Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0320830 | XP_013463305.1 | 91.483 | 1045 | 30 | 6 | 1 | 989 | 1 | 1042 | 0.0 | 1930 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0320830 | sp|Q9SIW2|CHR35_ARATH | 64.244 | 688 | 228 | 7 | 316 | 989 | 205 | 888 | 0.0 | 917 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0320830 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0200630 | Msa0320830 | 0.835229 | 1.895299e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0320830 | MtrunA17_Chr2g0296421 | 91.483 | 1045 | 30 | 6 | 1 | 989 | 1 | 1042 | 0.0 | 1930 |
Msa0320830 | MtrunA17_Chr8g0352361 | 78.736 | 823 | 131 | 8 | 172 | 989 | 110 | 893 | 0.0 | 1291 |
Msa0320830 | MtrunA17_Chr8g0352361 | 46.626 | 163 | 50 | 7 | 1 | 145 | 12 | 155 | 1.43e-25 | 114 |
Msa0320830 | MtrunA17_Chr1g0191141 | 32.258 | 682 | 366 | 18 | 345 | 948 | 395 | 1058 | 2.20e-93 | 321 |
Msa0320830 | MtrunA17_Chr7g0224051 | 31.429 | 700 | 388 | 20 | 334 | 948 | 380 | 1072 | 3.43e-88 | 306 |
Msa0320830 | MtrunA17_Chr3g0114161 | 31.304 | 690 | 376 | 21 | 345 | 948 | 526 | 1203 | 1.89e-87 | 306 |
Msa0320830 | MtrunA17_Chr7g0225791 | 31.988 | 644 | 333 | 17 | 379 | 948 | 628 | 1240 | 3.79e-86 | 302 |
Msa0320830 | MtrunA17_Chr4g0047081 | 30.638 | 643 | 343 | 17 | 379 | 948 | 578 | 1190 | 8.63e-82 | 289 |
Msa0320830 | MtrunA17_Chr5g0437621 | 29.489 | 685 | 399 | 20 | 341 | 948 | 582 | 1259 | 1.51e-80 | 286 |
Msa0320830 | MtrunA17_Chr7g0233021 | 31.719 | 640 | 347 | 22 | 379 | 948 | 567 | 1186 | 3.91e-79 | 281 |
Msa0320830 | MtrunA17_Chr7g0232971 | 31.115 | 646 | 346 | 21 | 379 | 948 | 630 | 1252 | 1.62e-78 | 280 |
Msa0320830 | MtrunA17_Chr7g0233031 | 29.219 | 640 | 357 | 18 | 379 | 948 | 586 | 1199 | 3.54e-72 | 261 |
Msa0320830 | MtrunA17_Chr7g0233001 | 32.727 | 495 | 271 | 15 | 496 | 948 | 1 | 475 | 2.73e-67 | 235 |
Msa0320830 | MtrunA17_Chr7g0232991 | 29.443 | 557 | 308 | 11 | 460 | 948 | 75 | 614 | 2.78e-67 | 238 |
Msa0320830 | MtrunA17_Chr2g0320781 | 39.831 | 236 | 125 | 9 | 709 | 934 | 5 | 233 | 2.26e-36 | 137 |
Msa0320830 | MtrunA17_Chr3g0137091 | 24.805 | 512 | 320 | 14 | 458 | 946 | 289 | 758 | 2.31e-31 | 133 |
Msa0320830 | MtrunA17_Chr8g0384531 | 25.554 | 587 | 357 | 19 | 451 | 994 | 377 | 926 | 1.94e-29 | 127 |
Msa0320830 | MtrunA17_Chr4g0052341 | 25.486 | 514 | 306 | 17 | 460 | 947 | 747 | 1209 | 2.77e-29 | 127 |
Msa0320830 | MtrunA17_Chr5g0393461 | 24.725 | 546 | 335 | 18 | 446 | 946 | 172 | 686 | 2.86e-29 | 126 |
Msa0320830 | MtrunA17_Chr5g0394201 | 26.141 | 482 | 310 | 16 | 457 | 931 | 362 | 804 | 5.55e-29 | 125 |
Msa0320830 | MtrunA17_Chr5g0442141 | 26.265 | 514 | 300 | 18 | 457 | 943 | 616 | 1077 | 4.93e-27 | 119 |
Msa0320830 | MtrunA17_Chr1g0205891 | 25.673 | 483 | 312 | 17 | 457 | 931 | 375 | 818 | 1.52e-26 | 117 |
Msa0320830 | MtrunA17_Chr1g0163011 | 23.870 | 553 | 354 | 17 | 438 | 940 | 175 | 710 | 2.82e-26 | 115 |
Msa0320830 | MtrunA17_Chr1g0190391 | 27.907 | 215 | 141 | 4 | 452 | 653 | 576 | 789 | 4.20e-26 | 115 |
Msa0320830 | MtrunA17_Chr3g0095091 | 25.000 | 528 | 317 | 19 | 444 | 943 | 555 | 1031 | 2.24e-25 | 114 |
Msa0320830 | MtrunA17_Chr5g0403921 | 24.587 | 484 | 326 | 14 | 457 | 930 | 183 | 637 | 7.19e-24 | 108 |
Msa0320830 | MtrunA17_Chr1g0183681 | 23.944 | 497 | 320 | 15 | 479 | 944 | 410 | 879 | 4.56e-23 | 106 |
Msa0320830 | MtrunA17_Chr4g0066651 | 24.000 | 550 | 332 | 21 | 454 | 969 | 985 | 1482 | 7.47e-21 | 99.8 |
Msa0320830 | MtrunA17_Chr4g0040301 | 36.111 | 180 | 99 | 4 | 796 | 966 | 381 | 553 | 1.67e-20 | 97.4 |
Msa0320830 | MtrunA17_Chr7g0248031 | 25.941 | 505 | 294 | 20 | 454 | 925 | 990 | 1447 | 4.75e-18 | 90.5 |
Msa0320830 | MtrunA17_Chr1g0190381 | 34.177 | 158 | 95 | 2 | 796 | 944 | 189 | 346 | 7.48e-18 | 88.2 |
Msa0320830 | MtrunA17_Chr7g0232121 | 22.792 | 566 | 341 | 24 | 458 | 980 | 39 | 551 | 1.12e-17 | 88.6 |
Msa0320830 | MtrunA17_Chr8g0348721 | 25.000 | 524 | 274 | 21 | 454 | 925 | 983 | 1439 | 2.00e-16 | 85.1 |
Msa0320830 | MtrunA17_Chr1g0175191 | 31.351 | 185 | 109 | 4 | 757 | 931 | 1017 | 1193 | 6.62e-16 | 83.2 |
Msa0320830 | MtrunA17_Chr1g0168031 | 33.333 | 144 | 91 | 2 | 798 | 941 | 990 | 1128 | 2.21e-13 | 74.7 |
Msa0320830 | MtrunA17_Chr2g0281601 | 37.398 | 123 | 72 | 2 | 809 | 931 | 1146 | 1263 | 1.26e-12 | 72.4 |
Msa0320830 | MtrunA17_Chr1g0212331 | 33.858 | 127 | 78 | 3 | 807 | 932 | 880 | 1001 | 1.00e-11 | 69.3 |
Msa0320830 | MtrunA17_Chr2g0320751 | 30.667 | 150 | 97 | 3 | 793 | 941 | 848 | 991 | 1.01e-11 | 69.3 |
Msa0320830 | MtrunA17_Chr7g0224021 | 35.632 | 87 | 43 | 2 | 452 | 527 | 25 | 109 | 1.16e-11 | 62.8 |
Msa0320830 | MtrunA17_Chr7g0255821 | 33.113 | 151 | 92 | 4 | 786 | 932 | 639 | 784 | 1.31e-11 | 68.9 |
Msa0320830 | MtrunA17_Chr4g0024921 | 32.061 | 131 | 84 | 1 | 813 | 943 | 784 | 909 | 7.79e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0320830 | AT2G16390.2 | 64.244 | 688 | 228 | 7 | 316 | 989 | 208 | 891 | 0.0 | 917 |
Msa0320830 | AT2G16390.1 | 64.244 | 688 | 228 | 7 | 316 | 989 | 205 | 888 | 0.0 | 917 |
Msa0320830 | AT2G21450.1 | 54.669 | 664 | 280 | 4 | 348 | 991 | 154 | 816 | 0.0 | 753 |
Msa0320830 | AT2G21450.3 | 54.396 | 671 | 283 | 5 | 341 | 991 | 58 | 725 | 0.0 | 753 |
Msa0320830 | AT2G21450.2 | 54.669 | 664 | 280 | 4 | 348 | 991 | 161 | 823 | 0.0 | 752 |
Msa0320830 | AT1G05490.1 | 30.256 | 704 | 380 | 22 | 331 | 948 | 675 | 1353 | 3.46e-89 | 313 |
Msa0320830 | AT3G42670.4 | 28.404 | 683 | 405 | 14 | 341 | 948 | 539 | 1212 | 6.97e-82 | 290 |
Msa0320830 | AT3G42670.2 | 28.446 | 682 | 404 | 15 | 341 | 948 | 539 | 1210 | 1.02e-81 | 290 |
Msa0320830 | AT3G42670.3 | 28.446 | 682 | 404 | 15 | 341 | 948 | 539 | 1210 | 1.02e-81 | 290 |
Msa0320830 | AT3G42670.1 | 28.446 | 682 | 404 | 15 | 341 | 948 | 539 | 1210 | 1.02e-81 | 290 |
Msa0320830 | AT3G24340.1 | 31.644 | 651 | 378 | 15 | 343 | 948 | 453 | 1081 | 3.60e-80 | 284 |
Msa0320830 | AT5G20420.1 | 29.640 | 695 | 408 | 19 | 336 | 959 | 542 | 1226 | 1.34e-79 | 283 |
Msa0320830 | AT3G32330.1 | 37.283 | 346 | 175 | 4 | 436 | 772 | 1 | 313 | 2.16e-64 | 221 |
Msa0320830 | AT3G32280.1 | 35.870 | 276 | 128 | 2 | 377 | 652 | 248 | 474 | 7.76e-51 | 187 |
Msa0320830 | AT1G08600.4 | 26.598 | 579 | 322 | 17 | 452 | 944 | 712 | 1273 | 1.63e-45 | 179 |
Msa0320830 | AT1G08600.3 | 26.598 | 579 | 322 | 17 | 452 | 944 | 712 | 1273 | 1.63e-45 | 179 |
Msa0320830 | AT1G08600.2 | 26.598 | 579 | 322 | 17 | 452 | 944 | 712 | 1273 | 1.63e-45 | 179 |
Msa0320830 | AT1G08600.1 | 26.170 | 577 | 306 | 18 | 452 | 944 | 712 | 1252 | 9.51e-39 | 157 |
Msa0320830 | AT3G31900.1 | 32.734 | 278 | 127 | 5 | 377 | 654 | 153 | 370 | 6.20e-38 | 147 |
Msa0320830 | AT5G44800.1 | 24.760 | 521 | 323 | 16 | 461 | 960 | 692 | 1164 | 1.81e-28 | 124 |
Msa0320830 | AT4G31900.2 | 25.290 | 518 | 309 | 16 | 458 | 957 | 184 | 641 | 2.01e-28 | 124 |
Msa0320830 | AT4G31900.3 | 25.290 | 518 | 309 | 16 | 458 | 957 | 225 | 682 | 2.98e-28 | 123 |
Msa0320830 | AT4G31900.1 | 25.290 | 518 | 309 | 16 | 458 | 957 | 225 | 682 | 3.15e-28 | 123 |
Msa0320830 | AT5G63950.2 | 24.958 | 589 | 345 | 19 | 410 | 952 | 330 | 867 | 4.28e-27 | 119 |
Msa0320830 | AT2G13370.1 | 25.498 | 502 | 293 | 16 | 458 | 932 | 625 | 1072 | 2.67e-26 | 117 |
Msa0320830 | AT2G13370.2 | 25.498 | 502 | 293 | 16 | 458 | 932 | 625 | 1072 | 2.67e-26 | 117 |
Msa0320830 | AT2G13370.3 | 25.498 | 502 | 293 | 16 | 458 | 932 | 625 | 1072 | 2.67e-26 | 117 |
Msa0320830 | AT3G06010.1 | 25.926 | 486 | 307 | 19 | 457 | 931 | 402 | 845 | 1.19e-25 | 115 |
Msa0320830 | AT2G25170.1 | 24.394 | 578 | 359 | 20 | 408 | 946 | 204 | 742 | 1.28e-25 | 115 |
Msa0320830 | AT2G25170.4 | 24.394 | 578 | 359 | 20 | 408 | 946 | 204 | 742 | 1.28e-25 | 115 |
Msa0320830 | AT2G25170.2 | 24.394 | 578 | 359 | 20 | 408 | 946 | 221 | 759 | 1.97e-25 | 114 |
Msa0320830 | AT2G25170.3 | 24.394 | 578 | 359 | 20 | 408 | 946 | 230 | 768 | 2.19e-25 | 114 |
Msa0320830 | AT5G19310.2 | 25.773 | 485 | 308 | 17 | 457 | 931 | 121 | 563 | 2.02e-24 | 110 |
Msa0320830 | AT5G19310.1 | 25.773 | 485 | 308 | 17 | 457 | 931 | 385 | 827 | 5.59e-24 | 109 |
Msa0320830 | AT2G28290.1 | 24.859 | 531 | 336 | 18 | 457 | 964 | 753 | 1243 | 1.75e-22 | 105 |
Msa0320830 | AT2G28290.6 | 24.859 | 531 | 336 | 18 | 457 | 964 | 754 | 1244 | 1.77e-22 | 105 |
Msa0320830 | AT2G28290.5 | 24.859 | 531 | 336 | 18 | 457 | 964 | 754 | 1244 | 1.78e-22 | 105 |
Msa0320830 | AT2G28290.3 | 24.859 | 531 | 336 | 18 | 457 | 964 | 753 | 1243 | 1.79e-22 | 105 |
Msa0320830 | AT2G28290.4 | 24.859 | 531 | 336 | 18 | 457 | 964 | 753 | 1243 | 1.79e-22 | 105 |
Msa0320830 | AT2G28290.2 | 24.859 | 531 | 336 | 18 | 457 | 964 | 753 | 1243 | 2.12e-22 | 105 |
Msa0320830 | AT2G18760.4 | 24.405 | 504 | 307 | 17 | 479 | 944 | 404 | 871 | 4.23e-22 | 103 |
Msa0320830 | AT2G18760.1 | 24.405 | 504 | 307 | 17 | 479 | 944 | 404 | 871 | 4.23e-22 | 103 |
Msa0320830 | AT2G18760.2 | 24.405 | 504 | 307 | 17 | 479 | 944 | 404 | 871 | 4.23e-22 | 103 |
Msa0320830 | AT2G18760.7 | 24.405 | 504 | 307 | 17 | 479 | 944 | 404 | 871 | 4.23e-22 | 103 |
Msa0320830 | AT2G18760.5 | 24.405 | 504 | 307 | 17 | 479 | 944 | 404 | 871 | 4.23e-22 | 103 |
Msa0320830 | AT2G18760.6 | 24.405 | 504 | 307 | 17 | 479 | 944 | 404 | 871 | 4.23e-22 | 103 |
Msa0320830 | AT2G18760.3 | 24.405 | 504 | 307 | 17 | 479 | 944 | 463 | 930 | 5.91e-22 | 103 |
Msa0320830 | AT1G03750.1 | 37.580 | 157 | 93 | 2 | 790 | 946 | 523 | 674 | 1.51e-20 | 98.2 |
Msa0320830 | AT2G02090.1 | 21.771 | 542 | 357 | 17 | 458 | 949 | 213 | 737 | 2.34e-19 | 94.4 |
Msa0320830 | AT3G19210.3 | 30.137 | 219 | 127 | 5 | 444 | 650 | 166 | 370 | 1.73e-18 | 91.7 |
Msa0320830 | AT3G19210.3 | 26.531 | 147 | 102 | 2 | 801 | 946 | 541 | 682 | 2.20e-11 | 68.6 |
Msa0320830 | AT3G19210.1 | 30.137 | 219 | 127 | 5 | 444 | 650 | 166 | 370 | 2.09e-18 | 91.7 |
Msa0320830 | AT3G19210.1 | 26.531 | 147 | 102 | 2 | 801 | 946 | 541 | 682 | 1.33e-11 | 69.3 |
Msa0320830 | AT3G19210.2 | 30.137 | 219 | 127 | 5 | 444 | 650 | 166 | 370 | 2.20e-18 | 91.3 |
Msa0320830 | AT3G19210.2 | 26.531 | 147 | 102 | 2 | 801 | 946 | 539 | 680 | 1.39e-11 | 69.3 |
Msa0320830 | AT5G66750.1 | 25.046 | 547 | 347 | 20 | 457 | 988 | 201 | 699 | 2.62e-18 | 90.9 |
Msa0320830 | AT2G46020.5 | 25.852 | 499 | 301 | 18 | 454 | 925 | 977 | 1433 | 2.64e-18 | 91.7 |
Msa0320830 | AT2G46020.1 | 25.852 | 499 | 301 | 18 | 454 | 925 | 977 | 1433 | 2.64e-18 | 91.7 |
Msa0320830 | AT2G46020.6 | 25.852 | 499 | 301 | 18 | 454 | 925 | 977 | 1433 | 2.64e-18 | 91.7 |
Msa0320830 | AT2G46020.2 | 25.099 | 506 | 297 | 16 | 454 | 925 | 977 | 1434 | 5.15e-18 | 90.9 |
Msa0320830 | AT2G46020.3 | 25.099 | 506 | 297 | 16 | 454 | 925 | 977 | 1434 | 5.15e-18 | 90.9 |
Msa0320830 | AT2G46020.4 | 25.099 | 506 | 297 | 16 | 454 | 925 | 977 | 1434 | 5.15e-18 | 90.9 |
Msa0320830 | AT5G43530.1 | 37.121 | 132 | 78 | 2 | 810 | 941 | 1126 | 1252 | 8.87e-16 | 83.2 |
Msa0320830 | AT5G63950.1 | 27.559 | 254 | 157 | 7 | 410 | 653 | 330 | 566 | 1.33e-15 | 82.4 |
Msa0320830 | AT5G63950.1 | 31.210 | 157 | 103 | 2 | 796 | 952 | 733 | 884 | 8.80e-13 | 73.2 |
Msa0320830 | AT3G12810.1 | 29.577 | 213 | 126 | 4 | 793 | 989 | 1073 | 1277 | 1.34e-15 | 82.8 |
Msa0320830 | AT3G12810.2 | 29.577 | 213 | 126 | 4 | 793 | 989 | 1069 | 1273 | 1.43e-15 | 82.8 |
Msa0320830 | AT2G44980.1 | 24.390 | 492 | 312 | 22 | 458 | 931 | 51 | 500 | 2.36e-15 | 81.6 |
Msa0320830 | AT1G61140.1 | 33.566 | 143 | 90 | 1 | 810 | 952 | 1122 | 1259 | 5.88e-13 | 73.9 |
Msa0320830 | AT1G61140.3 | 33.813 | 139 | 87 | 1 | 810 | 948 | 964 | 1097 | 7.32e-13 | 73.6 |
Msa0320830 | AT1G11100.3 | 36.066 | 122 | 73 | 2 | 810 | 931 | 971 | 1087 | 1.06e-12 | 73.2 |
Msa0320830 | AT1G11100.5 | 36.066 | 122 | 73 | 2 | 810 | 931 | 927 | 1043 | 1.08e-12 | 73.2 |
Msa0320830 | AT1G11100.1 | 36.066 | 122 | 73 | 2 | 810 | 931 | 1070 | 1186 | 1.25e-12 | 72.8 |
Msa0320830 | AT1G11100.2 | 36.066 | 122 | 73 | 2 | 810 | 931 | 1113 | 1229 | 1.31e-12 | 72.8 |
Msa0320830 | AT1G11100.4 | 36.066 | 122 | 73 | 2 | 810 | 931 | 1114 | 1230 | 1.33e-12 | 72.8 |
Msa0320830 | AT3G20010.2 | 33.871 | 124 | 67 | 2 | 813 | 931 | 603 | 716 | 2.58e-11 | 68.2 |
Msa0320830 | AT3G20010.3 | 33.871 | 124 | 67 | 2 | 813 | 931 | 628 | 741 | 2.61e-11 | 68.2 |
Msa0320830 | AT3G20010.1 | 33.600 | 125 | 68 | 2 | 813 | 932 | 894 | 1008 | 5.49e-11 | 67.4 |
Msa0320830 | AT3G20010.5 | 33.600 | 125 | 68 | 2 | 813 | 932 | 894 | 1008 | 5.49e-11 | 67.4 |
Msa0320830 | AT3G20010.7 | 33.600 | 125 | 68 | 2 | 813 | 932 | 894 | 1008 | 5.49e-11 | 67.4 |
Msa0320830 | AT5G05130.1 | 33.548 | 155 | 94 | 4 | 813 | 964 | 727 | 875 | 5.82e-11 | 67.4 |
Msa0320830 | AT1G05120.2 | 27.222 | 180 | 118 | 3 | 769 | 943 | 679 | 850 | 9.20e-11 | 66.6 |
Msa0320830 | AT1G05120.1 | 27.222 | 180 | 118 | 3 | 769 | 943 | 636 | 807 | 9.46e-11 | 66.6 |
Find 191 sgRNAs with CRISPR-Local
Find 430 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCTTAGAGAGTGGAAAATT+TGG | 0.193521 | 2_4:+21666707 | Msa0320830:CDS |
AACCCAGAAAATGCAAATAT+TGG | 0.211991 | 2_4:+21666760 | Msa0320830:CDS |
TCTGCAATTGGTTTCAAGTC+TGG | 0.267700 | 2_4:-21671278 | None:intergenic |
ACATGAGGAAGAAGATAATA+AGG | 0.284394 | 2_4:+21668673 | Msa0320830:CDS |
TCATCTGAATCAATGATAAA+TGG | 0.290481 | 2_4:-21666983 | None:intergenic |
ATGTAAAAGCCCTGTATAAA+AGG | 0.296271 | 2_4:+21671936 | Msa0320830:CDS |
ATGGAAAATAAGAACGTTAC+TGG | 0.297270 | 2_4:+21666863 | Msa0320830:CDS |
ACATCATAATGTCATAGATT+TGG | 0.300000 | 2_4:+21666892 | Msa0320830:CDS |
TTTCTAGAAAGTCCATTGTT+AGG | 0.301488 | 2_4:+21671908 | Msa0320830:CDS |
AGTCTTTCACACCAGGTAAA+TGG | 0.310452 | 2_4:-21670998 | None:intergenic |
GCAGGAGACTGAACTGGTTT+TGG | 0.312654 | 2_4:-21667385 | None:intergenic |
GTACTGTGGTCTTCCTCTTC+TGG | 0.313307 | 2_4:-21671776 | None:intergenic |
CTTGTATTGGAACTCAAATA+TGG | 0.319708 | 2_4:-21669758 | None:intergenic |
GGTTGAAGCAGGGCGTTTAC+TGG | 0.320667 | 2_4:-21665932 | None:intergenic |
CTGCAATTGGTTTCAAGTCT+GGG | 0.326657 | 2_4:-21671277 | None:intergenic |
TAATGTCATAGATTTGGATT+TGG | 0.328783 | 2_4:+21666898 | Msa0320830:CDS |
TTTCGAAAATGTGGTTTGAA+TGG | 0.333393 | 2_4:+21671819 | Msa0320830:CDS |
AATACTATCGACTTGGAAAA+AGG | 0.333771 | 2_4:+21670545 | Msa0320830:CDS |
GTTTCCATCTTTATAAACTT+TGG | 0.336727 | 2_4:-21670939 | None:intergenic |
ATTACAGTTATCACAGATAA+TGG | 0.340357 | 2_4:-21670712 | None:intergenic |
TCTGTTACTCGTCAAGCTAT+TGG | 0.341013 | 2_4:+21671689 | Msa0320830:CDS |
TTTCCATCTTTATAAACTTT+GGG | 0.344732 | 2_4:-21670938 | None:intergenic |
CTCCTAATGCGTTGGACAAT+AGG | 0.350767 | 2_4:-21670969 | None:intergenic |
AAATAAGAACGTTACTGGTT+TGG | 0.351586 | 2_4:+21666868 | Msa0320830:CDS |
ATCTTCCTCATTTGAATCAA+TGG | 0.354796 | 2_4:-21667119 | None:intergenic |
ATTCAAATGAGGAAGATGAT+AGG | 0.367687 | 2_4:+21667125 | Msa0320830:CDS |
TGTGAAAGACTTCTGTGATT+TGG | 0.367803 | 2_4:+21671010 | Msa0320830:CDS |
GGCAATGCAACTTCATGAAA+TGG | 0.373763 | 2_4:-21667364 | None:intergenic |
CTGGCTCATGCTCCAGGATC+TGG | 0.375281 | 2_4:+21670438 | Msa0320830:CDS |
ATAGTAGTGCAGTACCTTGC+TGG | 0.375718 | 2_4:-21671105 | None:intergenic |
GTTTCTTAAGCAATATATCT+TGG | 0.378503 | 2_4:-21670755 | None:intergenic |
GCACACCGAAAAGGATGTTT+TGG | 0.378651 | 2_4:+21666928 | Msa0320830:CDS |
AGCTGTTATACATGATTTGC+GGG | 0.378708 | 2_4:+21671076 | Msa0320830:CDS |
TCACTACATTTCTCTGCAAT+TGG | 0.379021 | 2_4:-21671290 | None:intergenic |
GTGAGGGTATATCATTGGTT+GGG | 0.379973 | 2_4:+21671627 | Msa0320830:CDS |
AATGTTATCATTGATTCAAA+TGG | 0.380062 | 2_4:+21667310 | Msa0320830:CDS |
ATCAGCTGGTGAGAAGCTTT+TGG | 0.391575 | 2_4:+21671415 | Msa0320830:CDS |
ATTCAGACGAGGAAGATGAT+AGG | 0.395674 | 2_4:+21667227 | Msa0320830:CDS |
CCGCCCAAAGTTTATAAAGA+TGG | 0.396049 | 2_4:+21670935 | Msa0320830:CDS |
TGCATTCTGGCTCATGCTCC+AGG | 0.404134 | 2_4:+21670432 | Msa0320830:CDS |
ATGTTATCATTGATTCAAAT+GGG | 0.404166 | 2_4:+21667311 | Msa0320830:CDS |
ATGATGGGCTAGAAGATGTT+TGG | 0.407958 | 2_4:+21668795 | Msa0320830:CDS |
ACCCAGAAAATGCAAATATT+GGG | 0.408264 | 2_4:+21666761 | Msa0320830:CDS |
TGGAAAGGTTAGCTATGAAA+TGG | 0.408305 | 2_4:+21671471 | Msa0320830:CDS |
TTCTAGAAAGTCCATTGTTA+GGG | 0.412455 | 2_4:+21671909 | Msa0320830:CDS |
GTTATGTTTGTCGCGTTTGT+GGG | 0.414777 | 2_4:+21669713 | Msa0320830:CDS |
AAAGACAAAGGTAATTATGT+TGG | 0.435675 | 2_4:+21668647 | Msa0320830:intron |
TCACCCCGTCTCTCACATCT+TGG | 0.439166 | 2_4:-21671355 | None:intergenic |
AGGAATTAATTTCGAAAATG+TGG | 0.440301 | 2_4:+21671810 | Msa0320830:CDS |
ATGAATGTCTTTCCAGATCC+TGG | 0.441533 | 2_4:-21670450 | None:intergenic |
AACCTATTGTCCAACGCATT+AGG | 0.441584 | 2_4:+21670967 | Msa0320830:CDS |
TCATCTAAAATGAGAATTGA+CGG | 0.441909 | 2_4:-21670777 | None:intergenic |
ACCTCTCGTGGTGCTTCCTA+AGG | 0.442095 | 2_4:+21670521 | Msa0320830:CDS |
ACCTGGTGGGAGACCATCCT+GGG | 0.448352 | 2_4:+21670406 | Msa0320830:CDS |
AAATGGAAGGGCTGGAGTCT+TGG | 0.448957 | 2_4:+21671488 | Msa0320830:CDS |
TCTAATGCAGGAGACTGAAC+TGG | 0.453819 | 2_4:-21667391 | None:intergenic |
GGTTATGTTTGTCGCGTTTG+TGG | 0.457173 | 2_4:+21669712 | Msa0320830:CDS |
ACCACGAGAGGTCGTGCATC+GGG | 0.459021 | 2_4:-21670510 | None:intergenic |
CATATTTGAGTTCCAATACA+AGG | 0.465416 | 2_4:+21669759 | Msa0320830:CDS |
ACCAGTGTCTAACCTTGTAT+TGG | 0.466307 | 2_4:-21669771 | None:intergenic |
AACCTGGTGGGAGACCATCC+TGG | 0.468533 | 2_4:+21670405 | Msa0320830:CDS |
TCTTCATCATGATCATCTGT+TGG | 0.469032 | 2_4:-21667040 | None:intergenic |
TTCTCCTCCATGGTAAGCAT+TGG | 0.471176 | 2_4:-21668573 | None:intergenic |
ATGAAGTTAAGACAATAAAG+AGG | 0.472373 | 2_4:+21671204 | Msa0320830:CDS |
CAAGTCGATAGTATTCCCTT+AGG | 0.474320 | 2_4:-21670537 | None:intergenic |
AAGGTACTGCACTACTATAA+AGG | 0.474619 | 2_4:+21671110 | Msa0320830:CDS |
TTCAGATGAGGAGGATGATA+AGG | 0.476090 | 2_4:+21666997 | Msa0320830:CDS |
CCCCAGGATGGTCTCCCACC+AGG | 0.479756 | 2_4:-21670407 | None:intergenic |
CTTTCCGACCAGGCCAGAAA+AGG | 0.480032 | 2_4:+21671717 | Msa0320830:CDS |
CTTACAATCATTTCTAATGC+AGG | 0.480541 | 2_4:-21667403 | None:intergenic |
ATTGGCCGTGCTTTCCGACC+AGG | 0.480741 | 2_4:+21671707 | Msa0320830:CDS |
AATGTAATACCGGTTGAAGC+AGG | 0.482687 | 2_4:-21665943 | None:intergenic |
AAAGCTTCTCACCAGCTGAT+TGG | 0.482830 | 2_4:-21671412 | None:intergenic |
TAGCTATGAAATGGAAGGGC+TGG | 0.483976 | 2_4:+21671480 | Msa0320830:CDS |
TGACAGTAGATCACAACAAT+TGG | 0.483985 | 2_4:+21670626 | Msa0320830:CDS |
AGGATCTGGAAAGACATTCA+TGG | 0.485077 | 2_4:+21670452 | Msa0320830:CDS |
CTAAGGGAATACTATCGACT+TGG | 0.486814 | 2_4:+21670538 | Msa0320830:CDS |
AGTAAACGCCCTGCTTCAAC+CGG | 0.489413 | 2_4:+21665934 | Msa0320830:CDS |
GAACTTATATGTCTGAATCA+TGG | 0.492636 | 2_4:+21670244 | Msa0320830:CDS |
TGCCTCTAAAATATTTGGAA+AGG | 0.493636 | 2_4:+21671456 | Msa0320830:CDS |
ACTGTTGGTATCCTAAGAAA+AGG | 0.496655 | 2_4:-21670683 | None:intergenic |
ATGATAATGACTTCATGAAA+TGG | 0.499153 | 2_4:-21667202 | None:intergenic |
GATCTGCATGTTCTCCTCCA+TGG | 0.504352 | 2_4:-21668583 | None:intergenic |
TTCATTTGCTTTGCATGTCG+AGG | 0.504870 | 2_4:-21670345 | None:intergenic |
TCATAGATTTGGATTTGGAC+GGG | 0.504963 | 2_4:+21666903 | Msa0320830:CDS |
GGTGAGGGTATATCATTGGT+TGG | 0.506967 | 2_4:+21671626 | Msa0320830:CDS |
TCTCCTCCATGGTAAGCATT+GGG | 0.510319 | 2_4:-21668572 | None:intergenic |
GTCATAGATTTGGATTTGGA+CGG | 0.511781 | 2_4:+21666902 | Msa0320830:CDS |
TCAGGAATTTCGCCTGAAGA+AGG | 0.514055 | 2_4:+21666620 | Msa0320830:intron |
GACGAGTAACAGACGGGTTG+AGG | 0.521054 | 2_4:-21671679 | None:intergenic |
TAGATGAGGGACACACTCCT+AGG | 0.521780 | 2_4:+21670793 | Msa0320830:CDS |
CGAACCAAGATGTGAGAGAC+GGG | 0.522137 | 2_4:+21671351 | Msa0320830:CDS |
ATGACTTCATGAAATGGTGC+TGG | 0.522586 | 2_4:-21667196 | None:intergenic |
TAGCTGTTATACATGATTTG+CGG | 0.523136 | 2_4:+21671075 | Msa0320830:CDS |
AAGTTTGACACTGAAGATGA+TGG | 0.523959 | 2_4:+21668779 | Msa0320830:CDS |
GGAGGACTCCCTTTGTTCAG+TGG | 0.524408 | 2_4:-21671543 | None:intergenic |
GAGGGAGATGGCAATGGCAA+TGG | 0.526773 | 2_4:+21668817 | Msa0320830:CDS |
TTATAAACTTTGGGCGGACA+AGG | 0.528879 | 2_4:-21670929 | None:intergenic |
TTCAAATGAGGAAGATGATA+GGG | 0.531045 | 2_4:+21667126 | Msa0320830:CDS |
AGAATCGTCCACTGAACAAA+GGG | 0.535424 | 2_4:+21671535 | Msa0320830:CDS |
TTGGTTTCAAGTCTGGGTGC+AGG | 0.536173 | 2_4:-21671271 | None:intergenic |
TGTTACCATTGATTCAAATG+AGG | 0.536803 | 2_4:+21667114 | Msa0320830:CDS |
GAGGAGGATGATAAGGATCA+TGG | 0.536967 | 2_4:+21667004 | Msa0320830:CDS |
CCACAGTACTTGTGTCAAGA+AGG | 0.540817 | 2_4:+21671790 | Msa0320830:CDS |
GTATCAGTATTCTCGTTCCT+AGG | 0.541700 | 2_4:-21670810 | None:intergenic |
TGAGGGTATATCATTGGTTG+GGG | 0.542484 | 2_4:+21671628 | Msa0320830:CDS |
ATGGGCTAGAAGATGTTTGG+AGG | 0.543775 | 2_4:+21668798 | Msa0320830:CDS |
TTCAGACGAGGAAGATGATA+GGG | 0.544307 | 2_4:+21667228 | Msa0320830:CDS |
GGACGGGGAGCACACCGAAA+AGG | 0.549194 | 2_4:+21666919 | Msa0320830:CDS |
CACCACGAGAGGTCGTGCAT+CGG | 0.550292 | 2_4:-21670511 | None:intergenic |
GGATCCTACTCCTAATGCGT+TGG | 0.553435 | 2_4:-21670977 | None:intergenic |
CATAGATTTGGATTTGGACG+GGG | 0.557112 | 2_4:+21666904 | Msa0320830:CDS |
TTCTATATCTGAGCATACAA+TGG | 0.558790 | 2_4:+21671316 | Msa0320830:CDS |
AGCTGCTGATTCTCCAGAAG+AGG | 0.560162 | 2_4:+21671763 | Msa0320830:CDS |
AAACACTTTGCAGAAGGACC+CGG | 0.561229 | 2_4:+21671037 | Msa0320830:CDS |
TATCATTGATTCAGATGAGG+AGG | 0.561761 | 2_4:+21666988 | Msa0320830:CDS |
AAAGACAAAGGTGTTTACAT+TGG | 0.561970 | 2_4:+21668734 | Msa0320830:CDS |
GTTATAAATCGCTTAGAGAG+TGG | 0.562015 | 2_4:+21666698 | Msa0320830:CDS |
TCTGGCCTGGTCGGAAAGCA+CGG | 0.562735 | 2_4:-21671712 | None:intergenic |
GGTTGAAAACACTTTGCAGA+AGG | 0.564686 | 2_4:+21671031 | Msa0320830:CDS |
TTTACATCTTCCCCTAACAA+TGG | 0.567105 | 2_4:-21671920 | None:intergenic |
CATGATCCCAATGCTTACCA+TGG | 0.571021 | 2_4:+21668566 | Msa0320830:CDS |
ACAGTAAAATCAACTAGGCC+AGG | 0.571652 | 2_4:-21671152 | None:intergenic |
TCAATCAAAGCATGTGGTGA+GGG | 0.572090 | 2_4:+21671611 | Msa0320830:CDS |
AGATCATCCACCCGAAGAAG+AGG | 0.572717 | 2_4:+21669642 | Msa0320830:CDS |
TGAACAAAGGGAGTCCTCCA+TGG | 0.573018 | 2_4:+21671547 | Msa0320830:CDS |
CCTCTCGTGGTGCTTCCTAA+GGG | 0.575239 | 2_4:+21670522 | Msa0320830:CDS |
AATAGTTGATTAGCAAGTCT+AGG | 0.577621 | 2_4:-21666803 | None:intergenic |
TGGGCTAGAAGATGTTTGGA+GGG | 0.578388 | 2_4:+21668799 | Msa0320830:CDS |
TCAACTATTCAGAGTGGTGA+CGG | 0.581469 | 2_4:+21666817 | Msa0320830:CDS |
CTGAATCTATGCCAATCAGC+TGG | 0.587383 | 2_4:+21671401 | Msa0320830:CDS |
GGAGTTTCTGACATGGCAAG+TGG | 0.588515 | 2_4:+21670566 | Msa0320830:CDS |
GAAAATTGAATCCTTCGACT+TGG | 0.592086 | 2_4:-21670374 | None:intergenic |
AGAAGATGTTTGGAGGGAGA+TGG | 0.593018 | 2_4:+21668805 | Msa0320830:CDS |
AAGGTTAGCTATGAAATGGA+AGG | 0.595000 | 2_4:+21671475 | Msa0320830:CDS |
ATGTAATACCGGTTGAAGCA+GGG | 0.596547 | 2_4:-21665942 | None:intergenic |
TCCCGATGCACGACCTCTCG+TGG | 0.597869 | 2_4:+21670509 | Msa0320830:CDS |
TTGTCCAACGCATTAGGAGT+AGG | 0.597875 | 2_4:+21670973 | Msa0320830:CDS |
TAGGAACGAGAATACTGATA+CGG | 0.598994 | 2_4:+21670812 | Msa0320830:CDS |
GAGAATCGTCCACTGAACAA+AGG | 0.601522 | 2_4:+21671534 | Msa0320830:CDS |
ATGTGGTGAGGGTATATCAT+TGG | 0.601963 | 2_4:+21671622 | Msa0320830:CDS |
ATGAAACCGCACCAAGTCGA+AGG | 0.602444 | 2_4:+21670363 | Msa0320830:CDS |
AGATAATGGACGAAAACTGT+TGG | 0.602446 | 2_4:-21670698 | None:intergenic |
AGGAGTAGGATCCATTTACC+TGG | 0.603942 | 2_4:+21670987 | Msa0320830:CDS |
TGAAGTTAAGACAATAAAGA+GGG | 0.605026 | 2_4:+21671205 | Msa0320830:CDS |
TGTTTACATTGGTGTACATG+AGG | 0.605749 | 2_4:+21668745 | Msa0320830:CDS |
ATTTATCATTGATTCAGATG+AGG | 0.606144 | 2_4:+21666985 | Msa0320830:CDS |
TTGAATCCTTCGACTTGGTG+CGG | 0.606513 | 2_4:-21670369 | None:intergenic |
GGAAGTCTTAAAACAGTGGG+TGG | 0.608781 | 2_4:+21670647 | Msa0320830:CDS |
AGTTGAGACAGTTGATGTGA+AGG | 0.609517 | 2_4:+21671871 | Msa0320830:CDS |
TTTATATCAAAATCATGTCA+AGG | 0.609653 | 2_4:+21670887 | Msa0320830:CDS |
TAATTATGTTGGAGTACATG+AGG | 0.612315 | 2_4:+21668658 | Msa0320830:CDS |
TTTGGGTCAATCAAAGCATG+TGG | 0.612350 | 2_4:+21671605 | Msa0320830:CDS |
ATTGGAAGTCTTAAAACAGT+GGG | 0.613903 | 2_4:+21670644 | Msa0320830:CDS |
AAGTTCAAGATGTCTTCTGT+AGG | 0.616210 | 2_4:+21671236 | Msa0320830:CDS |
GTTTGTGGGGTTATTGACAG+AGG | 0.616734 | 2_4:+21669727 | Msa0320830:CDS |
GCGAACCAAGATGTGAGAGA+CGG | 0.616830 | 2_4:+21671350 | Msa0320830:CDS |
GTCAATCAAAGCATGTGGTG+AGG | 0.617648 | 2_4:+21671610 | Msa0320830:CDS |
AGTTTGACACTGAAGATGAT+GGG | 0.618200 | 2_4:+21668780 | Msa0320830:CDS |
TGTTATCATTGATTCAAATG+GGG | 0.619334 | 2_4:+21667312 | Msa0320830:CDS |
ACAGTTGATGTGAAGGAATG+TGG | 0.620738 | 2_4:+21671878 | Msa0320830:CDS |
TGATGAAGAAACTCCCAACA+TGG | 0.622428 | 2_4:+21666844 | Msa0320830:CDS |
TGATGAAGAAACTCCCAACA+TGG | 0.622428 | 2_4:+21667255 | Msa0320830:CDS |
TTTGAATGGAATGAATATTG+TGG | 0.623573 | 2_4:+21671833 | Msa0320830:CDS |
TGAAGCAGGGCGTTTACTGG+AGG | 0.624359 | 2_4:-21665929 | None:intergenic |
CCATCTTTATAAACTTTGGG+CGG | 0.625396 | 2_4:-21670935 | None:intergenic |
GCACCACAGTAAAATCAACT+AGG | 0.627117 | 2_4:-21671157 | None:intergenic |
TAGCTTGACGAGTAACAGAC+GGG | 0.631651 | 2_4:-21671685 | None:intergenic |
TCACAGAAGTCTTTCACACC+AGG | 0.631873 | 2_4:-21671005 | None:intergenic |
GATAACACAAAGAAAGACAA+AGG | 0.636337 | 2_4:+21668722 | Msa0320830:CDS |
TTTCTTGTCAGAAACCTGGT+GGG | 0.638542 | 2_4:+21670393 | Msa0320830:CDS |
ACATCACCATGTGTTAAACA+TGG | 0.639224 | 2_4:-21666677 | None:intergenic |
CCCTTAGGAAGCACCACGAG+AGG | 0.643968 | 2_4:-21670522 | None:intergenic |
AATTGGAAGTCTTAAAACAG+TGG | 0.644070 | 2_4:+21670643 | Msa0320830:CDS |
ATAGCTTGACGAGTAACAGA+CGG | 0.650423 | 2_4:-21671686 | None:intergenic |
AGGTTAGCTATGAAATGGAA+GGG | 0.651392 | 2_4:+21671476 | Msa0320830:CDS |
GATCCCAATGCTTACCATGG+AGG | 0.651668 | 2_4:+21668569 | Msa0320830:CDS |
CATTATCATCGATTCAGACG+AGG | 0.657741 | 2_4:+21667216 | Msa0320830:CDS |
TGTTTGGAGGGAGATGGCAA+TGG | 0.662485 | 2_4:+21668811 | Msa0320830:CDS |
TTATGTTTGTCGCGTTTGTG+GGG | 0.662905 | 2_4:+21669714 | Msa0320830:CDS |
CCTGGTGGGAGACCATCCTG+GGG | 0.668528 | 2_4:+21670407 | Msa0320830:CDS |
CCTTCTTGACACAAGTACTG+TGG | 0.673674 | 2_4:-21671790 | None:intergenic |
ACTTCATGAAATGGTGCTGG+AGG | 0.677441 | 2_4:-21667193 | None:intergenic |
AAAATTCAACAATTCACCCG+AGG | 0.695204 | 2_4:+21671571 | Msa0320830:CDS |
AGCTTGCCATGTTTAACACA+TGG | 0.699668 | 2_4:+21666671 | Msa0320830:CDS |
TGCTAATCAACTATTCAGAG+TGG | 0.701124 | 2_4:+21666811 | Msa0320830:CDS |
TCTAGAAAGTCCATTGTTAG+GGG | 0.705989 | 2_4:+21671910 | Msa0320830:CDS |
CTGGTGGGAGACCATCCTGG+GGG | 0.719970 | 2_4:+21670408 | Msa0320830:CDS |
TTTGCGGGAGATGACCAGCA+AGG | 0.730371 | 2_4:+21671091 | Msa0320830:CDS |
GAACCAAGATGTGAGAGACG+GGG | 0.738263 | 2_4:+21671352 | Msa0320830:CDS |
ATATCAAAATCATGTCAAGG+AGG | 0.742826 | 2_4:+21670890 | Msa0320830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAAATAAAATAAA+TGG | + | chr2_4:21668130-21668149 | Msa0320830:intron | 0.0% |
!! | AAAAAAAAAAAAATCCTTAA+TGG | + | chr2_4:21666555-21666574 | Msa0320830:intron | 10.0% |
!! | ACATATTAAAGTAAAAAATA+AGG | - | chr2_4:21667623-21667642 | None:intergenic | 10.0% |
!! | AATTATATATTGGAAAATAT+TGG | + | chr2_4:21668107-21668126 | Msa0320830:intron | 10.0% |
!! | AAAAAATATATATTGATCCA+TGG | - | chr2_4:21666172-21666191 | None:intergenic | 15.0% |
!! | TTACTTTAATATGTATAAAG+TGG | + | chr2_4:21667629-21667648 | Msa0320830:intron | 15.0% |
!! | AATGTATAACTTATCATTAT+AGG | + | chr2_4:21667789-21667808 | Msa0320830:intron | 15.0% |
!! | TAGTTATGCAAATTATATAT+TGG | + | chr2_4:21668097-21668116 | Msa0320830:intron | 15.0% |
!! | AATAAAATAAATGGATATTG+TGG | + | chr2_4:21668139-21668158 | Msa0320830:intron | 15.0% |
!! | TCATTAACAGATATATATTA+AGG | - | chr2_4:21668972-21668991 | None:intergenic | 15.0% |
!! | TAAAATAATTTCTATGCATA+TGG | + | chr2_4:21669420-21669439 | Msa0320830:intron | 15.0% |
!!! | AAAGAAATTTTTGTAATATC+AGG | + | chr2_4:21671512-21671531 | Msa0320830:CDS | 15.0% |
!!! | TAGCTAAAAACAATGATTTT+AGG | + | chr2_4:21666002-21666021 | Msa0320830:intron | 20.0% |
!!! | AGCTAAAAACAATGATTTTA+GGG | + | chr2_4:21666003-21666022 | Msa0320830:intron | 20.0% |
!!! | CTTTTTTTTAGAAATGTGTT+TGG | + | chr2_4:21666279-21666298 | Msa0320830:intron | 20.0% |
!!! | GTTTGATAGTAACAAAAAAA+GGG | - | chr2_4:21666307-21666326 | None:intergenic | 20.0% |
!!! | AACTTTATCATTTCATTTTC+AGG | - | chr2_4:21666427-21666446 | None:intergenic | 20.0% |
!! | AATACATGAATAAGAACAAA+TGG | - | chr2_4:21666501-21666520 | None:intergenic | 20.0% |
!!! | ATCAATGATAACATTTTGAT+CGG | - | chr2_4:21667305-21667324 | None:intergenic | 20.0% |
!!! | AATGTTATCATTGATTCAAA+TGG | + | chr2_4:21667310-21667329 | Msa0320830:CDS | 20.0% |
!!! | ATGTTATCATTGATTCAAAT+GGG | + | chr2_4:21667311-21667330 | Msa0320830:CDS | 20.0% |
!! | TAAAATGAAGTACAATAGTT+CGG | - | chr2_4:21667499-21667518 | None:intergenic | 20.0% |
!! | AATTTAGTCTGACATATATT+TGG | + | chr2_4:21667683-21667702 | Msa0320830:intron | 20.0% |
!!! | CTCTTACAATATAAATTTTC+TGG | + | chr2_4:21668059-21668078 | Msa0320830:intron | 20.0% |
!! | AACATGTTTGGAAAAATAAA+TGG | - | chr2_4:21668276-21668295 | None:intergenic | 20.0% |
!! | AGTGAAAAGAAAAGAAAAAA+AGG | - | chr2_4:21668409-21668428 | None:intergenic | 20.0% |
!! | GAAATAATATGAAGAAAAAC+AGG | - | chr2_4:21668936-21668955 | None:intergenic | 20.0% |
!! | AAATATGCATTACATTAACT+AGG | - | chr2_4:21669245-21669264 | None:intergenic | 20.0% |
!!! | TTTTACTCATTATATTCCTT+TGG | + | chr2_4:21669577-21669596 | Msa0320830:intron | 20.0% |
!! | TTTACTCATTATATTCCTTT+GGG | + | chr2_4:21669578-21669597 | Msa0320830:intron | 20.0% |
!! | TGTCTTAAAATTAGATTCAT+AGG | + | chr2_4:21669870-21669889 | Msa0320830:intron | 20.0% |
!! | AACCTTCAATAAAATTGATA+CGG | - | chr2_4:21670211-21670230 | None:intergenic | 20.0% |
!!! | AAATATATCAGCTTTTTCTT+TGG | - | chr2_4:21670274-21670293 | None:intergenic | 20.0% |
!! | AAAGAAAAAGCTGATATATT+TGG | + | chr2_4:21670273-21670292 | Msa0320830:CDS | 20.0% |
!! | TTTATATCAAAATCATGTCA+AGG | + | chr2_4:21670887-21670906 | Msa0320830:CDS | 20.0% |
!! | TTTCCATCTTTATAAACTTT+GGG | - | chr2_4:21670941-21670960 | None:intergenic | 20.0% |
!! | TACAAAAAATTATGTAAGAG+TGG | - | chr2_4:21671967-21671986 | None:intergenic | 20.0% |
! | GAAAAAAGAAAGAGAAAGAA+TGG | - | chr2_4:21665972-21665991 | None:intergenic | 25.0% |
!! | ATTTGTTACAGATTATTTCG+AGG | - | chr2_4:21666114-21666133 | None:intergenic | 25.0% |
! | TCGAAATAATCTGTAACAAA+TGG | + | chr2_4:21666113-21666132 | Msa0320830:intron | 25.0% |
! | CGAAATAATCTGTAACAAAT+GGG | + | chr2_4:21666114-21666133 | Msa0320830:intron | 25.0% |
!! | AACTGTATTTGTAACTTGTA+AGG | + | chr2_4:21666256-21666275 | Msa0320830:intron | 25.0% |
!! | GGTTTGATAGTAACAAAAAA+AGG | - | chr2_4:21666308-21666327 | None:intergenic | 25.0% |
! | CAAGATACTAATATCCATTA+AGG | - | chr2_4:21666572-21666591 | None:intergenic | 25.0% |
!!! | ACATTTCATTTTCTGAAATC+AGG | + | chr2_4:21666602-21666621 | Msa0320830:intron | 25.0% |
! | ACATCATAATGTCATAGATT+TGG | + | chr2_4:21666892-21666911 | Msa0320830:CDS | 25.0% |
! | TAATGTCATAGATTTGGATT+TGG | + | chr2_4:21666898-21666917 | Msa0320830:CDS | 25.0% |
! | TCATCTGAATCAATGATAAA+TGG | - | chr2_4:21666986-21667005 | None:intergenic | 25.0% |
!!! | ATTTATCATTGATTCAGATG+AGG | + | chr2_4:21666985-21667004 | Msa0320830:CDS | 25.0% |
!!! | ATCAATGGTAACATTTTGAT+GGG | - | chr2_4:21667107-21667126 | None:intergenic | 25.0% |
!! | AATCAATGGTAACATTTTGA+TGG | - | chr2_4:21667108-21667127 | None:intergenic | 25.0% |
!! | GGATCAAAAAAAGGATATTT+TGG | + | chr2_4:21667147-21667166 | Msa0320830:CDS | 25.0% |
!! | ATGATAATGACTTCATGAAA+TGG | - | chr2_4:21667205-21667224 | None:intergenic | 25.0% |
!!! | ACTTTTTCATTTTCCATGTT+GGG | - | chr2_4:21667271-21667290 | None:intergenic | 25.0% |
!!! | AACTTTTTCATTTTCCATGT+TGG | - | chr2_4:21667272-21667291 | None:intergenic | 25.0% |
!!! | TGTTATCATTGATTCAAATG+GGG | + | chr2_4:21667312-21667331 | Msa0320830:CDS | 25.0% |
! | TTTAAACACACCTTTCATTT+GGG | + | chr2_4:21667448-21667467 | Msa0320830:intron | 25.0% |
! | AACTTATCATTATAGGTCTT+TGG | + | chr2_4:21667796-21667815 | Msa0320830:intron | 25.0% |
! | TATCAAATGATTACCAAGTT+GGG | - | chr2_4:21668029-21668048 | None:intergenic | 25.0% |
! | ATATCAAATGATTACCAAGT+TGG | - | chr2_4:21668030-21668049 | None:intergenic | 25.0% |
!! | TATTTTTCCAAACATGTTGT+AGG | + | chr2_4:21668278-21668297 | Msa0320830:intron | 25.0% |
! | TAATACAAAGAATCTTACCA+AGG | - | chr2_4:21668346-21668365 | None:intergenic | 25.0% |
! | TTGGTAAGATTCTTTGTATT+AGG | + | chr2_4:21668345-21668364 | Msa0320830:intron | 25.0% |
! | AAAGACAAAGGTAATTATGT+TGG | + | chr2_4:21668647-21668666 | Msa0320830:intron | 25.0% |
!! | CATTTTCCTTATGAAAACAA+GGG | + | chr2_4:21669005-21669024 | Msa0320830:intron | 25.0% |
!! | ATTTTCCTTATGAAAACAAG+GGG | + | chr2_4:21669006-21669025 | Msa0320830:intron | 25.0% |
! | ATCATAATTCAGAAGATTTC+AGG | - | chr2_4:21669283-21669302 | None:intergenic | 25.0% |
! | TTAAACTAAATCAATCCCAA+AGG | - | chr2_4:21669596-21669615 | None:intergenic | 25.0% |
!!! | TTCATTTTAAAAGACGATCT+TGG | + | chr2_4:21669691-21669710 | Msa0320830:CDS | 25.0% |
! | ACAGAATCTCTTATAGTTTA+TGG | + | chr2_4:21669959-21669978 | Msa0320830:intron | 25.0% |
! | ACCAAACCAAAATGATAAAA+TGG | + | chr2_4:21670080-21670099 | Msa0320830:intron | 25.0% |
!!! | AATGTGCCATTTTATCATTT+TGG | - | chr2_4:21670089-21670108 | None:intergenic | 25.0% |
! | AAATGATAAAATGGCACATT+AGG | + | chr2_4:21670089-21670108 | Msa0320830:intron | 25.0% |
!! | TACCGTATCAATTTTATTGA+AGG | + | chr2_4:21670206-21670225 | Msa0320830:intron | 25.0% |
! | ACACTGTAAAAATCATAAAG+TGG | - | chr2_4:21670600-21670619 | None:intergenic | 25.0% |
!! | TTATGATTTTTACAGTGTGA+AGG | + | chr2_4:21670602-21670621 | Msa0320830:CDS | 25.0% |
! | ATTACAGTTATCACAGATAA+TGG | - | chr2_4:21670715-21670734 | None:intergenic | 25.0% |
! | GTTTCTTAAGCAATATATCT+TGG | - | chr2_4:21670758-21670777 | None:intergenic | 25.0% |
!! | TCATCTAAAATGAGAATTGA+CGG | - | chr2_4:21670780-21670799 | None:intergenic | 25.0% |
!! | TCAATTCTCATTTTAGATGA+GGG | + | chr2_4:21670780-21670799 | Msa0320830:CDS | 25.0% |
!!! | ATGATTTTGATATAAAGTCC+CGG | - | chr2_4:21670883-21670902 | None:intergenic | 25.0% |
! | GTTTCCATCTTTATAAACTT+TGG | - | chr2_4:21670942-21670961 | None:intergenic | 25.0% |
! | ATGAAGTTAAGACAATAAAG+AGG | + | chr2_4:21671204-21671223 | Msa0320830:CDS | 25.0% |
! | TGAAGTTAAGACAATAAAGA+GGG | + | chr2_4:21671205-21671224 | Msa0320830:CDS | 25.0% |
!!! | TCTTTTGCCTCTAAAATATT+TGG | + | chr2_4:21671451-21671470 | Msa0320830:CDS | 25.0% |
!!! | AACCTTTCCAAATATTTTAG+AGG | - | chr2_4:21671461-21671480 | None:intergenic | 25.0% |
!! | TGAATTGTTGAATTTTTCCA+TGG | - | chr2_4:21671567-21671586 | None:intergenic | 25.0% |
! | AGGAATTAATTTCGAAAATG+TGG | + | chr2_4:21671810-21671829 | Msa0320830:CDS | 25.0% |
! | TTTGAATGGAATGAATATTG+TGG | + | chr2_4:21671833-21671852 | Msa0320830:CDS | 25.0% |
AGAATGGAAGAATGTAATAC+CGG | - | chr2_4:21665956-21665975 | None:intergenic | 30.0% | |
!!! | TAGGGAGAATCACATTTTTT+AGG | + | chr2_4:21666021-21666040 | Msa0320830:intron | 30.0% |
ATATATTGATCCATGGACAA+TGG | - | chr2_4:21666165-21666184 | None:intergenic | 30.0% | |
! | TACTATCAAACCTTTCTAGT+AGG | + | chr2_4:21666316-21666335 | Msa0320830:intron | 30.0% |
! | ACTATCAAACCTTTCTAGTA+GGG | + | chr2_4:21666317-21666336 | Msa0320830:intron | 30.0% |
TTAGTCTCGAAATGAAATGA+GGG | + | chr2_4:21666454-21666473 | Msa0320830:intron | 30.0% | |
!! | TTTCAGATTGCTTAGTTTTC+TGG | + | chr2_4:21666519-21666538 | Msa0320830:intron | 30.0% |
! | TTTGCATTTTCTGGGTTATA+AGG | - | chr2_4:21666757-21666776 | None:intergenic | 30.0% |
AACCCAGAAAATGCAAATAT+TGG | + | chr2_4:21666760-21666779 | Msa0320830:CDS | 30.0% | |
ACCCAGAAAATGCAAATATT+GGG | + | chr2_4:21666761-21666780 | Msa0320830:CDS | 30.0% | |
! | TAGGACATTTTGCAATGTAA+GGG | - | chr2_4:21666787-21666806 | None:intergenic | 30.0% |
AATAGTTGATTAGCAAGTCT+AGG | - | chr2_4:21666806-21666825 | None:intergenic | 30.0% | |
!!! | ACGTTCTTATTTTCCATGTT+GGG | - | chr2_4:21666860-21666879 | None:intergenic | 30.0% |
!!! | AACGTTCTTATTTTCCATGT+TGG | - | chr2_4:21666861-21666880 | None:intergenic | 30.0% |
ATGGAAAATAAGAACGTTAC+TGG | + | chr2_4:21666863-21666882 | Msa0320830:CDS | 30.0% | |
! | AAATAAGAACGTTACTGGTT+TGG | + | chr2_4:21666868-21666887 | Msa0320830:CDS | 30.0% |
!!! | GCTTTTTCACTTTCAATGTA+GGG | - | chr2_4:21667070-21667089 | None:intergenic | 30.0% |
!!! | AGCTTTTTCACTTTCAATGT+AGG | - | chr2_4:21667071-21667090 | None:intergenic | 30.0% |
!! | TGTTACCATTGATTCAAATG+AGG | + | chr2_4:21667114-21667133 | Msa0320830:CDS | 30.0% |
ATCTTCCTCATTTGAATCAA+TGG | - | chr2_4:21667122-21667141 | None:intergenic | 30.0% | |
ATTCAAATGAGGAAGATGAT+AGG | + | chr2_4:21667125-21667144 | Msa0320830:CDS | 30.0% | |
TTCAAATGAGGAAGATGATA+GGG | + | chr2_4:21667126-21667145 | Msa0320830:CDS | 30.0% | |
AGATGATAGGGATCAAAAAA+AGG | + | chr2_4:21667138-21667157 | Msa0320830:CDS | 30.0% | |
! | GGAACATTGTTTTCTCTTTT+CGG | - | chr2_4:21667175-21667194 | None:intergenic | 30.0% |
CTTACAATCATTTCTAATGC+AGG | - | chr2_4:21667406-21667425 | None:intergenic | 30.0% | |
TTTAAAGGATTGCAAAAGCA+GGG | - | chr2_4:21667434-21667453 | None:intergenic | 30.0% | |
! | CAAATGAAAGGTGTGTTTAA+AGG | - | chr2_4:21667449-21667468 | None:intergenic | 30.0% |
CTTTAAACACACCTTTCATT+TGG | + | chr2_4:21667447-21667466 | Msa0320830:intron | 30.0% | |
! | CTTCATTTTACCATTTGTGA+CGG | + | chr2_4:21667509-21667528 | Msa0320830:intron | 30.0% |
ATGTATAAAGTGGAATCTTC+TGG | + | chr2_4:21667639-21667658 | Msa0320830:intron | 30.0% | |
GTCAGACTAAATTATATCTC+TGG | - | chr2_4:21667676-21667695 | None:intergenic | 30.0% | |
TAGTCTGACATATATTTGGA+AGG | + | chr2_4:21667687-21667706 | Msa0320830:intron | 30.0% | |
TTATTGCATAGCCTAAATGT+TGG | + | chr2_4:21667851-21667870 | Msa0320830:intron | 30.0% | |
CTAAGAGAAATCCAACATTT+AGG | - | chr2_4:21667865-21667884 | None:intergenic | 30.0% | |
TAAAAACGCACATGATTCAA+TGG | - | chr2_4:21667906-21667925 | None:intergenic | 30.0% | |
TCATAGGAGTAAAGGAAAAA+AGG | - | chr2_4:21668202-21668221 | None:intergenic | 30.0% | |
!!! | TTTTTTCCTTTACTCCTATG+AGG | + | chr2_4:21668201-21668220 | Msa0320830:intron | 30.0% |
CTGAACGATGAACAATATAT+GGG | + | chr2_4:21668245-21668264 | Msa0320830:intron | 30.0% | |
TGAACGATGAACAATATATG+GGG | + | chr2_4:21668246-21668265 | Msa0320830:intron | 30.0% | |
AAAAGTTCCTACAACATGTT+TGG | - | chr2_4:21668288-21668307 | None:intergenic | 30.0% | |
!! | TTGTAGGAACTTTTTCCATA+GGG | + | chr2_4:21668294-21668313 | Msa0320830:intron | 30.0% |
! | AACATTCTTTTTCCCACTTT+GGG | - | chr2_4:21668481-21668500 | None:intergenic | 30.0% |
! | TAACATTCTTTTTCCCACTT+TGG | - | chr2_4:21668482-21668501 | None:intergenic | 30.0% |
TCTTTCTCTGTGTTATCATT+AGG | - | chr2_4:21668632-21668651 | None:intergenic | 30.0% | |
TAATTATGTTGGAGTACATG+AGG | + | chr2_4:21668658-21668677 | Msa0320830:CDS | 30.0% | |
ACATGAGGAAGAAGATAATA+AGG | + | chr2_4:21668673-21668692 | Msa0320830:CDS | 30.0% | |
GATAACACAAAGAAAGACAA+AGG | + | chr2_4:21668722-21668741 | Msa0320830:CDS | 30.0% | |
!! | AAAGACAAAGGTGTTTACAT+TGG | + | chr2_4:21668734-21668753 | Msa0320830:CDS | 30.0% |
TAAGGAAAATGCTATGTCTT+AGG | - | chr2_4:21668996-21669015 | None:intergenic | 30.0% | |
! | GCATTTTCCTTATGAAAACA+AGG | + | chr2_4:21669004-21669023 | Msa0320830:intron | 30.0% |
! | TTTTCCTTATGAAAACAAGG+GGG | + | chr2_4:21669007-21669026 | Msa0320830:intron | 30.0% |
AGTAAAAAGCTCATCAAAGA+AGG | - | chr2_4:21669094-21669113 | None:intergenic | 30.0% | |
!! | ATTTTGATGTTCACTGAGAA+TGG | + | chr2_4:21669156-21669175 | Msa0320830:intron | 30.0% |
CTAAATGAAGCCGATAAAAA+TGG | - | chr2_4:21669187-21669206 | None:intergenic | 30.0% | |
!! | TTATCGGCTTCATTTAGTAT+AGG | + | chr2_4:21669190-21669209 | Msa0320830:intron | 30.0% |
!! | TATCGGCTTCATTTAGTATA+GGG | + | chr2_4:21669191-21669210 | Msa0320830:intron | 30.0% |
TGCATTACATTAACTAGGTA+TGG | - | chr2_4:21669240-21669259 | None:intergenic | 30.0% | |
TCAAGTTACATGCATATAAC+AGG | - | chr2_4:21669354-21669373 | None:intergenic | 30.0% | |
!! | AATTTGACTTTAAGAGCATC+AGG | + | chr2_4:21669444-21669463 | Msa0320830:intron | 30.0% |
AGTTTAAATGTACTCCTACT+AGG | + | chr2_4:21669609-21669628 | Msa0320830:intron | 30.0% | |
CTTGTATTGGAACTCAAATA+TGG | - | chr2_4:21669761-21669780 | None:intergenic | 30.0% | |
! | CATATTTGAGTTCCAATACA+AGG | + | chr2_4:21669759-21669778 | Msa0320830:CDS | 30.0% |
!! | GCTTGTTTGGTCTTAAATAT+TGG | + | chr2_4:21669806-21669825 | Msa0320830:intron | 30.0% |
! | ATAGGTTGAATGTTTCAACA+TGG | + | chr2_4:21669888-21669907 | Msa0320830:intron | 30.0% |
! | TAGGTTGAATGTTTCAACAT+GGG | + | chr2_4:21669889-21669908 | Msa0320830:intron | 30.0% |
CTCTTATAGTTTATGGTTTC+AGG | + | chr2_4:21669966-21669985 | Msa0320830:intron | 30.0% | |
!!! | ATCATTTTGGTTTGGTAAAG+AGG | - | chr2_4:21670076-21670095 | None:intergenic | 30.0% |
!!! | GCCATTTTATCATTTTGGTT+TGG | - | chr2_4:21670084-21670103 | None:intergenic | 30.0% |
!!! | ATTAGGACATTTTTTGGCAT+GGG | + | chr2_4:21670106-21670125 | Msa0320830:intron | 30.0% |
GAACTTATATGTCTGAATCA+TGG | + | chr2_4:21670244-21670263 | Msa0320830:CDS | 30.0% | |
!! | AATACTATCGACTTGGAAAA+AGG | + | chr2_4:21670545-21670564 | Msa0320830:CDS | 30.0% |
AATTGGAAGTCTTAAAACAG+TGG | + | chr2_4:21670643-21670662 | Msa0320830:CDS | 30.0% | |
ATTGGAAGTCTTAAAACAGT+GGG | + | chr2_4:21670644-21670663 | Msa0320830:CDS | 30.0% | |
!!! | AACAAGAGTATCCTTTTCTT+AGG | + | chr2_4:21670672-21670691 | Msa0320830:CDS | 30.0% |
! | GTCAATTCTCATTTTAGATG+AGG | + | chr2_4:21670779-21670798 | Msa0320830:CDS | 30.0% |
ATATCAAAATCATGTCAAGG+AGG | + | chr2_4:21670890-21670909 | Msa0320830:CDS | 30.0% | |
!!! | CTACTTTCCTTTTAAAATCC+GGG | - | chr2_4:21671058-21671077 | None:intergenic | 30.0% |
!!! | GCTACTTTCCTTTTAAAATC+CGG | - | chr2_4:21671059-21671078 | None:intergenic | 30.0% |
TAGCTGTTATACATGATTTG+CGG | + | chr2_4:21671075-21671094 | Msa0320830:CDS | 30.0% | |
! | TTAACTTCATGCTTTTGTCT+GGG | - | chr2_4:21671194-21671213 | None:intergenic | 30.0% |
TTCTATATCTGAGCATACAA+TGG | + | chr2_4:21671316-21671335 | Msa0320830:CDS | 30.0% | |
!! | TGCCTCTAAAATATTTGGAA+AGG | + | chr2_4:21671456-21671475 | Msa0320830:CDS | 30.0% |
! | ATTGTTGAATTTTTCCATGG+AGG | - | chr2_4:21671564-21671583 | None:intergenic | 30.0% |
! | GATTGACCCAAAAAAGATTT+TGG | - | chr2_4:21671597-21671616 | None:intergenic | 30.0% |
TTTCGAAAATGTGGTTTGAA+TGG | + | chr2_4:21671819-21671838 | Msa0320830:CDS | 30.0% | |
! | TTTCTAGAAAGTCCATTGTT+AGG | + | chr2_4:21671908-21671927 | Msa0320830:CDS | 30.0% |
! | TTCTAGAAAGTCCATTGTTA+GGG | + | chr2_4:21671909-21671928 | Msa0320830:CDS | 30.0% |
ATGTAAAAGCCCTGTATAAA+AGG | + | chr2_4:21671936-21671955 | Msa0320830:CDS | 30.0% | |
AGTTAAATCACCATTGTCCA+TGG | + | chr2_4:21666152-21666171 | Msa0320830:intron | 35.0% | |
ACAATTTCCTCACGAAAACA+TGG | - | chr2_4:21666209-21666228 | None:intergenic | 35.0% | |
! | GTTAGATGCTATAGAGCATT+TGG | + | chr2_4:21666352-21666371 | Msa0320830:intron | 35.0% |
! | GTTAGTCTCGAAATGAAATG+AGG | + | chr2_4:21666453-21666472 | Msa0320830:intron | 35.0% |
TAGTCTCGAAATGAAATGAG+GGG | + | chr2_4:21666455-21666474 | Msa0320830:intron | 35.0% | |
ACATCACCATGTGTTAAACA+TGG | - | chr2_4:21666680-21666699 | None:intergenic | 35.0% | |
GTTATAAATCGCTTAGAGAG+TGG | + | chr2_4:21666698-21666717 | Msa0320830:CDS | 35.0% | |
! | GCCCAATATTTGCATTTTCT+GGG | - | chr2_4:21666765-21666784 | None:intergenic | 35.0% |
! | CTAGGACATTTTGCAATGTA+AGG | - | chr2_4:21666788-21666807 | None:intergenic | 35.0% |
TGCTAATCAACTATTCAGAG+TGG | + | chr2_4:21666811-21666830 | Msa0320830:CDS | 35.0% | |
GTCATAGATTTGGATTTGGA+CGG | + | chr2_4:21666902-21666921 | Msa0320830:CDS | 35.0% | |
TCATAGATTTGGATTTGGAC+GGG | + | chr2_4:21666903-21666922 | Msa0320830:CDS | 35.0% | |
! | GTGACATTGTATCCTCTTTT+TGG | - | chr2_4:21666956-21666975 | None:intergenic | 35.0% |
!! | TATCATTGATTCAGATGAGG+AGG | + | chr2_4:21666988-21667007 | Msa0320830:CDS | 35.0% |
TCTTCATCATGATCATCTGT+TGG | - | chr2_4:21667043-21667062 | None:intergenic | 35.0% | |
GTTTAAAGGATTGCAAAAGC+AGG | - | chr2_4:21667435-21667454 | None:intergenic | 35.0% | |
AAGGATACAACCCAAATGAA+AGG | - | chr2_4:21667461-21667480 | None:intergenic | 35.0% | |
!! | ATTTGGGTTGTATCCTTCTT+GGG | + | chr2_4:21667464-21667483 | Msa0320830:intron | 35.0% |
AGTGAAACTTGACAGTAGAA+TGG | - | chr2_4:21667975-21667994 | None:intergenic | 35.0% | |
AGGAGTAAAGGAAAAAAGGA+AGG | - | chr2_4:21668198-21668217 | None:intergenic | 35.0% | |
GCTGAACGATGAACAATATA+TGG | + | chr2_4:21668244-21668263 | Msa0320830:intron | 35.0% | |
!! | GTTGTAGGAACTTTTTCCAT+AGG | + | chr2_4:21668293-21668312 | Msa0320830:intron | 35.0% |
ATGAGCATTAACAATCCCTA+TGG | - | chr2_4:21668312-21668331 | None:intergenic | 35.0% | |
GCTCATAAATCTAGATTCCT+TGG | + | chr2_4:21668326-21668345 | Msa0320830:intron | 35.0% | |
! | ACATTCTTTTTCCCACTTTG+GGG | - | chr2_4:21668480-21668499 | None:intergenic | 35.0% |
TCCGTGCAAAAATGCTTTAT+AGG | + | chr2_4:21668538-21668557 | Msa0320830:intron | 35.0% | |
!! | CCCTATAAAGCATTTTTGCA+CGG | - | chr2_4:21668542-21668561 | None:intergenic | 35.0% |
CCGTGCAAAAATGCTTTATA+GGG | + | chr2_4:21668539-21668558 | Msa0320830:intron | 35.0% | |
GATAACACAGAGAAAGACAA+AGG | + | chr2_4:21668635-21668654 | Msa0320830:intron | 35.0% | |
TGTTTACATTGGTGTACATG+AGG | + | chr2_4:21668745-21668764 | Msa0320830:CDS | 35.0% | |
AAGTTTGACACTGAAGATGA+TGG | + | chr2_4:21668779-21668798 | Msa0320830:CDS | 35.0% | |
AGTTTGACACTGAAGATGAT+GGG | + | chr2_4:21668780-21668799 | Msa0320830:CDS | 35.0% | |
!!! | ATTTCCCCCTTGTTTTCATA+AGG | - | chr2_4:21669014-21669033 | None:intergenic | 35.0% |
TTATGAAAACAAGGGGGAAA+TGG | + | chr2_4:21669013-21669032 | Msa0320830:intron | 35.0% | |
TATGAAAACAAGGGGGAAAT+GGG | + | chr2_4:21669014-21669033 | Msa0320830:intron | 35.0% | |
GAAAACTGGACTATTGTGTA+GGG | + | chr2_4:21669036-21669055 | Msa0320830:intron | 35.0% | |
AAAACTGGACTATTGTGTAG+GGG | + | chr2_4:21669037-21669056 | Msa0320830:intron | 35.0% | |
!! | AATGGCCTGTCCATTTTTAT+CGG | + | chr2_4:21669174-21669193 | Msa0320830:intron | 35.0% |
TCTCTGCATTAATGCTTGTT+TGG | + | chr2_4:21669793-21669812 | Msa0320830:intron | 35.0% | |
! | TACCTCTTTTGTGGGAAAAA+TGG | + | chr2_4:21669989-21670008 | Msa0320830:intron | 35.0% |
!!! | TGGCACATTAGGACATTTTT+TGG | + | chr2_4:21670100-21670119 | Msa0320830:intron | 35.0% |
!!! | CATTAGGACATTTTTTGGCA+TGG | + | chr2_4:21670105-21670124 | Msa0320830:intron | 35.0% |
GAAAATTGAATCCTTCGACT+TGG | - | chr2_4:21670377-21670396 | None:intergenic | 35.0% | |
! | CAATTTTCTTGTCAGAAACC+TGG | + | chr2_4:21670389-21670408 | Msa0320830:CDS | 35.0% |
TGACAGTAGATCACAACAAT+TGG | + | chr2_4:21670626-21670645 | Msa0320830:CDS | 35.0% | |
ACTGTTGGTATCCTAAGAAA+AGG | - | chr2_4:21670686-21670705 | None:intergenic | 35.0% | |
!! | AGATAATGGACGAAAACTGT+TGG | - | chr2_4:21670701-21670720 | None:intergenic | 35.0% |
TAGGAACGAGAATACTGATA+CGG | + | chr2_4:21670812-21670831 | Msa0320830:CDS | 35.0% | |
!! | CCAAGAAAAGTTGTTTTGTC+CGG | + | chr2_4:21670861-21670880 | Msa0320830:CDS | 35.0% |
!! | CAAGAAAAGTTGTTTTGTCC+GGG | + | chr2_4:21670862-21670881 | Msa0320830:CDS | 35.0% |
CCATCTTTATAAACTTTGGG+CGG | - | chr2_4:21670938-21670957 | None:intergenic | 35.0% | |
TGTGAAAGACTTCTGTGATT+TGG | + | chr2_4:21671010-21671029 | Msa0320830:CDS | 35.0% | |
! | AGCTGTTATACATGATTTGC+GGG | + | chr2_4:21671076-21671095 | Msa0320830:CDS | 35.0% |
!! | AAGGTACTGCACTACTATAA+AGG | + | chr2_4:21671110-21671129 | Msa0320830:CDS | 35.0% |
! | CTTAACTTCATGCTTTTGTC+TGG | - | chr2_4:21671195-21671214 | None:intergenic | 35.0% |
AAGTTCAAGATGTCTTCTGT+AGG | + | chr2_4:21671236-21671255 | Msa0320830:CDS | 35.0% | |
TCACTACATTTCTCTGCAAT+TGG | - | chr2_4:21671293-21671312 | None:intergenic | 35.0% | |
! | TGGAAAGGTTAGCTATGAAA+TGG | + | chr2_4:21671471-21671490 | Msa0320830:CDS | 35.0% |
! | AAGGTTAGCTATGAAATGGA+AGG | + | chr2_4:21671475-21671494 | Msa0320830:CDS | 35.0% |
! | AGGTTAGCTATGAAATGGAA+GGG | + | chr2_4:21671476-21671495 | Msa0320830:CDS | 35.0% |
AAAATTCAACAATTCACCCG+AGG | + | chr2_4:21671571-21671590 | Msa0320830:CDS | 35.0% | |
! | ACACAAACACTTTCCTTTTC+TGG | - | chr2_4:21671733-21671752 | None:intergenic | 35.0% |
TCTAGAAAGTCCATTGTTAG+GGG | + | chr2_4:21671910-21671929 | Msa0320830:CDS | 35.0% | |
TTTACATCTTCCCCTAACAA+TGG | - | chr2_4:21671923-21671942 | None:intergenic | 35.0% | |
! | GTGGTCTAACCTTTTATACA+GGG | - | chr2_4:21671948-21671967 | None:intergenic | 35.0% |
! | AGTGGTCTAACCTTTTATAC+AGG | - | chr2_4:21671949-21671968 | None:intergenic | 35.0% |
! | ATGTAATACCGGTTGAAGCA+GGG | - | chr2_4:21665945-21665964 | None:intergenic | 40.0% |
! | AATGTAATACCGGTTGAAGC+AGG | - | chr2_4:21665946-21665965 | None:intergenic | 40.0% |
GGACAATGGTGATTTAACTC+AGG | - | chr2_4:21666151-21666170 | None:intergenic | 40.0% | |
! | GATTTGTCCATGTTTTCGTG+AGG | + | chr2_4:21666199-21666218 | Msa0320830:intron | 40.0% |
! | ATCAAACCTTTCTAGTAGGG+TGG | + | chr2_4:21666320-21666339 | Msa0320830:intron | 40.0% |
ATTTGGTTATGCAGCCATGT+CGG | + | chr2_4:21666369-21666388 | Msa0320830:intron | 40.0% | |
!!! | AGTTTTTTGCGTCCTTCTTC+AGG | - | chr2_4:21666635-21666654 | None:intergenic | 40.0% |
AGCTTGCCATGTTTAACACA+TGG | + | chr2_4:21666671-21666690 | Msa0320830:CDS | 40.0% | |
CGCTTAGAGAGTGGAAAATT+TGG | + | chr2_4:21666707-21666726 | Msa0320830:CDS | 40.0% | |
! | GGCCCAATATTTGCATTTTC+TGG | - | chr2_4:21666766-21666785 | None:intergenic | 40.0% |
TCAACTATTCAGAGTGGTGA+CGG | + | chr2_4:21666817-21666836 | Msa0320830:CDS | 40.0% | |
TGATGAAGAAACTCCCAACA+TGG | + | chr2_4:21666844-21666863 | Msa0320830:CDS | 40.0% | |
CATAGATTTGGATTTGGACG+GGG | + | chr2_4:21666904-21666923 | Msa0320830:CDS | 40.0% | |
!! | TGGTGCCAAAACATCCTTTT+CGG | - | chr2_4:21666936-21666955 | None:intergenic | 40.0% |
!!! | GATGTTTTGGCACCAAAAAG+AGG | + | chr2_4:21666941-21666960 | Msa0320830:CDS | 40.0% |
TTCAGATGAGGAGGATGATA+AGG | + | chr2_4:21666997-21667016 | Msa0320830:CDS | 40.0% | |
GAAAGTGAAAAAGCTACTGC+TGG | + | chr2_4:21667076-21667095 | Msa0320830:CDS | 40.0% | |
ATGACTTCATGAAATGGTGC+TGG | - | chr2_4:21667199-21667218 | None:intergenic | 40.0% | |
!! | CATTATCATCGATTCAGACG+AGG | + | chr2_4:21667216-21667235 | Msa0320830:CDS | 40.0% |
ATTCAGACGAGGAAGATGAT+AGG | + | chr2_4:21667227-21667246 | Msa0320830:CDS | 40.0% | |
TTCAGACGAGGAAGATGATA+GGG | + | chr2_4:21667228-21667247 | Msa0320830:CDS | 40.0% | |
TGATGAAGAAACTCCCAACA+TGG | + | chr2_4:21666844-21666863 | Msa0320830:CDS | 40.0% | |
GGCAATGCAACTTCATGAAA+TGG | - | chr2_4:21667367-21667386 | None:intergenic | 40.0% | |
!! | CATTTGGGTTGTATCCTTCT+TGG | + | chr2_4:21667463-21667482 | Msa0320830:intron | 40.0% |
CTAGAATCTTCCGTCACAAA+TGG | - | chr2_4:21667522-21667541 | None:intergenic | 40.0% | |
! | TAAAGTGGAATCTTCTGGAG+AGG | + | chr2_4:21667644-21667663 | Msa0320830:intron | 40.0% |
!! | TTTTCTGGTACCTTGTTGCT+TGG | + | chr2_4:21668074-21668093 | Msa0320830:intron | 40.0% |
TGCATAACTACCAAGCAACA+AGG | - | chr2_4:21668087-21668106 | None:intergenic | 40.0% | |
!! | ATGATGGGCTAGAAGATGTT+TGG | + | chr2_4:21668795-21668814 | Msa0320830:CDS | 40.0% |
AAAACAGGTCACAAACGAGT+GGG | - | chr2_4:21668921-21668940 | None:intergenic | 40.0% | |
AAAAACAGGTCACAAACGAG+TGG | - | chr2_4:21668922-21668941 | None:intergenic | 40.0% | |
GGAAAACTGGACTATTGTGT+AGG | + | chr2_4:21669035-21669054 | Msa0320830:intron | 40.0% | |
TGAAGCCGATAAAAATGGAC+AGG | - | chr2_4:21669182-21669201 | None:intergenic | 40.0% | |
GGGTATATGTGTGTATATGC+TGG | + | chr2_4:21669211-21669230 | Msa0320830:intron | 40.0% | |
GGCATAACAACGAGAAAGAA+AGG | - | chr2_4:21669333-21669352 | None:intergenic | 40.0% | |
ATCTGCAGAAACATCCTAGT+AGG | - | chr2_4:21669626-21669645 | None:intergenic | 40.0% | |
!! | AGCGTCATTTTCCTCTTCTT+CGG | - | chr2_4:21669656-21669675 | None:intergenic | 40.0% |
GTTATGTTTGTCGCGTTTGT+GGG | + | chr2_4:21669713-21669732 | Msa0320830:CDS | 40.0% | |
TTATGTTTGTCGCGTTTGTG+GGG | + | chr2_4:21669714-21669733 | Msa0320830:CDS | 40.0% | |
TCCAATACAAGGTTAGACAC+TGG | + | chr2_4:21669770-21669789 | Msa0320830:intron | 40.0% | |
ACCAGTGTCTAACCTTGTAT+TGG | - | chr2_4:21669774-21669793 | None:intergenic | 40.0% | |
!! | GTTTCAGGTACCTCTTTTGT+GGG | + | chr2_4:21669981-21670000 | Msa0320830:intron | 40.0% |
!! | CACCATTTTTCCCACAAAAG+AGG | - | chr2_4:21669994-21670013 | None:intergenic | 40.0% |
TTCATTTGCTTTGCATGTCG+AGG | - | chr2_4:21670348-21670367 | None:intergenic | 40.0% | |
! | TTTTCTTGTCAGAAACCTGG+TGG | + | chr2_4:21670392-21670411 | Msa0320830:CDS | 40.0% |
TTTCTTGTCAGAAACCTGGT+GGG | + | chr2_4:21670393-21670412 | Msa0320830:CDS | 40.0% | |
ATGAATGTCTTTCCAGATCC+TGG | - | chr2_4:21670453-21670472 | None:intergenic | 40.0% | |
AGGATCTGGAAAGACATTCA+TGG | + | chr2_4:21670452-21670471 | Msa0320830:CDS | 40.0% | |
CAAGTCGATAGTATTCCCTT+AGG | - | chr2_4:21670540-21670559 | None:intergenic | 40.0% | |
! | CTAAGGGAATACTATCGACT+TGG | + | chr2_4:21670538-21670557 | Msa0320830:CDS | 40.0% |
GGAAAAAGGAGTTTCTGACA+TGG | + | chr2_4:21670559-21670578 | Msa0320830:CDS | 40.0% | |
GTATCAGTATTCTCGTTCCT+AGG | - | chr2_4:21670813-21670832 | None:intergenic | 40.0% | |
! | TGGTGTTTGTACTTTTGCGA+GGG | - | chr2_4:21670844-21670863 | None:intergenic | 40.0% |
!! | TTGGTGTTTGTACTTTTGCG+AGG | - | chr2_4:21670845-21670864 | None:intergenic | 40.0% |
! | CCGGACAAAACAACTTTTCT+TGG | - | chr2_4:21670864-21670883 | None:intergenic | 40.0% |
TTATAAACTTTGGGCGGACA+AGG | - | chr2_4:21670932-21670951 | None:intergenic | 40.0% | |
CCGCCCAAAGTTTATAAAGA+TGG | + | chr2_4:21670935-21670954 | Msa0320830:CDS | 40.0% | |
AACCTATTGTCCAACGCATT+AGG | + | chr2_4:21670967-21670986 | Msa0320830:CDS | 40.0% | |
AGTCTTTCACACCAGGTAAA+TGG | - | chr2_4:21671001-21671020 | None:intergenic | 40.0% | |
GGTTGAAAACACTTTGCAGA+AGG | + | chr2_4:21671031-21671050 | Msa0320830:CDS | 40.0% | |
! | AGAAGGACCCGGATTTTAAA+AGG | + | chr2_4:21671048-21671067 | Msa0320830:CDS | 40.0% |
! | GATTTTCTTGATGAGCTTCC+TGG | + | chr2_4:21671134-21671153 | Msa0320830:CDS | 40.0% |
ACAGTAAAATCAACTAGGCC+AGG | - | chr2_4:21671155-21671174 | None:intergenic | 40.0% | |
!! | TGGCCTAGTTGATTTTACTG+TGG | + | chr2_4:21671154-21671173 | Msa0320830:CDS | 40.0% |
GCACCACAGTAAAATCAACT+AGG | - | chr2_4:21671160-21671179 | None:intergenic | 40.0% | |
! | CTGCAATTGGTTTCAAGTCT+GGG | - | chr2_4:21671280-21671299 | None:intergenic | 40.0% |
! | TCTGCAATTGGTTTCAAGTC+TGG | - | chr2_4:21671281-21671300 | None:intergenic | 40.0% |
AGAATCGTCCACTGAACAAA+GGG | + | chr2_4:21671535-21671554 | Msa0320830:CDS | 40.0% | |
!! | CCAAAAAAGATTTTGGCCTC+GGG | - | chr2_4:21671590-21671609 | None:intergenic | 40.0% |
!! | CCCAAAAAAGATTTTGGCCT+CGG | - | chr2_4:21671591-21671610 | None:intergenic | 40.0% |
!!! | CCGAGGCCAAAATCTTTTTT+GGG | + | chr2_4:21671588-21671607 | Msa0320830:CDS | 40.0% |
TTTGGGTCAATCAAAGCATG+TGG | + | chr2_4:21671605-21671624 | Msa0320830:CDS | 40.0% | |
TCAATCAAAGCATGTGGTGA+GGG | + | chr2_4:21671611-21671630 | Msa0320830:CDS | 40.0% | |
! | ATGTGGTGAGGGTATATCAT+TGG | + | chr2_4:21671622-21671641 | Msa0320830:CDS | 40.0% |
! | GTGAGGGTATATCATTGGTT+GGG | + | chr2_4:21671627-21671646 | Msa0320830:CDS | 40.0% |
! | TGAGGGTATATCATTGGTTG+GGG | + | chr2_4:21671628-21671647 | Msa0320830:CDS | 40.0% |
ATAGCTTGACGAGTAACAGA+CGG | - | chr2_4:21671689-21671708 | None:intergenic | 40.0% | |
TCTGTTACTCGTCAAGCTAT+TGG | + | chr2_4:21671689-21671708 | Msa0320830:CDS | 40.0% | |
! | AGTTGAGACAGTTGATGTGA+AGG | + | chr2_4:21671871-21671890 | Msa0320830:CDS | 40.0% |
! | ACAGTTGATGTGAAGGAATG+TGG | + | chr2_4:21671878-21671897 | Msa0320830:CDS | 40.0% |
TTCAGACCACCCTACTAGAA+AGG | - | chr2_4:21666329-21666348 | None:intergenic | 45.0% | |
TCAGGAATTTCGCCTGAAGA+AGG | + | chr2_4:21666620-21666639 | Msa0320830:intron | 45.0% | |
! | GCACACCGAAAAGGATGTTT+TGG | + | chr2_4:21666928-21666947 | Msa0320830:CDS | 45.0% |
GAGGAGGATGATAAGGATCA+TGG | + | chr2_4:21667004-21667023 | Msa0320830:CDS | 45.0% | |
! | ACTTCATGAAATGGTGCTGG+AGG | - | chr2_4:21667196-21667215 | None:intergenic | 45.0% |
TCTAATGCAGGAGACTGAAC+TGG | - | chr2_4:21667394-21667413 | None:intergenic | 45.0% | |
TCGGTCAAATCATCCCAAGA+AGG | - | chr2_4:21667480-21667499 | None:intergenic | 45.0% | |
GTTGGGACACTTGAGACAAA+AGG | - | chr2_4:21668012-21668031 | None:intergenic | 45.0% | |
TTGTCTCAAGTGTCCCAACT+TGG | + | chr2_4:21668013-21668032 | Msa0320830:intron | 45.0% | |
CCTTTACTCCTATGAGGCTA+CGG | + | chr2_4:21668207-21668226 | Msa0320830:intron | 45.0% | |
TATCTAGCCAACCCCAAAGT+GGG | + | chr2_4:21668466-21668485 | Msa0320830:intron | 45.0% | |
!!! | TCTTTTTCCCACTTTGGGGT+TGG | - | chr2_4:21668476-21668495 | None:intergenic | 45.0% |
CATGATCCCAATGCTTACCA+TGG | + | chr2_4:21668566-21668585 | Msa0320830:CDS | 45.0% | |
TCTCCTCCATGGTAAGCATT+GGG | - | chr2_4:21668575-21668594 | None:intergenic | 45.0% | |
TTCTCCTCCATGGTAAGCAT+TGG | - | chr2_4:21668576-21668595 | None:intergenic | 45.0% | |
!! | ATGGGCTAGAAGATGTTTGG+AGG | + | chr2_4:21668798-21668817 | Msa0320830:CDS | 45.0% |
! | TGGGCTAGAAGATGTTTGGA+GGG | + | chr2_4:21668799-21668818 | Msa0320830:CDS | 45.0% |
AGAAGATGTTTGGAGGGAGA+TGG | + | chr2_4:21668805-21668824 | Msa0320830:CDS | 45.0% | |
AAACAGGTCACAAACGAGTG+GGG | - | chr2_4:21668920-21668939 | None:intergenic | 45.0% | |
! | TCATTTTCCTCTTCTTCGGG+TGG | - | chr2_4:21669652-21669671 | None:intergenic | 45.0% |
!! | GCGTCATTTTCCTCTTCTTC+GGG | - | chr2_4:21669655-21669674 | None:intergenic | 45.0% |
GGTTATGTTTGTCGCGTTTG+TGG | + | chr2_4:21669712-21669731 | Msa0320830:CDS | 45.0% | |
GTTTGTGGGGTTATTGACAG+AGG | + | chr2_4:21669727-21669746 | Msa0320830:CDS | 45.0% | |
!! | GGTTTCAGGTACCTCTTTTG+TGG | + | chr2_4:21669980-21669999 | Msa0320830:intron | 45.0% |
!! | TTGAATCCTTCGACTTGGTG+CGG | - | chr2_4:21670372-21670391 | None:intergenic | 45.0% |
GGAAGTCTTAAAACAGTGGG+TGG | + | chr2_4:21670647-21670666 | Msa0320830:CDS | 45.0% | |
CTCCTAATGCGTTGGACAAT+AGG | - | chr2_4:21670972-21670991 | None:intergenic | 45.0% | |
TTGTCCAACGCATTAGGAGT+AGG | + | chr2_4:21670973-21670992 | Msa0320830:CDS | 45.0% | |
AGGAGTAGGATCCATTTACC+TGG | + | chr2_4:21670987-21671006 | Msa0320830:CDS | 45.0% | |
TCACAGAAGTCTTTCACACC+AGG | - | chr2_4:21671008-21671027 | None:intergenic | 45.0% | |
AAACACTTTGCAGAAGGACC+CGG | + | chr2_4:21671037-21671056 | Msa0320830:CDS | 45.0% | |
ATAGTAGTGCAGTACCTTGC+TGG | - | chr2_4:21671108-21671127 | None:intergenic | 45.0% | |
CTGAATCTATGCCAATCAGC+TGG | + | chr2_4:21671401-21671420 | Msa0320830:CDS | 45.0% | |
AAAGCTTCTCACCAGCTGAT+TGG | - | chr2_4:21671415-21671434 | None:intergenic | 45.0% | |
! | ATCAGCTGGTGAGAAGCTTT+TGG | + | chr2_4:21671415-21671434 | Msa0320830:CDS | 45.0% |
TAGCTATGAAATGGAAGGGC+TGG | + | chr2_4:21671480-21671499 | Msa0320830:CDS | 45.0% | |
GAGAATCGTCCACTGAACAA+AGG | + | chr2_4:21671534-21671553 | Msa0320830:CDS | 45.0% | |
!!! | CCCGAGGCCAAAATCTTTTT+TGG | + | chr2_4:21671587-21671606 | Msa0320830:CDS | 45.0% |
GTCAATCAAAGCATGTGGTG+AGG | + | chr2_4:21671610-21671629 | Msa0320830:CDS | 45.0% | |
! | GGTGAGGGTATATCATTGGT+TGG | + | chr2_4:21671626-21671645 | Msa0320830:CDS | 45.0% |
TAGCTTGACGAGTAACAGAC+GGG | - | chr2_4:21671688-21671707 | None:intergenic | 45.0% | |
!! | AACACTTTCCTTTTCTGGCC+TGG | - | chr2_4:21671728-21671747 | None:intergenic | 45.0% |
! | CCTTCTTGACACAAGTACTG+TGG | - | chr2_4:21671793-21671812 | None:intergenic | 45.0% |
CCACAGTACTTGTGTCAAGA+AGG | + | chr2_4:21671790-21671809 | Msa0320830:CDS | 45.0% | |
!! | TAAAAAAAATAACAAAATTA+AGG | - | chr2_4:21667586-21667605 | None:intergenic | 5.0% |
AGTAAACGCCCTGCTTCAAC+CGG | + | chr2_4:21665934-21665953 | Msa0320830:CDS | 50.0% | |
!! | GCAGGAGACTGAACTGGTTT+TGG | - | chr2_4:21667388-21667407 | None:intergenic | 50.0% |
! | GGAATCTTCTGGAGAGGAAG+AGG | + | chr2_4:21667650-21667669 | Msa0320830:intron | 50.0% |
CCGTAGCCTCATAGGAGTAA+AGG | - | chr2_4:21668210-21668229 | None:intergenic | 50.0% | |
CTATCTAGCCAACCCCAAAG+TGG | + | chr2_4:21668465-21668484 | Msa0320830:intron | 50.0% | |
GATCCCAATGCTTACCATGG+AGG | + | chr2_4:21668569-21668588 | Msa0320830:CDS | 50.0% | |
GATCTGCATGTTCTCCTCCA+TGG | - | chr2_4:21668586-21668605 | None:intergenic | 50.0% | |
TGTTTGGAGGGAGATGGCAA+TGG | + | chr2_4:21668811-21668830 | Msa0320830:CDS | 50.0% | |
AACAGGTCACAAACGAGTGG+GGG | - | chr2_4:21668919-21668938 | None:intergenic | 50.0% | |
CAAGGGGGAAATGGGAAAAC+TGG | + | chr2_4:21669022-21669041 | Msa0320830:intron | 50.0% | |
TCTGCATGCACGCTGTTCTT+TGG | + | chr2_4:21669504-21669523 | Msa0320830:intron | 50.0% | |
AGATCATCCACCCGAAGAAG+AGG | + | chr2_4:21669642-21669661 | Msa0320830:CDS | 50.0% | |
ATGAAACCGCACCAAGTCGA+AGG | + | chr2_4:21670363-21670382 | Msa0320830:CDS | 50.0% | |
GGAGTTTCTGACATGGCAAG+TGG | + | chr2_4:21670566-21670585 | Msa0320830:CDS | 50.0% | |
TAGATGAGGGACACACTCCT+AGG | + | chr2_4:21670793-21670812 | Msa0320830:CDS | 50.0% | |
GGATCCTACTCCTAATGCGT+TGG | - | chr2_4:21670980-21670999 | None:intergenic | 50.0% | |
! | TTGGTTTCAAGTCTGGGTGC+AGG | - | chr2_4:21671274-21671293 | None:intergenic | 50.0% |
GCGAACCAAGATGTGAGAGA+CGG | + | chr2_4:21671350-21671369 | Msa0320830:CDS | 50.0% | |
CGAACCAAGATGTGAGAGAC+GGG | + | chr2_4:21671351-21671370 | Msa0320830:CDS | 50.0% | |
GAACCAAGATGTGAGAGACG+GGG | + | chr2_4:21671352-21671371 | Msa0320830:CDS | 50.0% | |
AAATGGAAGGGCTGGAGTCT+TGG | + | chr2_4:21671488-21671507 | Msa0320830:CDS | 50.0% | |
TGAACAAAGGGAGTCCTCCA+TGG | + | chr2_4:21671547-21671566 | Msa0320830:CDS | 50.0% | |
!! | CTTTCCTTTTCTGGCCTGGT+CGG | - | chr2_4:21671724-21671743 | None:intergenic | 50.0% |
!! | AGCTGCTGATTCTCCAGAAG+AGG | + | chr2_4:21671763-21671782 | Msa0320830:CDS | 50.0% |
GTACTGTGGTCTTCCTCTTC+TGG | - | chr2_4:21671779-21671798 | None:intergenic | 50.0% | |
! | TGAAGCAGGGCGTTTACTGG+AGG | - | chr2_4:21665932-21665951 | None:intergenic | 55.0% |
! | GGTTGAAGCAGGGCGTTTAC+TGG | - | chr2_4:21665935-21665954 | None:intergenic | 55.0% |
!! | ATGCAGCCATGTCGGTTTGC+TGG | + | chr2_4:21666377-21666396 | Msa0320830:intron | 55.0% |
!! | AGCCATGTCGGTTTGCTGGT+TGG | + | chr2_4:21666381-21666400 | Msa0320830:intron | 55.0% |
CTCCAACCAGCAAACCGACA+TGG | - | chr2_4:21666386-21666405 | None:intergenic | 55.0% | |
!! | CATGTCGGTTTGCTGGTTGG+AGG | + | chr2_4:21666384-21666403 | Msa0320830:intron | 55.0% |
GATGTGAGCCGTAGCCTCAT+AGG | - | chr2_4:21668218-21668237 | None:intergenic | 55.0% | |
GAGGGAGATGGCAATGGCAA+TGG | + | chr2_4:21668817-21668836 | Msa0320830:CDS | 55.0% | |
ACAGGTCACAAACGAGTGGG+GGG | - | chr2_4:21668918-21668937 | None:intergenic | 55.0% | |
!! | TGCATTCTGGCTCATGCTCC+AGG | + | chr2_4:21670432-21670451 | Msa0320830:CDS | 55.0% |
ACCTCTCGTGGTGCTTCCTA+AGG | + | chr2_4:21670521-21670540 | Msa0320830:CDS | 55.0% | |
CCTCTCGTGGTGCTTCCTAA+GGG | + | chr2_4:21670522-21670541 | Msa0320830:CDS | 55.0% | |
TTTGCGGGAGATGACCAGCA+AGG | + | chr2_4:21671091-21671110 | Msa0320830:CDS | 55.0% | |
TCACCCCGTCTCTCACATCT+TGG | - | chr2_4:21671358-21671377 | None:intergenic | 55.0% | |
GGAGGACTCCCTTTGTTCAG+TGG | - | chr2_4:21671546-21671565 | None:intergenic | 55.0% | |
!! | GACGAGTAACAGACGGGTTG+AGG | - | chr2_4:21671682-21671701 | None:intergenic | 55.0% |
CTTTCCGACCAGGCCAGAAA+AGG | + | chr2_4:21671717-21671736 | Msa0320830:CDS | 55.0% | |
!! | GTCGGTTTGCTGGTTGGAGG+TGG | + | chr2_4:21666387-21666406 | Msa0320830:intron | 60.0% |
!! | GGTTTGCTGGTTGGAGGTGG+TGG | + | chr2_4:21666390-21666409 | Msa0320830:intron | 60.0% |
! | TTGCTGGTTGGAGGTGGTGG+TGG | + | chr2_4:21666393-21666412 | Msa0320830:intron | 60.0% |
CAGGTCACAAACGAGTGGGG+GGG | - | chr2_4:21668917-21668936 | None:intergenic | 60.0% | |
AACCTGGTGGGAGACCATCC+TGG | + | chr2_4:21670405-21670424 | Msa0320830:CDS | 60.0% | |
ACCTGGTGGGAGACCATCCT+GGG | + | chr2_4:21670406-21670425 | Msa0320830:CDS | 60.0% | |
CCAGAATGCATCCCCCAGGA+TGG | - | chr2_4:21670422-21670441 | None:intergenic | 60.0% | |
CCATCCTGGGGGATGCATTC+TGG | + | chr2_4:21670419-21670438 | Msa0320830:CDS | 60.0% | |
TGAGCCAGAATGCATCCCCC+AGG | - | chr2_4:21670426-21670445 | None:intergenic | 60.0% | |
CTGGCTCATGCTCCAGGATC+TGG | + | chr2_4:21670438-21670457 | Msa0320830:CDS | 60.0% | |
ACCACGAGAGGTCGTGCATC+GGG | - | chr2_4:21670513-21670532 | None:intergenic | 60.0% | |
CACCACGAGAGGTCGTGCAT+CGG | - | chr2_4:21670514-21670533 | None:intergenic | 60.0% | |
!! | CCCTTAGGAAGCACCACGAG+AGG | - | chr2_4:21670525-21670544 | None:intergenic | 60.0% |
ATTGGCCGTGCTTTCCGACC+AGG | + | chr2_4:21671707-21671726 | Msa0320830:CDS | 60.0% | |
TCTGGCCTGGTCGGAAAGCA+CGG | - | chr2_4:21671715-21671734 | None:intergenic | 60.0% | |
! | GGACGGGGAGCACACCGAAA+AGG | + | chr2_4:21666919-21666938 | Msa0320830:CDS | 65.0% |
CCTGGTGGGAGACCATCCTG+GGG | + | chr2_4:21670407-21670426 | Msa0320830:CDS | 65.0% | |
CTGGTGGGAGACCATCCTGG+GGG | + | chr2_4:21670408-21670427 | Msa0320830:CDS | 65.0% | |
TCCCGATGCACGACCTCTCG+TGG | + | chr2_4:21670509-21670528 | Msa0320830:CDS | 65.0% | |
CCCCAGGATGGTCTCCCACC+AGG | - | chr2_4:21670410-21670429 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 21665922 | 21671994 | 21665922 | ID=Msa0320830;Name=Msa0320830 |
chr2_4 | mRNA | 21665922 | 21671994 | 21665922 | ID=Msa0320830-mRNA-1;Parent=Msa0320830;Name=Msa0320830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.2|0|0.83|0.8|0.66|6|0|1000 |
chr2_4 | exon | 21665922 | 21665955 | 21665922 | ID=Msa0320830-mRNA-1:exon:7953;Parent=Msa0320830-mRNA-1 |
chr2_4 | exon | 21666624 | 21667420 | 21666624 | ID=Msa0320830-mRNA-1:exon:7954;Parent=Msa0320830-mRNA-1 |
chr2_4 | exon | 21668560 | 21668620 | 21668560 | ID=Msa0320830-mRNA-1:exon:7955;Parent=Msa0320830-mRNA-1 |
chr2_4 | exon | 21668657 | 21668850 | 21668657 | ID=Msa0320830-mRNA-1:exon:7956;Parent=Msa0320830-mRNA-1 |
chr2_4 | exon | 21669631 | 21669780 | 21669631 | ID=Msa0320830-mRNA-1:exon:7957;Parent=Msa0320830-mRNA-1 |
chr2_4 | exon | 21670228 | 21671994 | 21670228 | ID=Msa0320830-mRNA-1:exon:7958;Parent=Msa0320830-mRNA-1 |
chr2_4 | CDS | 21665922 | 21665955 | 21665922 | ID=Msa0320830-mRNA-1:cds;Parent=Msa0320830-mRNA-1 |
chr2_4 | CDS | 21666624 | 21667420 | 21666624 | ID=Msa0320830-mRNA-1:cds;Parent=Msa0320830-mRNA-1 |
chr2_4 | CDS | 21668560 | 21668620 | 21668560 | ID=Msa0320830-mRNA-1:cds;Parent=Msa0320830-mRNA-1 |
chr2_4 | CDS | 21668657 | 21668850 | 21668657 | ID=Msa0320830-mRNA-1:cds;Parent=Msa0320830-mRNA-1 |
chr2_4 | CDS | 21669631 | 21669780 | 21669631 | ID=Msa0320830-mRNA-1:cds;Parent=Msa0320830-mRNA-1 |
chr2_4 | CDS | 21670228 | 21671994 | 21670228 | ID=Msa0320830-mRNA-1:cds;Parent=Msa0320830-mRNA-1 |
Gene Sequence |
Protein sequence |