AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0200630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200630 MtrunA17_Chr2g0296421 92.560 1035 30 5 3 993 11 1042 0.0 1947
Msa0200630 MtrunA17_Chr8g0352361 78.297 834 127 9 164 993 110 893 0.0 1292
Msa0200630 MtrunA17_Chr8g0352361 48.052 154 48 5 2 137 16 155 5.52e-27 118
Msa0200630 MtrunA17_Chr1g0191141 32.225 692 372 19 339 952 386 1058 3.02e-93 320
Msa0200630 MtrunA17_Chr7g0224051 31.457 693 388 19 340 952 387 1072 1.54e-88 308
Msa0200630 MtrunA17_Chr3g0114161 31.304 690 376 21 349 952 526 1203 3.26e-87 305
Msa0200630 MtrunA17_Chr7g0225791 31.133 697 358 20 338 952 584 1240 1.15e-85 301
Msa0200630 MtrunA17_Chr4g0047081 30.482 643 344 17 383 952 578 1190 3.21e-81 288
Msa0200630 MtrunA17_Chr5g0437621 29.143 700 407 20 335 952 567 1259 3.80e-80 285
Msa0200630 MtrunA17_Chr7g0233021 31.562 640 348 22 383 952 567 1186 1.31e-78 280
Msa0200630 MtrunA17_Chr7g0232971 30.805 646 348 21 383 952 630 1252 3.25e-77 276
Msa0200630 MtrunA17_Chr7g0233031 28.910 633 368 17 383 952 586 1199 8.29e-72 260
Msa0200630 MtrunA17_Chr7g0232991 29.443 557 308 11 464 952 75 614 6.55e-67 238
Msa0200630 MtrunA17_Chr7g0233001 32.525 495 272 15 500 952 1 475 2.22e-66 232
Msa0200630 MtrunA17_Chr2g0320781 38.559 236 128 8 713 938 5 233 1.22e-35 135
Msa0200630 MtrunA17_Chr3g0137091 25.447 503 328 12 462 950 289 758 8.72e-32 134
Msa0200630 MtrunA17_Chr4g0052341 25.486 514 306 17 464 951 747 1209 2.32e-29 127
Msa0200630 MtrunA17_Chr8g0384531 25.724 587 356 20 455 998 377 926 5.25e-29 125
Msa0200630 MtrunA17_Chr5g0393461 24.725 546 335 18 450 950 172 686 5.95e-29 125
Msa0200630 MtrunA17_Chr5g0394201 25.934 482 311 16 461 935 362 804 1.55e-28 124
Msa0200630 MtrunA17_Chr5g0442141 26.265 514 300 18 461 947 616 1077 5.24e-27 119
Msa0200630 MtrunA17_Chr1g0205891 25.979 485 308 19 461 935 375 818 2.16e-26 117
Msa0200630 MtrunA17_Chr1g0163011 23.870 553 354 17 442 944 175 710 3.47e-26 115
Msa0200630 MtrunA17_Chr1g0190391 27.907 215 141 4 456 657 576 789 5.16e-26 115
Msa0200630 MtrunA17_Chr3g0095091 25.000 528 317 19 448 947 555 1031 4.20e-25 113
Msa0200630 MtrunA17_Chr5g0403921 25.000 484 324 14 461 934 183 637 1.42e-23 107
Msa0200630 MtrunA17_Chr1g0183681 23.944 497 320 16 483 948 410 879 1.28e-22 105
Msa0200630 MtrunA17_Chr4g0066651 24.000 550 332 21 458 973 985 1482 7.59e-21 99.8
Msa0200630 MtrunA17_Chr4g0040301 35.556 180 100 4 800 970 381 553 7.48e-20 95.5
Msa0200630 MtrunA17_Chr7g0232121 22.792 566 341 24 462 984 39 551 9.81e-18 89.0
Msa0200630 MtrunA17_Chr7g0248031 25.743 505 295 20 458 929 990 1447 1.02e-17 89.4
Msa0200630 MtrunA17_Chr1g0190381 34.177 158 95 2 800 948 189 346 1.29e-17 87.4
Msa0200630 MtrunA17_Chr1g0175191 31.351 185 109 4 761 935 1017 1193 6.44e-16 83.2
Msa0200630 MtrunA17_Chr1g0168031 33.333 144 91 2 802 945 990 1128 4.91e-13 73.6
Msa0200630 MtrunA17_Chr2g0281601 37.398 123 72 2 813 935 1146 1263 2.98e-12 71.2
Msa0200630 MtrunA17_Chr7g0224021 35.632 87 43 2 456 531 25 109 1.12e-11 63.2
Msa0200630 MtrunA17_Chr2g0320751 30.667 150 97 3 797 945 848 991 2.20e-11 68.2
Msa0200630 MtrunA17_Chr1g0212331 33.858 127 78 3 811 936 880 1001 2.38e-11 68.2
Msa0200630 MtrunA17_Chr7g0255821 33.113 151 92 4 790 936 639 784 2.40e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200630 AT2G16390.2 64.244 688 228 7 320 993 208 891 0.0 918
Msa0200630 AT2G16390.1 64.244 688 228 7 320 993 205 888 0.0 916
Msa0200630 AT2G21450.1 54.464 672 283 5 344 995 148 816 0.0 755
Msa0200630 AT2G21450.2 54.464 672 283 5 344 995 155 823 0.0 754
Msa0200630 AT2G21450.3 54.464 672 283 5 344 995 57 725 0.0 754
Msa0200630 AT1G05490.1 30.398 704 379 22 335 952 675 1353 1.26e-89 314
Msa0200630 AT3G42670.4 28.404 683 405 14 345 952 539 1212 1.45e-81 289
Msa0200630 AT3G42670.2 28.446 682 404 15 345 952 539 1210 2.05e-81 289
Msa0200630 AT3G42670.3 28.446 682 404 15 345 952 539 1210 2.05e-81 289
Msa0200630 AT3G42670.1 28.446 682 404 15 345 952 539 1210 2.05e-81 289
Msa0200630 AT3G24340.1 31.644 651 378 15 347 952 453 1081 4.84e-80 283
Msa0200630 AT5G20420.1 29.640 695 408 19 340 963 542 1226 2.79e-79 283
Msa0200630 AT3G32330.1 37.283 346 175 4 440 776 1 313 2.29e-64 221
Msa0200630 AT3G32280.1 35.870 276 128 2 381 656 248 474 9.69e-51 187
Msa0200630 AT1G08600.4 26.598 579 322 17 456 948 712 1273 2.87e-45 178
Msa0200630 AT1G08600.3 26.598 579 322 17 456 948 712 1273 2.87e-45 178
Msa0200630 AT1G08600.2 26.598 579 322 17 456 948 712 1273 2.87e-45 178
Msa0200630 AT1G08600.1 26.170 577 306 18 456 948 712 1252 1.62e-38 157
Msa0200630 AT3G31900.1 32.734 278 127 5 381 658 153 370 6.54e-38 147
Msa0200630 AT5G63950.1 24.861 720 433 24 296 956 214 884 2.91e-29 126
Msa0200630 AT5G44800.1 24.760 521 323 16 465 964 692 1164 1.60e-28 125
Msa0200630 AT4G31900.3 25.097 518 310 16 462 961 225 682 4.45e-28 123
Msa0200630 AT4G31900.2 25.097 518 310 16 462 961 184 641 5.72e-28 122
Msa0200630 AT4G31900.1 25.097 518 310 16 462 961 225 682 7.80e-28 122
Msa0200630 AT5G63950.2 24.157 712 431 23 296 956 214 867 3.31e-27 120
Msa0200630 AT3G06010.1 26.132 486 306 19 461 935 402 845 1.77e-26 117
Msa0200630 AT2G13370.1 25.498 502 293 16 462 936 625 1072 3.51e-26 117
Msa0200630 AT2G13370.2 25.498 502 293 16 462 936 625 1072 3.51e-26 117
Msa0200630 AT2G13370.3 25.498 502 293 16 462 936 625 1072 3.51e-26 117
Msa0200630 AT2G25170.1 24.394 578 359 20 412 950 204 742 7.33e-26 115
Msa0200630 AT2G25170.4 24.394 578 359 20 412 950 204 742 7.33e-26 115
Msa0200630 AT2G25170.2 24.394 578 359 20 412 950 221 759 1.22e-25 115
Msa0200630 AT2G25170.3 24.394 578 359 20 412 950 230 768 1.23e-25 115
Msa0200630 AT5G19310.2 25.979 485 307 17 461 935 121 563 5.81e-25 112
Msa0200630 AT5G19310.1 25.979 485 307 17 461 935 385 827 9.92e-25 112
Msa0200630 AT2G28290.3 24.859 531 336 18 461 968 753 1243 1.96e-22 105
Msa0200630 AT2G28290.4 24.859 531 336 18 461 968 753 1243 1.96e-22 105
Msa0200630 AT2G28290.6 24.859 531 336 18 461 968 754 1244 2.00e-22 105
Msa0200630 AT2G28290.1 24.859 531 336 18 461 968 753 1243 2.25e-22 105
Msa0200630 AT2G28290.5 24.859 531 336 18 461 968 754 1244 2.29e-22 105
Msa0200630 AT2G28290.2 24.859 531 336 18 461 968 753 1243 2.55e-22 104
Msa0200630 AT2G18760.4 24.206 504 308 17 483 948 404 871 1.79e-21 101
Msa0200630 AT2G18760.1 24.206 504 308 17 483 948 404 871 1.79e-21 101
Msa0200630 AT2G18760.2 24.206 504 308 17 483 948 404 871 1.79e-21 101
Msa0200630 AT2G18760.7 24.206 504 308 17 483 948 404 871 1.79e-21 101
Msa0200630 AT2G18760.5 24.206 504 308 17 483 948 404 871 1.79e-21 101
Msa0200630 AT2G18760.6 24.206 504 308 17 483 948 404 871 1.79e-21 101
Msa0200630 AT2G18760.3 24.206 504 308 17 483 948 463 930 2.37e-21 101
Msa0200630 AT1G03750.1 36.943 157 94 2 794 950 523 674 5.67e-20 96.7
Msa0200630 AT2G02090.1 21.771 542 357 17 462 953 213 737 3.38e-19 94.0
Msa0200630 AT3G19210.3 30.137 219 127 5 448 654 166 370 1.83e-18 91.7
Msa0200630 AT3G19210.3 26.531 147 102 2 805 950 541 682 6.22e-11 67.0
Msa0200630 AT3G19210.2 30.137 219 127 5 448 654 166 370 2.47e-18 91.3
Msa0200630 AT3G19210.2 26.531 147 102 2 805 950 539 680 3.65e-11 67.8
Msa0200630 AT3G19210.1 30.137 219 127 5 448 654 166 370 2.61e-18 91.3
Msa0200630 AT3G19210.1 26.531 147 102 2 805 950 541 682 3.42e-11 68.2
Msa0200630 AT5G66750.1 25.046 547 347 20 461 992 201 699 4.23e-18 90.1
Msa0200630 AT2G46020.5 25.651 499 302 18 458 929 977 1433 9.87e-18 89.7
Msa0200630 AT2G46020.1 25.651 499 302 18 458 929 977 1433 9.87e-18 89.7
Msa0200630 AT2G46020.6 25.651 499 302 18 458 929 977 1433 9.87e-18 89.7
Msa0200630 AT2G46020.2 24.901 506 298 16 458 929 977 1434 1.73e-17 89.0
Msa0200630 AT2G46020.3 24.901 506 298 16 458 929 977 1434 1.73e-17 89.0
Msa0200630 AT2G46020.4 24.901 506 298 16 458 929 977 1434 1.73e-17 89.0
Msa0200630 AT5G43530.1 37.121 132 78 2 814 945 1126 1252 1.84e-15 82.0
Msa0200630 AT3G12810.2 29.577 213 126 4 797 993 1069 1273 2.06e-15 82.0
Msa0200630 AT3G12810.1 29.577 213 126 4 797 993 1073 1277 2.06e-15 82.0
Msa0200630 AT2G44980.1 24.390 492 312 22 462 935 51 500 3.32e-15 80.9
Msa0200630 AT1G61140.1 33.566 143 90 1 814 956 1122 1259 1.25e-12 72.8
Msa0200630 AT1G61140.3 33.813 139 87 1 814 952 964 1097 1.35e-12 72.8
Msa0200630 AT1G11100.5 36.066 122 73 2 814 935 927 1043 1.69e-12 72.4
Msa0200630 AT1G11100.3 36.066 122 73 2 814 935 971 1087 1.82e-12 72.4
Msa0200630 AT1G11100.1 36.066 122 73 2 814 935 1070 1186 1.88e-12 72.4
Msa0200630 AT1G11100.4 36.066 122 73 2 814 935 1114 1230 2.00e-12 72.4
Msa0200630 AT1G11100.2 36.066 122 73 2 814 935 1113 1229 2.07e-12 72.0
Msa0200630 AT3G20010.3 33.871 124 67 2 817 935 628 741 5.52e-11 67.4
Msa0200630 AT3G20010.2 33.871 124 67 2 817 935 603 716 6.00e-11 67.0

Find 189 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTGCCTCTAAAATATT+TGG 0.125276 2_1:+20840442 Msa0200630:CDS
CGCTTAGAGAGTGGAAAATT+TGG 0.193521 2_1:+20835686 Msa0200630:CDS
AACCCAGAAAATGCAAATAT+TGG 0.211991 2_1:+20835739 Msa0200630:CDS
CTGCAATTGGTTTCAAGTTT+GGG 0.228338 2_1:-20840268 None:intergenic
ACATGAGGAAGAAGATAATA+AGG 0.284394 2_1:+20837651 Msa0200630:CDS
TCTGCAATTGGTTTCAAGTT+TGG 0.285472 2_1:-20840269 None:intergenic
TCATCTGAATCAATGATAAA+TGG 0.290481 2_1:-20835962 None:intergenic
ATGTAAAAGCCCTGTATAAA+AGG 0.296271 2_1:+20840927 Msa0200630:CDS
ATGGAAAATAAGAACGTTAC+TGG 0.297270 2_1:+20835842 Msa0200630:CDS
ACATCATAATGTCATAGATT+TGG 0.300000 2_1:+20835871 Msa0200630:CDS
TTTCTAGAAAGTCCATTGTT+AGG 0.301488 2_1:+20840899 Msa0200630:CDS
AGTCTTTCACACCAGGTAAA+TGG 0.310452 2_1:-20839989 None:intergenic
GCAGGAGACTGAACTGGTTT+TGG 0.312654 2_1:-20836364 None:intergenic
GTACTGTGGTCTTCCTCTTC+TGG 0.313307 2_1:-20840767 None:intergenic
CTTGTATTGGAACTCAAATA+TGG 0.319708 2_1:-20838749 None:intergenic
TCTTTCTCTGTGTTATCATT+AGG 0.320029 2_1:-20837607 None:intergenic
TTTCGAAAATGTGGTTTGAA+TGG 0.333393 2_1:+20840810 Msa0200630:CDS
AATACTATCGACTTGGAAAA+AGG 0.333771 2_1:+20839536 Msa0200630:CDS
GTTTCCATCTTTATAAACTT+TGG 0.336727 2_1:-20839930 None:intergenic
ATTACAGTTATCACAGATAA+TGG 0.340357 2_1:-20839703 None:intergenic
TCTGTTACTCGTCAAGCTAT+TGG 0.341013 2_1:+20840680 Msa0200630:CDS
TTTCCATCTTTATAAACTTT+GGG 0.344732 2_1:-20839929 None:intergenic
CTCCTAATGCGTTGGACAAT+AGG 0.350767 2_1:-20839960 None:intergenic
AAATAAGAACGTTACTGGTT+TGG 0.351586 2_1:+20835847 Msa0200630:CDS
ATCTTCCTCATTTGAATCAA+TGG 0.354796 2_1:-20836098 None:intergenic
ATTCAAATGAGGAAGATGAT+AGG 0.367687 2_1:+20836104 Msa0200630:CDS
TGTGAAAGACTTCTGTGATT+TGG 0.367803 2_1:+20840001 Msa0200630:CDS
GGCAATGCAACTTCATGAAA+TGG 0.373763 2_1:-20836343 None:intergenic
CTGGCTCATGCTCCAGGATC+TGG 0.375281 2_1:+20839429 Msa0200630:CDS
ATAGTAGTGCAGTACCTTGC+TGG 0.375718 2_1:-20840096 None:intergenic
GTTTCTTAAGCAATATATCT+TGG 0.378503 2_1:-20839746 None:intergenic
GCACACCGAAAAGGATGTTT+TGG 0.378651 2_1:+20835907 Msa0200630:CDS
AGCTGTTATACATGATTTGC+GGG 0.378708 2_1:+20840067 Msa0200630:CDS
TCACTACATTTCTCTGCAAT+TGG 0.379021 2_1:-20840281 None:intergenic
GTGAGGGTATATCATTGGTT+GGG 0.379973 2_1:+20840618 Msa0200630:CDS
AATGTTATCATTGATTCAAA+TGG 0.380062 2_1:+20836289 Msa0200630:CDS
CAAGTCGATAGTATTCCTTT+AGG 0.381924 2_1:-20839528 None:intergenic
ATCAGCTGGTGAGAAGCTTT+TGG 0.391575 2_1:+20840406 Msa0200630:CDS
ATTCAGACGAGGAAGATGAT+AGG 0.395674 2_1:+20836206 Msa0200630:CDS
CCGCCCAAAGTTTATAAAGA+TGG 0.396049 2_1:+20839926 Msa0200630:CDS
TGCATTCTGGCTCATGCTCC+AGG 0.404134 2_1:+20839423 Msa0200630:CDS
ATGTTATCATTGATTCAAAT+GGG 0.404166 2_1:+20836290 Msa0200630:CDS
ACCCAGAAAATGCAAATATT+GGG 0.408264 2_1:+20835740 Msa0200630:CDS
TGGAAAGGTTAGCTATGAAA+TGG 0.408305 2_1:+20840462 Msa0200630:CDS
ATGACGGGCTAGAAGATGTT+TGG 0.408645 2_1:+20837773 Msa0200630:CDS
TTCTAGAAAGTCCATTGTTA+GGG 0.412455 2_1:+20840900 Msa0200630:CDS
GTTATGTTTGTCGCGTTTGT+GGG 0.414777 2_1:+20838704 Msa0200630:CDS
AAAGACAAAGGTAATTATGT+TGG 0.435675 2_1:+20837625 Msa0200630:CDS
TCACCCCGTCTCTCACATCT+TGG 0.439166 2_1:-20840346 None:intergenic
AGGAATTAATTTCGAAAATG+TGG 0.440301 2_1:+20840801 Msa0200630:CDS
ATGAATGTCTTTCCAGATCC+TGG 0.441533 2_1:-20839441 None:intergenic
AACCTATTGTCCAACGCATT+AGG 0.441584 2_1:+20839958 Msa0200630:CDS
TCATCTAAAATGAGAATTGA+CGG 0.441909 2_1:-20839768 None:intergenic
ACCTGGTGGGAGACCATCCT+GGG 0.448352 2_1:+20839397 Msa0200630:CDS
AAATGGAAGGGCTGGAGTCT+TGG 0.448957 2_1:+20840479 Msa0200630:CDS
TCTAATGCAGGAGACTGAAC+TGG 0.453819 2_1:-20836370 None:intergenic
GGTTATGTTTGTCGCGTTTG+TGG 0.457173 2_1:+20838703 Msa0200630:CDS
ACCACGAGAGGTCGTGCATC+GGG 0.459021 2_1:-20839501 None:intergenic
CATATTTGAGTTCCAATACA+AGG 0.465416 2_1:+20838750 Msa0200630:CDS
ACCAGTGTCTAACCTTGTAT+TGG 0.466307 2_1:-20838762 None:intergenic
AACCTGGTGGGAGACCATCC+TGG 0.468533 2_1:+20839396 Msa0200630:CDS
TCTTCATCATGATCATCTGT+TGG 0.469032 2_1:-20836019 None:intergenic
TAATGTCATAGATTTGGATT+CGG 0.469260 2_1:+20835877 Msa0200630:CDS
TTCTCCTCCATGGTAAGCAT+TGG 0.471176 2_1:-20837551 None:intergenic
ATGAAGTTAAGACAATAAAG+AGG 0.472373 2_1:+20840195 Msa0200630:CDS
AAGGTACTGCACTACTATAA+AGG 0.474619 2_1:+20840101 Msa0200630:CDS
TTCAGATGAGGAGGATGATA+AGG 0.476090 2_1:+20835976 Msa0200630:CDS
CCCCAGGATGGTCTCCCACC+AGG 0.479756 2_1:-20839398 None:intergenic
CTTTCCGACCAGGCCAGAAA+AGG 0.480032 2_1:+20840708 Msa0200630:CDS
CTTACAATCATTTCTAATGC+AGG 0.480541 2_1:-20836382 None:intergenic
ATTGGCCGTGCTTTCCGACC+AGG 0.480741 2_1:+20840698 Msa0200630:CDS
AAAGCTTCTCACCAGCTGAT+TGG 0.482830 2_1:-20840403 None:intergenic
TAGCTATGAAATGGAAGGGC+TGG 0.483976 2_1:+20840471 Msa0200630:CDS
TGACAGTAGATCACAACAAT+TGG 0.483985 2_1:+20839617 Msa0200630:CDS
AGGATCTGGAAAGACATTCA+TGG 0.485077 2_1:+20839443 Msa0200630:CDS
TTGGTTTCAAGTTTGGGTGC+AGG 0.489269 2_1:-20840262 None:intergenic
GAACTTATATGTCTGAATCA+TGG 0.492636 2_1:+20839235 Msa0200630:CDS
TGCCTCTAAAATATTTGGAA+AGG 0.493636 2_1:+20840447 Msa0200630:CDS
ACTGTTGGTATCCTAAGAAA+AGG 0.494216 2_1:-20839674 None:intergenic
ATGATAATGACTTCATGAAA+TGG 0.499153 2_1:-20836181 None:intergenic
CTAAAGGAATACTATCGACT+TGG 0.500033 2_1:+20839529 Msa0200630:CDS
GATCTGCATGTTCTCCTCCA+TGG 0.504352 2_1:-20837561 None:intergenic
TTCATTTGCTTTGCATGTCG+AGG 0.504870 2_1:-20839336 None:intergenic
GGTGAGGGTATATCATTGGT+TGG 0.506967 2_1:+20840617 Msa0200630:CDS
CCTCTCGTGGTGCTTCCTAA+AGG 0.507652 2_1:+20839513 Msa0200630:CDS
TCTCCTCCATGGTAAGCATT+GGG 0.510319 2_1:-20837550 None:intergenic
TCAGGAATTTCGCCTGAAGA+AGG 0.514055 2_1:+20835599 Msa0200630:CDS
TCATAGATTTGGATTCGGAC+GGG 0.516289 2_1:+20835882 Msa0200630:CDS
GACGAGTAACAGACGGGTTG+AGG 0.521054 2_1:-20840670 None:intergenic
TAGATGAGGGACACACTCCT+AGG 0.521780 2_1:+20839784 Msa0200630:CDS
CGAACCAAGATGTGAGAGAC+GGG 0.522137 2_1:+20840342 Msa0200630:CDS
ATGACTTCATGAAATGGTGC+TGG 0.522586 2_1:-20836175 None:intergenic
TAGCTGTTATACATGATTTG+CGG 0.523136 2_1:+20840066 Msa0200630:CDS
GAGGGAGATGGCAATGGCAA+TGG 0.526773 2_1:+20837795 Msa0200630:CDS
CATAGATTTGGATTCGGACG+GGG 0.528458 2_1:+20835883 Msa0200630:CDS
TTATAAACTTTGGGCGGACA+AGG 0.528879 2_1:-20839920 None:intergenic
GGAGCACTCCCTTTGTTCAG+TGG 0.530923 2_1:-20840534 None:intergenic
TTCAAATGAGGAAGATGATA+GGG 0.531045 2_1:+20836105 Msa0200630:CDS
AGAATCGTCCACTGAACAAA+GGG 0.535424 2_1:+20840526 Msa0200630:CDS
TGTTACCATTGATTCAAATG+AGG 0.536803 2_1:+20836093 Msa0200630:CDS
GAGGAGGATGATAAGGATCA+TGG 0.536967 2_1:+20835983 Msa0200630:CDS
GTCATAGATTTGGATTCGGA+CGG 0.540389 2_1:+20835881 Msa0200630:CDS
CCACAGTACTTGTGTCAAGA+AGG 0.540817 2_1:+20840781 Msa0200630:CDS
GTATCAGTATTCTCGTTCCT+AGG 0.541700 2_1:-20839801 None:intergenic
TGAGGGTATATCATTGGTTG+GGG 0.542484 2_1:+20840619 Msa0200630:CDS
GGACGGGGAGCACACCGAAA+AGG 0.543559 2_1:+20835898 Msa0200630:CDS
TTCAGACGAGGAAGATGATA+GGG 0.544307 2_1:+20836207 Msa0200630:CDS
CACCACGAGAGGTCGTGCAT+CGG 0.550292 2_1:-20839502 None:intergenic
AATAGTTGATTAACAAGTCT+AGG 0.550478 2_1:-20835782 None:intergenic
GGATCCTACTCCTAATGCGT+TGG 0.553435 2_1:-20839968 None:intergenic
TTCTATATCTGAGCATACAA+TGG 0.558790 2_1:+20840307 Msa0200630:CDS
TGAACAAAGGGAGTGCTCCA+TGG 0.559236 2_1:+20840538 Msa0200630:CDS
AGCTGCTGATTCTCCAGAAG+AGG 0.560162 2_1:+20840754 Msa0200630:CDS
AAACACTTTGCAGAAGGACC+CGG 0.561229 2_1:+20840028 Msa0200630:CDS
TATCATTGATTCAGATGAGG+AGG 0.561761 2_1:+20835967 Msa0200630:CDS
AAAGACAAAGGTGTTTACAT+TGG 0.561970 2_1:+20837712 Msa0200630:CDS
TCTGGCCTGGTCGGAAAGCA+CGG 0.562735 2_1:-20840703 None:intergenic
GGTTGAAAACACTTTGCAGA+AGG 0.564686 2_1:+20840022 Msa0200630:CDS
TTTACATCTTCCCCTAACAA+TGG 0.567105 2_1:-20840911 None:intergenic
CATGATCCCAATGCTTACCA+TGG 0.571021 2_1:+20837544 Msa0200630:CDS
ACAGTAAAATCAACTAGGCC+AGG 0.571652 2_1:-20840143 None:intergenic
TCAATCAAAGCATGTGGTGA+GGG 0.572090 2_1:+20840602 Msa0200630:CDS
AGATCATCCACCCGAAGAAG+AGG 0.572717 2_1:+20838633 Msa0200630:CDS
ACGGGCTAGAAGATGTTTGG+AGG 0.582292 2_1:+20837776 Msa0200630:CDS
TCAACTATTCAGAGTGGTGA+CGG 0.583951 2_1:+20835796 Msa0200630:CDS
AGGTTGACACTGAAGATGAC+GGG 0.586083 2_1:+20837758 Msa0200630:CDS
CTGAATCTATGCCAATCAGC+TGG 0.587383 2_1:+20840392 Msa0200630:CDS
GGAGTTTCTGACATGGCAAG+TGG 0.588515 2_1:+20839557 Msa0200630:CDS
CGGGCTAGAAGATGTTTGGA+GGG 0.589781 2_1:+20837777 Msa0200630:CDS
GAAAATTGAATCCTTCGACT+TGG 0.592086 2_1:-20839365 None:intergenic
AGAAGATGTTTGGAGGGAGA+TGG 0.593018 2_1:+20837783 Msa0200630:CDS
AAGGTTAGCTATGAAATGGA+AGG 0.595000 2_1:+20840466 Msa0200630:CDS
TCCCGATGCACGACCTCTCG+TGG 0.597869 2_1:+20839500 Msa0200630:CDS
TTGTCCAACGCATTAGGAGT+AGG 0.597875 2_1:+20839964 Msa0200630:CDS
TAGGAACGAGAATACTGATA+CGG 0.598994 2_1:+20839803 Msa0200630:CDS
GAGAATCGTCCACTGAACAA+AGG 0.601522 2_1:+20840525 Msa0200630:CDS
ATGTGGTGAGGGTATATCAT+TGG 0.601963 2_1:+20840613 Msa0200630:CDS
ATGAAACCGCACCAAGTCGA+AGG 0.602444 2_1:+20839354 Msa0200630:CDS
AGATAATGGACGAAAACTGT+TGG 0.602446 2_1:-20839689 None:intergenic
AAGGTTGACACTGAAGATGA+CGG 0.603475 2_1:+20837757 Msa0200630:CDS
AGGAGTAGGATCCATTTACC+TGG 0.603942 2_1:+20839978 Msa0200630:CDS
TGAAGTTAAGACAATAAAGA+GGG 0.605026 2_1:+20840196 Msa0200630:CDS
TGTTTACATTGGTGTACATG+AGG 0.605749 2_1:+20837723 Msa0200630:CDS
ATTTATCATTGATTCAGATG+AGG 0.606144 2_1:+20835964 Msa0200630:CDS
TTGAATCCTTCGACTTGGTG+CGG 0.606513 2_1:-20839360 None:intergenic
GTTATGAATCGCTTAGAGAG+TGG 0.607165 2_1:+20835677 Msa0200630:CDS
GGAAGTCTTAAAACAGTGGG+TGG 0.608781 2_1:+20839638 Msa0200630:CDS
AGTTGAGACAGTTGATGTGA+AGG 0.609517 2_1:+20840862 Msa0200630:CDS
TTTATATCAAAATCATGTCA+AGG 0.609653 2_1:+20839878 Msa0200630:CDS
TAATTATGTTGGAGTACATG+AGG 0.612315 2_1:+20837636 Msa0200630:CDS
TTTGGGTCAATCAAAGCATG+TGG 0.612350 2_1:+20840596 Msa0200630:CDS
ATTGGAAGTCTTAAAACAGT+GGG 0.613903 2_1:+20839635 Msa0200630:CDS
AAGTTCAAGATGTCTTCTGT+AGG 0.616210 2_1:+20840227 Msa0200630:CDS
GTTTGTGGGGTTATTGACAG+AGG 0.616734 2_1:+20838718 Msa0200630:CDS
GCGAACCAAGATGTGAGAGA+CGG 0.616830 2_1:+20840341 Msa0200630:CDS
GTCAATCAAAGCATGTGGTG+AGG 0.617648 2_1:+20840601 Msa0200630:CDS
TGTTATCATTGATTCAAATG+GGG 0.619334 2_1:+20836291 Msa0200630:CDS
ACAGTTGATGTGAAGGAATG+TGG 0.620738 2_1:+20840869 Msa0200630:CDS
TGATGAAGAAACTCCCAACA+TGG 0.622428 2_1:+20835823 Msa0200630:CDS
TGATGAAGAAACTCCCAACA+TGG 0.622428 2_1:+20836234 Msa0200630:CDS
TTTGAATGGAATGAATATTG+TGG 0.623573 2_1:+20840824 Msa0200630:CDS
CCATCTTTATAAACTTTGGG+CGG 0.625396 2_1:-20839926 None:intergenic
GCACCACAGTAAAATCAACT+AGG 0.627117 2_1:-20840148 None:intergenic
TAGCTTGACGAGTAACAGAC+GGG 0.631651 2_1:-20840676 None:intergenic
TCACAGAAGTCTTTCACACC+AGG 0.631873 2_1:-20839996 None:intergenic
GATAACACAAAGAAAGACAA+AGG 0.636337 2_1:+20837700 Msa0200630:CDS
TTTCTTGTCAGAAACCTGGT+GGG 0.638542 2_1:+20839384 Msa0200630:CDS
ACATCACCATGTGTTAAACA+TGG 0.639224 2_1:-20835656 None:intergenic
AATTGGAAGTCTTAAAACAG+TGG 0.644070 2_1:+20839634 Msa0200630:CDS
CCTTTAGGAAGCACCACGAG+AGG 0.646282 2_1:-20839513 None:intergenic
ATAGCTTGACGAGTAACAGA+CGG 0.650423 2_1:-20840677 None:intergenic
AGGTTAGCTATGAAATGGAA+GGG 0.651392 2_1:+20840467 Msa0200630:CDS
GATCCCAATGCTTACCATGG+AGG 0.651668 2_1:+20837547 Msa0200630:CDS
GATAACACAGAGAAAGACAA+AGG 0.656527 2_1:+20837613 Msa0200630:CDS
CATTATCATCGATTCAGACG+AGG 0.657741 2_1:+20836195 Msa0200630:CDS
TGTTTGGAGGGAGATGGCAA+TGG 0.662485 2_1:+20837789 Msa0200630:CDS
ACATGAGGAAGAAGATAACA+AGG 0.662860 2_1:+20837738 Msa0200630:CDS
TTATGTTTGTCGCGTTTGTG+GGG 0.662905 2_1:+20838705 Msa0200630:CDS
CCTGGTGGGAGACCATCCTG+GGG 0.668528 2_1:+20839398 Msa0200630:CDS
CCTTCTTGACACAAGTACTG+TGG 0.673674 2_1:-20840781 None:intergenic
ACTTCATGAAATGGTGCTGG+AGG 0.677441 2_1:-20836172 None:intergenic
AAAATTCAACAATTCACCCG+AGG 0.695204 2_1:+20840562 Msa0200630:CDS
AGCTTGCCATGTTTAACACA+TGG 0.699668 2_1:+20835650 Msa0200630:CDS
TGTTAATCAACTATTCAGAG+TGG 0.700089 2_1:+20835790 Msa0200630:CDS
TCTAGAAAGTCCATTGTTAG+GGG 0.705989 2_1:+20840901 Msa0200630:CDS
CTGGTGGGAGACCATCCTGG+GGG 0.719970 2_1:+20839399 Msa0200630:CDS
TTTGCGGGAGATGACCAGCA+AGG 0.730371 2_1:+20840082 Msa0200630:CDS
GAACCAAGATGTGAGAGACG+GGG 0.738263 2_1:+20840343 Msa0200630:CDS
ATATCAAAATCATGTCAAGG+AGG 0.742826 2_1:+20839881 Msa0200630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATAAATAAAAAAAA+TGG + chr2_1:20837109-20837128 Msa0200630:intron 0.0%
!! ACATATTAAAGTAAAAAATA+AGG - chr2_1:20836602-20836621 None:intergenic 10.0%
!! TTACTTTAATATGTATAAAG+TGG + chr2_1:20836608-20836627 Msa0200630:intron 15.0%
!! AATGTATAACTTATCATTAT+AGG + chr2_1:20836768-20836787 Msa0200630:intron 15.0%
!! AATTATAGATTGGAAAATAT+TGG + chr2_1:20837086-20837105 Msa0200630:intron 15.0%
!! AATAAAAAAAATGGATATTG+TGG + chr2_1:20837118-20837137 Msa0200630:intron 15.0%
!! TCATTAACAGATATATATTA+AGG - chr2_1:20837950-20837969 None:intergenic 15.0%
!! TAAAATAATTTCTATGCATA+TGG + chr2_1:20838398-20838417 Msa0200630:intron 15.0%
!!! AAAGAAATTTTTGTAATATC+AGG + chr2_1:20840503-20840522 Msa0200630:CDS 15.0%
!!! ATCAATGATAACATTTTGAT+CGG - chr2_1:20836284-20836303 None:intergenic 20.0%
!!! AATGTTATCATTGATTCAAA+TGG + chr2_1:20836289-20836308 Msa0200630:CDS 20.0%
!!! ATGTTATCATTGATTCAAAT+GGG + chr2_1:20836290-20836309 Msa0200630:CDS 20.0%
!! TAAAATGAAGTACAATAGTT+CGG - chr2_1:20836478-20836497 None:intergenic 20.0%
!! AATTTAGTCTGACATATATT+TGG + chr2_1:20836662-20836681 Msa0200630:intron 20.0%
!!! CTCTTACAATATAAATTTTC+TGG + chr2_1:20837038-20837057 Msa0200630:intron 20.0%
!! TAGTTATGCAAATTATAGAT+TGG + chr2_1:20837076-20837095 Msa0200630:intron 20.0%
!! AACATGTTTGGAAAAATAAA+TGG - chr2_1:20837255-20837274 None:intergenic 20.0%
!! AGTGAAAAGAAAAGAAAAAA+AGG - chr2_1:20837388-20837407 None:intergenic 20.0%
!! GAAATAATATGAAGAAAAAC+AGG - chr2_1:20837914-20837933 None:intergenic 20.0%
!! AAATATGCATTACATTAACT+AGG - chr2_1:20838223-20838242 None:intergenic 20.0%
!! TGTCTTAAAATTAGATTCAT+AGG + chr2_1:20838861-20838880 Msa0200630:intron 20.0%
!! AACCTTCAATAAAATTGATA+CGG - chr2_1:20839202-20839221 None:intergenic 20.0%
!!! AAATATATCAGCTTTTTCTT+TGG - chr2_1:20839265-20839284 None:intergenic 20.0%
!! AAAGAAAAAGCTGATATATT+TGG + chr2_1:20839264-20839283 Msa0200630:CDS 20.0%
!! TTTATATCAAAATCATGTCA+AGG + chr2_1:20839878-20839897 Msa0200630:CDS 20.0%
!! TTTCCATCTTTATAAACTTT+GGG - chr2_1:20839932-20839951 None:intergenic 20.0%
!! TACAAAAAATTATGTAACAG+TGG - chr2_1:20840958-20840977 None:intergenic 20.0%
! AATAGTTGATTAACAAGTCT+AGG - chr2_1:20835785-20835804 None:intergenic 25.0%
! ACATCATAATGTCATAGATT+TGG + chr2_1:20835871-20835890 Msa0200630:CDS 25.0%
! TAATGTCATAGATTTGGATT+CGG + chr2_1:20835877-20835896 Msa0200630:CDS 25.0%
! TCATCTGAATCAATGATAAA+TGG - chr2_1:20835965-20835984 None:intergenic 25.0%
!!! ATTTATCATTGATTCAGATG+AGG + chr2_1:20835964-20835983 Msa0200630:CDS 25.0%
!!! ATCAATGGTAACATTTTGAT+GGG - chr2_1:20836086-20836105 None:intergenic 25.0%
!! AATCAATGGTAACATTTTGA+TGG - chr2_1:20836087-20836106 None:intergenic 25.0%
!! GGATCAAAAAAAGGATATTT+TGG + chr2_1:20836126-20836145 Msa0200630:CDS 25.0%
!! ATGATAATGACTTCATGAAA+TGG - chr2_1:20836184-20836203 None:intergenic 25.0%
!!! ACTTTTTCATTTTCCATGTT+GGG - chr2_1:20836250-20836269 None:intergenic 25.0%
!!! AACTTTTTCATTTTCCATGT+TGG - chr2_1:20836251-20836270 None:intergenic 25.0%
!!! TGTTATCATTGATTCAAATG+GGG + chr2_1:20836291-20836310 Msa0200630:CDS 25.0%
! TTTAAACACACCTTTCATTT+GGG + chr2_1:20836427-20836446 Msa0200630:intron 25.0%
! AACTTATCATTATAGGTCTT+TGG + chr2_1:20836775-20836794 Msa0200630:intron 25.0%
! TATCAAATGATTACCAAGTT+GGG - chr2_1:20837008-20837027 None:intergenic 25.0%
! ATATCAAATGATTACCAAGT+TGG - chr2_1:20837009-20837028 None:intergenic 25.0%
!! TATTTTTCCAAACATGTTGT+AGG + chr2_1:20837257-20837276 Msa0200630:intron 25.0%
! TAATACAAAGAATCTTACCA+AGG - chr2_1:20837325-20837344 None:intergenic 25.0%
! TTGGTAAGATTCTTTGTATT+AGG + chr2_1:20837324-20837343 Msa0200630:intron 25.0%
! AAAGACAAAGGTAATTATGT+TGG + chr2_1:20837625-20837644 Msa0200630:CDS 25.0%
!! CATTTTCCTTATGAAAACAA+GGG + chr2_1:20837983-20838002 Msa0200630:intron 25.0%
!! ATTTTCCTTATGAAAACAAG+GGG + chr2_1:20837984-20838003 Msa0200630:intron 25.0%
! ATCATAATTCAGAAGATTTC+AGG - chr2_1:20838261-20838280 None:intergenic 25.0%
! TTAAACTAAATCAATCCCAA+AGG - chr2_1:20838587-20838606 None:intergenic 25.0%
!!! TTCATTTTAAAAGACGATCT+TGG + chr2_1:20838682-20838701 Msa0200630:CDS 25.0%
! ACAGAATCTCTTATAGTTTA+TGG + chr2_1:20838950-20838969 Msa0200630:intron 25.0%
! ACCAAACCAAAATGATAAAA+TGG + chr2_1:20839071-20839090 Msa0200630:intron 25.0%
!!! AATGTGCCATTTTATCATTT+TGG - chr2_1:20839080-20839099 None:intergenic 25.0%
! AAATGATAAAATGGCACATT+AGG + chr2_1:20839080-20839099 Msa0200630:intron 25.0%
!! TACCGTATCAATTTTATTGA+AGG + chr2_1:20839197-20839216 Msa0200630:intron 25.0%
! ACACTGTAAAAATCATAAAG+TGG - chr2_1:20839591-20839610 None:intergenic 25.0%
!! TTATGATTTTTACAGTGTGA+AGG + chr2_1:20839593-20839612 Msa0200630:CDS 25.0%
! ATTACAGTTATCACAGATAA+TGG - chr2_1:20839706-20839725 None:intergenic 25.0%
! GTTTCTTAAGCAATATATCT+TGG - chr2_1:20839749-20839768 None:intergenic 25.0%
!! TCATCTAAAATGAGAATTGA+CGG - chr2_1:20839771-20839790 None:intergenic 25.0%
!! TCAATTCTCATTTTAGATGA+GGG + chr2_1:20839771-20839790 Msa0200630:CDS 25.0%
!!! ATGATTTTGATATAAAGTCC+CGG - chr2_1:20839874-20839893 None:intergenic 25.0%
! GTTTCCATCTTTATAAACTT+TGG - chr2_1:20839933-20839952 None:intergenic 25.0%
! ATGAAGTTAAGACAATAAAG+AGG + chr2_1:20840195-20840214 Msa0200630:CDS 25.0%
! TGAAGTTAAGACAATAAAGA+GGG + chr2_1:20840196-20840215 Msa0200630:CDS 25.0%
!!! AACCTTTCCAAATATTTTAG+AGG - chr2_1:20840452-20840471 None:intergenic 25.0%
!! TGAATTGTTGAATTTTTCCA+TGG - chr2_1:20840558-20840577 None:intergenic 25.0%
! AGGAATTAATTTCGAAAATG+TGG + chr2_1:20840801-20840820 Msa0200630:CDS 25.0%
! TTTGAATGGAATGAATATTG+TGG + chr2_1:20840824-20840843 Msa0200630:CDS 25.0%
! TTTGCATTTTCTGGGTTATA+AGG - chr2_1:20835736-20835755 None:intergenic 30.0%
AACCCAGAAAATGCAAATAT+TGG + chr2_1:20835739-20835758 Msa0200630:CDS 30.0%
ACCCAGAAAATGCAAATATT+GGG + chr2_1:20835740-20835759 Msa0200630:CDS 30.0%
! TAGGACATTTTGCAAAGTAA+GGG - chr2_1:20835766-20835785 None:intergenic 30.0%
TGTTAATCAACTATTCAGAG+TGG + chr2_1:20835790-20835809 Msa0200630:CDS 30.0%
!!! ACGTTCTTATTTTCCATGTT+GGG - chr2_1:20835839-20835858 None:intergenic 30.0%
!!! AACGTTCTTATTTTCCATGT+TGG - chr2_1:20835840-20835859 None:intergenic 30.0%
ATGGAAAATAAGAACGTTAC+TGG + chr2_1:20835842-20835861 Msa0200630:CDS 30.0%
! AAATAAGAACGTTACTGGTT+TGG + chr2_1:20835847-20835866 Msa0200630:CDS 30.0%
!!! GCTTTTTCACTTTCAATGTA+GGG - chr2_1:20836049-20836068 None:intergenic 30.0%
!!! AGCTTTTTCACTTTCAATGT+AGG - chr2_1:20836050-20836069 None:intergenic 30.0%
!! TGTTACCATTGATTCAAATG+AGG + chr2_1:20836093-20836112 Msa0200630:CDS 30.0%
ATCTTCCTCATTTGAATCAA+TGG - chr2_1:20836101-20836120 None:intergenic 30.0%
ATTCAAATGAGGAAGATGAT+AGG + chr2_1:20836104-20836123 Msa0200630:CDS 30.0%
TTCAAATGAGGAAGATGATA+GGG + chr2_1:20836105-20836124 Msa0200630:CDS 30.0%
AGATGATAGGGATCAAAAAA+AGG + chr2_1:20836117-20836136 Msa0200630:CDS 30.0%
! GGAACATTGTTTTCTCTTTT+CGG - chr2_1:20836154-20836173 None:intergenic 30.0%
CTTACAATCATTTCTAATGC+AGG - chr2_1:20836385-20836404 None:intergenic 30.0%
TTTAAAGGATTGCAAAAGCA+GGG - chr2_1:20836413-20836432 None:intergenic 30.0%
! CAAATGAAAGGTGTGTTTAA+AGG - chr2_1:20836428-20836447 None:intergenic 30.0%
CTTTAAACACACCTTTCATT+TGG + chr2_1:20836426-20836445 Msa0200630:intron 30.0%
! GTACTTCATTTTACCATTTG+TGG + chr2_1:20836485-20836504 Msa0200630:intron 30.0%
ATGTATAAAGTGGAATCTTC+TGG + chr2_1:20836618-20836637 Msa0200630:intron 30.0%
GTCAGACTAAATTATATCTC+TGG - chr2_1:20836655-20836674 None:intergenic 30.0%
TAGTCTGACATATATTTGGA+AGG + chr2_1:20836666-20836685 Msa0200630:intron 30.0%
TTATTGCATAGCCTAAATGT+TGG + chr2_1:20836830-20836849 Msa0200630:intron 30.0%
CTAAGAGAAATCCAACATTT+AGG - chr2_1:20836844-20836863 None:intergenic 30.0%
TAAAAACGCACATGATTCAA+TGG - chr2_1:20836885-20836904 None:intergenic 30.0%
TCATAGGAGTAAAGGAAAAA+AGG - chr2_1:20837181-20837200 None:intergenic 30.0%
!!! TTTTTTCCTTTACTCCTATG+AGG + chr2_1:20837180-20837199 Msa0200630:intron 30.0%
CTGAACGATGAACAATATAT+GGG + chr2_1:20837224-20837243 Msa0200630:intron 30.0%
TGAACGATGAACAATATATG+GGG + chr2_1:20837225-20837244 Msa0200630:intron 30.0%
AAAAGTTCCTACAACATGTT+TGG - chr2_1:20837267-20837286 None:intergenic 30.0%
!! TTGTAGGAACTTTTTCCATA+GGG + chr2_1:20837273-20837292 Msa0200630:intron 30.0%
! AACATTCTTTTTCCCACTTT+GGG - chr2_1:20837459-20837478 None:intergenic 30.0%
! TAACATTCTTTTTCCCACTT+TGG - chr2_1:20837460-20837479 None:intergenic 30.0%
TCTGTGCAAAAATGCTTTAT+AGG + chr2_1:20837516-20837535 Msa0200630:intron 30.0%
CTGTGCAAAAATGCTTTATA+GGG + chr2_1:20837517-20837536 Msa0200630:intron 30.0%
TCTTTCTCTGTGTTATCATT+AGG - chr2_1:20837610-20837629 None:intergenic 30.0%
TAATTATGTTGGAGTACATG+AGG + chr2_1:20837636-20837655 Msa0200630:CDS 30.0%
ACATGAGGAAGAAGATAATA+AGG + chr2_1:20837651-20837670 Msa0200630:CDS 30.0%
GATAACACAAAGAAAGACAA+AGG + chr2_1:20837700-20837719 Msa0200630:CDS 30.0%
!! AAAGACAAAGGTGTTTACAT+TGG + chr2_1:20837712-20837731 Msa0200630:CDS 30.0%
! GCATTTTCCTTATGAAAACA+AGG + chr2_1:20837982-20838001 Msa0200630:intron 30.0%
! TTTTCCTTATGAAAACAAGG+GGG + chr2_1:20837985-20838004 Msa0200630:intron 30.0%
!! ATTTTGATGTTCACTGAGAA+TGG + chr2_1:20838134-20838153 Msa0200630:intron 30.0%
CTAAATGAAGCCGATAAAAA+TGG - chr2_1:20838165-20838184 None:intergenic 30.0%
!! TTATCGGCTTCATTTAGTAT+AGG + chr2_1:20838168-20838187 Msa0200630:intron 30.0%
!! TATCGGCTTCATTTAGTATA+GGG + chr2_1:20838169-20838188 Msa0200630:intron 30.0%
TGCATTACATTAACTAGGTA+TGG - chr2_1:20838218-20838237 None:intergenic 30.0%
TCAAGTTACATGCATATAAC+AGG - chr2_1:20838332-20838351 None:intergenic 30.0%
!! AATTTGACTTTAAGAGCATC+AGG + chr2_1:20838422-20838441 Msa0200630:intron 30.0%
ATTATCTCTTAGAGTTCCTT+TGG + chr2_1:20838568-20838587 Msa0200630:intron 30.0%
TTATCTCTTAGAGTTCCTTT+GGG + chr2_1:20838569-20838588 Msa0200630:intron 30.0%
AGTTTAAATGTACTCCTACT+AGG + chr2_1:20838600-20838619 Msa0200630:intron 30.0%
CTTGTATTGGAACTCAAATA+TGG - chr2_1:20838752-20838771 None:intergenic 30.0%
! CATATTTGAGTTCCAATACA+AGG + chr2_1:20838750-20838769 Msa0200630:CDS 30.0%
!! GCTTGTTTGGTCTTAAATAT+TGG + chr2_1:20838797-20838816 Msa0200630:intron 30.0%
! ATAGGTTGAATGTTTCAACA+TGG + chr2_1:20838879-20838898 Msa0200630:intron 30.0%
! TAGGTTGAATGTTTCAACAT+GGG + chr2_1:20838880-20838899 Msa0200630:intron 30.0%
CTCTTATAGTTTATGGTTTC+AGG + chr2_1:20838957-20838976 Msa0200630:intron 30.0%
!!! ATCATTTTGGTTTGGTAAAG+AGG - chr2_1:20839067-20839086 None:intergenic 30.0%
!!! GCCATTTTATCATTTTGGTT+TGG - chr2_1:20839075-20839094 None:intergenic 30.0%
! ATTAGGACATTTTATGGCAT+GGG + chr2_1:20839097-20839116 Msa0200630:intron 30.0%
GAACTTATATGTCTGAATCA+TGG + chr2_1:20839235-20839254 Msa0200630:CDS 30.0%
!! AATACTATCGACTTGGAAAA+AGG + chr2_1:20839536-20839555 Msa0200630:CDS 30.0%
AATTGGAAGTCTTAAAACAG+TGG + chr2_1:20839634-20839653 Msa0200630:CDS 30.0%
ATTGGAAGTCTTAAAACAGT+GGG + chr2_1:20839635-20839654 Msa0200630:CDS 30.0%
! GTCAATTCTCATTTTAGATG+AGG + chr2_1:20839770-20839789 Msa0200630:CDS 30.0%
ATATCAAAATCATGTCAAGG+AGG + chr2_1:20839881-20839900 Msa0200630:CDS 30.0%
!!! CTACTTTCCTTTTAAAATCC+GGG - chr2_1:20840049-20840068 None:intergenic 30.0%
!!! GCTACTTTCCTTTTAAAATC+CGG - chr2_1:20840050-20840069 None:intergenic 30.0%
TAGCTGTTATACATGATTTG+CGG + chr2_1:20840066-20840085 Msa0200630:CDS 30.0%
! TTAACTTCATGCTTTTGTCT+GGG - chr2_1:20840185-20840204 None:intergenic 30.0%
TTCTATATCTGAGCATACAA+TGG + chr2_1:20840307-20840326 Msa0200630:CDS 30.0%
!! TCTCTTGCCTCTAAAATATT+TGG + chr2_1:20840442-20840461 Msa0200630:CDS 30.0%
!! TGCCTCTAAAATATTTGGAA+AGG + chr2_1:20840447-20840466 Msa0200630:CDS 30.0%
! GATTGACCCAAAAAAGATTT+TGG - chr2_1:20840588-20840607 None:intergenic 30.0%
TTTCGAAAATGTGGTTTGAA+TGG + chr2_1:20840810-20840829 Msa0200630:CDS 30.0%
! TTTCTAGAAAGTCCATTGTT+AGG + chr2_1:20840899-20840918 Msa0200630:CDS 30.0%
! TTCTAGAAAGTCCATTGTTA+GGG + chr2_1:20840900-20840919 Msa0200630:CDS 30.0%
ATGTAAAAGCCCTGTATAAA+AGG + chr2_1:20840927-20840946 Msa0200630:CDS 30.0%
ACATCACCATGTGTTAAACA+TGG - chr2_1:20835659-20835678 None:intergenic 35.0%
! GCCCAATATTTGCATTTTCT+GGG - chr2_1:20835744-20835763 None:intergenic 35.0%
! CTAGGACATTTTGCAAAGTA+AGG - chr2_1:20835767-20835786 None:intergenic 35.0%
! GTGACATTGTATCCTCTTTT+TGG - chr2_1:20835935-20835954 None:intergenic 35.0%
!! TATCATTGATTCAGATGAGG+AGG + chr2_1:20835967-20835986 Msa0200630:CDS 35.0%
TCTTCATCATGATCATCTGT+TGG - chr2_1:20836022-20836041 None:intergenic 35.0%
GTTTAAAGGATTGCAAAAGC+AGG - chr2_1:20836414-20836433 None:intergenic 35.0%
AAGGATACAACCCAAATGAA+AGG - chr2_1:20836440-20836459 None:intergenic 35.0%
!! ATTTGGGTTGTATCCTTCTT+GGG + chr2_1:20836443-20836462 Msa0200630:intron 35.0%
! CTTCATTTTACCATTTGTGG+CGG + chr2_1:20836488-20836507 Msa0200630:intron 35.0%
AGTGAAACTTGACAGTAGAA+TGG - chr2_1:20836954-20836973 None:intergenic 35.0%
AGGAGTAAAGGAAAAAAGGA+AGG - chr2_1:20837177-20837196 None:intergenic 35.0%
GCTGAACGATGAACAATATA+TGG + chr2_1:20837223-20837242 Msa0200630:intron 35.0%
!! GTTGTAGGAACTTTTTCCAT+AGG + chr2_1:20837272-20837291 Msa0200630:intron 35.0%
ATGAGCATTAACAATCCCTA+TGG - chr2_1:20837291-20837310 None:intergenic 35.0%
GCTCATAAATCTAGATTCCT+TGG + chr2_1:20837305-20837324 Msa0200630:intron 35.0%
! ACATTCTTTTTCCCACTTTG+GGG - chr2_1:20837458-20837477 None:intergenic 35.0%
GATAACACAGAGAAAGACAA+AGG + chr2_1:20837613-20837632 Msa0200630:CDS 35.0%
TGTTTACATTGGTGTACATG+AGG + chr2_1:20837723-20837742 Msa0200630:CDS 35.0%
ACATGAGGAAGAAGATAACA+AGG + chr2_1:20837738-20837757 Msa0200630:CDS 35.0%
AAAACAGGTTACAAACGAGT+GGG - chr2_1:20837899-20837918 None:intergenic 35.0%
AAAAACAGGTTACAAACGAG+TGG - chr2_1:20837900-20837919 None:intergenic 35.0%
TAAGGAAAATGCTCTGTCTT+AGG - chr2_1:20837974-20837993 None:intergenic 35.0%
!!! ATTTCCCCCTTGTTTTCATA+AGG - chr2_1:20837992-20838011 None:intergenic 35.0%
TTATGAAAACAAGGGGGAAA+TGG + chr2_1:20837991-20838010 Msa0200630:intron 35.0%
TATGAAAACAAGGGGGAAAT+GGG + chr2_1:20837992-20838011 Msa0200630:intron 35.0%
AGTAAAACGCTCATCAAAGA+AGG - chr2_1:20838072-20838091 None:intergenic 35.0%
!! AATGGCCTGTCCATTTTTAT+CGG + chr2_1:20838152-20838171 Msa0200630:intron 35.0%
!! TTTAAGAGCATCAGGAATGT+TGG + chr2_1:20838430-20838449 Msa0200630:intron 35.0%
TCTCTGCATTAATGCTTGTT+TGG + chr2_1:20838784-20838803 Msa0200630:intron 35.0%
! TACCTCTTTTGTGGGAAAAA+TGG + chr2_1:20838980-20838999 Msa0200630:intron 35.0%
! TGGCACATTAGGACATTTTA+TGG + chr2_1:20839091-20839110 Msa0200630:intron 35.0%
! CATTAGGACATTTTATGGCA+TGG + chr2_1:20839096-20839115 Msa0200630:intron 35.0%
GAAAATTGAATCCTTCGACT+TGG - chr2_1:20839368-20839387 None:intergenic 35.0%
! CAATTTTCTTGTCAGAAACC+TGG + chr2_1:20839380-20839399 Msa0200630:CDS 35.0%
CAAGTCGATAGTATTCCTTT+AGG - chr2_1:20839531-20839550 None:intergenic 35.0%
! CTAAAGGAATACTATCGACT+TGG + chr2_1:20839529-20839548 Msa0200630:CDS 35.0%
TGACAGTAGATCACAACAAT+TGG + chr2_1:20839617-20839636 Msa0200630:CDS 35.0%
!!! AACAAGAGCATCCTTTTCTT+AGG + chr2_1:20839663-20839682 Msa0200630:CDS 35.0%
ACTGTTGGTATCCTAAGAAA+AGG - chr2_1:20839677-20839696 None:intergenic 35.0%
!! AGATAATGGACGAAAACTGT+TGG - chr2_1:20839692-20839711 None:intergenic 35.0%
TAGGAACGAGAATACTGATA+CGG + chr2_1:20839803-20839822 Msa0200630:CDS 35.0%
!! CCAAGAAAAGTTGTTTTGTC+CGG + chr2_1:20839852-20839871 Msa0200630:CDS 35.0%
!! CAAGAAAAGTTGTTTTGTCC+GGG + chr2_1:20839853-20839872 Msa0200630:CDS 35.0%
CCATCTTTATAAACTTTGGG+CGG - chr2_1:20839929-20839948 None:intergenic 35.0%
TGTGAAAGACTTCTGTGATT+TGG + chr2_1:20840001-20840020 Msa0200630:CDS 35.0%
! AGCTGTTATACATGATTTGC+GGG + chr2_1:20840067-20840086 Msa0200630:CDS 35.0%
!! AAGGTACTGCACTACTATAA+AGG + chr2_1:20840101-20840120 Msa0200630:CDS 35.0%
! CTTAACTTCATGCTTTTGTC+TGG - chr2_1:20840186-20840205 None:intergenic 35.0%
AAGTTCAAGATGTCTTCTGT+AGG + chr2_1:20840227-20840246 Msa0200630:CDS 35.0%
!! CTGCAATTGGTTTCAAGTTT+GGG - chr2_1:20840271-20840290 None:intergenic 35.0%
!! TCTGCAATTGGTTTCAAGTT+TGG - chr2_1:20840272-20840291 None:intergenic 35.0%
TCACTACATTTCTCTGCAAT+TGG - chr2_1:20840284-20840303 None:intergenic 35.0%
! TGGAAAGGTTAGCTATGAAA+TGG + chr2_1:20840462-20840481 Msa0200630:CDS 35.0%
! AAGGTTAGCTATGAAATGGA+AGG + chr2_1:20840466-20840485 Msa0200630:CDS 35.0%
! AGGTTAGCTATGAAATGGAA+GGG + chr2_1:20840467-20840486 Msa0200630:CDS 35.0%
AAAATTCAACAATTCACCCG+AGG + chr2_1:20840562-20840581 Msa0200630:CDS 35.0%
! ACACAAACACTTTCCTTTTC+TGG - chr2_1:20840724-20840743 None:intergenic 35.0%
TCTAGAAAGTCCATTGTTAG+GGG + chr2_1:20840901-20840920 Msa0200630:CDS 35.0%
TTTACATCTTCCCCTAACAA+TGG - chr2_1:20840914-20840933 None:intergenic 35.0%
! GTGGTCTAACCTTTTATACA+GGG - chr2_1:20840939-20840958 None:intergenic 35.0%
! AGTGGTCTAACCTTTTATAC+AGG - chr2_1:20840940-20840959 None:intergenic 35.0%
!!! AGTTTTTTGCGTCCTTCTTC+AGG - chr2_1:20835614-20835633 None:intergenic 40.0%
AGCTTGCCATGTTTAACACA+TGG + chr2_1:20835650-20835669 Msa0200630:CDS 40.0%
GTTATGAATCGCTTAGAGAG+TGG + chr2_1:20835677-20835696 Msa0200630:CDS 40.0%
CGCTTAGAGAGTGGAAAATT+TGG + chr2_1:20835686-20835705 Msa0200630:CDS 40.0%
! GGCCCAATATTTGCATTTTC+TGG - chr2_1:20835745-20835764 None:intergenic 40.0%
TCAACTATTCAGAGTGGTGA+CGG + chr2_1:20835796-20835815 Msa0200630:CDS 40.0%
TGATGAAGAAACTCCCAACA+TGG + chr2_1:20835823-20835842 Msa0200630:CDS 40.0%
GTCATAGATTTGGATTCGGA+CGG + chr2_1:20835881-20835900 Msa0200630:CDS 40.0%
TCATAGATTTGGATTCGGAC+GGG + chr2_1:20835882-20835901 Msa0200630:CDS 40.0%
!! TGGTGCCAAAACATCCTTTT+CGG - chr2_1:20835915-20835934 None:intergenic 40.0%
!!! GATGTTTTGGCACCAAAAAG+AGG + chr2_1:20835920-20835939 Msa0200630:CDS 40.0%
TTCAGATGAGGAGGATGATA+AGG + chr2_1:20835976-20835995 Msa0200630:CDS 40.0%
GAAAGTGAAAAAGCTACTGC+TGG + chr2_1:20836055-20836074 Msa0200630:CDS 40.0%
ATGACTTCATGAAATGGTGC+TGG - chr2_1:20836178-20836197 None:intergenic 40.0%
!! CATTATCATCGATTCAGACG+AGG + chr2_1:20836195-20836214 Msa0200630:CDS 40.0%
ATTCAGACGAGGAAGATGAT+AGG + chr2_1:20836206-20836225 Msa0200630:CDS 40.0%
TTCAGACGAGGAAGATGATA+GGG + chr2_1:20836207-20836226 Msa0200630:CDS 40.0%
TGATGAAGAAACTCCCAACA+TGG + chr2_1:20835823-20835842 Msa0200630:CDS 40.0%
GGCAATGCAACTTCATGAAA+TGG - chr2_1:20836346-20836365 None:intergenic 40.0%
!! CATTTGGGTTGTATCCTTCT+TGG + chr2_1:20836442-20836461 Msa0200630:intron 40.0%
! TAAAGTGGAATCTTCTGGAG+AGG + chr2_1:20836623-20836642 Msa0200630:intron 40.0%
!! TTTTCTGGTACCTTGTTGCT+TGG + chr2_1:20837053-20837072 Msa0200630:intron 40.0%
TGCATAACTACCAAGCAACA+AGG - chr2_1:20837066-20837085 None:intergenic 40.0%
AAGGTTGACACTGAAGATGA+CGG + chr2_1:20837757-20837776 Msa0200630:CDS 40.0%
AAACAGGTTACAAACGAGTG+GGG - chr2_1:20837898-20837917 None:intergenic 40.0%
GAAAACTGGACTATTGTGCA+GGG + chr2_1:20838014-20838033 Msa0200630:intron 40.0%
AAAACTGGACTATTGTGCAG+GGG + chr2_1:20838015-20838034 Msa0200630:intron 40.0%
TGAAGCCGATAAAAATGGAC+AGG - chr2_1:20838160-20838179 None:intergenic 40.0%
GGGTATATGTGTGTATATGC+TGG + chr2_1:20838189-20838208 Msa0200630:intron 40.0%
GGCATAACAACGAGAAAGAA+AGG - chr2_1:20838311-20838330 None:intergenic 40.0%
ATCTGCAGAAACATCCTAGT+AGG - chr2_1:20838617-20838636 None:intergenic 40.0%
!! AGCGTCATTTTCCTCTTCTT+CGG - chr2_1:20838647-20838666 None:intergenic 40.0%
GTTATGTTTGTCGCGTTTGT+GGG + chr2_1:20838704-20838723 Msa0200630:CDS 40.0%
TTATGTTTGTCGCGTTTGTG+GGG + chr2_1:20838705-20838724 Msa0200630:CDS 40.0%
TCCAATACAAGGTTAGACAC+TGG + chr2_1:20838761-20838780 Msa0200630:intron 40.0%
ACCAGTGTCTAACCTTGTAT+TGG - chr2_1:20838765-20838784 None:intergenic 40.0%
!! GTTTCAGGTACCTCTTTTGT+GGG + chr2_1:20838972-20838991 Msa0200630:intron 40.0%
!! CACCATTTTTCCCACAAAAG+AGG - chr2_1:20838985-20839004 None:intergenic 40.0%
TTCATTTGCTTTGCATGTCG+AGG - chr2_1:20839339-20839358 None:intergenic 40.0%
! TTTTCTTGTCAGAAACCTGG+TGG + chr2_1:20839383-20839402 Msa0200630:CDS 40.0%
TTTCTTGTCAGAAACCTGGT+GGG + chr2_1:20839384-20839403 Msa0200630:CDS 40.0%
ATGAATGTCTTTCCAGATCC+TGG - chr2_1:20839444-20839463 None:intergenic 40.0%
AGGATCTGGAAAGACATTCA+TGG + chr2_1:20839443-20839462 Msa0200630:CDS 40.0%
GGAAAAAGGAGTTTCTGACA+TGG + chr2_1:20839550-20839569 Msa0200630:CDS 40.0%
GTATCAGTATTCTCGTTCCT+AGG - chr2_1:20839804-20839823 None:intergenic 40.0%
! TGGTGTTTGTACTTTTGCGA+GGG - chr2_1:20839835-20839854 None:intergenic 40.0%
!! TTGGTGTTTGTACTTTTGCG+AGG - chr2_1:20839836-20839855 None:intergenic 40.0%
! CCGGACAAAACAACTTTTCT+TGG - chr2_1:20839855-20839874 None:intergenic 40.0%
TTATAAACTTTGGGCGGACA+AGG - chr2_1:20839923-20839942 None:intergenic 40.0%
CCGCCCAAAGTTTATAAAGA+TGG + chr2_1:20839926-20839945 Msa0200630:CDS 40.0%
AACCTATTGTCCAACGCATT+AGG + chr2_1:20839958-20839977 Msa0200630:CDS 40.0%
AGTCTTTCACACCAGGTAAA+TGG - chr2_1:20839992-20840011 None:intergenic 40.0%
GGTTGAAAACACTTTGCAGA+AGG + chr2_1:20840022-20840041 Msa0200630:CDS 40.0%
! AGAAGGACCCGGATTTTAAA+AGG + chr2_1:20840039-20840058 Msa0200630:CDS 40.0%
! GATTTTCTTGATGAGCTTCC+TGG + chr2_1:20840125-20840144 Msa0200630:CDS 40.0%
ACAGTAAAATCAACTAGGCC+AGG - chr2_1:20840146-20840165 None:intergenic 40.0%
!! TGGCCTAGTTGATTTTACTG+TGG + chr2_1:20840145-20840164 Msa0200630:CDS 40.0%
GCACCACAGTAAAATCAACT+AGG - chr2_1:20840151-20840170 None:intergenic 40.0%
AGAATCGTCCACTGAACAAA+GGG + chr2_1:20840526-20840545 Msa0200630:CDS 40.0%
!! CCAAAAAAGATTTTGGCCTC+GGG - chr2_1:20840581-20840600 None:intergenic 40.0%
!! CCCAAAAAAGATTTTGGCCT+CGG - chr2_1:20840582-20840601 None:intergenic 40.0%
!!! CCGAGGCCAAAATCTTTTTT+GGG + chr2_1:20840579-20840598 Msa0200630:CDS 40.0%
TTTGGGTCAATCAAAGCATG+TGG + chr2_1:20840596-20840615 Msa0200630:CDS 40.0%
TCAATCAAAGCATGTGGTGA+GGG + chr2_1:20840602-20840621 Msa0200630:CDS 40.0%
! ATGTGGTGAGGGTATATCAT+TGG + chr2_1:20840613-20840632 Msa0200630:CDS 40.0%
! GTGAGGGTATATCATTGGTT+GGG + chr2_1:20840618-20840637 Msa0200630:CDS 40.0%
! TGAGGGTATATCATTGGTTG+GGG + chr2_1:20840619-20840638 Msa0200630:CDS 40.0%
ATAGCTTGACGAGTAACAGA+CGG - chr2_1:20840680-20840699 None:intergenic 40.0%
TCTGTTACTCGTCAAGCTAT+TGG + chr2_1:20840680-20840699 Msa0200630:CDS 40.0%
! AGTTGAGACAGTTGATGTGA+AGG + chr2_1:20840862-20840881 Msa0200630:CDS 40.0%
! ACAGTTGATGTGAAGGAATG+TGG + chr2_1:20840869-20840888 Msa0200630:CDS 40.0%
TCAGGAATTTCGCCTGAAGA+AGG + chr2_1:20835599-20835618 Msa0200630:CDS 45.0%
CATAGATTTGGATTCGGACG+GGG + chr2_1:20835883-20835902 Msa0200630:CDS 45.0%
! GCACACCGAAAAGGATGTTT+TGG + chr2_1:20835907-20835926 Msa0200630:CDS 45.0%
GAGGAGGATGATAAGGATCA+TGG + chr2_1:20835983-20836002 Msa0200630:CDS 45.0%
! ACTTCATGAAATGGTGCTGG+AGG - chr2_1:20836175-20836194 None:intergenic 45.0%
TCTAATGCAGGAGACTGAAC+TGG - chr2_1:20836373-20836392 None:intergenic 45.0%
TCGGTCAAATCATCCCAAGA+AGG - chr2_1:20836459-20836478 None:intergenic 45.0%
CTAGAATCTTCCGCCACAAA+TGG - chr2_1:20836501-20836520 None:intergenic 45.0%
GTTGGGACACTTGAGACAAA+AGG - chr2_1:20836991-20837010 None:intergenic 45.0%
TTGTCTCAAGTGTCCCAACT+TGG + chr2_1:20836992-20837011 Msa0200630:intron 45.0%
CCTTTACTCCTATGAGGCTA+CGG + chr2_1:20837186-20837205 Msa0200630:intron 45.0%
TATCTAGCCAACCCCAAAGT+GGG + chr2_1:20837444-20837463 Msa0200630:intron 45.0%
!!! TCTTTTTCCCACTTTGGGGT+TGG - chr2_1:20837454-20837473 None:intergenic 45.0%
CATGATCCCAATGCTTACCA+TGG + chr2_1:20837544-20837563 Msa0200630:CDS 45.0%
TCTCCTCCATGGTAAGCATT+GGG - chr2_1:20837553-20837572 None:intergenic 45.0%
TTCTCCTCCATGGTAAGCAT+TGG - chr2_1:20837554-20837573 None:intergenic 45.0%
AGGTTGACACTGAAGATGAC+GGG + chr2_1:20837758-20837777 Msa0200630:CDS 45.0%
!! ATGACGGGCTAGAAGATGTT+TGG + chr2_1:20837773-20837792 Msa0200630:CDS 45.0%
AGAAGATGTTTGGAGGGAGA+TGG + chr2_1:20837783-20837802 Msa0200630:CDS 45.0%
GGGGGAAATCTACTTGACAA+AGG - chr2_1:20837877-20837896 None:intergenic 45.0%
AACAGGTTACAAACGAGTGG+GGG - chr2_1:20837897-20837916 None:intergenic 45.0%
GGAAAACTGGACTATTGTGC+AGG + chr2_1:20838013-20838032 Msa0200630:intron 45.0%
! TCATTTTCCTCTTCTTCGGG+TGG - chr2_1:20838643-20838662 None:intergenic 45.0%
!! GCGTCATTTTCCTCTTCTTC+GGG - chr2_1:20838646-20838665 None:intergenic 45.0%
GGTTATGTTTGTCGCGTTTG+TGG + chr2_1:20838703-20838722 Msa0200630:CDS 45.0%
GTTTGTGGGGTTATTGACAG+AGG + chr2_1:20838718-20838737 Msa0200630:CDS 45.0%
!! GGTTTCAGGTACCTCTTTTG+TGG + chr2_1:20838971-20838990 Msa0200630:intron 45.0%
!! TTGAATCCTTCGACTTGGTG+CGG - chr2_1:20839363-20839382 None:intergenic 45.0%
GGAAGTCTTAAAACAGTGGG+TGG + chr2_1:20839638-20839657 Msa0200630:CDS 45.0%
CTCCTAATGCGTTGGACAAT+AGG - chr2_1:20839963-20839982 None:intergenic 45.0%
TTGTCCAACGCATTAGGAGT+AGG + chr2_1:20839964-20839983 Msa0200630:CDS 45.0%
AGGAGTAGGATCCATTTACC+TGG + chr2_1:20839978-20839997 Msa0200630:CDS 45.0%
TCACAGAAGTCTTTCACACC+AGG - chr2_1:20839999-20840018 None:intergenic 45.0%
AAACACTTTGCAGAAGGACC+CGG + chr2_1:20840028-20840047 Msa0200630:CDS 45.0%
ATAGTAGTGCAGTACCTTGC+TGG - chr2_1:20840099-20840118 None:intergenic 45.0%
!! TTGGTTTCAAGTTTGGGTGC+AGG - chr2_1:20840265-20840284 None:intergenic 45.0%
CTGAATCTATGCCAATCAGC+TGG + chr2_1:20840392-20840411 Msa0200630:CDS 45.0%
AAAGCTTCTCACCAGCTGAT+TGG - chr2_1:20840406-20840425 None:intergenic 45.0%
! ATCAGCTGGTGAGAAGCTTT+TGG + chr2_1:20840406-20840425 Msa0200630:CDS 45.0%
TAGCTATGAAATGGAAGGGC+TGG + chr2_1:20840471-20840490 Msa0200630:CDS 45.0%
GAGAATCGTCCACTGAACAA+AGG + chr2_1:20840525-20840544 Msa0200630:CDS 45.0%
!!! CCCGAGGCCAAAATCTTTTT+TGG + chr2_1:20840578-20840597 Msa0200630:CDS 45.0%
GTCAATCAAAGCATGTGGTG+AGG + chr2_1:20840601-20840620 Msa0200630:CDS 45.0%
! GGTGAGGGTATATCATTGGT+TGG + chr2_1:20840617-20840636 Msa0200630:CDS 45.0%
TAGCTTGACGAGTAACAGAC+GGG - chr2_1:20840679-20840698 None:intergenic 45.0%
!! AACACTTTCCTTTTCTGGCC+TGG - chr2_1:20840719-20840738 None:intergenic 45.0%
! CCTTCTTGACACAAGTACTG+TGG - chr2_1:20840784-20840803 None:intergenic 45.0%
CCACAGTACTTGTGTCAAGA+AGG + chr2_1:20840781-20840800 Msa0200630:CDS 45.0%
!! TAAAAAAAATAACAAAATTA+AGG - chr2_1:20836565-20836584 None:intergenic 5.0%
!! GCAGGAGACTGAACTGGTTT+TGG - chr2_1:20836367-20836386 None:intergenic 50.0%
! GGAATCTTCTGGAGAGGAAG+AGG + chr2_1:20836629-20836648 Msa0200630:intron 50.0%
CCGTAGCCTCATAGGAGTAA+AGG - chr2_1:20837189-20837208 None:intergenic 50.0%
CTATCTAGCCAACCCCAAAG+TGG + chr2_1:20837443-20837462 Msa0200630:intron 50.0%
GATCCCAATGCTTACCATGG+AGG + chr2_1:20837547-20837566 Msa0200630:CDS 50.0%
GATCTGCATGTTCTCCTCCA+TGG - chr2_1:20837564-20837583 None:intergenic 50.0%
!! ACGGGCTAGAAGATGTTTGG+AGG + chr2_1:20837776-20837795 Msa0200630:CDS 50.0%
! CGGGCTAGAAGATGTTTGGA+GGG + chr2_1:20837777-20837796 Msa0200630:CDS 50.0%
TGTTTGGAGGGAGATGGCAA+TGG + chr2_1:20837789-20837808 Msa0200630:CDS 50.0%
ACAGGTTACAAACGAGTGGG+GGG - chr2_1:20837896-20837915 None:intergenic 50.0%
CAAGGGGGAAATGGGAAAAC+TGG + chr2_1:20838000-20838019 Msa0200630:intron 50.0%
TCTGCATGCACGCTGTTCTT+TGG + chr2_1:20838482-20838501 Msa0200630:intron 50.0%
AGATCATCCACCCGAAGAAG+AGG + chr2_1:20838633-20838652 Msa0200630:CDS 50.0%
ATGAAACCGCACCAAGTCGA+AGG + chr2_1:20839354-20839373 Msa0200630:CDS 50.0%
GGAGTTTCTGACATGGCAAG+TGG + chr2_1:20839557-20839576 Msa0200630:CDS 50.0%
TAGATGAGGGACACACTCCT+AGG + chr2_1:20839784-20839803 Msa0200630:CDS 50.0%
GGATCCTACTCCTAATGCGT+TGG - chr2_1:20839971-20839990 None:intergenic 50.0%
GCGAACCAAGATGTGAGAGA+CGG + chr2_1:20840341-20840360 Msa0200630:CDS 50.0%
CGAACCAAGATGTGAGAGAC+GGG + chr2_1:20840342-20840361 Msa0200630:CDS 50.0%
GAACCAAGATGTGAGAGACG+GGG + chr2_1:20840343-20840362 Msa0200630:CDS 50.0%
AAATGGAAGGGCTGGAGTCT+TGG + chr2_1:20840479-20840498 Msa0200630:CDS 50.0%
!! TGAACAAAGGGAGTGCTCCA+TGG + chr2_1:20840538-20840557 Msa0200630:CDS 50.0%
!! CTTTCCTTTTCTGGCCTGGT+CGG - chr2_1:20840715-20840734 None:intergenic 50.0%
!! AGCTGCTGATTCTCCAGAAG+AGG + chr2_1:20840754-20840773 Msa0200630:CDS 50.0%
GTACTGTGGTCTTCCTCTTC+TGG - chr2_1:20840770-20840789 None:intergenic 50.0%
GATGTGAGCCGTAGCCTCAT+AGG - chr2_1:20837197-20837216 None:intergenic 55.0%
GAGGGAGATGGCAATGGCAA+TGG + chr2_1:20837795-20837814 Msa0200630:CDS 55.0%
CAGGTTACAAACGAGTGGGG+GGG - chr2_1:20837895-20837914 None:intergenic 55.0%
!! TGCATTCTGGCTCATGCTCC+AGG + chr2_1:20839423-20839442 Msa0200630:CDS 55.0%
!! CCTTTAGGAAGCACCACGAG+AGG - chr2_1:20839516-20839535 None:intergenic 55.0%
CCTCTCGTGGTGCTTCCTAA+AGG + chr2_1:20839513-20839532 Msa0200630:CDS 55.0%
TTTGCGGGAGATGACCAGCA+AGG + chr2_1:20840082-20840101 Msa0200630:CDS 55.0%
TCACCCCGTCTCTCACATCT+TGG - chr2_1:20840349-20840368 None:intergenic 55.0%
! GGAGCACTCCCTTTGTTCAG+TGG - chr2_1:20840537-20840556 None:intergenic 55.0%
!! GACGAGTAACAGACGGGTTG+AGG - chr2_1:20840673-20840692 None:intergenic 55.0%
CTTTCCGACCAGGCCAGAAA+AGG + chr2_1:20840708-20840727 Msa0200630:CDS 55.0%
AACCTGGTGGGAGACCATCC+TGG + chr2_1:20839396-20839415 Msa0200630:CDS 60.0%
ACCTGGTGGGAGACCATCCT+GGG + chr2_1:20839397-20839416 Msa0200630:CDS 60.0%
CCAGAATGCATCCCCCAGGA+TGG - chr2_1:20839413-20839432 None:intergenic 60.0%
CCATCCTGGGGGATGCATTC+TGG + chr2_1:20839410-20839429 Msa0200630:CDS 60.0%
TGAGCCAGAATGCATCCCCC+AGG - chr2_1:20839417-20839436 None:intergenic 60.0%
CTGGCTCATGCTCCAGGATC+TGG + chr2_1:20839429-20839448 Msa0200630:CDS 60.0%
ACCACGAGAGGTCGTGCATC+GGG - chr2_1:20839504-20839523 None:intergenic 60.0%
CACCACGAGAGGTCGTGCAT+CGG - chr2_1:20839505-20839524 None:intergenic 60.0%
ATTGGCCGTGCTTTCCGACC+AGG + chr2_1:20840698-20840717 Msa0200630:CDS 60.0%
TCTGGCCTGGTCGGAAAGCA+CGG - chr2_1:20840706-20840725 None:intergenic 60.0%
! GGACGGGGAGCACACCGAAA+AGG + chr2_1:20835898-20835917 Msa0200630:CDS 65.0%
CCTGGTGGGAGACCATCCTG+GGG + chr2_1:20839398-20839417 Msa0200630:CDS 65.0%
CTGGTGGGAGACCATCCTGG+GGG + chr2_1:20839399-20839418 Msa0200630:CDS 65.0%
TCCCGATGCACGACCTCTCG+TGG + chr2_1:20839500-20839519 Msa0200630:CDS 65.0%
CCCCAGGATGGTCTCCCACC+AGG - chr2_1:20839401-20839420 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 20835593 20840985 20835593 ID=Msa0200630;Name=Msa0200630
chr2_1 mRNA 20835593 20840985 20835593 ID=Msa0200630-mRNA-1;Parent=Msa0200630;Name=Msa0200630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.33|0|1|1|1|4|0|1004
chr2_1 exon 20835593 20836399 20835593 ID=Msa0200630-mRNA-1:exon:8500;Parent=Msa0200630-mRNA-1
chr2_1 exon 20837538 20837828 20837538 ID=Msa0200630-mRNA-1:exon:8501;Parent=Msa0200630-mRNA-1
chr2_1 exon 20838622 20838771 20838622 ID=Msa0200630-mRNA-1:exon:8502;Parent=Msa0200630-mRNA-1
chr2_1 exon 20839219 20840985 20839219 ID=Msa0200630-mRNA-1:exon:8503;Parent=Msa0200630-mRNA-1
chr2_1 CDS 20835593 20836399 20835593 ID=Msa0200630-mRNA-1:cds;Parent=Msa0200630-mRNA-1
chr2_1 CDS 20837538 20837828 20837538 ID=Msa0200630-mRNA-1:cds;Parent=Msa0200630-mRNA-1
chr2_1 CDS 20838622 20838771 20838622 ID=Msa0200630-mRNA-1:cds;Parent=Msa0200630-mRNA-1
chr2_1 CDS 20839219 20840985 20839219 ID=Msa0200630-mRNA-1:cds;Parent=Msa0200630-mRNA-1
Gene Sequence

>Msa0200630

CTGAAATCAGGAATTTCGCCTGAAGAAGGACGCAAAAAACTTAAACTGTCAAGTGATAGCTTGCCATGTTTAACACATGGTGATGTTATGAATCGCTTAGAGAGTGGAAAATTTGGAAGTGTGACAAAAAATATTGAAGACCTTATAACCCAGAAAATGCAAATATTGGGCCCTTACTTTGCAAAATGTCCTAGACTTGTTAATCAACTATTCAGAGTGGTGACGGATCATGATGAAGAAACTCCCAACATGGAAAATAAGAACGTTACTGGTTTGGAACATCATAATGTCATAGATTTGGATTCGGACGGGGAGCACACCGAAAAGGATGTTTTGGCACCAAAAAGAGGATACAATGTCACTGCAGTACCATTTATCATTGATTCAGATGAGGAGGATGATAAGGATCATGGTCATGATACTGTTCCAACAGATGATCATGATGAAGAAACTCCCTACATTGAAAGTGAAAAAGCTACTGCTGGTATGTCCCATCAAAATGTTACCATTGATTCAAATGAGGAAGATGATAGGGATCAAAAAAAGGATATTTTGGCACCGAAAAGAGAAAACAATGTTCCTCCAGCACCATTTCATGAAGTCATTATCATCGATTCAGACGAGGAAGATGATAGGGATCATGATGAAGAAACTCCCAACATGGAAAATGAAAAAGTTACTGCTATGTCCGATCAAAATGTTATCATTGATTCAAATGGGGAAGATGACAAAGATCAAACTTCTTTTCTTCCATTTCATGAAGTTGCATTGCCAAAACCAGTTCAGTCTCCTGCATTAGAAATGATTGGATATCATGATCCCAATGCTTACCATGGAGGAGAACATGCAGATCTAAAATTTGAAACAAGTCTGCTTCCTAATGATAACACAGAGAAAGACAAAGGTAATTATGTTGGAGTACATGAGGAAGAAGATAATAAGGAATTTGAAACAAGTCTGTCTCTTGAAGATAACACAAAGAAAGACAAAGGTGTTTACATTGGTGTACATGAGGAAGAAGATAACAAGGTTGACACTGAAGATGACGGGCTAGAAGATGTTTGGAGGGAGATGGCAATGGCAATGGAAACTTCTAAAGATGTTTCTGCAGATCATCCACCCGAAGAAGAGGAAAATGACGCTGACTGTGATCATTCTTTCATTTTAAAAGACGATCTTGGTTATGTTTGTCGCGTTTGTGGGGTTATTGACAGAGGAATTGAAACCATATTTGAGTTCCAATACAAGGTTAAAAAGAGCACAAGAACTTATATGTCTGAATCATGGAATGCCAAAGAAAAAGCTGATATATTTGGAGTTAAGATTGCTAAAGATGATCTCTCAGTAACTGAAATATCAGCACATCCTCGACATGCAAAGCAAATGAAACCGCACCAAGTCGAAGGATTCAATTTTCTTGTCAGAAACCTGGTGGGAGACCATCCTGGGGGATGCATTCTGGCTCATGCTCCAGGATCTGGAAAGACATTCATGGTTATCTGTTTCATACAGAGTTTTCTAGAGAAGTATCCCGATGCACGACCTCTCGTGGTGCTTCCTAAAGGAATACTATCGACTTGGAAAAAGGAGTTTCTGACATGGCAAGTGGAAGATGTACCACTTTATGATTTTTACAGTGTGAAGGCTGACAGTAGATCACAACAATTGGAAGTCTTAAAACAGTGGGTGGATAACAAGAGCATCCTTTTCTTAGGATACCAACAGTTTTCGTCCATTATCTGTGATAACTGTAATAACAATACATCAATATCTTGCCAAGATATATTGCTTAAGAAACCGTCAATTCTCATTTTAGATGAGGGACACACTCCTAGGAACGAGAATACTGATACGGTACAGTCCCTCGCAAAAGTACAAACACCAAGAAAAGTTGTTTTGTCCGGGACTTTATATCAAAATCATGTCAAGGAGGTATTTAACGTGCTTAACCTTGTCCGCCCAAAGTTTATAAAGATGGAAACGTCTAAACCTATTGTCCAACGCATTAGGAGTAGGATCCATTTACCTGGTGTGAAAGACTTCTGTGATTTGGTTGAAAACACTTTGCAGAAGGACCCGGATTTTAAAAGGAAAGTAGCTGTTATACATGATTTGCGGGAGATGACCAGCAAGGTACTGCACTACTATAAAGGAGATTTTCTTGATGAGCTTCCTGGCCTAGTTGATTTTACTGTGGTGCTCAACATGACACCCAGACAAAAGCATGAAGTTAAGACAATAAAGAGGGTATTTAGAAAGTTCAAGATGTCTTCTGTAGGTAGTGCTGTATACCTGCACCCAAACTTGAAACCAATTGCAGAGAAATGTAGTGAAAATTCTATATCTGAGCATACAATGGATGATCTAATAGCGAACCAAGATGTGAGAGACGGGGTGAAATTAAAATTCTTTCGCAATATGCTGAATCTATGCCAATCAGCTGGTGAGAAGCTTTTGGTGTTCAGTCAATATCTCTTGCCTCTAAAATATTTGGAAAGGTTAGCTATGAAATGGAAGGGCTGGAGTCTTGGCAAAGAAATTTTTGTAATATCAGGAGAATCGTCCACTGAACAAAGGGAGTGCTCCATGGAAAAATTCAACAATTCACCCGAGGCCAAAATCTTTTTTGGGTCAATCAAAGCATGTGGTGAGGGTATATCATTGGTTGGGGCATCTCGTGTCATCATCTTAGATGTGCACCTCAACCCGTCTGTTACTCGTCAAGCTATTGGCCGTGCTTTCCGACCAGGCCAGAAAAGGAAAGTGTTTGTGTATCGATTGATAGCTGCTGATTCTCCAGAAGAGGAAGACCACAGTACTTGTGTCAAGAAGGAATTAATTTCGAAAATGTGGTTTGAATGGAATGAATATTGTGGTGACAAAGCTTTTGAAGTTGAGACAGTTGATGTGAAGGAATGTGGTGATATGTTTCTAGAAAGTCCATTGTTAGGGGAAGATGTAAAAGCCCTGTATAAAAGGTTAGACCACTGTTACATAATTTTTTGTATATCATAA
Protein sequence

>Msa0200630

LKSGISPEEGRKKLKLSSDSLPCLTHGDVMNRLESGKFGSVTKNIEDLITQKMQILGPYFAKCPRLVNQLFRVVTDHDEETPNMENKNVTGLEHHNVIDLDSDGEHTEKDVLAPKRGYNVTAVPFIIDSDEEDDKDHGHDTVPTDDHDEETPYIESEKATAGMSHQNVTIDSNEEDDRDQKKDILAPKRENNVPPAPFHEVIIIDSDEEDDRDHDEETPNMENEKVTAMSDQNVIIDSNGEDDKDQTSFLPFHEVALPKPVQSPALEMIGYHDPNAYHGGEHADLKFETSLLPNDNTEKDKGNYVGVHEEEDNKEFETSLSLEDNTKKDKGVYIGVHEEEDNKVDTEDDGLEDVWREMAMAMETSKDVSADHPPEEEENDADCDHSFILKDDLGYVCRVCGVIDRGIETIFEFQYKVKKSTRTYMSESWNAKEKADIFGVKIAKDDLSVTEISAHPRHAKQMKPHQVEGFNFLVRNLVGDHPGGCILAHAPGSGKTFMVICFIQSFLEKYPDARPLVVLPKGILSTWKKEFLTWQVEDVPLYDFYSVKADSRSQQLEVLKQWVDNKSILFLGYQQFSSIICDNCNNNTSISCQDILLKKPSILILDEGHTPRNENTDTVQSLAKVQTPRKVVLSGTLYQNHVKEVFNVLNLVRPKFIKMETSKPIVQRIRSRIHLPGVKDFCDLVENTLQKDPDFKRKVAVIHDLREMTSKVLHYYKGDFLDELPGLVDFTVVLNMTPRQKHEVKTIKRVFRKFKMSSVGSAVYLHPNLKPIAEKCSENSISEHTMDDLIANQDVRDGVKLKFFRNMLNLCQSAGEKLLVFSQYLLPLKYLERLAMKWKGWSLGKEIFVISGESSTEQRECSMEKFNNSPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKRKVFVYRLIAADSPEEEDHSTCVKKELISKMWFEWNEYCGDKAFEVETVDVKECGDMFLESPLLGEDVKALYKRLDHCYIIFCIS*