AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0199050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0199050 MtrunA17_Chr2g0293491 76.190 294 12 2 1 236 1 294 1.51e-153 428
Msa0199050 MtrunA17_Chr4g0051261 89.394 132 14 0 105 236 163 294 2.03e-87 260
Msa0199050 MtrunA17_Chr4g0051261 93.396 106 7 0 1 106 1 106 3.58e-63 199
Msa0199050 MtrunA17_Chr8g0358921 37.288 295 122 4 1 232 44 338 1.37e-58 189
Msa0199050 MtrunA17_Chr6g0483151 38.028 284 119 5 2 229 12 294 3.95e-52 174
Msa0199050 MtrunA17_Chr4g0002001 57.031 128 54 1 105 232 180 306 4.65e-50 166
Msa0199050 MtrunA17_Chr4g0002001 55.660 106 34 2 1 93 1 106 1.97e-27 106
Msa0199050 MtrunA17_Chr1g0187371 54.688 128 57 1 105 232 185 311 1.25e-49 164
Msa0199050 MtrunA17_Chr1g0187371 48.624 109 43 3 2 104 16 117 2.54e-24 98.6
Msa0199050 MtrunA17_Chr8g0369451 32.082 293 139 6 1 236 1 290 1.12e-47 163
Msa0199050 MtrunA17_Chr5g0409421 31.399 293 141 5 1 236 1 290 3.46e-46 159
Msa0199050 MtrunA17_Chr3g0099951 33.448 290 132 6 2 232 12 299 1.39e-45 156
Msa0199050 MtrunA17_Chr4g0057791 34.333 300 127 9 1 231 215 513 2.81e-45 158
Msa0199050 MtrunA17_Chr8g0377071 35.314 303 120 9 1 232 382 679 3.27e-44 157
Msa0199050 MtrunA17_Chr8g0360761 40.933 193 97 3 39 230 9 185 4.68e-44 146
Msa0199050 MtrunA17_Chr3g0122781 33.648 318 120 8 1 232 413 725 3.32e-41 149
Msa0199050 MtrunA17_Chr8g0339221 31.058 293 143 5 1 236 1 291 1.34e-39 141
Msa0199050 MtrunA17_Chr4g0030151 30.556 288 137 6 10 235 45 331 3.36e-38 136
Msa0199050 MtrunA17_Chr3g0141871 28.716 296 141 4 3 232 31 322 5.11e-38 135
Msa0199050 MtrunA17_Chr4g0045841 29.268 287 135 6 10 232 61 343 5.35e-35 128
Msa0199050 MtrunA17_Chr8g0387401 29.553 291 136 6 7 232 55 341 2.51e-34 126
Msa0199050 MtrunA17_Chr6g0453711 29.932 294 145 5 2 235 108 400 3.36e-34 129
Msa0199050 MtrunA17_Chr8g0378831 29.630 297 137 7 3 232 31 322 4.40e-34 125
Msa0199050 MtrunA17_Chr3g0093571 48.413 126 64 1 105 229 199 324 1.31e-33 126
Msa0199050 MtrunA17_Chr3g0093571 47.000 100 37 1 4 87 25 124 3.77e-22 94.4
Msa0199050 MtrunA17_Chr3g0093391 47.619 126 65 1 105 229 197 322 2.34e-33 125
Msa0199050 MtrunA17_Chr3g0093391 45.000 100 39 1 4 87 23 122 8.49e-21 90.5
Msa0199050 MtrunA17_Chr2g0317501 30.479 292 134 8 2 229 132 418 3.54e-33 126
Msa0199050 MtrunA17_Chr4g0030231 28.866 291 138 6 7 232 43 329 4.08e-33 123
Msa0199050 MtrunA17_Chr7g0248461 28.125 288 138 7 7 229 41 324 4.29e-33 123
Msa0199050 MtrunA17_Chr3g0130781 45.000 140 61 4 106 230 191 329 3.11e-32 122
Msa0199050 MtrunA17_Chr3g0130781 46.739 92 44 2 1 87 15 106 1.12e-18 84.3
Msa0199050 MtrunA17_Chr8g0383451 31.802 283 126 6 10 230 4 281 3.96e-32 122
Msa0199050 MtrunA17_Chr8g0348481 27.083 288 141 6 7 229 40 323 7.05e-32 119
Msa0199050 MtrunA17_Chr5g0397261 29.167 288 135 7 10 232 47 330 1.09e-30 116
Msa0199050 MtrunA17_Chr3g0102571 42.969 128 72 1 106 232 242 369 2.10e-30 116
Msa0199050 MtrunA17_Chr3g0102571 39.175 97 54 1 3 94 31 127 7.75e-14 70.1
Msa0199050 MtrunA17_Chr7g0218071 30.169 295 144 9 2 235 118 411 4.83e-30 117
Msa0199050 MtrunA17_Chr2g0286421 36.571 175 102 5 56 229 220 386 2.22e-29 115
Msa0199050 MtrunA17_Chr2g0286421 48.315 89 42 3 2 87 100 187 7.16e-16 76.3
Msa0199050 MtrunA17_Chr3g0131861 41.270 126 72 2 105 229 257 381 2.91e-28 112
Msa0199050 MtrunA17_Chr3g0131861 49.425 87 40 3 4 87 97 182 8.55e-16 75.9
Msa0199050 MtrunA17_Chr5g0396361 41.667 132 75 2 99 229 294 424 3.03e-28 112
Msa0199050 MtrunA17_Chr5g0396361 43.182 88 48 1 2 87 138 225 4.12e-15 73.9
Msa0199050 MtrunA17_Chr8g0385971 38.816 152 88 3 79 229 227 374 6.35e-28 110
Msa0199050 MtrunA17_Chr8g0385971 45.349 86 45 1 4 87 90 175 2.24e-16 77.8
Msa0199050 MtrunA17_Chr4g0061141 35.795 176 104 4 56 230 223 390 1.04e-27 110
Msa0199050 MtrunA17_Chr4g0061141 37.963 108 62 4 2 106 103 208 4.98e-13 68.2
Msa0199050 MtrunA17_Chr6g0486031 39.062 128 76 2 106 231 275 402 1.75e-27 108
Msa0199050 MtrunA17_Chr4g0040141 36.601 153 90 4 79 229 266 413 2.36e-27 109
Msa0199050 MtrunA17_Chr4g0040141 41.860 86 48 1 4 87 129 214 1.47e-15 75.5
Msa0199050 MtrunA17_Chr8g0390341 38.281 128 77 2 106 231 288 415 5.43e-27 107
Msa0199050 MtrunA17_Chr4g0066691 39.394 132 78 2 99 229 258 388 2.95e-26 106
Msa0199050 MtrunA17_Chr4g0066691 40.741 108 59 4 2 106 102 207 2.77e-15 74.7
Msa0199050 MtrunA17_Chr7g0273601 34.868 152 94 4 79 229 244 391 3.05e-26 106
Msa0199050 MtrunA17_Chr7g0273601 44.944 89 45 3 2 87 105 192 3.79e-15 74.3
Msa0199050 MtrunA17_Chr1g0191221 37.879 132 80 2 99 229 276 406 3.96e-26 105
Msa0199050 MtrunA17_Chr1g0191221 42.593 108 57 4 2 106 120 225 2.99e-15 74.3
Msa0199050 MtrunA17_Chr2g0320011 25.086 291 143 9 10 233 94 376 5.21e-26 104
Msa0199050 MtrunA17_Chr2g0284091 25.773 291 141 9 10 233 46 328 6.54e-26 103
Msa0199050 MtrunA17_Chr2g0324461 41.353 133 70 3 101 229 297 425 8.28e-26 105
Msa0199050 MtrunA17_Chr2g0324461 40.698 86 49 1 4 87 141 226 1.54e-15 75.5
Msa0199050 MtrunA17_Chr8g0359091 30.000 300 142 7 3 235 25 323 5.38e-25 102
Msa0199050 MtrunA17_Chr5g0443351 30.303 297 139 7 3 232 21 316 6.25e-25 102
Msa0199050 MtrunA17_Chr2g0287271 29.000 300 145 7 3 235 24 322 8.63e-24 99.4
Msa0199050 MtrunA17_Chr1g0201571 28.276 290 141 7 2 229 124 408 9.86e-24 99.4
Msa0199050 MtrunA17_Chr4g0065851 28.767 292 140 7 8 232 29 319 1.01e-23 99.0
Msa0199050 MtrunA17_Chr3g0102601 30.846 201 124 5 47 232 7 207 2.10e-23 94.7
Msa0199050 MtrunA17_Chr7g0246591 35.294 136 84 3 100 233 296 429 3.12e-23 97.4
Msa0199050 MtrunA17_Chr3g0102581 28.311 219 138 5 3 212 5 213 4.93e-23 93.2
Msa0199050 MtrunA17_Chr3g0096631 30.000 300 142 7 3 235 24 322 1.76e-22 95.5
Msa0199050 MtrunA17_Chr8g0350311 32.192 146 75 2 100 233 294 427 8.07e-22 93.2
Msa0199050 MtrunA17_Chr1g0193081 33.088 136 87 3 100 233 230 363 3.06e-21 91.3
Msa0199050 MtrunA17_Chr7g0270371 25.263 285 150 10 10 233 81 363 1.90e-20 89.0
Msa0199050 MtrunA17_Chr2g0277011 30.070 143 82 2 100 233 245 378 2.68e-20 88.6
Msa0199050 MtrunA17_Chr1g0194201 24.399 291 157 8 4 233 75 363 4.87e-20 87.8
Msa0199050 MtrunA17_Chr4g0030241 53.968 63 29 0 106 168 62 124 1.84e-18 80.1
Msa0199050 MtrunA17_Chr8g0392811 34.328 134 83 3 106 235 282 414 3.91e-18 82.8
Msa0199050 MtrunA17_Chr6g0482681 36.567 134 80 3 106 235 254 386 1.03e-15 75.9
Msa0199050 MtrunA17_Chr4g0053821 30.000 140 89 3 103 233 239 378 1.68e-15 74.7
Msa0199050 MtrunA17_Chr4g0053951 31.206 141 86 4 103 233 270 409 2.88e-15 74.3
Msa0199050 MtrunA17_Chr5g0401371 29.078 141 89 4 103 233 265 404 2.29e-14 71.6
Msa0199050 MtrunA17_Chr8g0378871 33.673 98 63 1 134 229 6 103 4.34e-14 67.8
Msa0199050 MtrunA17_Chr2g0314321 34.211 152 70 4 106 232 190 336 2.59e-13 68.9
Msa0199050 MtrunA17_Chr3g0139371 31.013 158 88 4 93 230 243 399 2.75e-13 68.6
Msa0199050 MtrunA17_Chr1g0205421 28.293 205 88 7 1 146 9 213 8.02e-13 67.0
Msa0199050 MtrunA17_Chr8g0369241 26.484 219 92 6 10 163 145 359 9.67e-13 67.4
Msa0199050 MtrunA17_Chr3g0116701 30.625 160 84 6 93 229 264 419 1.19e-11 63.5
Msa0199050 MtrunA17_Chr4g0058241 31.973 147 73 6 106 229 281 423 2.77e-11 62.8
Msa0199050 MtrunA17_Chr5g0419441 40.741 81 45 2 3 82 238 316 2.88e-11 62.8
Msa0199050 MtrunA17_Chr3g0107011 39.759 83 49 1 1 82 11 93 5.17e-11 62.0
Msa0199050 MtrunA17_Chr8g0392821 31.429 105 58 2 123 227 47 137 7.55e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0199050 AT3G48750.1 63.605 294 49 2 1 236 1 294 2.74e-127 362
Msa0199050 AT3G54180.1 43.934 305 97 6 1 232 1 304 1.57e-78 239
Msa0199050 AT1G76540.1 41.275 298 108 6 1 232 11 307 3.35e-77 235
Msa0199050 AT2G38620.4 44.578 249 116 5 1 232 1 244 2.11e-67 208
Msa0199050 AT5G63370.2 37.294 303 119 5 1 232 160 462 7.81e-59 193
Msa0199050 AT5G63370.3 37.294 303 119 5 1 232 160 462 7.81e-59 193
Msa0199050 AT5G63370.7 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0199050 AT5G63370.8 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0199050 AT5G63370.4 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0199050 AT5G63370.6 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0199050 AT5G63370.1 37.294 303 119 5 1 232 294 596 1.58e-57 192
Msa0199050 AT1G66750.1 39.298 285 116 5 1 229 10 293 7.98e-57 184
Msa0199050 AT1G73690.1 38.028 284 119 5 2 229 9 291 8.81e-56 183
Msa0199050 AT1G18040.1 37.324 284 121 6 2 229 10 292 1.38e-52 174
Msa0199050 AT1G20930.1 57.812 128 53 1 105 232 183 309 3.79e-52 171
Msa0199050 AT1G20930.1 47.458 118 56 2 1 112 13 130 1.53e-24 99.4
Msa0199050 AT2G38620.2 57.812 128 53 1 105 232 180 306 6.86e-52 171
Msa0199050 AT2G38620.2 56.604 106 33 3 1 93 1 106 3.53e-26 103
Msa0199050 AT5G63370.9 37.903 248 91 4 3 187 162 409 7.18e-49 166
Msa0199050 AT1G67580.1 34.333 300 127 8 1 232 403 700 2.29e-48 169
Msa0199050 AT1G67580.2 34.333 300 127 8 1 232 403 700 2.29e-48 169
Msa0199050 AT5G63370.5 37.600 250 93 4 1 187 294 543 2.05e-47 164
Msa0199050 AT5G63370.10 37.600 250 93 4 1 187 294 543 2.05e-47 164
Msa0199050 AT5G50860.2 34.843 287 124 8 4 229 114 398 4.10e-44 155
Msa0199050 AT5G50860.1 34.843 287 124 8 4 229 114 398 1.48e-43 154
Msa0199050 AT4G22940.1 31.849 292 133 6 2 230 101 389 6.76e-42 148
Msa0199050 AT4G13020.7 32.168 286 134 5 1 229 1 283 8.39e-42 146
Msa0199050 AT4G13020.6 32.168 286 134 5 1 229 1 283 1.36e-41 146
Msa0199050 AT4G13020.4 32.168 286 134 5 1 229 1 283 1.66e-41 146
Msa0199050 AT4G13020.1 32.168 286 134 5 1 229 1 283 2.40e-41 146
Msa0199050 AT4G22940.2 31.959 291 132 6 3 230 102 389 3.22e-41 148
Msa0199050 AT4G13020.2 31.707 287 136 5 1 230 9 292 3.09e-40 143
Msa0199050 AT4G13020.3 31.707 287 136 5 1 230 9 292 3.14e-40 143
Msa0199050 AT5G45430.1 29.530 298 140 6 1 236 1 290 6.99e-40 143
Msa0199050 AT5G45430.2 29.530 298 140 6 1 236 1 290 7.94e-40 143
Msa0199050 AT4G13020.8 30.508 295 136 5 1 229 1 292 2.32e-39 140
Msa0199050 AT4G13020.5 30.508 295 136 5 1 229 1 292 6.76e-39 140
Msa0199050 AT4G19110.2 28.188 298 144 6 1 236 1 290 9.23e-39 140
Msa0199050 AT4G19110.1 28.188 298 144 6 1 236 1 290 1.00e-38 140
Msa0199050 AT3G45640.1 30.877 285 134 6 10 232 44 327 1.42e-38 137
Msa0199050 AT3G59790.1 31.488 289 135 6 7 232 63 351 1.62e-38 138
Msa0199050 AT2G46070.1 28.521 284 142 5 7 229 44 327 8.97e-36 130
Msa0199050 AT1G59580.2 28.669 293 139 4 3 229 31 319 9.24e-36 130
Msa0199050 AT1G59580.1 28.669 293 139 4 3 229 31 319 9.24e-36 130
Msa0199050 AT2G46070.3 28.521 284 142 5 7 229 78 361 1.40e-35 130
Msa0199050 AT2G18170.1 28.716 296 141 5 3 232 31 322 6.16e-35 128
Msa0199050 AT1G10210.2 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0199050 AT1G10210.3 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0199050 AT1G10210.1 28.328 293 140 4 3 229 31 319 6.19e-35 128
Msa0199050 AT2G43790.1 29.268 287 135 6 10 232 69 351 1.57e-34 127
Msa0199050 AT5G63610.1 47.482 139 59 3 106 230 196 334 2.72e-34 128
Msa0199050 AT5G63610.1 46.667 90 45 2 1 87 22 111 8.45e-17 79.3
Msa0199050 AT2G46070.2 28.467 274 135 5 7 219 44 317 6.75e-34 124
Msa0199050 AT5G39420.1 30.450 289 138 7 2 229 103 389 3.62e-33 126
Msa0199050 AT4G11330.1 29.514 288 134 7 7 229 46 329 4.31e-33 123
Msa0199050 AT3G01085.3 31.724 290 134 8 2 229 113 400 1.48e-32 124
Msa0199050 AT3G01085.1 31.724 290 134 8 2 229 113 400 2.37e-32 124
Msa0199050 AT3G01085.2 31.724 290 134 8 2 229 113 400 2.37e-32 124
Msa0199050 AT5G10270.1 44.444 126 69 1 105 229 200 325 2.63e-32 123
Msa0199050 AT5G10270.1 47.000 100 37 1 4 87 26 125 4.72e-22 94.4
Msa0199050 AT5G64960.1 43.750 128 67 2 105 229 200 325 4.31e-32 122
Msa0199050 AT5G64960.1 47.000 100 37 1 4 87 26 125 7.18e-22 94.0
Msa0199050 AT5G64960.2 43.750 128 67 2 105 229 147 272 4.54e-32 122
Msa0199050 AT1G57700.1 30.508 295 140 7 2 234 144 435 4.64e-32 123
Msa0199050 AT4G36450.1 29.392 296 136 7 3 232 31 319 8.44e-32 119
Msa0199050 AT4G19110.3 36.478 159 95 2 79 236 81 234 9.43e-32 120
Msa0199050 AT4G10010.1 43.077 130 72 2 101 229 132 260 5.32e-29 114
Msa0199050 AT4G01370.1 27.758 281 142 6 10 229 49 329 1.02e-28 111
Msa0199050 AT4G10010.2 43.077 130 72 2 101 229 312 440 2.58e-28 112
Msa0199050 AT4G10010.2 43.182 88 48 1 2 87 154 241 1.82e-15 75.5
Msa0199050 AT5G44290.7 40.441 136 79 2 101 235 293 427 4.88e-28 111
Msa0199050 AT5G44290.7 43.023 86 47 1 4 87 137 222 5.65e-16 77.0
Msa0199050 AT1G03740.2 40.152 132 75 2 106 235 374 503 5.74e-28 112
Msa0199050 AT1G03740.2 43.023 86 47 1 4 87 213 298 7.71e-16 76.6
Msa0199050 AT1G03740.1 40.152 132 75 2 106 235 374 503 5.80e-28 112
Msa0199050 AT1G03740.1 43.023 86 47 1 4 87 213 298 9.13e-16 76.6
Msa0199050 AT1G09600.1 41.667 132 75 2 99 229 317 447 6.16e-28 112
Msa0199050 AT1G09600.1 39.252 107 62 2 2 106 161 266 3.51e-16 77.8
Msa0199050 AT5G44290.2 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0199050 AT5G44290.2 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0199050 AT5G44290.5 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0199050 AT5G44290.5 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0199050 AT5G44290.4 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0199050 AT5G44290.4 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0199050 AT5G44290.1 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0199050 AT5G44290.1 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0199050 AT5G44290.3 40.441 136 79 2 101 235 293 427 6.34e-28 111
Msa0199050 AT5G44290.3 43.023 86 47 1 4 87 137 222 8.19e-16 76.6
Msa0199050 AT5G44290.6 40.441 136 79 2 101 235 293 427 6.91e-28 111
Msa0199050 AT5G44290.6 43.023 86 47 1 4 87 137 222 5.46e-16 77.0
Msa0199050 AT1G71530.2 42.063 126 71 2 105 229 307 431 3.08e-27 108
Msa0199050 AT1G71530.2 44.318 88 47 1 2 87 145 232 5.71e-16 77.0
Msa0199050 AT1G71530.1 42.063 126 71 2 105 229 307 431 3.55e-27 109
Msa0199050 AT1G71530.1 44.318 88 47 1 2 87 145 232 1.37e-15 75.9
Msa0199050 AT4G28980.3 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0199050 AT4G28980.1 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0199050 AT4G28980.2 39.844 128 75 2 106 231 293 420 3.61e-27 108
Msa0199050 AT1G54610.1 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0199050 AT1G54610.1 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0199050 AT1G54610.3 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0199050 AT1G54610.3 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0199050 AT1G54610.2 40.299 134 74 3 99 229 272 402 7.68e-27 108
Msa0199050 AT1G54610.2 46.392 97 47 4 2 95 116 210 8.79e-16 76.3
Msa0199050 AT2G38620.3 56.604 106 33 3 1 93 1 106 1.36e-26 103
Msa0199050 AT2G38620.3 72.414 58 16 0 105 162 180 237 4.70e-25 99.8
Msa0199050 AT2G38620.1 56.604 106 33 3 1 93 1 106 1.36e-26 103
Msa0199050 AT2G38620.1 72.414 58 16 0 105 162 180 237 4.70e-25 99.8
Msa0199050 AT1G01560.2 38.889 126 75 1 106 229 201 326 1.59e-26 105
Msa0199050 AT1G53050.2 43.066 137 69 4 100 229 284 418 2.44e-26 107
Msa0199050 AT1G53050.2 42.593 108 57 4 2 106 132 237 2.09e-14 72.4
Msa0199050 AT1G53050.1 43.066 137 69 4 100 229 284 418 2.44e-26 107
Msa0199050 AT1G53050.1 42.593 108 57 4 2 106 132 237 2.09e-14 72.4
Msa0199050 AT1G74330.2 37.342 158 96 3 79 235 258 413 3.24e-26 107
Msa0199050 AT1G74330.2 38.889 108 61 4 2 106 119 224 6.49e-12 65.1
Msa0199050 AT1G74330.1 37.342 158 96 3 79 235 258 413 3.39e-26 106
Msa0199050 AT1G74330.1 38.889 108 61 4 2 106 119 224 6.52e-12 65.1
Msa0199050 AT1G06390.2 25.430 291 142 9 10 233 76 358 3.58e-26 105
Msa0199050 AT1G06390.1 25.430 291 142 9 10 233 76 358 3.58e-26 105
Msa0199050 AT1G74330.3 37.342 158 96 3 79 235 258 413 3.67e-26 106
Msa0199050 AT1G74330.3 38.889 108 61 4 2 106 119 224 5.33e-12 65.5
Msa0199050 AT4G18710.1 25.773 291 141 9 10 233 46 328 4.39e-26 104
Msa0199050 AT1G71530.3 41.935 124 70 2 105 227 307 429 5.44e-26 105
Msa0199050 AT1G71530.3 44.318 88 47 1 2 87 145 232 6.68e-16 76.6
Msa0199050 AT2G42880.2 30.508 295 137 6 8 235 29 322 5.68e-26 105
Msa0199050 AT3G14720.2 30.743 296 135 7 3 230 24 317 1.26e-25 103
Msa0199050 AT3G14720.3 30.743 296 135 7 3 230 24 317 1.26e-25 103
Msa0199050 AT2G30980.1 25.430 291 142 9 10 233 78 360 1.27e-25 103
Msa0199050 AT2G01450.3 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0199050 AT2G01450.1 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0199050 AT2G01450.2 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0199050 AT2G01450.4 28.333 300 147 7 3 235 15 313 1.66e-25 104
Msa0199050 AT1G01560.3 38.655 119 71 1 106 222 201 319 1.93e-25 102
Msa0199050 AT1G18670.1 32.787 183 113 4 56 235 249 424 4.70e-25 103
Msa0199050 AT1G18670.1 40.741 108 59 4 2 106 129 234 5.61e-14 71.2
Msa0199050 AT1G18670.2 32.787 183 113 4 56 235 249 424 5.11e-25 103
Msa0199050 AT1G18670.2 40.741 108 59 4 2 106 129 234 3.74e-14 71.6
Msa0199050 AT1G18670.3 32.787 183 113 4 56 235 249 424 5.51e-25 103
Msa0199050 AT1G18670.3 40.741 108 59 4 2 106 129 234 5.58e-14 71.2
Msa0199050 AT1G07880.2 38.760 129 77 1 106 232 194 322 7.94e-25 100
Msa0199050 AT1G07880.2 32.353 102 64 1 7 103 36 137 5.98e-11 62.0
Msa0199050 AT1G33770.1 43.846 130 71 2 101 229 297 425 3.32e-24 100
Msa0199050 AT1G33770.1 43.182 88 48 1 2 87 139 226 5.07e-16 77.0
Msa0199050 AT3G14720.1 30.405 296 136 8 3 230 24 317 1.60e-23 99.0
Msa0199050 AT5G19010.1 28.667 300 146 7 3 235 24 322 4.19e-23 97.8
Msa0199050 AT3G61160.4 26.117 291 152 9 4 233 102 390 6.06e-23 96.7
Msa0199050 AT2G42880.1 29.831 295 139 7 8 235 29 322 9.97e-23 96.7
Msa0199050 AT3G61160.2 26.460 291 151 10 4 233 109 397 1.69e-22 95.5
Msa0199050 AT3G61160.1 33.824 136 86 3 100 233 257 390 2.19e-22 95.1
Msa0199050 AT4G18710.2 26.667 240 101 7 10 180 40 273 2.23e-22 92.8
Msa0199050 AT4G00720.1 25.965 285 148 9 10 233 144 426 5.62e-22 94.4
Msa0199050 AT5G14640.1 32.353 136 88 3 100 233 229 362 5.05e-21 90.9
Msa0199050 AT5G14640.2 32.353 136 88 3 100 233 229 362 5.05e-21 90.9
Msa0199050 AT1G57870.1 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0199050 AT1G57870.4 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0199050 AT1G57870.2 30.769 143 81 2 100 233 237 370 1.97e-20 89.4
Msa0199050 AT3G05840.2 31.618 136 89 3 100 233 228 361 2.01e-20 89.4
Msa0199050 AT3G05840.1 31.618 136 89 3 100 233 228 361 2.01e-20 89.4
Msa0199050 AT1G57870.3 30.769 143 81 2 100 233 237 370 2.15e-20 89.4
Msa0199050 AT1G09840.11 30.769 143 81 2 100 233 111 244 2.23e-20 87.8
Msa0199050 AT1G09840.3 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.7 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.10 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.6 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.4 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.1 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.9 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.5 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.8 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT1G09840.2 30.769 143 81 2 100 233 238 371 5.86e-20 88.2
Msa0199050 AT5G26751.1 31.618 136 89 3 100 233 224 357 8.40e-20 87.4
Msa0199050 AT3G61160.5 34.146 123 77 3 100 220 257 377 2.12e-19 86.3
Msa0199050 AT1G18150.3 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0199050 AT1G18150.2 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0199050 AT1G18150.1 27.609 297 147 7 3 232 103 398 3.11e-18 83.6
Msa0199050 AT3G05050.3 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0199050 AT3G05050.3 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0199050 AT3G05050.2 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0199050 AT3G05050.2 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0199050 AT3G05050.1 48.485 66 34 0 105 170 298 363 6.86e-18 82.8
Msa0199050 AT3G05050.1 40.187 107 61 2 2 106 136 241 3.24e-16 77.8
Msa0199050 AT3G18040.1 28.231 294 143 8 3 229 22 314 1.43e-17 81.6
Msa0199050 AT3G18040.5 28.231 294 143 8 3 229 17 309 1.47e-17 81.6
Msa0199050 AT3G18040.3 28.231 294 143 8 3 229 131 423 1.63e-17 81.6
Msa0199050 AT3G18040.4 28.231 294 143 8 3 229 131 423 1.98e-17 81.3
Msa0199050 AT2G23080.1 32.143 140 86 3 103 233 184 323 4.79e-17 79.3
Msa0199050 AT3G61160.3 39.080 87 50 2 100 185 257 341 1.13e-16 78.2
Msa0199050 AT3G61160.6 43.939 66 37 0 100 165 264 329 1.25e-16 78.2
Msa0199050 AT1G73670.1 36.296 135 73 4 106 232 255 384 1.80e-16 78.6
Msa0199050 AT1G71530.4 44.318 88 47 1 2 87 145 232 5.00e-16 76.6
Msa0199050 AT1G71530.4 52.083 48 23 0 105 152 307 354 2.09e-12 66.2
Msa0199050 AT5G67380.2 29.286 140 90 3 103 233 227 366 1.24e-15 75.5
Msa0199050 AT5G67380.1 29.286 140 90 3 103 233 260 399 1.42e-15 75.5
Msa0199050 AT1G53510.1 39.259 135 69 4 106 232 190 319 1.89e-15 75.5
Msa0199050 AT5G35980.2 27.982 218 89 6 10 163 128 341 7.76e-15 73.9
Msa0199050 AT2G23070.1 32.394 142 83 5 103 233 282 421 1.01e-14 73.2
Msa0199050 AT5G35980.3 27.273 231 100 6 2 168 85 311 1.11e-14 73.6
Msa0199050 AT5G35980.1 27.273 231 100 6 2 168 120 346 1.71e-14 72.8
Msa0199050 AT3G18040.2 35.821 134 81 3 106 235 100 232 3.47e-14 71.6
Msa0199050 AT3G50000.1 28.571 140 91 3 103 233 254 393 3.48e-14 71.6
Msa0199050 AT1G07880.1 56.000 50 22 0 106 155 194 243 1.19e-13 68.9
Msa0199050 AT1G07880.1 32.353 102 64 1 7 103 36 137 3.40e-11 62.0
Msa0199050 AT1G01560.4 54.000 50 23 0 106 155 201 250 2.50e-13 68.2
Msa0199050 AT1G01560.1 54.000 50 23 0 106 155 201 250 2.50e-13 68.2
Msa0199050 AT4G24740.10 31.757 148 72 6 106 229 75 217 3.75e-13 67.0
Msa0199050 AT4G24740.8 31.757 148 72 6 106 229 75 217 3.75e-13 67.0
Msa0199050 AT4G24740.6 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0199050 AT4G24740.9 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0199050 AT4G24740.2 31.757 148 72 6 106 229 178 320 8.90e-13 67.0
Msa0199050 AT4G24740.7 31.757 148 72 6 106 229 243 385 2.16e-12 66.2
Msa0199050 AT4G24740.1 31.757 148 72 6 106 229 281 423 2.16e-12 66.2
Msa0199050 AT3G53570.1 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0199050 AT3G53570.4 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0199050 AT3G53570.2 32.432 148 72 6 106 229 300 443 4.35e-12 65.5
Msa0199050 AT3G53570.3 32.432 148 72 6 106 229 286 429 4.88e-12 65.5
Msa0199050 AT3G53570.5 32.432 148 72 6 106 229 286 429 4.88e-12 65.5
Msa0199050 AT4G01595.1 50.980 51 25 0 123 173 20 70 4.41e-11 59.3

Find 73 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAATATGTGCAGAATTTA+TGG 0.082765 2_1:-17917941 Msa0199050:three_prime_UTR
AAGATATTGATTATAGAATT+AGG 0.138235 2_1:+17917982 None:intergenic
TTCTATAATCAATATCTTAA+TGG 0.202009 2_1:-17917977 Msa0199050:three_prime_UTR
ATGAGTTATTTAAAATATTT+AGG 0.239843 2_1:-17919676 Msa0199050:intron
CGAGATCCAAGCAATATTTC+CGG 0.312083 2_1:+17919794 None:intergenic
CAGTGACAAGCGATTGTATC+TGG 0.313242 2_1:-17922053 Msa0199050:CDS
AGATATTGATTATAGAATTA+GGG 0.320103 2_1:+17917983 None:intergenic
AGACATTTACTTACCTTAGA+TGG 0.323829 2_1:+17919061 None:intergenic
AGACCAGCTGGCTCAAGATT+TGG 0.324310 2_1:+17918950 None:intergenic
GGAAATGTTGATTTAAAATC+AGG 0.327943 2_1:+17919091 None:intergenic
CCCACTGACCAAACATCAAC+TGG 0.335027 2_1:+17919758 None:intergenic
CCTGGCCATGTATCTTCATT+TGG 0.339457 2_1:+17919127 None:intergenic
AAATTGAAGATCTGAGAAAA+TGG 0.341183 2_1:+17923418 None:intergenic
GTTGAATCTGAAATATTTGT+AGG 0.346235 2_1:+17917836 None:intergenic
ATTTCCCAGGTGGCCATCTA+AGG 0.351155 2_1:-17919074 Msa0199050:intron
GCTCCTGGCAGTAATTCTTT+TGG 0.360943 2_1:+17918045 None:intergenic
GAAGAAGATTCGACTTGAAC+AGG 0.377015 2_1:-17923161 Msa0199050:CDS
ATTCTACCCCAGTTGATGTT+TGG 0.400330 2_1:-17919766 Msa0199050:CDS
ATGGAGAGAAAGGTATATAA+AGG 0.409139 2_1:+17923437 None:intergenic
TCTTGCAATAATATACGTAT+TGG 0.409205 2_1:+17917712 None:intergenic
ATCTGAGAAAATGGAGAGAA+AGG 0.412177 2_1:+17923427 None:intergenic
ATTAAATATGACAGGATCCT+AGG 0.420576 2_1:+17917866 None:intergenic
ATTCCAGAGCATGCTTTGCT+TGG 0.422112 2_1:-17918074 Msa0199050:intron
TTGTGTGCATGACAGGTTGC+AGG 0.425605 2_1:-17922086 Msa0199050:intron
TTCATGCTCCACAGCGCTCC+TGG 0.444473 2_1:+17918030 None:intergenic
CTTAGATCTGAAGAAGCATA+TGG 0.456457 2_1:-17922014 Msa0199050:CDS
TTTAAATAACTCATCAATCT+CGG 0.469825 2_1:+17919685 None:intergenic
AACATACGGCGTCGTTTACA+AGG 0.470308 2_1:-17923218 Msa0199050:CDS
CCAGTTGATGTTTGGTCAGT+GGG 0.471352 2_1:-17919758 Msa0199050:CDS
TACACTGTGGTACCGAGCTC+CGG 0.471861 2_1:-17919813 Msa0199050:CDS
AATCGGCGACCTCTATTCCC+TGG 0.474228 2_1:-17919713 Msa0199050:CDS
AATCAATATCTTAATGGTAA+AGG 0.481493 2_1:-17917971 Msa0199050:three_prime_UTR
ATCGGCGACCTCTATTCCCT+GGG 0.499404 2_1:-17919712 Msa0199050:CDS
AAGTCTGAATGGCAATATAC+AGG 0.502485 2_1:-17917781 Msa0199050:three_prime_UTR
TACGAAAAGGTGGAGAAGAT+TGG 0.503558 2_1:-17923247 Msa0199050:CDS
ATCTCACGAATGGCGGTGCT+AGG 0.506207 2_1:+17923124 None:intergenic
TCAGGCAATGAAGTTACTCC+TGG 0.506307 2_1:+17919109 None:intergenic
CCCAGTTGATGTTTGGTCAG+TGG 0.508697 2_1:-17919759 Msa0199050:CDS
GATTTGGAACCACGGTTGCT+AGG 0.511473 2_1:+17918966 None:intergenic
CGAGCTCCGGAAATATTGCT+TGG 0.517006 2_1:-17919800 Msa0199050:CDS
GACAAAATATTAAATATGAC+AGG 0.519656 2_1:+17917858 None:intergenic
TCATCAATCTCGGAATCCCC+AGG 0.521762 2_1:+17919695 None:intergenic
GTTCCAAATCTTGAGCCAGC+TGG 0.530061 2_1:-17918953 Msa0199050:CDS
GGGATGTATATTTGCAGAGA+TGG 0.536491 2_1:-17919738 Msa0199050:CDS
CCACCAAAAGAATTACTGCC+AGG 0.543217 2_1:-17918048 Msa0199050:CDS
CCAAATGAAGATACATGGCC+AGG 0.550637 2_1:-17919127 Msa0199050:CDS
TTAAGAAGATCAAGACCAGC+TGG 0.550908 2_1:+17918938 None:intergenic
TCGGAATCCCCAGGGAATAG+AGG 0.553263 2_1:+17919704 None:intergenic
CGACTTGAACAGGAAGATGA+AGG 0.558474 2_1:-17923151 Msa0199050:CDS
TATTTGCAGAGATGGCAAAT+CGG 0.561219 2_1:-17919730 Msa0199050:CDS
TGCAGCATAGGAACATCGTT+AGG 0.570773 2_1:-17923084 Msa0199050:intron
GCTACTTTCTTCAAAGACCT+AGG 0.572462 2_1:-17917883 Msa0199050:three_prime_UTR
AAGATTGGTGAAGGAACATA+CGG 0.575038 2_1:-17923232 Msa0199050:CDS
CAAGCAATATTTCCGGAGCT+CGG 0.578128 2_1:+17919801 None:intergenic
TCGAATCTTCTTCAACGCGA+TGG 0.583845 2_1:+17923171 None:intergenic
CGATGGTTTCATTCGTAACA+CGG 0.593784 2_1:+17923188 None:intergenic
CCACTGACCAAACATCAACT+GGG 0.597741 2_1:+17919759 None:intergenic
CTTACCTTAGATGGCCACCT+GGG 0.599601 2_1:+17919070 None:intergenic
CGGGAGAGAGAGATGAGTCT+CGG 0.613428 2_1:-17923482 Msa0199050:five_prime_UTR
TGCTTAAAGAAATGCAGCAT+AGG 0.616303 2_1:-17923096 Msa0199050:CDS
AAGCAGCGAAATCTCACGAA+TGG 0.622360 2_1:+17923114 None:intergenic
ACTTACCTTAGATGGCCACC+TGG 0.622989 2_1:+17919069 None:intergenic
CAGCGAAATCTCACGAATGG+CGG 0.633511 2_1:+17923117 None:intergenic
GTACACCAAATGAAGATACA+TGG 0.634052 2_1:-17919132 Msa0199050:CDS
AAGGTGGAGAAGATTGGTGA+AGG 0.638609 2_1:-17923241 Msa0199050:CDS
TTAAATCAACATTTCCCAGG+TGG 0.647469 2_1:-17919084 Msa0199050:CDS
CATCAATCTCGGAATCCCCA+GGG 0.652311 2_1:+17919696 None:intergenic
AATTACTGCCAGGAGCGCTG+TGG 0.660367 2_1:-17918038 Msa0199050:CDS
TTTGCAGGACCTAGCAACCG+TGG 0.665321 2_1:-17918975 Msa0199050:intron
TGGCTCAAGATTTGGAACCA+CGG 0.688247 2_1:+17918958 None:intergenic
CACTGACCAAACATCAACTG+GGG 0.711534 2_1:+17919760 None:intergenic
GTTTGTAGGTAGTTACACTG+TGG 0.718192 2_1:-17919826 Msa0199050:intron
TCGGCGACCTCTATTCCCTG+GGG 0.729622 2_1:-17919711 Msa0199050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAATTATGAATATTAAG+AGG + chr2_1:17919946-17919965 None:intergenic 10.0%
!!! ATGAGTTATTTAAAATATTT+AGG - chr2_1:17921524-17921543 Msa0199050:intron 10.0%
!! TGTTAAATATATTTGAAAAA+CGG - chr2_1:17921939-17921958 Msa0199050:intron 10.0%
!!! TATCATTTATTTGATAATTA+AGG - chr2_1:17922626-17922645 Msa0199050:intron 10.0%
!! AAAAAAGAAAGAAAATTTAA+TGG + chr2_1:17922700-17922719 None:intergenic 10.0%
!!! TTAAATTTTCTTTCTTTTTT+TGG - chr2_1:17922700-17922719 Msa0199050:intron 10.0%
!!! TGATTTTAGTGTTATTTTTT+TGG - chr2_1:17918349-17918368 Msa0199050:intron 15.0%
!! TAAAATTTAGGAATTTAGTA+AGG + chr2_1:17918868-17918887 None:intergenic 15.0%
!! AATCATAGTACATAAAATTT+AGG + chr2_1:17918880-17918899 None:intergenic 15.0%
!! AAAATGAAACAGAAATAAAT+AGG - chr2_1:17920553-17920572 Msa0199050:intron 15.0%
!! AAATGAAACAGAAATAAATA+GGG - chr2_1:17920554-17920573 Msa0199050:intron 15.0%
!!! TTTTGACTTTAATATTTACA+AGG - chr2_1:17921620-17921639 Msa0199050:intron 15.0%
!!! TTTGACTTTAATATTTACAA+GGG - chr2_1:17921621-17921640 Msa0199050:intron 15.0%
!!! TTGTTATTCTTATTTATAAG+TGG - chr2_1:17921682-17921701 Msa0199050:intron 15.0%
!! GTTATAATATTAGAGTAATA+AGG + chr2_1:17922193-17922212 None:intergenic 15.0%
!!! GATGAAATATTATTTTTCTT+TGG - chr2_1:17922301-17922320 Msa0199050:intron 15.0%
!!! AGTTTATTTTGTTCTTAATT+AGG - chr2_1:17922430-17922449 Msa0199050:intron 15.0%
!! ATATATTGATAAATATTGGA+TGG - chr2_1:17922516-17922535 Msa0199050:intron 15.0%
!! TTTCTTAATAGAAATAACAA+GGG - chr2_1:17922655-17922674 Msa0199050:intron 15.0%
!!! AGATATTGATTATAGAATTA+GGG + chr2_1:17923220-17923239 None:intergenic 15.0%
!!! AAGATATTGATTATAGAATT+AGG + chr2_1:17923221-17923240 None:intergenic 15.0%
!! TTCTATAATCAATATCTTAA+TGG - chr2_1:17923223-17923242 Msa0199050:CDS 15.0%
!!! AACATTCTGTATGTTTTTTT+AGG - chr2_1:17918526-17918545 Msa0199050:intron 20.0%
!! TAATTTAGCATACAAACAAT+GGG + chr2_1:17919909-17919928 None:intergenic 20.0%
!! ATAATTTAGCATACAAACAA+TGG + chr2_1:17919910-17919929 None:intergenic 20.0%
!! ATTGTTTGTATGCTAAATTA+TGG - chr2_1:17919909-17919928 Msa0199050:intron 20.0%
!! ATAAGAGAATAAAATAACAG+AGG - chr2_1:17920389-17920408 Msa0199050:intron 20.0%
!! GAAAAAAGAATCACAAATTA+TGG - chr2_1:17920457-17920476 Msa0199050:intron 20.0%
!! AAAAAGGAAAAAAGAGAAAA+TGG - chr2_1:17920516-17920535 Msa0199050:intron 20.0%
!! TTTAAATAACTCATCAATCT+CGG + chr2_1:17921518-17921537 None:intergenic 20.0%
!!! AACAAATTTTATATGTCAAC+TGG + chr2_1:17921923-17921942 None:intergenic 20.0%
!!! TTCTTTTTATGAAGAATCTT+GGG - chr2_1:17922046-17922065 Msa0199050:CDS 20.0%
!!! TTATTTTGTTCTTAATTAGG+AGG - chr2_1:17922433-17922452 Msa0199050:intron 20.0%
!!! TGGTACTTTTTTTTTTTTGA+AGG - chr2_1:17922572-17922591 Msa0199050:intron 20.0%
!! GTTTCTTAATAGAAATAACA+AGG - chr2_1:17922654-17922673 Msa0199050:intron 20.0%
!! GAGGATTAAAATTAATACAT+GGG + chr2_1:17922967-17922986 None:intergenic 20.0%
!! AGAGGATTAAAATTAATACA+TGG + chr2_1:17922968-17922987 None:intergenic 20.0%
!! CAATTTCCATTAAATTTCTT+TGG - chr2_1:17923071-17923090 Msa0199050:intron 20.0%
!! AATCAATATCTTAATGGTAA+AGG - chr2_1:17923229-17923248 Msa0199050:CDS 20.0%
!! GACAAAATATTAAATATGAC+AGG + chr2_1:17923345-17923364 None:intergenic 20.0%
! AGAAACCAAAAAGAAAACAA+CGG - chr2_1:17917698-17917717 Msa0199050:three_prime_UTR 25.0%
! AAATTGAAGATCTGAGAAAA+TGG + chr2_1:17917785-17917804 None:intergenic 25.0%
! ATTTGTTTGACATAGTCAAT+TGG - chr2_1:17918207-17918226 Msa0199050:intron 25.0%
!! TATGTGAAGTTAATTTTCTG+CGG - chr2_1:17918278-17918297 Msa0199050:intron 25.0%
! TAAAATCATAGAGAACTTTC+CGG + chr2_1:17918337-17918356 None:intergenic 25.0%
!!! GTGTTATTTTTTTGGTGAAT+TGG - chr2_1:17918357-17918376 Msa0199050:intron 25.0%
! TAGAATCAAACTATCAAAAC+AGG + chr2_1:17918692-17918711 None:intergenic 25.0%
! GATTCTATTCAGTTAATGTT+TGG - chr2_1:17918705-17918724 Msa0199050:intron 25.0%
! GTAATTCAATCCTTTCTTTA+TGG + chr2_1:17918973-17918992 None:intergenic 25.0%
!! TGGTTTGGCAATAAATATTA+TGG - chr2_1:17919351-17919370 Msa0199050:intron 25.0%
! CATTGTCTAAATTAGATTTG+TGG + chr2_1:17919395-17919414 None:intergenic 25.0%
! ATTTGTATATACCTGCAATT+TGG + chr2_1:17919473-17919492 None:intergenic 25.0%
!!! ACAACTTGCTATATAAATAG+AGG + chr2_1:17919646-17919665 None:intergenic 25.0%
!! TTTGCTTATTTCTTTGGTTA+TGG - chr2_1:17919768-17919787 Msa0199050:CDS 25.0%
! CTTTATTAACATTAATGACG+TGG + chr2_1:17919821-17919840 None:intergenic 25.0%
! CATACATAACTAAATACACA+TGG + chr2_1:17919850-17919869 None:intergenic 25.0%
! ACATAATTAGTGTACAGAAA+GGG - chr2_1:17920483-17920502 Msa0199050:intron 25.0%
!! GTTGTCATTTAACAATGAAT+GGG - chr2_1:17920935-17920954 Msa0199050:intron 25.0%
! ATGCCAGATTATATAATGAT+GGG + chr2_1:17921021-17921040 None:intergenic 25.0%
! AATGCCAGATTATATAATGA+TGG + chr2_1:17921022-17921041 None:intergenic 25.0%
! GATAAATACATATGTTCTCT+AGG + chr2_1:17921229-17921248 None:intergenic 25.0%
! AAATAAACTAAGAGCAGATT+AGG - chr2_1:17921268-17921287 Msa0199050:intron 25.0%
! ACATATAAAATCTTGTGGAA+AGG - chr2_1:17921294-17921313 Msa0199050:intron 25.0%
!!! CAACTAATTGAATTTTGAGA+TGG - chr2_1:17921763-17921782 Msa0199050:intron 25.0%
! AACTGGAAAATCTAAATTCA+TGG + chr2_1:17921906-17921925 None:intergenic 25.0%
!! GTTCTTTTTATGAAGAATCT+TGG - chr2_1:17922045-17922064 Msa0199050:CDS 25.0%
!!! GGAAATGTTGATTTAAAATC+AGG + chr2_1:17922112-17922131 None:intergenic 25.0%
!! ATTTTAAATCAACATTTCCC+AGG - chr2_1:17922113-17922132 Msa0199050:intron 25.0%
! TGCTTCTAAATATATTTCTC+TGG + chr2_1:17922493-17922512 None:intergenic 25.0%
!!! TTTTTTGAAGGAAGAAAACA+TGG - chr2_1:17922584-17922603 Msa0199050:intron 25.0%
! TTCAATGCAAAAGCAATTAA+AGG - chr2_1:17922786-17922805 Msa0199050:intron 25.0%
! TCAATGCAAAAGCAATTAAA+GGG - chr2_1:17922787-17922806 Msa0199050:intron 25.0%
!! CTATTTCATTGTTTGATAAC+TGG + chr2_1:17922942-17922961 None:intergenic 25.0%
!! GTTGAATCTGAAATATTTGT+AGG + chr2_1:17923367-17923386 None:intergenic 25.0%
! TCTTGCAATAATATACGTAT+TGG + chr2_1:17923491-17923510 None:intergenic 25.0%
GAAACCAAAAAGAAAACAAC+GGG - chr2_1:17917699-17917718 Msa0199050:three_prime_UTR 30.0%
! ATGGAGAGAAAGGTATATAA+AGG + chr2_1:17917766-17917785 None:intergenic 30.0%
AGATGTTTGAATTTGTGTGT+CGG - chr2_1:17918302-17918321 Msa0199050:intron 30.0%
TTTGATGTCTAGTGTAATGT+TGG - chr2_1:17918389-17918408 Msa0199050:intron 30.0%
TCAGTTAATGTTTGGTAAAC+TGG - chr2_1:17918713-17918732 Msa0199050:intron 30.0%
! ACTGGTAGTGTTATTGATAA+AGG - chr2_1:17918731-17918750 Msa0199050:intron 30.0%
! CTGGTAGTGTTATTGATAAA+GGG - chr2_1:17918732-17918751 Msa0199050:intron 30.0%
!! GTTCTAAAGTACTCATTTGA+TGG - chr2_1:17918754-17918773 Msa0199050:intron 30.0%
AGCATATCTTGATAAGGAAA+TGG + chr2_1:17919088-17919107 None:intergenic 30.0%
TTTCCTTATCAAGATATGCT+TGG - chr2_1:17919088-17919107 Msa0199050:CDS 30.0%
GTGATCTTAAAATAACAGAG+AGG + chr2_1:17919284-17919303 None:intergenic 30.0%
GTCTAAATTAGATTTGTGGA+AGG + chr2_1:17919391-17919410 None:intergenic 30.0%
AATGATGATAAGCTTATGCT+TGG - chr2_1:17919428-17919447 Msa0199050:intron 30.0%
!! TTTAGTGGGTTACAGTTAAT+TGG - chr2_1:17919530-17919549 Msa0199050:intron 30.0%
!! TTGACCTATAGCATTTTGAT+TGG - chr2_1:17919614-17919633 Msa0199050:intron 30.0%
CAAAGAAATAAGCAAAGCAA+TGG + chr2_1:17919764-17919783 None:intergenic 30.0%
! CATTGCTTTGCTTATTTCTT+TGG - chr2_1:17919762-17919781 Msa0199050:CDS 30.0%
CAAGCTTAAGTGAATTAGTA+CGG + chr2_1:17920149-17920168 None:intergenic 30.0%
GACATAATTAGTGTACAGAA+AGG - chr2_1:17920482-17920501 Msa0199050:intron 30.0%
AAATAAATAGGGACAATGAG+AGG - chr2_1:17920565-17920584 Msa0199050:intron 30.0%
TCATTGTTAAATGACAACCA+TGG + chr2_1:17920933-17920952 None:intergenic 30.0%
! GGTTGTCATTTAACAATGAA+TGG - chr2_1:17920934-17920953 Msa0199050:intron 30.0%
TAACAATGAATGGGAAACAT+TGG - chr2_1:17920944-17920963 Msa0199050:intron 30.0%
AACAATGAATGGGAAACATT+GGG - chr2_1:17920945-17920964 Msa0199050:intron 30.0%
TTGCCCATCATTATATAATC+TGG - chr2_1:17921015-17921034 Msa0199050:intron 30.0%
! TATAATCTGGCATTGAAGAT+TGG - chr2_1:17921028-17921047 Msa0199050:intron 30.0%
GGAAATAAACTCAAGTCATT+TGG + chr2_1:17921088-17921107 None:intergenic 30.0%
TAGATACAAGAATTAGTGAG+GGG + chr2_1:17921158-17921177 None:intergenic 30.0%
CTAGATACAAGAATTAGTGA+GGG + chr2_1:17921159-17921178 None:intergenic 30.0%
TCTCTAGGTTACTAAAGTTT+GGG + chr2_1:17921214-17921233 None:intergenic 30.0%
TTCTCTAGGTTACTAAAGTT+TGG + chr2_1:17921215-17921234 None:intergenic 30.0%
GGAGTACATATAAAATCTTG+TGG - chr2_1:17921289-17921308 Msa0199050:intron 30.0%
! GTGAATATCTTTATTTCCGT+AGG - chr2_1:17921546-17921565 Msa0199050:intron 30.0%
ATAGCAAAGGAGTTCTTAAT+GGG - chr2_1:17921849-17921868 Msa0199050:intron 30.0%
TATTTGAAAAACGGTACCAT+AGG - chr2_1:17921948-17921967 Msa0199050:intron 30.0%
!!! AGCAAAGAGTATTTTTCCTA+TGG + chr2_1:17921967-17921986 None:intergenic 30.0%
AATACTCTTTGCTTTCTAAC+AGG - chr2_1:17921974-17921993 Msa0199050:CDS 30.0%
ATACTCTTTGCTTTCTAACA+GGG - chr2_1:17921975-17921994 Msa0199050:CDS 30.0%
AGACATTTACTTACCTTAGA+TGG + chr2_1:17922142-17922161 None:intergenic 30.0%
GTTTGTTTATCCCAATAACA+AGG + chr2_1:17922407-17922426 None:intergenic 30.0%
TTTCTAAGCTATGATCAGTA+AGG + chr2_1:17922549-17922568 None:intergenic 30.0%
TGATCATAGCTTAGAAAACA+TGG - chr2_1:17922552-17922571 Msa0199050:intron 30.0%
ACAAGTGTTCAAAAAAGACA+CGG + chr2_1:17922837-17922856 None:intergenic 30.0%
AGAGAAAAAAACTGATAGAG+AGG + chr2_1:17922986-17923005 None:intergenic 30.0%
TCAGCACCAAAGAAATTTAA+TGG + chr2_1:17923080-17923099 None:intergenic 30.0%
AGCAATATGTGCAGAATTTA+TGG - chr2_1:17923259-17923278 Msa0199050:intron 30.0%
!!! ATTTTGATTGTGCCAGAAAT+GGG - chr2_1:17923282-17923301 Msa0199050:intron 30.0%
AAAAATAACACACCCATTTC+TGG + chr2_1:17923297-17923316 None:intergenic 30.0%
ATTAAATATGACAGGATCCT+AGG + chr2_1:17923337-17923356 None:intergenic 30.0%
ATCTGAGAAAATGGAGAGAA+AGG + chr2_1:17917776-17917795 None:intergenic 35.0%
!!! GTCATTTTTCTTCTTCACGA+TGG - chr2_1:17917837-17917856 Msa0199050:three_prime_UTR 35.0%
! TTCGATTTTGCAGTACGAAA+AGG - chr2_1:17917940-17917959 Msa0199050:three_prime_UTR 35.0%
AAGATTGGTGAAGGAACATA+CGG - chr2_1:17917968-17917987 Msa0199050:three_prime_UTR 35.0%
TGCTTAAAGAAATGCAGCAT+AGG - chr2_1:17918104-17918123 Msa0199050:intron 35.0%
CTAATCACACATATGCACAA+TGG + chr2_1:17918569-17918588 None:intergenic 35.0%
!! ATTTTGTCGATGTTTGTTGC+CGG - chr2_1:17918614-17918633 Msa0199050:intron 35.0%
CAACCAATCCTTATCTTGTT+TGG - chr2_1:17918637-17918656 Msa0199050:intron 35.0%
! CAATCCTTATCTTGTTTGGT+GGG - chr2_1:17918641-17918660 Msa0199050:intron 35.0%
! AATCCTTATCTTGTTTGGTG+GGG - chr2_1:17918642-17918661 Msa0199050:intron 35.0%
!! ATGCTCTTTGTTGTTCATCA+AGG - chr2_1:17918782-17918801 Msa0199050:intron 35.0%
! CATCAAGGTGAGATGATTTT+AGG - chr2_1:17918797-17918816 Msa0199050:intron 35.0%
AGCTTGTATAACAGCTAAGA+GGG + chr2_1:17918911-17918930 None:intergenic 35.0%
AAGCTTGTATAACAGCTAAG+AGG + chr2_1:17918912-17918931 None:intergenic 35.0%
TGTTATACAAGCTTTCCCTA+AGG - chr2_1:17918918-17918937 Msa0199050:intron 35.0%
GCAACTTATGCCATAAAGAA+AGG - chr2_1:17918960-17918979 Msa0199050:CDS 35.0%
!!! GTATCTGGTTTTTGAGTATC+TGG - chr2_1:17919162-17919181 Msa0199050:intron 35.0%
! CTTAGATCTGAAGAAGCATA+TGG - chr2_1:17919186-17919205 Msa0199050:intron 35.0%
! GAAAGAGTGTGCAAAAAATC+TGG - chr2_1:17919331-17919350 Msa0199050:intron 35.0%
AGTGTGCAAAAAATCTGGTT+TGG - chr2_1:17919336-17919355 Msa0199050:intron 35.0%
ATGCTTGGCAACAAATAGTT+TGG - chr2_1:17919443-17919462 Msa0199050:intron 35.0%
CCAGAAACAGGAAAATTATC+AGG + chr2_1:17919570-17919589 None:intergenic 35.0%
! CCTGATAATTTTCCTGTTTC+TGG - chr2_1:17919567-17919586 Msa0199050:intron 35.0%
CATCATTTAGATCCAGAAAC+AGG + chr2_1:17919582-17919601 None:intergenic 35.0%
AGCTCCAATCAAAATGCTAT+AGG + chr2_1:17919621-17919640 None:intergenic 35.0%
TAGCATACAAACAATGGGAA+GGG + chr2_1:17919904-17919923 None:intergenic 35.0%
TTAGCATACAAACAATGGGA+AGG + chr2_1:17919905-17919924 None:intergenic 35.0%
AATTCAGACTCCAAACTAAC+TGG + chr2_1:17920012-17920031 None:intergenic 35.0%
TGATAAAGGAACATCTGCAA+AGG + chr2_1:17920045-17920064 None:intergenic 35.0%
TTCCTTTATCAAATGCTCTG+TGG - chr2_1:17920054-17920073 Msa0199050:intron 35.0%
! TTCCACAGAGCATTTGATAA+AGG + chr2_1:17920059-17920078 None:intergenic 35.0%
CGATCTATCAACAAATTCTG+TGG + chr2_1:17920126-17920145 None:intergenic 35.0%
TCATGTGTAAATGTTCTGAC+AGG + chr2_1:17920204-17920223 None:intergenic 35.0%
TGTCAGAACATTTACACATG+AGG - chr2_1:17920203-17920222 Msa0199050:intron 35.0%
CTATACTCCTTTCGTAAGTT+TGG + chr2_1:17920276-17920295 None:intergenic 35.0%
AGAGGTGATAATAGAGAGAA+TGG - chr2_1:17920583-17920602 Msa0199050:intron 35.0%
GGAGTAACCAAAATGAGTTA+CGG - chr2_1:17920670-17920689 Msa0199050:intron 35.0%
ATCTGACAAACCCAAAACAA+AGG + chr2_1:17920892-17920911 None:intergenic 35.0%
AAATGACAACCATGGAAGAA+TGG + chr2_1:17920925-17920944 None:intergenic 35.0%
!! TAATGATGGGCAATGATACA+TGG + chr2_1:17921008-17921027 None:intergenic 35.0%
GCTAGATACAAGAATTAGTG+AGG + chr2_1:17921160-17921179 None:intergenic 35.0%
CTCTAGGTTACTAAAGTTTG+GGG + chr2_1:17921213-17921232 None:intergenic 35.0%
!! TGGAAAGGTGTTATTGAAGA+TGG - chr2_1:17921309-17921328 Msa0199050:intron 35.0%
! CGTCATTGATGATTGTTTGT+AGG - chr2_1:17921360-17921379 Msa0199050:intron 35.0%
TATTTGCAGAGATGGCAAAT+CGG - chr2_1:17921470-17921489 Msa0199050:intron 35.0%
TCCATGTTGATACCATTTGA+TGG - chr2_1:17921714-17921733 Msa0199050:intron 35.0%
TCCATCAAATGGTATCAACA+TGG + chr2_1:17921718-17921737 None:intergenic 35.0%
AAAGGATCATGTCCATCAAA+TGG + chr2_1:17921729-17921748 None:intergenic 35.0%
GTTGTGAAACTAGCATTCAA+AGG + chr2_1:17921747-17921766 None:intergenic 35.0%
AGAAAGGCTAAACTAAAGCA+GGG + chr2_1:17921812-17921831 None:intergenic 35.0%
CATTTCAGTCAGTAAGAGAA+AGG + chr2_1:17921828-17921847 None:intergenic 35.0%
! CTTTCTCTTACTGACTGAAA+TGG - chr2_1:17921826-17921845 Msa0199050:intron 35.0%
GATAGCAAAGGAGTTCTTAA+TGG - chr2_1:17921848-17921867 Msa0199050:intron 35.0%
TAGCAAAGGAGTTCTTAATG+GGG - chr2_1:17921850-17921869 Msa0199050:intron 35.0%
GTACACCAAATGAAGATACA+TGG - chr2_1:17922068-17922087 Msa0199050:CDS 35.0%
TTAAATCAACATTTCCCAGG+TGG - chr2_1:17922116-17922135 Msa0199050:intron 35.0%
GATCACATCAATTCAGATCA+AGG + chr2_1:17922171-17922190 None:intergenic 35.0%
AACCTTATCTTGAACTTTGC+AGG - chr2_1:17922210-17922229 Msa0199050:intron 35.0%
AATAACAAGGATTCAGACTG+AGG + chr2_1:17922394-17922413 None:intergenic 35.0%
! TCAGTCTGAATCCTTGTTAT+TGG - chr2_1:17922393-17922412 Msa0199050:intron 35.0%
!! CAGTCTGAATCCTTGTTATT+GGG - chr2_1:17922394-17922413 Msa0199050:intron 35.0%
!!! TCTTTTTTTGGTGATTGACG+TGG - chr2_1:17922712-17922731 Msa0199050:intron 35.0%
!!! GATTTTGATTGTGCCAGAAA+TGG - chr2_1:17923281-17923300 Msa0199050:intron 35.0%
TCAGACTTGCACAAAAAAGA+AGG + chr2_1:17923407-17923426 None:intergenic 35.0%
!!! CTTTTTTGTGCAAGTCTGAA+TGG - chr2_1:17923408-17923427 Msa0199050:five_prime_UTR 35.0%
AAGTCTGAATGGCAATATAC+AGG - chr2_1:17923419-17923438 Msa0199050:five_prime_UTR 35.0%
!! CTCTCCCGTTGTTTTCTTTT+TGG + chr2_1:17917706-17917725 None:intergenic 40.0%
! GATTTTGCAGTACGAAAAGG+TGG - chr2_1:17917943-17917962 Msa0199050:three_prime_UTR 40.0%
TACGAAAAGGTGGAGAAGAT+TGG - chr2_1:17917953-17917972 Msa0199050:three_prime_UTR 40.0%
CGATGGTTTCATTCGTAACA+CGG + chr2_1:17918015-17918034 None:intergenic 40.0%
! GAAGAAGATTCGACTTGAAC+AGG - chr2_1:17918039-17918058 Msa0199050:CDS 40.0%
ATCACACATATGCACAATGG+CGG + chr2_1:17918566-17918585 None:intergenic 40.0%
!! ACAAGATAAGGATTGGTTGC+CGG + chr2_1:17918636-17918655 None:intergenic 40.0%
CCACCAAACAAGATAAGGAT+TGG + chr2_1:17918643-17918662 None:intergenic 40.0%
! CCAATCCTTATCTTGTTTGG+TGG - chr2_1:17918640-17918659 Msa0199050:intron 40.0%
CACAGCAAAAACATGCCTTA+GGG + chr2_1:17918936-17918955 None:intergenic 40.0%
ACACAGCAAAAACATGCCTT+AGG + chr2_1:17918937-17918956 None:intergenic 40.0%
CCACCAAGCATATCTTGATA+AGG + chr2_1:17919094-17919113 None:intergenic 40.0%
CCTTATCAAGATATGCTTGG+TGG - chr2_1:17919091-17919110 Msa0199050:CDS 40.0%
! CGCGGATCTTTTATAAACTC+AGG + chr2_1:17919220-17919239 None:intergenic 40.0%
!! TCACTCACTTTTACTTGTCG+CGG + chr2_1:17919238-17919257 None:intergenic 40.0%
TGACGAATTGCAGAGTTTAG+TGG - chr2_1:17919515-17919534 Msa0199050:intron 40.0%
GACGAATTGCAGAGTTTAGT+GGG - chr2_1:17919516-17919535 Msa0199050:intron 40.0%
!! GTCGACTTGAACAAACACAA+TGG + chr2_1:17919705-17919724 None:intergenic 40.0%
GTGAACTTGACCAGTTAGTT+TGG - chr2_1:17919999-17920018 Msa0199050:intron 40.0%
!!! TCACTTAAGCTTGCCGATTT+TGG - chr2_1:17920156-17920175 Msa0199050:intron 40.0%
!!! TAAGCTTGCCGATTTTGGAT+TGG - chr2_1:17920161-17920180 Msa0199050:intron 40.0%
AGCGACTAGAAGCAGATATA+AGG + chr2_1:17920240-17920259 None:intergenic 40.0%
CGTAACACCAAACTTACGAA+AGG - chr2_1:17920266-17920285 Msa0199050:intron 40.0%
TCTCTAATTAGAGCAAGAGG+AGG + chr2_1:17920319-17920338 None:intergenic 40.0%
TCCTCTTGCTCTAATTAGAG+AGG - chr2_1:17920318-17920337 Msa0199050:intron 40.0%
TCCTCTCTAATTAGAGCAAG+AGG + chr2_1:17920322-17920341 None:intergenic 40.0%
TTAGTGTACAGAAAGGGATG+AGG - chr2_1:17920489-17920508 Msa0199050:intron 40.0%
AAAGGGATGAGGTCAGAAAA+AGG - chr2_1:17920500-17920519 Msa0199050:intron 40.0%
GGTGATAATAGAGAGAATGG+AGG - chr2_1:17920586-17920605 Msa0199050:intron 40.0%
GTAACCAAAATGAGTTACGG+AGG - chr2_1:17920673-17920692 Msa0199050:intron 40.0%
GTTTCAAACTCTCGTGTCAT+GGG - chr2_1:17920717-17920736 Msa0199050:intron 40.0%
AGAGAGCTGGATTCAATTGA+TGG + chr2_1:17920749-17920768 None:intergenic 40.0%
AACAGAAAGAGAAAGAGAGC+TGG + chr2_1:17920762-17920781 None:intergenic 40.0%
GGAAATGGTTGAGAAACCAA+GGG + chr2_1:17920793-17920812 None:intergenic 40.0%
!!! CACAGCATAGCCTTTGTTTT+GGG - chr2_1:17920879-17920898 Msa0199050:intron 40.0%
ACAACCATGGAAGAATGGAA+TGG + chr2_1:17920920-17920939 None:intergenic 40.0%
AGCAATGAAGGATCACTACT+AGG + chr2_1:17921109-17921128 None:intergenic 40.0%
AGTAGTGATCCTTCATTGCT+AGG - chr2_1:17921109-17921128 Msa0199050:intron 40.0%
GTAGTGATCCTTCATTGCTA+GGG - chr2_1:17921110-17921129 Msa0199050:intron 40.0%
GTTTGTAGGTAGTTACACTG+TGG - chr2_1:17921374-17921393 Msa0199050:intron 40.0%
CGAGATCCAAGCAATATTTC+CGG + chr2_1:17921409-17921428 None:intergenic 40.0%
! ATTCTACCCCAGTTGATGTT+TGG - chr2_1:17921434-17921453 Msa0199050:intron 40.0%
GGGATGTATATTTGCAGAGA+TGG - chr2_1:17921462-17921481 Msa0199050:intron 40.0%
! ACCAAGAAGTACAAGTCCTA+CGG + chr2_1:17921565-17921584 None:intergenic 40.0%
CAGGGGAAATAGCAAAAAGA+AGG + chr2_1:17921794-17921813 None:intergenic 40.0%
GAAAGGCTAAACTAAAGCAG+GGG + chr2_1:17921811-17921830 None:intergenic 40.0%
GAGAAAGGCTAAACTAAAGC+AGG + chr2_1:17921813-17921832 None:intergenic 40.0%
CTGACTGAAATGGATAGCAA+AGG - chr2_1:17921836-17921855 Msa0199050:intron 40.0%
GTCCTGCAAAGTTCAAGATA+AGG + chr2_1:17922215-17922234 None:intergenic 40.0%
TTAAGAAGATCAAGACCAGC+TGG + chr2_1:17922265-17922284 None:intergenic 40.0%
GTTTATACCTCGATTGTTGC+CGG - chr2_1:17922348-17922367 Msa0199050:intron 40.0%
CAAAAAAGACACGGCAATTG+AGG + chr2_1:17922828-17922847 None:intergenic 40.0%
CTAATTATCCCACCATACAG+AGG + chr2_1:17922897-17922916 None:intergenic 40.0%
! CTGGCAGTAATTCTTTTGGT+GGG + chr2_1:17923154-17923173 None:intergenic 40.0%
! GCTACTTTCTTCAAAGACCT+AGG - chr2_1:17923317-17923336 Msa0199050:intron 40.0%
AAGGTGGAGAAGATTGGTGA+AGG - chr2_1:17917959-17917978 Msa0199050:three_prime_UTR 45.0%
AACATACGGCGTCGTTTACA+AGG - chr2_1:17917982-17918001 Msa0199050:exon 45.0%
TCGAATCTTCTTCAACGCGA+TGG + chr2_1:17918032-17918051 None:intergenic 45.0%
CGACTTGAACAGGAAGATGA+AGG - chr2_1:17918049-17918068 Msa0199050:CDS 45.0%
AAGCAGCGAAATCTCACGAA+TGG + chr2_1:17918089-17918108 None:intergenic 45.0%
TGCAGCATAGGAACATCGTT+AGG - chr2_1:17918116-17918135 Msa0199050:intron 45.0%
CAACCCCACCAAACAAGATA+AGG + chr2_1:17918648-17918667 None:intergenic 45.0%
! CTTATCTTGTTTGGTGGGGT+TGG - chr2_1:17918646-17918665 Msa0199050:intron 45.0%
CAGTGACAAGCGATTGTATC+TGG - chr2_1:17919147-17919166 Msa0199050:intron 45.0%
!! AGTTTGGCTTGCCAAATTGC+AGG - chr2_1:17919459-17919478 Msa0199050:intron 45.0%
GTGTTTGTTCAAGTCGACGT+AGG - chr2_1:17919707-17919726 Msa0199050:CDS 45.0%
TTGTTCAAGTCGACGTAGGA+TGG - chr2_1:17919711-17919730 Msa0199050:CDS 45.0%
AGTTGAGCAGGCGATATGAA+GGG + chr2_1:17919797-17919816 None:intergenic 45.0%
AAGCAAAGGAAAGGAGTGGT+AGG + chr2_1:17919881-17919900 None:intergenic 45.0%
AACAATGGGAAGGGAAGCAA+AGG + chr2_1:17919895-17919914 None:intergenic 45.0%
GCTCTAATTAGAGAGGAGTC+AGG - chr2_1:17920325-17920344 Msa0199050:intron 45.0%
CAGAGGTAAAAGACGACACA+TGG - chr2_1:17920406-17920425 Msa0199050:intron 45.0%
GACGACACATGGAAACAAGA+AGG - chr2_1:17920417-17920436 Msa0199050:intron 45.0%
AGGAACGACCTGAATGGAAA+TGG - chr2_1:17920648-17920667 Msa0199050:intron 45.0%
GGAACGACCTGAATGGAAAT+GGG - chr2_1:17920649-17920668 Msa0199050:intron 45.0%
GGTTACTCCCATTTCCATTC+AGG + chr2_1:17920659-17920678 None:intergenic 45.0%
! TTTGAAACCCAGAAGCACAG+AGG + chr2_1:17920705-17920724 None:intergenic 45.0%
GGTTTCAAACTCTCGTGTCA+TGG - chr2_1:17920716-17920735 Msa0199050:intron 45.0%
ATGGTTGAGAAACCAAGGGA+GGG + chr2_1:17920789-17920808 None:intergenic 45.0%
AATGGTTGAGAAACCAAGGG+AGG + chr2_1:17920790-17920809 None:intergenic 45.0%
GGGAAATGGTTGAGAAACCA+AGG + chr2_1:17920794-17920813 None:intergenic 45.0%
ATTTCCCTGAGTTGTGCCTT+GGG - chr2_1:17920807-17920826 Msa0199050:intron 45.0%
! TGGTTTTCATGTGGAGGTCA+TGG + chr2_1:17920853-17920872 None:intergenic 45.0%
CCAAAACAAAGGCTATGCTG+TGG + chr2_1:17920881-17920900 None:intergenic 45.0%
!! CCACAGCATAGCCTTTGTTT+TGG - chr2_1:17920878-17920897 Msa0199050:intron 45.0%
ACCATGGAAGAATGGAATGG+CGG + chr2_1:17920917-17920936 None:intergenic 45.0%
TGGGAATGCTGAATGATCGT+TGG - chr2_1:17920964-17920983 Msa0199050:intron 45.0%
ACAGATGACCCTAGCAATGA+AGG + chr2_1:17921121-17921140 None:intergenic 45.0%
ATCTAGCCTCAACCTTTGCA+CGG - chr2_1:17921173-17921192 Msa0199050:intron 45.0%
! GTTACTAAAGTTTGGGGCAG+GGG + chr2_1:17921207-17921226 None:intergenic 45.0%
! GGTTACTAAAGTTTGGGGCA+GGG + chr2_1:17921208-17921227 None:intergenic 45.0%
! AGGTTACTAAAGTTTGGGGC+AGG + chr2_1:17921209-17921228 None:intergenic 45.0%
CAAGCAATATTTCCGGAGCT+CGG + chr2_1:17921402-17921421 None:intergenic 45.0%
CACTGACCAAACATCAACTG+GGG + chr2_1:17921443-17921462 None:intergenic 45.0%
CCACTGACCAAACATCAACT+GGG + chr2_1:17921444-17921463 None:intergenic 45.0%
! CCAGTTGATGTTTGGTCAGT+GGG - chr2_1:17921442-17921461 Msa0199050:intron 45.0%
TCCGTAGGACTTGTACTTCT+TGG - chr2_1:17921561-17921580 Msa0199050:intron 45.0%
CCTGGCCATGTATCTTCATT+TGG + chr2_1:17922076-17922095 None:intergenic 45.0%
CCAAATGAAGATACATGGCC+AGG - chr2_1:17922073-17922092 Msa0199050:CDS 45.0%
TCAGGCAATGAAGTTACTCC+TGG + chr2_1:17922094-17922113 None:intergenic 45.0%
! TGGCTCAAGATTTGGAACCA+CGG + chr2_1:17922245-17922264 None:intergenic 45.0%
TGGTTTACGCATCCTCTGTA+TGG - chr2_1:17922882-17922901 Msa0199050:intron 45.0%
TTTACGCATCCTCTGTATGG+TGG - chr2_1:17922885-17922904 Msa0199050:intron 45.0%
TTACGCATCCTCTGTATGGT+GGG - chr2_1:17922886-17922905 Msa0199050:intron 45.0%
ATTCCAGAGCATGCTTTGCT+TGG - chr2_1:17923126-17923145 Msa0199050:CDS 45.0%
! CCTGGCAGTAATTCTTTTGG+TGG + chr2_1:17923155-17923174 None:intergenic 45.0%
CCACCAAAAGAATTACTGCC+AGG - chr2_1:17923152-17923171 Msa0199050:CDS 45.0%
! GCTCCTGGCAGTAATTCTTT+TGG + chr2_1:17923158-17923177 None:intergenic 45.0%
!! AAAAATATATTGATAAATAT+TGG - chr2_1:17922512-17922531 Msa0199050:intron 5.0%
CAGCGAAATCTCACGAATGG+CGG + chr2_1:17918086-17918105 None:intergenic 50.0%
TTTGGTGGGGTTGGATGCAT+GGG - chr2_1:17918655-17918674 Msa0199050:intron 50.0%
! TTGGTGGTTGTGTGCATGAC+AGG - chr2_1:17919107-17919126 Msa0199050:CDS 50.0%
TTGTGTGCATGACAGGTTGC+AGG - chr2_1:17919114-17919133 Msa0199050:CDS 50.0%
CAGTTGAGCAGGCGATATGA+AGG + chr2_1:17919798-17919817 None:intergenic 50.0%
TAATGACGTGGCAGTTGAGC+AGG + chr2_1:17919809-17919828 None:intergenic 50.0%
AGGGAAGCAAAGGAAAGGAG+TGG + chr2_1:17919885-17919904 None:intergenic 50.0%
TGGGAAGGGAAGCAAAGGAA+AGG + chr2_1:17919890-17919909 None:intergenic 50.0%
!!! TTGCCGATTTTGGATTGGCC+AGG - chr2_1:17920166-17920185 Msa0199050:intron 50.0%
!!! TGCCGATTTTGGATTGGCCA+GGG - chr2_1:17920167-17920186 Msa0199050:intron 50.0%
TGCCCTGGCCAATCCAAAAT+CGG + chr2_1:17920172-17920191 None:intergenic 50.0%
!! TTTGGATTGGCCAGGGCATT+TGG - chr2_1:17920174-17920193 Msa0199050:intron 50.0%
GACAGGAATACCAAATGCCC+TGG + chr2_1:17920187-17920206 None:intergenic 50.0%
TGGATGAGGAACGACCTGAA+TGG - chr2_1:17920642-17920661 Msa0199050:intron 50.0%
! TCGGCCTCCGTAACTCATTT+TGG + chr2_1:17920680-17920699 None:intergenic 50.0%
TGGTTGAGAAACCAAGGGAG+GGG + chr2_1:17920788-17920807 None:intergenic 50.0%
CAAGGCACAACTCAGGGAAA+TGG + chr2_1:17920808-17920827 None:intergenic 50.0%
CATTTCCCTGAGTTGTGCCT+TGG - chr2_1:17920806-17920825 Msa0199050:intron 50.0%
TGCCTTGGGTACCATGAGAA+TGG - chr2_1:17920821-17920840 Msa0199050:intron 50.0%
CACCATTCTCATGGTACCCA+AGG + chr2_1:17920826-17920845 None:intergenic 50.0%
CTTGGGTACCATGAGAATGG+TGG - chr2_1:17920824-17920843 Msa0199050:intron 50.0%
CATGGAAGCCACCATTCTCA+TGG + chr2_1:17920835-17920854 None:intergenic 50.0%
! GCATGGTGGTTTTCATGTGG+AGG + chr2_1:17920859-17920878 None:intergenic 50.0%
! GTGGCATGGTGGTTTTCATG+TGG + chr2_1:17920862-17920881 None:intergenic 50.0%
ACAAAGGCTATGCTGTGGCA+TGG + chr2_1:17920876-17920895 None:intergenic 50.0%
TCCGCCATTCCATTCTTCCA+TGG - chr2_1:17920913-17920932 Msa0199050:intron 50.0%
TCTAGCCTCAACCTTTGCAC+GGG - chr2_1:17921174-17921193 Msa0199050:intron 50.0%
! GTTTTCCCGTGCAAAGGTTG+AGG + chr2_1:17921182-17921201 None:intergenic 50.0%
CGAGCTCCGGAAATATTGCT+TGG - chr2_1:17921400-17921419 Msa0199050:intron 50.0%
! CCCAGTTGATGTTTGGTCAG+TGG - chr2_1:17921441-17921460 Msa0199050:intron 50.0%
CCCACTGACCAAACATCAAC+TGG + chr2_1:17921445-17921464 None:intergenic 50.0%
CATCAATCTCGGAATCCCCA+GGG + chr2_1:17921507-17921526 None:intergenic 50.0%
TCATCAATCTCGGAATCCCC+AGG + chr2_1:17921508-17921527 None:intergenic 50.0%
ATTTCCCAGGTGGCCATCTA+AGG - chr2_1:17922126-17922145 Msa0199050:intron 50.0%
CTTACCTTAGATGGCCACCT+GGG + chr2_1:17922133-17922152 None:intergenic 50.0%
ACTTACCTTAGATGGCCACC+TGG + chr2_1:17922134-17922153 None:intergenic 50.0%
! GATTTGGAACCACGGTTGCT+AGG + chr2_1:17922237-17922256 None:intergenic 50.0%
GTTCCAAATCTTGAGCCAGC+TGG - chr2_1:17922247-17922266 Msa0199050:intron 50.0%
! AGACCAGCTGGCTCAAGATT+TGG + chr2_1:17922253-17922272 None:intergenic 50.0%
!! GTTGCCGGCTTCAGTATCTT+AGG - chr2_1:17922363-17922382 Msa0199050:intron 50.0%
CCAGCCTAAGATACTGAAGC+CGG + chr2_1:17922370-17922389 None:intergenic 50.0%
CGGCTTCAGTATCTTAGGCT+GGG - chr2_1:17922368-17922387 Msa0199050:intron 50.0%
CCAGCTTGAGATGCAGAAGA+GGG + chr2_1:17922865-17922884 None:intergenic 50.0%
ACCAGCTTGAGATGCAGAAG+AGG + chr2_1:17922866-17922885 None:intergenic 50.0%
GATCCAAGCAAAGCATGCTC+TGG + chr2_1:17923132-17923151 None:intergenic 50.0%
CGGGAGAGAGAGATGAGTCT+CGG - chr2_1:17917718-17917737 Msa0199050:three_prime_UTR 55.0%
ATCTCACGAATGGCGGTGCT+AGG + chr2_1:17918079-17918098 None:intergenic 55.0%
! TGTGTGTCGGTGCAGTGAAC+CGG - chr2_1:17918315-17918334 Msa0199050:intron 55.0%
! GTTTGGTGGGGTTGGATGCA+TGG - chr2_1:17918654-17918673 Msa0199050:intron 55.0%
AGAATGGAGGTCGCCAGAGA+TGG - chr2_1:17920599-17920618 Msa0199050:intron 55.0%
GAATGGAGGTCGCCAGAGAT+GGG - chr2_1:17920600-17920619 Msa0199050:intron 55.0%
CAGTGGCAACATCCCATCTC+TGG + chr2_1:17920615-17920634 None:intergenic 55.0%
AGATGGGATGTTGCCACTGC+TGG - chr2_1:17920616-17920635 Msa0199050:intron 55.0%
GATGTTGCCACTGCTGGAGA+TGG - chr2_1:17920622-17920641 Msa0199050:intron 55.0%
TCCTCATCCATCTCCAGCAG+TGG + chr2_1:17920632-17920651 None:intergenic 55.0%
! ACCCAGAAGCACAGAGGACT+CGG + chr2_1:17920699-17920718 None:intergenic 55.0%
TTGAGAAACCAAGGGAGGGG+GGG + chr2_1:17920785-17920804 None:intergenic 55.0%
GTTGAGAAACCAAGGGAGGG+GGG + chr2_1:17920786-17920805 None:intergenic 55.0%
GGTTGAGAAACCAAGGGAGG+GGG + chr2_1:17920787-17920806 None:intergenic 55.0%
GGTACCCAAGGCACAACTCA+GGG + chr2_1:17920814-17920833 None:intergenic 55.0%
TGGTACCCAAGGCACAACTC+AGG + chr2_1:17920815-17920834 None:intergenic 55.0%
AAGGCTATGCTGTGGCATGG+TGG + chr2_1:17920873-17920892 None:intergenic 55.0%
! ACTAAAGTTTGGGGCAGGGG+AGG + chr2_1:17921204-17921223 None:intergenic 55.0%
! TACACTGTGGTACCGAGCTC+CGG - chr2_1:17921387-17921406 Msa0199050:intron 55.0%
AATCGGCGACCTCTATTCCC+TGG - chr2_1:17921487-17921506 Msa0199050:intron 55.0%
ATCGGCGACCTCTATTCCCT+GGG - chr2_1:17921488-17921507 Msa0199050:intron 55.0%
TCGGAATCCCCAGGGAATAG+AGG + chr2_1:17921499-17921518 None:intergenic 55.0%
TTTGCAGGACCTAGCAACCG+TGG - chr2_1:17922225-17922244 Msa0199050:intron 55.0%
ACTGAAGCCGGCAACAATCG+AGG + chr2_1:17922358-17922377 None:intergenic 55.0%
CCGGCTTCAGTATCTTAGGC+TGG - chr2_1:17922367-17922386 Msa0199050:intron 55.0%
CCCTCTTCTGCATCTCAAGC+TGG - chr2_1:17922862-17922881 Msa0199050:intron 55.0%
!! AATTACTGCCAGGAGCGCTG+TGG - chr2_1:17923162-17923181 Msa0199050:CDS 55.0%
GCCACTGCTGGAGATGGATG+AGG - chr2_1:17920628-17920647 Msa0199050:intron 60.0%
GCCGAGTCCTCTGTGCTTCT+GGG - chr2_1:17920695-17920714 Msa0199050:intron 60.0%
TTTCTGTTCCCCCCCTCCCT+TGG - chr2_1:17920774-17920793 Msa0199050:intron 60.0%
! GGGGAGGTTTTCCCGTGCAA+AGG + chr2_1:17921188-17921207 None:intergenic 60.0%
TCGGCGACCTCTATTCCCTG+GGG - chr2_1:17921489-17921508 Msa0199050:intron 60.0%
TTCATGCTCCACAGCGCTCC+TGG + chr2_1:17923173-17923192 None:intergenic 60.0%
GGCCGAGTCCTCTGTGCTTC+TGG - chr2_1:17920694-17920713 Msa0199050:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 17917696 17923526 17917696 ID=Msa0199050;Name=Msa0199050
chr2_1 mRNA 17917696 17923526 17917696 ID=Msa0199050-mRNA-1;Parent=Msa0199050;Name=Msa0199050-mRNA-1;_AED=0.11;_eAED=0.11;_QI=160|0.83|1|1|1|1|7|304|236
chr2_1 exon 17917696 17918089 17917696 ID=Msa0199050-mRNA-1:exon:7634;Parent=Msa0199050-mRNA-1
chr2_1 exon 17918937 17918990 17918937 ID=Msa0199050-mRNA-1:exon:7633;Parent=Msa0199050-mRNA-1
chr2_1 exon 17919075 17919162 17919075 ID=Msa0199050-mRNA-1:exon:7632;Parent=Msa0199050-mRNA-1
chr2_1 exon 17919677 17919840 17919677 ID=Msa0199050-mRNA-1:exon:7631;Parent=Msa0199050-mRNA-1
chr2_1 exon 17921973 17922093 17921973 ID=Msa0199050-mRNA-1:exon:7630;Parent=Msa0199050-mRNA-1
chr2_1 exon 17923085 17923269 17923085 ID=Msa0199050-mRNA-1:exon:7629;Parent=Msa0199050-mRNA-1
chr2_1 exon 17923358 17923526 17923358 ID=Msa0199050-mRNA-1:exon:7628;Parent=Msa0199050-mRNA-1
chr2_1 five_prime_UTR 17923367 17923526 17923367 ID=Msa0199050-mRNA-1:five_prime_utr;Parent=Msa0199050-mRNA-1
chr2_1 CDS 17923358 17923366 17923358 ID=Msa0199050-mRNA-1:cds;Parent=Msa0199050-mRNA-1
chr2_1 CDS 17923085 17923269 17923085 ID=Msa0199050-mRNA-1:cds;Parent=Msa0199050-mRNA-1
chr2_1 CDS 17921973 17922093 17921973 ID=Msa0199050-mRNA-1:cds;Parent=Msa0199050-mRNA-1
chr2_1 CDS 17919677 17919840 17919677 ID=Msa0199050-mRNA-1:cds;Parent=Msa0199050-mRNA-1
chr2_1 CDS 17919075 17919162 17919075 ID=Msa0199050-mRNA-1:cds;Parent=Msa0199050-mRNA-1
chr2_1 CDS 17918937 17918990 17918937 ID=Msa0199050-mRNA-1:cds;Parent=Msa0199050-mRNA-1
chr2_1 CDS 17918000 17918089 17918000 ID=Msa0199050-mRNA-1:cds;Parent=Msa0199050-mRNA-1
chr2_1 three_prime_UTR 17917696 17917999 17917696 ID=Msa0199050-mRNA-1:three_prime_utr;Parent=Msa0199050-mRNA-1
Gene Sequence

>Msa0199050

ATGGAGCAATACGAAAAGGTGGAGAAGATTGGTGAAGGAACATACGGCGTCGTTTACAAGGCACGTGACCGTGTTACGAATGAAACCATCGCGTTGAAGAAGATTCGACTTGAACAGGAAGATGAAGGTGTTCCTAGCACCGCCATTCGTGAGATTTCGCTGCTTAAAGAAATGCAGCATAGGAACATCGTTAGGTTGCAGGATGTAGTGCACAGTGACAAGCGATTGTATCTGGTTTTTGAGTATCTGGACTTAGATCTGAAGAAGCATATGGATTCATCTCCTGAGTTTATAAAAGATCCGCGACAAGTAAAAGTAGTTACACTGTGGTACCGAGCTCCGGAAATATTGCTTGGATCTCGTCATTATTCTACCCCAGTTGATGTTTGGTCAGTGGGATGTATATTTGCAGAGATGGCAAATCGGCGACCTCTATTCCCTGGGGATTCCGAGATTGATGAGTTATTTAAAATATTTAGAATCTTGGGTACACCAAATGAAGATACATGGCCAGGAGTAACTTCATTGCCTGATTTTAAATCAACATTTCCCAGGTGGCCATCTAAGGACCTAGCAACCGTGGTTCCAAATCTTGAGCCAGCTGGTCTTGATCTTCTTAATAGCATGCTTTGCTTGGATCCCACCAAAAGAATTACTGCCAGGAGCGCTGTGGAGCATGAATATTTCAAAGACATTAAGTTTGTACCCTAA
Protein sequence

>Msa0199050

MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLFPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFKSTFPRWPSKDLATVVPNLEPAGLDLLNSMLCLDPTKRITARSAVEHEYFKDIKFVP*