3:11865974-11865993 | Msa0278770:CDS | 55.0% |
| TCTCACATCCGGGCTGTTGA+TGG | + | chr2_3:11866021-11866040 | Msa0278770:CDS | 55.0% | |
| GGTCAACAGTGTCGTCTACG+TGG | - | chr2_3:11866196-11866215 | None:intergenic | 55.0% | |
| ACGACACTGTTGACCCTGTG+AGG | + | chr2_3:11866201-11866220 | Msa0278770:CDS | 55.0% | |
| CGACACTGTTGACCCTGTGA+GGG | + | chr2_3:11866202-11866221 | Msa0278770:CDS | 55.0% | |
| ACATTGACCCAAGTCGGGAC+CGG | - | chr2_3:11866926-11866945 | None:intergenic | 55.0% | |
| CAGGCTTGGCAGTAAGCAAC+TGG | - | chr2_3:11867896-11867915 | None:intergenic | 55.0% | |
| AGTCCGATCACTAGAGCCAG+AGG | + | chr2_3:11868417-11868436 | Msa0278770:intron | 55.0% | |
| CATATCCCAGGCTGGGAAAG+AGG | - | chr2_3:11868695-11868714 | None:intergenic | 55.0% | |
| TTCTCCAGGGTCCAGGAACA+TGG | + | chr2_3:11869424-11869443 | Msa0278770:intron | 55.0% | |
| ! | TCTGACTGACTGGTCAAGGC+CGG | - | chr2_3:11869756-11869775 | None:intergenic | 55.0% |
| GCCTTGACCAGTCAGTCAGA+CGG | + | chr2_3:11869756-11869775 | Msa0278770:intron | 55.0% | |
| ! | TCCGTCTGACTGACTGGTCA+AGG | - | chr2_3:11869760-11869779 | None:intergenic | 55.0% |
| !! | GGGTTAGTCCTGTCAGGTAC+CGG | + | chr2_3:11869800-11869819 | Msa0278770:intron | 55.0% |
| TGGATGGCAATGGCGACCAA+GGG | - | chr2_3:11870289-11870308 | None:intergenic | 55.0% | |
| TTGGATGGCAATGGCGACCA+AGG | - | chr2_3:11870290-11870309 | None:intergenic | 55.0% | |
| ! | GAACAAAGGAAGGGGGTGCA+GGG | - | chr2_3:11871134-11871153 | None:intergenic | 55.0% |
| ! | AGAACAAAGGAAGGGGGTGC+AGG | - | chr2_3:11871135-11871154 | None:intergenic | 55.0% |
| CCACCATGAAGCCTCGACAA+AGG | - | chr2_3:11871166-11871185 | None:intergenic | 55.0% | |
| CCTTTGTCGAGGCTTCATGG+TGG | + | chr2_3:11871163-11871182 | Msa0278770:intron | 55.0% | |
| ACAAAGGCTCCTCAAGCTGC+AGG | + | chr2_3:11871341-11871360 | Msa0278770:CDS | 55.0% | |
| CAAAGGCTCCTCAAGCTGCA+GGG | + | chr2_3:11871342-11871361 | Msa0278770:CDS | 55.0% | |
| AAAGGCTCCTCAAGCTGCAG+GGG | + | chr2_3:11871343-11871362 | Msa0278770:CDS | 55.0% | |
| ! | GAGGTGCTCATGAGGGGCAA+GGG | + | chr2_3:11865980-11865999 | Msa0278770:CDS | 60.0% |
| TGCTCATGAGGGGCAAGGGT+TGG | + | chr2_3:11865984-11866003 | Msa0278770:CDS | 60.0% | |
| GCTCATGAGGGGCAAGGGTT+GGG | + | chr2_3:11865985-11866004 | Msa0278770:CDS | 60.0% | |
| CGGCAGCTTTCCAATCCCCT+AGG | - | chr2_3:11867851-11867870 | None:intergenic | 60.0% | |
| AGGGGATTGGAAAGCTGCCG+AGG | + | chr2_3:11867851-11867870 | Msa0278770:CDS | 60.0% | |
| TCCAGGGTCCAGGAACATGG+TGG | + | chr2_3:11869427-11869446 | Msa0278770:intron | 60.0% | |
| ACCACCATGTTCCTGGACCC+TGG | - | chr2_3:11869431-11869450 | None:intergenic | 60.0% | |
| AGGGTCCAGGAACATGGTGG+TGG | + | chr2_3:11869430-11869449 | Msa0278770:intron | 60.0% | |
| TGGATAGCCCCTGCAGCTTG+AGG | - | chr2_3:11871353-11871372 | None:intergenic | 60.0% | |
| ! | CGAGGTGCTCATGAGGGGCA+AGG | + | chr2_3:11865979-11865998 | Msa0278770:CDS | 65.0% |
| ! | CAAAGGAAGGGGGTGCAGGG+AGG | - | chr2_3:11871131-11871150 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 11864474 | 11872746 | 11864474 | ID=Msa0278770;Name=Msa0278770 |
| chr2_3 | mRNA | 11864474 | 11872746 | 11864474 | ID=Msa0278770-mRNA-1;Parent=Msa0278770;Name=Msa0278770-mRNA-1;_AED=0.11;_eAED=0.11;_QI=102|0.90|0.91|1|1|1|12|365|412 |
| chr2_3 | exon | 11864474 | 11864662 | 11864474 | ID=Msa0278770-mRNA-1:exon:5314;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11865620 | 11865787 | 11865620 | ID=Msa0278770-mRNA-1:exon:5315;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11865937 | 11866060 | 11865937 | ID=Msa0278770-mRNA-1:exon:5316;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11866168 | 11866259 | 11866168 | ID=Msa0278770-mRNA-1:exon:5317;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11866709 | 11866807 | 11866709 | ID=Msa0278770-mRNA-1:exon:5318;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11867813 | 11867926 | 11867813 | ID=Msa0278770-mRNA-1:exon:5319;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11869028 | 11869092 | 11869028 | ID=Msa0278770-mRNA-1:exon:5320;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11869432 | 11869548 | 11869432 | ID=Msa0278770-mRNA-1:exon:5321;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11870623 | 11870698 | 11870623 | ID=Msa0278770-mRNA-1:exon:5322;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11871314 | 11871406 | 11871314 | ID=Msa0278770-mRNA-1:exon:5323;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11871945 | 11872049 | 11871945 | ID=Msa0278770-mRNA-1:exon:5324;Parent=Msa0278770-mRNA-1 |
| chr2_3 | exon | 11872283 | 11872746 | 11872283 | ID=Msa0278770-mRNA-1:exon:5325;Parent=Msa0278770-mRNA-1 |
| chr2_3 | five_prime_UTR | 11864474 | 11864575 | 11864474 | ID=Msa0278770-mRNA-1:five_prime_utr;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11864576 | 11864662 | 11864576 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11865620 | 11865787 | 11865620 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11865937 | 11866060 | 11865937 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11866168 | 11866259 | 11866168 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11866709 | 11866807 | 11866709 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11867813 | 11867926 | 11867813 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11869028 | 11869092 | 11869028 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11869432 | 11869548 | 11869432 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11870623 | 11870698 | 11870623 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11871314 | 11871406 | 11871314 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11871945 | 11872049 | 11871945 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | CDS | 11872283 | 11872381 | 11872283 | ID=Msa0278770-mRNA-1:cds;Parent=Msa0278770-mRNA-1 |
| chr2_3 | three_prime_UTR | 11872382 | 11872746 | 11872382 | ID=Msa0278770-mRNA-1:three_prime_utr;Parent=Msa0278770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
