AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0202920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202920 MtrunA17_Chr2g0300301 99.515 206 1 0 207 412 147 352 2.44e-149 427
Msa0202920 MtrunA17_Chr2g0300301 99.315 146 0 1 1 145 1 146 1.62e-96 293
Msa0202920 MtrunA17_Chr8g0343511 70.388 206 58 2 207 412 167 369 1.46e-97 296
Msa0202920 MtrunA17_Chr8g0343511 54.335 173 44 7 1 145 1 166 1.17e-43 156
Msa0202920 MtrunA17_Chr8g0369441 45.755 212 69 8 207 412 162 333 1.14e-46 163
Msa0202920 MtrunA17_Chr8g0369441 43.452 168 65 6 1 145 1 161 1.12e-24 103
Msa0202920 MtrunA17_Chr8g0369441 37.037 81 50 1 331 411 107 186 8.26e-11 63.2
Msa0202920 MtrunA17_Chr5g0409431 32.840 338 108 9 91 412 20 254 3.53e-42 149
Msa0202920 MtrunA17_Chr5g0442001 40.833 120 68 2 292 411 966 1082 9.91e-20 92.0
Msa0202920 MtrunA17_Chr3g0094741 42.500 120 66 2 292 411 977 1093 1.79e-19 91.3
Msa0202920 MtrunA17_Chr6g0463421 49.231 65 33 0 347 411 1028 1092 2.17e-15 78.6
Msa0202920 MtrunA17_Chr8g0362061 50.000 58 29 0 350 407 945 1002 3.19e-13 71.6
Msa0202920 MtrunA17_Chr3g0109811 51.852 54 26 0 358 411 974 1027 9.79e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0202920 AT1G54180.1 47.285 442 131 14 1 412 1 370 1.76e-118 350
Msa0202920 AT5G20540.1 71.498 207 56 3 207 412 180 384 3.20e-92 283
Msa0202920 AT5G20540.1 51.381 181 50 5 1 145 1 179 1.05e-41 151
Msa0202920 AT5G20540.1 39.535 86 49 2 326 411 122 204 3.28e-11 65.1
Msa0202920 AT3G14000.2 60.190 211 70 5 207 412 173 374 9.98e-78 245
Msa0202920 AT3G14000.2 48.000 175 58 4 1 145 1 172 1.09e-36 138
Msa0202920 AT3G14000.1 60.190 211 70 5 207 412 173 374 9.98e-78 245
Msa0202920 AT3G14000.1 48.000 175 58 4 1 145 1 172 1.09e-36 138
Msa0202920 AT1G54180.2 55.610 205 60 4 208 412 171 344 6.72e-69 222
Msa0202920 AT1G54180.2 50.867 173 53 5 1 145 1 169 1.24e-41 150
Msa0202920 AT1G31880.1 47.115 208 76 5 207 412 169 344 8.52e-49 169
Msa0202920 AT1G31880.1 37.143 175 73 5 1 145 1 168 4.00e-20 91.3
Msa0202920 AT1G31880.2 47.115 208 76 5 207 412 183 358 1.16e-48 169
Msa0202920 AT1G31880.2 37.143 175 73 5 1 145 15 182 5.44e-20 91.3
Msa0202920 AT2G35600.2 46.860 207 67 7 207 412 167 331 1.50e-46 163
Msa0202920 AT2G35600.2 39.080 174 69 4 1 145 1 166 2.75e-19 88.6
Msa0202920 AT2G35600.1 46.860 207 67 7 207 412 167 331 1.50e-46 163
Msa0202920 AT2G35600.1 39.080 174 69 4 1 145 1 166 2.75e-19 88.6
Msa0202920 AT2G35600.3 46.860 207 67 7 207 412 167 331 1.50e-46 163
Msa0202920 AT2G35600.3 39.080 174 69 4 1 145 1 166 2.75e-19 88.6
Msa0202920 AT2G21030.1 39.873 158 61 5 208 363 33 158 2.04e-19 85.1
Msa0202920 AT5G12350.1 50.746 67 33 0 345 411 995 1061 1.79e-17 85.5
Msa0202920 AT5G19420.2 56.250 64 26 1 350 411 1056 1119 6.84e-17 83.6
Msa0202920 AT5G19420.1 56.250 64 26 1 350 411 1022 1085 6.90e-17 83.6
Msa0202920 AT1G65920.2 44.928 69 37 1 343 411 889 956 2.54e-12 69.3
Msa0202920 AT1G65920.1 44.928 69 37 1 343 411 935 1002 2.60e-12 69.3
Msa0202920 AT1G69710.1 38.793 116 64 3 298 407 918 1032 7.85e-12 67.8
Msa0202920 AT1G69710.2 44.444 81 39 2 333 407 939 1019 8.46e-12 67.8

Find 156 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTATACAAGTCCTAAA+AGG 0.218992 2_1:+25866398 Msa0202920:CDS
GAATCTTCTTCGAGTTTCTT+TGG 0.221800 2_1:-25863162 None:intergenic
CACTAATGGTTGAAACCTTT+GGG 0.227599 2_1:-25869840 None:intergenic
GGAGATGGAAGCTAGGTTAA+AGG 0.264445 2_1:+25863371 Msa0202920:CDS
TTGGTCAGTGGTGGTGTCAC+TGG 0.272405 2_1:-25869688 None:intergenic
ATCAAAGGATTTGCTGCTAA+TGG 0.285440 2_1:+25871100 Msa0202920:three_prime_UTR
CCGTTTCGGAGGCGGGTTGC+AGG 0.299010 2_1:-25863288 None:intergenic
GCACTAATGGTTGAAACCTT+TGG 0.308862 2_1:-25869841 None:intergenic
AGTGGTGGTGCTTGAGGAGG+AGG 0.311170 2_1:+25863458 Msa0202920:CDS
ACCTCGTCTTCCGATCTTGC+TGG 0.345526 2_1:-25869017 None:intergenic
CCGAGTTCGTCTTCGTCGTT+TGG 0.357632 2_1:+25863417 Msa0202920:CDS
ATCTCAAGCGGATACGGTTC+AGG 0.364829 2_1:+25863556 Msa0202920:CDS
GACATGGCATTGAAAGCTTC+AGG 0.368472 2_1:+25863237 Msa0202920:CDS
ATCTGTCTTAGCGGCACTAA+TGG 0.372394 2_1:-25869854 None:intergenic
AGTTTCGAAGGACGAGGACT+TGG 0.379782 2_1:+25863343 Msa0202920:CDS
TAAGTCATACTGATAATGTT+TGG 0.386791 2_1:-25869800 None:intergenic
GAGATGGAAGCTAGGTTAAA+GGG 0.387212 2_1:+25863372 Msa0202920:CDS
AGAAGTGTGAATGCTGGTTT+TGG 0.398547 2_1:-25866370 None:intergenic
GAGGAGAGTGGTGGTGCTTG+AGG 0.403386 2_1:+25863452 Msa0202920:CDS
GGAGGAGGGCAAGGAGTGGG+TGG 0.405266 2_1:+25863476 Msa0202920:CDS
TCGTCGTTTGGTGGAGGAAG+TGG 0.408131 2_1:+25863429 Msa0202920:CDS
CGCAATTTATTCCGACCAAC+AGG 0.409018 2_1:+25869724 Msa0202920:CDS
AGATCAGAAGAGTCAGGTTC+AGG 0.420068 2_1:+25870040 Msa0202920:CDS
TTCTTGAAACTTATGAGTAA+TGG 0.423645 2_1:+25871337 Msa0202920:three_prime_UTR
GGTCTATGCCAGGCGGCAAA+AGG 0.431422 2_1:+25870016 Msa0202920:CDS
TCTTCCGATCTTGCTGGAGT+TGG 0.435615 2_1:-25869011 None:intergenic
TCCTCAACCCATTCACTATC+CGG 0.441147 2_1:-25869964 None:intergenic
CGACCAACAGGAATGGGAAT+GGG 0.443580 2_1:+25869736 Msa0202920:CDS
CAAGGAGTGGGTGGCACAAG+TGG 0.447331 2_1:+25863485 Msa0202920:CDS
GGAGGAGGAGGGCAAGGAGT+GGG 0.449253 2_1:+25863473 Msa0202920:CDS
CGGAGCCACCGTTTCGGAGG+CGG 0.452225 2_1:-25863296 None:intergenic
GTCGCGATATATTTAACAAA+TGG 0.452492 2_1:+25868901 Msa0202920:intron
GGAGCCACCGTTTCGGAGGC+GGG 0.454816 2_1:-25863295 None:intergenic
TGGGTGGCACAAGTGGAGCC+TGG 0.455586 2_1:+25863492 Msa0202920:CDS
TTATTCCGACCAACAGGAAT+GGG 0.458576 2_1:+25869730 Msa0202920:CDS
TGGTCAGTGGTGGTGTCACT+GGG 0.468014 2_1:-25869687 None:intergenic
CTGACTCGGAGCCACCGTTT+CGG 0.468024 2_1:-25863302 None:intergenic
GAGTTGGAAGCGGGAAGGCT+TGG 0.477113 2_1:-25868995 None:intergenic
TTGGAAGCGGGAAGGCTTGG+CGG 0.478088 2_1:-25868992 None:intergenic
GTAACGATCTCAAGCGGATA+CGG 0.479163 2_1:+25863550 Msa0202920:CDS
GAGAGTGGTGGTGCTTGAGG+AGG 0.480195 2_1:+25863455 Msa0202920:CDS
GGTGGTGCTTGAGGAGGAGG+AGG 0.480691 2_1:+25863461 Msa0202920:CDS
GCTTGAGGAGGAGGAGGGCA+AGG 0.481657 2_1:+25863467 Msa0202920:CDS
TCGTCTTCGTCGTTTGGTGG+AGG 0.481845 2_1:+25863423 Msa0202920:CDS
TTGAGATCGTTACCACCTCT+TGG 0.485547 2_1:-25863540 None:intergenic
GTTTCGAAGGACGAGGACTT+GGG 0.486540 2_1:+25863344 Msa0202920:CDS
CTAGCGATCCGGATAGTGAA+TGG 0.487751 2_1:+25869956 Msa0202920:CDS
GAGGAGAGGAATGGATTATG+TGG 0.489464 2_1:-25862681 None:intergenic
ATCGAGGGACAGGTATTTGT+AGG 0.491378 2_1:-25863008 None:intergenic
AAACAAAGGTGAAGAGGAGA+TGG 0.493774 2_1:-25866433 None:intergenic
AAATTATACAAGTCCTAAAA+GGG 0.493965 2_1:+25866399 Msa0202920:CDS
GAGGTGCAAGTAGCACCATT+TGG 0.494112 2_1:-25871188 None:intergenic
TTGTAAATTATATATATAGC+TGG 0.501059 2_1:+25871360 Msa0202920:three_prime_UTR
CTGCATTGAGTGTTGATCAT+AGG 0.502333 2_1:-25869776 None:intergenic
TTAGTGGAAGAGGAGAGGAA+TGG 0.504232 2_1:-25862690 None:intergenic
AAATGTGAAAATCGAGGGAC+AGG 0.504793 2_1:-25863018 None:intergenic
TAATTGCTTCACTGATTCAC+TGG 0.505057 2_1:-25871312 None:intergenic
CGTCGTTTGGTGGAGGAAGT+GGG 0.507133 2_1:+25863430 Msa0202920:CDS
AAAGGGAGATCAGAAGAGTC+AGG 0.507865 2_1:+25870034 Msa0202920:CDS
CTGGTGTTTATATTACCATC+AGG 0.508052 2_1:+25869995 Msa0202920:CDS
TCTAGAGAAGCTGATCGCTC+TGG 0.508451 2_1:+25869913 Msa0202920:CDS
CTTGTGAGATTATTTATCAA+AGG 0.508544 2_1:+25871085 Msa0202920:exon
ATCTTGCTGGAGTTGGAAGC+GGG 0.510894 2_1:-25869004 None:intergenic
CATTATCAGTATGACTTAAG+TGG 0.511717 2_1:+25869805 Msa0202920:CDS
CCTGCAACCCGCCTCCGAAA+CGG 0.512550 2_1:+25863288 Msa0202920:CDS
GGGAGATGCATGCTAGACTA+TGG 0.512819 2_1:+25871027 Msa0202920:CDS
CAAGTATTGTGCATGTACTC+TGG 0.516771 2_1:-25871066 None:intergenic
GATCTTGCTGGAGTTGGAAG+CGG 0.517569 2_1:-25869005 None:intergenic
AAGGGGATATCAAGTGGAGA+AGG 0.522652 2_1:+25863390 Msa0202920:CDS
TTTATTCCGACCAACAGGAA+TGG 0.522733 2_1:+25869729 Msa0202920:CDS
GGTGGAGGAAGAGAGAACAA+TGG 0.523132 2_1:-25862751 None:intergenic
GTCTATGCCAGGCGGCAAAA+GGG 0.525569 2_1:+25870017 Msa0202920:CDS
CGACGTGATTAGATACCAAA+TGG 0.526280 2_1:+25871173 Msa0202920:three_prime_UTR
TGATGATATATCTGTCTTAG+CGG 0.526776 2_1:-25869863 None:intergenic
CGAGTCAGAAGTTTCTGACT+CGG 0.528267 2_1:+25863317 Msa0202920:CDS
GGGGTAAGAAGTGTGAATGC+TGG 0.528492 2_1:-25866376 None:intergenic
TAGTAATAATGTGGAGGGTG+TGG 0.528842 2_1:-25863047 None:intergenic
TGGAGGAAGTGGGAGGAGAG+TGG 0.530028 2_1:+25863440 Msa0202920:CDS
ATATATATAGCTGGTTACAT+TGG 0.532557 2_1:+25871369 Msa0202920:three_prime_UTR
TACCCCATTCCCATTCCTGT+TGG 0.532814 2_1:-25869739 None:intergenic
GCTTCCAACTCCAGCAAGAT+CGG 0.534958 2_1:+25869007 Msa0202920:CDS
ACAAATGGCAAGCTCAAAGA+TGG 0.542072 2_1:+25868916 Msa0202920:CDS
TGAGAATAGAAGTTTCAAGT+TGG 0.544007 2_1:-25871441 None:intergenic
TGGAGCTTTACAATGTTCAA+AGG 0.544250 2_1:+25868964 Msa0202920:CDS
ATTGCGTGATAGTTGCTCCT+TGG 0.544275 2_1:-25869707 None:intergenic
CCATTCCCATTCCTGTTGGT+CGG 0.545947 2_1:-25869735 None:intergenic
AGTTCGTCTTCGTCGTTTGG+TGG 0.546508 2_1:+25863420 Msa0202920:CDS
GAGGAAGAGAGAACAATGGA+AGG 0.547754 2_1:-25862747 None:intergenic
CGAGTCAGAAACTTCTGACT+CGG 0.548367 2_1:-25863316 None:intergenic
GATGAGCAATGCTAGCGATC+CGG 0.548410 2_1:+25869945 Msa0202920:CDS
TCCGGATAGTGAATGGGTTG+AGG 0.549861 2_1:+25869963 Msa0202920:CDS
CCGACCAACAGGAATGGGAA+TGG 0.551911 2_1:+25869735 Msa0202920:CDS
TTTGTTTAGTGGAAGAGGAG+AGG 0.552383 2_1:-25862695 None:intergenic
TGCTGGAGTTGGAAGCGGGA+AGG 0.553586 2_1:-25869000 None:intergenic
AGATGGAAGCTAGGTTAAAG+GGG 0.554570 2_1:+25863373 Msa0202920:CDS
TGGATATAGTAATAATGTGG+AGG 0.554943 2_1:-25863053 None:intergenic
GTGGGCAGAGAACTATGATA+AGG 0.559533 2_1:+25868938 Msa0202920:CDS
AGGAAGTGGGAGGAGAGTGG+TGG 0.559737 2_1:+25863443 Msa0202920:CDS
TTTCGAAGGACGAGGACTTG+GGG 0.562065 2_1:+25863345 Msa0202920:CDS
TAAGAAAATGTGAAAATCGA+GGG 0.562981 2_1:-25863023 None:intergenic
AATGGCAAGCTCAAAGATGG+TGG 0.564411 2_1:+25868919 Msa0202920:CDS
TTTGTGTCTCTTCCAAGAGG+TGG 0.565217 2_1:+25863528 Msa0202920:CDS
TTTAGGACTTGTATAATTTG+GGG 0.566684 2_1:-25866395 None:intergenic
TGCGTAGCAGTGAGTGACTT+CGG 0.567917 2_1:-25862980 None:intergenic
AGGAGGAGGAGGGCAAGGAG+TGG 0.572298 2_1:+25863472 Msa0202920:CDS
AAGTACCATGTGCTTGACAT+TGG 0.574498 2_1:-25862777 None:intergenic
TAGCGATCCGGATAGTGAAT+GGG 0.574671 2_1:+25869957 Msa0202920:CDS
AGGTGGATATAGTAATAATG+TGG 0.576024 2_1:-25863056 None:intergenic
CTAGTTATTATCTTCAATGT+GGG 0.577366 2_1:+25871254 Msa0202920:three_prime_UTR
GCCGCCTGGCATAGACCTGA+TGG 0.580566 2_1:-25870010 None:intergenic
GGATATAGTAATAATGTGGA+GGG 0.581067 2_1:-25863052 None:intergenic
AGCAGTGAGTGACTTCGGTT+AGG 0.581979 2_1:-25862975 None:intergenic
TGCTAATGGCTTACAAAATG+TGG 0.594362 2_1:+25871114 Msa0202920:three_prime_UTR
AGGCGGGTTGCAGGAGTACA+CGG 0.595322 2_1:-25863279 None:intergenic
ATTACCATCAGGTCTATGCC+AGG 0.596075 2_1:+25870006 Msa0202920:CDS
CTGACTCGGAGAAGTTTCGA+AGG 0.596187 2_1:+25863331 Msa0202920:CDS
GACCAACAGGAATGGGAATG+GGG 0.596999 2_1:+25869737 Msa0202920:CDS
ACTAGTTATTATCTTCAATG+TGG 0.597477 2_1:+25871253 Msa0202920:three_prime_UTR
AACTTCAAACAAAGGTGAAG+AGG 0.597620 2_1:-25866439 None:intergenic
AGGTTAAAGGGGATATCAAG+TGG 0.598201 2_1:+25863384 Msa0202920:CDS
GCTTGACATTGGAGTGGTGG+AGG 0.601038 2_1:-25862766 None:intergenic
ACTCGGAGCCACCGTTTCGG+AGG 0.606185 2_1:-25863299 None:intergenic
GATGCATGCTAGACTATGGT+GGG 0.606317 2_1:+25871031 Msa0202920:CDS
CGGAGAAGTTTCGAAGGACG+AGG 0.608398 2_1:+25863337 Msa0202920:CDS
AGGGGATATCAAGTGGAGAA+GGG 0.608844 2_1:+25863391 Msa0202920:CDS
AGTGACACCACCACTGACCA+AGG 0.612256 2_1:+25869690 Msa0202920:CDS
AGATGCATGCTAGACTATGG+TGG 0.613768 2_1:+25871030 Msa0202920:CDS
AACAAAGGTGAAGAGGAGAT+GGG 0.614438 2_1:-25866432 None:intergenic
AGTTGCTCCTTGGTCAGTGG+TGG 0.614864 2_1:-25869697 None:intergenic
CCAAACGACGAAGACGAACT+CGG 0.615906 2_1:-25863417 None:intergenic
ATGGCAAGCTCAAAGATGGT+GGG 0.617913 2_1:+25868920 Msa0202920:CDS
GCAACCCGCCTCCGAAACGG+TGG 0.618150 2_1:+25863291 Msa0202920:CDS
TGGCTTACAAAATGTGGAGG+TGG 0.618859 2_1:+25871120 Msa0202920:three_prime_UTR
GTGGTGCTTGAGGAGGAGGA+GGG 0.620273 2_1:+25863462 Msa0202920:CDS
TCCAGCAAGATCGGAAGACG+AGG 0.623900 2_1:+25869016 Msa0202920:CDS
ACTAATGGTTGAAACCTTTG+GGG 0.624759 2_1:-25869839 None:intergenic
TTAAGAAAATGTGAAAATCG+AGG 0.632620 2_1:-25863024 None:intergenic
TGGTATGAACTCAACCCCAA+AGG 0.637661 2_1:+25869825 Msa0202920:CDS
CCACTCCAATGTCAAGCACA+TGG 0.640239 2_1:+25862772 Msa0202920:five_prime_UTR
TTCGAAGGACGAGGACTTGG+GGG 0.642113 2_1:+25863346 Msa0202920:CDS
CGTGGTGAAACTTCAAACAA+AGG 0.645866 2_1:-25866447 None:intergenic
TCATATCATCTTCATGCGCG+CGG 0.647989 2_1:+25871225 Msa0202920:three_prime_UTR
GATAGTTGCTCCTTGGTCAG+TGG 0.651758 2_1:-25869700 None:intergenic
AGAGAACTATGATAAGGTCA+TGG 0.654539 2_1:+25868944 Msa0202920:CDS
TGTGCTTGACATTGGAGTGG+TGG 0.658061 2_1:-25862769 None:intergenic
GTGTTGATCATAGGAATCTG+AGG 0.660572 2_1:-25869767 None:intergenic
GAGGGACAGGTATTTGTAGG+CGG 0.662593 2_1:-25863005 None:intergenic
TGGGTTGAGGAAGATGAACC+TGG 0.668490 2_1:+25869976 Msa0202920:CDS
CTGATGGTAATATAAACACC+AGG 0.676903 2_1:-25869994 None:intergenic
GAGGTGGTAACGATCTCAAG+CGG 0.681808 2_1:+25863544 Msa0202920:CDS
CGTTTGGTGGAGGAAGTGGG+AGG 0.689174 2_1:+25863433 Msa0202920:CDS
GACATGTCAGATAAAAGACA+TGG 0.696747 2_1:+25863221 Msa0202920:CDS
ACAAAAGTAATCAAAACACC+AGG 0.701850 2_1:-25863510 None:intergenic
ACCATCAGGTCTATGCCAGG+CGG 0.710776 2_1:+25870009 Msa0202920:CDS
CCATGTGCTTGACATTGGAG+TGG 0.711179 2_1:-25862772 None:intergenic
TAATGGCTTACAAAATGTGG+AGG 0.731140 2_1:+25871117 Msa0202920:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAATTTTTATTTATTAA+AGG + chr2_1:25865915-25865934 Msa0202920:intron 0.0%
!! TAAAAAAAAAATTCAGAATT+AGG - chr2_1:25864453-25864472 None:intergenic 10.0%
!! AATTAAAAAAAATCAGAATT+AGG - chr2_1:25864609-25864628 None:intergenic 10.0%
!!! TTATAAAGTATAAATTTGTT+AGG - chr2_1:25866151-25866170 None:intergenic 10.0%
!!! CATTTTAAAACAAATTTTTT+TGG - chr2_1:25866895-25866914 None:intergenic 10.0%
!!! TAGTTTTAAAAGTAATATTT+TGG - chr2_1:25866998-25867017 None:intergenic 10.0%
!! AATATTCTAATAATTATGAT+TGG - chr2_1:25868447-25868466 None:intergenic 10.0%
!! ATAATTATTAGAATATTTCA+AGG + chr2_1:25868450-25868469 Msa0202920:intron 10.0%
!!! TTAACAAATTTGAATTTTTT+AGG + chr2_1:25870164-25870183 Msa0202920:intron 10.0%
!!! TAACAAATTTGAATTTTTTA+GGG + chr2_1:25870165-25870184 Msa0202920:intron 10.0%
!!! GTTTTTATTATTTTGTTTAG+TGG - chr2_1:25862709-25862728 None:intergenic 15.0%
!! GAAAATTAATTAGTAAAATG+AGG - chr2_1:25862909-25862928 None:intergenic 15.0%
!!! TTTTTGGTAAACATTTTATT+TGG - chr2_1:25864283-25864302 None:intergenic 15.0%
!!! AAGTGAATTTTATCTTATAA+CGG - chr2_1:25864502-25864521 None:intergenic 15.0%
!!! TATAACAAAAACAAAGTTTT+TGG + chr2_1:25864703-25864722 Msa0202920:intron 15.0%
!!! ATTTTTGTCAGATAATAATT+AGG + chr2_1:25864899-25864918 Msa0202920:intron 15.0%
!! TAGGATATTCTATTAAATTA+AGG + chr2_1:25864918-25864937 Msa0202920:intron 15.0%
!! AGGATATTCTATTAAATTAA+GGG + chr2_1:25864919-25864938 Msa0202920:intron 15.0%
!! AATATAATTTACCAAACAAA+AGG + chr2_1:25865069-25865088 Msa0202920:intron 15.0%
!!! AGATTTTGTTTTCTAAATTT+AGG - chr2_1:25865477-25865496 None:intergenic 15.0%
!!! AACAATGTAAAATATTTTGA+TGG - chr2_1:25866011-25866030 None:intergenic 15.0%
!!! TTTTATTTATGCAATTTGAT+GGG + chr2_1:25866672-25866691 Msa0202920:intron 15.0%
!!! TTTTGTCTTGTATATAATTT+AGG - chr2_1:25866721-25866740 None:intergenic 15.0%
!! ATAAAAAGTTATTATTGCAT+TGG - chr2_1:25866935-25866954 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr2_1:25867022-25867041 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr2_1:25867021-25867040 Msa0202920:intron 15.0%
!!! GTAATATACTTTTTTTTTGA+AGG - chr2_1:25867299-25867318 None:intergenic 15.0%
!!! CTAATTTTTTTTTTTTTCGA+AGG + chr2_1:25867612-25867631 Msa0202920:intron 15.0%
!!! TTTGAGTTGATTTTATATTA+TGG + chr2_1:25867739-25867758 Msa0202920:intron 15.0%
!!! TTGAGTTGATTTTATATTAT+GGG + chr2_1:25867740-25867759 Msa0202920:intron 15.0%
!!! ACTAAATGTTTTATAAGTTA+TGG + chr2_1:25867836-25867855 Msa0202920:intron 15.0%
!!! CAAATTCAACTTAAAAATTT+TGG + chr2_1:25868377-25868396 Msa0202920:intron 15.0%
!!! TATAGTTATCATTTTTTTTC+TGG + chr2_1:25868795-25868814 Msa0202920:intron 15.0%
!!! ATAGTTATCATTTTTTTTCT+GGG + chr2_1:25868796-25868815 Msa0202920:intron 15.0%
!!! TTAAATATATTCTTTTCACA+TGG - chr2_1:25869143-25869162 None:intergenic 15.0%
!! TATGATTTCAAAAATTTGAT+CGG - chr2_1:25869526-25869545 None:intergenic 15.0%
!! ATTCTTATATCTATAACTAT+AGG - chr2_1:25869589-25869608 None:intergenic 15.0%
!!! TAAATATCTAATAGTAGTTT+TGG - chr2_1:25870375-25870394 None:intergenic 15.0%
!! TTGTAAATTATATATATAGC+TGG + chr2_1:25871360-25871379 Msa0202920:three_prime_UTR 15.0%
!! ATGAAATAAATAGTTATGCA+TGG - chr2_1:25864739-25864758 None:intergenic 20.0%
!!! TAAAAAAGCTGTTTCAAAAT+TGG - chr2_1:25864780-25864799 None:intergenic 20.0%
!! AAGAAAAAAACACTATTTCA+TGG - chr2_1:25864815-25864834 None:intergenic 20.0%
!!! TAGTGTTTTTTTCTTAGAAT+TGG + chr2_1:25864820-25864839 Msa0202920:intron 20.0%
!!! AGTGTTTTTTTCTTAGAATT+GGG + chr2_1:25864821-25864840 Msa0202920:intron 20.0%
!!! TTTTACAAGAAAATGTGAAA+AGG - chr2_1:25865819-25865838 None:intergenic 20.0%
!!! TTTTCACATTTTCTTGTAAA+AGG + chr2_1:25865818-25865837 Msa0202920:intron 20.0%
!! TAAAACACAATAAGAAGAAA+TGG + chr2_1:25865855-25865874 Msa0202920:intron 20.0%
!!! AAATATTTTGATGGTGTATT+AGG - chr2_1:25866002-25866021 None:intergenic 20.0%
!! TTGTTGTCAATCAATTATAA+TGG + chr2_1:25866026-25866045 Msa0202920:intron 20.0%
!! AACGTAGTTATAATTAAAGT+TGG - chr2_1:25866070-25866089 None:intergenic 20.0%
!!! TATTGATTATGATTTATCGA+CGG + chr2_1:25866102-25866121 Msa0202920:intron 20.0%
!!! TTTTAGGACTTGTATAATTT+GGG - chr2_1:25866399-25866418 None:intergenic 20.0%
!! AAATTATACAAGTCCTAAAA+GGG + chr2_1:25866399-25866418 Msa0202920:CDS 20.0%
!! TCCTAAAGAAAAATTTATTC+TGG + chr2_1:25866498-25866517 Msa0202920:CDS 20.0%
!! AAGACAAAAACTGTTAATAT+AGG - chr2_1:25866654-25866673 None:intergenic 20.0%
!!! CTTTTATTTATGCAATTTGA+TGG + chr2_1:25866671-25866690 Msa0202920:intron 20.0%
!! TTTATTTATGCAATTTGATG+GGG + chr2_1:25866673-25866692 Msa0202920:intron 20.0%
!! TATCTATTTATCACTTTGTT+AGG - chr2_1:25866769-25866788 None:intergenic 20.0%
!! AAGTGATAAATAGATAACAT+AGG + chr2_1:25866773-25866792 Msa0202920:intron 20.0%
!! TAGTTTAATGACTAATAAGT+GGG - chr2_1:25866838-25866857 None:intergenic 20.0%
!! ATAGTTTAATGACTAATAAG+TGG - chr2_1:25866839-25866858 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr2_1:25867012-25867031 Msa0202920:intron 20.0%
!!! TAAGTTGAGAGTATTAATTA+AGG + chr2_1:25867146-25867165 Msa0202920:intron 20.0%
!!! TTATTACAACCGTTTTTAAA+AGG + chr2_1:25867181-25867200 Msa0202920:intron 20.0%
!!! AGTTTGAAACCTTTTAAAAA+CGG - chr2_1:25867193-25867212 None:intergenic 20.0%
!! TATGTAAGAGATTAAATTGA+CGG - chr2_1:25867398-25867417 None:intergenic 20.0%
!!! AGAACTAAATTTATCCATTT+TGG + chr2_1:25867641-25867660 Msa0202920:intron 20.0%
!! ATATATCATAAATTTGGGAA+GGG - chr2_1:25867802-25867821 None:intergenic 20.0%
!! TATATATCATAAATTTGGGA+AGG - chr2_1:25867803-25867822 None:intergenic 20.0%
!!! ATGTTTTATAAGTTATGGTA+TGG + chr2_1:25867841-25867860 Msa0202920:intron 20.0%
!! AAGACAAATATATGAAACTT+AGG - chr2_1:25867875-25867894 None:intergenic 20.0%
!! CACAAATTTAATAAATAGTG+TGG + chr2_1:25868056-25868075 Msa0202920:intron 20.0%
!!! AACAAATTTTAGATATAGTG+TGG + chr2_1:25868094-25868113 Msa0202920:intron 20.0%
!! ATTCTAATAATTATGATTGG+TGG - chr2_1:25868444-25868463 None:intergenic 20.0%
!!! CATTTTGCTACAATATATAA+AGG - chr2_1:25868540-25868559 None:intergenic 20.0%
!! TTATATATTGTAGCAAAATG+TGG + chr2_1:25868540-25868559 Msa0202920:intron 20.0%
!!! TATTTGTTATTTCTTCGAAT+TGG + chr2_1:25869378-25869397 Msa0202920:intron 20.0%
!! TTTATAACAAGCTTAAGAAA+CGG - chr2_1:25870950-25870969 None:intergenic 20.0%
!!! TTAAGCTTGTTATAAATCTA+CGG + chr2_1:25870954-25870973 Msa0202920:intron 20.0%
!!! ATTATTTTGTTTAGTGGAAG+AGG - chr2_1:25862703-25862722 None:intergenic 25.0%
! TAAGAAAATGTGAAAATCGA+GGG - chr2_1:25863026-25863045 None:intergenic 25.0%
! TTAAGAAAATGTGAAAATCG+AGG - chr2_1:25863027-25863046 None:intergenic 25.0%
! AGAAATGAAACGACAAAAAA+TGG - chr2_1:25863082-25863101 None:intergenic 25.0%
!! AATTTTTACGTGTTAACCTT+TGG - chr2_1:25863663-25863682 None:intergenic 25.0%
!! TGTCTTTTCTTTTTCTATGT+CGG + chr2_1:25863911-25863930 Msa0202920:intron 25.0%
! ACGTAAAATTAAGCAATTAC+TGG - chr2_1:25864107-25864126 None:intergenic 25.0%
!! GAAATTCATCATTCATTTTG+AGG + chr2_1:25864127-25864146 Msa0202920:intron 25.0%
!!! ACAATTGCTTTTCAACTTTT+TGG - chr2_1:25864299-25864318 None:intergenic 25.0%
! AAAAAGTTGAAAAGCAATTG+TGG + chr2_1:25864298-25864317 Msa0202920:intron 25.0%
! TGGAATTGAGTTAAGAATTT+AGG + chr2_1:25864318-25864337 Msa0202920:intron 25.0%
!!! TCTTTTTTTCTGAAAGAATG+TGG + chr2_1:25864346-25864365 Msa0202920:intron 25.0%
!! TTTTTGACCAAAAAGAACTT+CGG + chr2_1:25864375-25864394 Msa0202920:intron 25.0%
!! TAAATATCCGAAGTTCTTTT+TGG - chr2_1:25864385-25864404 None:intergenic 25.0%
! ATGAAATCAATAATCATGCA+TGG - chr2_1:25864411-25864430 None:intergenic 25.0%
!! ATAACGGAAAACTATTTCTT+TGG - chr2_1:25864486-25864505 None:intergenic 25.0%
!! GTTAGTTATATCCTTTTGTT+TGG - chr2_1:25865083-25865102 None:intergenic 25.0%
!!! AATCTACATCTAGTTTTCTT+TGG - chr2_1:25865121-25865140 None:intergenic 25.0%
! TTTAACATCTCAATATCACA+TGG + chr2_1:25865252-25865271 Msa0202920:intron 25.0%
!!! GGTTTGTTTATTTGTTTTCA+AGG + chr2_1:25865273-25865292 Msa0202920:intron 25.0%
!! CTTTTATGCAAGTTTGAATT+TGG + chr2_1:25865400-25865419 Msa0202920:intron 25.0%
! TCTTAGAAATTAGCTGAAAT+GGG - chr2_1:25865570-25865589 None:intergenic 25.0%
! CATCTAAATGTTAGAGTTTA+AGG + chr2_1:25865620-25865639 Msa0202920:intron 25.0%
! AATTTGACCAAAAATGTGTT+TGG - chr2_1:25865646-25865665 None:intergenic 25.0%
!!! AACACATTTTTGGTCAAATT+TGG + chr2_1:25865646-25865665 Msa0202920:intron 25.0%
!!! TCTTGTAAAAGGAGTTTTTT+TGG + chr2_1:25865829-25865848 Msa0202920:intron 25.0%
!!! CTTGTAAAAGGAGTTTTTTT+GGG + chr2_1:25865830-25865849 Msa0202920:intron 25.0%
! ACAAATTATGGGAGAAATAT+AGG - chr2_1:25866323-25866342 None:intergenic 25.0%
!! ATATTTCTCCCATAATTTGT+AGG + chr2_1:25866323-25866342 Msa0202920:intron 25.0%
! TTGTTCAACCTACAAATTAT+GGG - chr2_1:25866334-25866353 None:intergenic 25.0%
!! TTTAGGACTTGTATAATTTG+GGG - chr2_1:25866398-25866417 None:intergenic 25.0%
!!! CTTTTAGGACTTGTATAATT+TGG - chr2_1:25866400-25866419 None:intergenic 25.0%
! CAAATTATACAAGTCCTAAA+AGG + chr2_1:25866398-25866417 Msa0202920:CDS 25.0%
!!! TTTTCTTTAGGAACACTTTT+GGG - chr2_1:25866490-25866509 None:intergenic 25.0%
!!! TTTTTCTTTAGGAACACTTT+TGG - chr2_1:25866491-25866510 None:intergenic 25.0%
!! GCCAGAATAAATTTTTCTTT+AGG - chr2_1:25866502-25866521 None:intergenic 25.0%
! TCTTGTATATAATTTAGGAG+TGG - chr2_1:25866716-25866735 None:intergenic 25.0%
!! TATACTTGTTACACTATACT+TGG - chr2_1:25867262-25867281 None:intergenic 25.0%
! ATATGAAAAATCTGTCTTGT+CGG + chr2_1:25867353-25867372 Msa0202920:intron 25.0%
!!! TTTTTTGAAATCCATCTTGT+TGG - chr2_1:25867434-25867453 None:intergenic 25.0%
!!! TTGATATCCAACTTCTTTTT+TGG + chr2_1:25867765-25867784 Msa0202920:intron 25.0%
!!! TGATATCCAACTTCTTTTTT+GGG + chr2_1:25867766-25867785 Msa0202920:intron 25.0%
! TTAATACCCAAAAAAGAAGT+TGG - chr2_1:25867775-25867794 None:intergenic 25.0%
!! AAATTTGTGATCTGAAATTC+AGG - chr2_1:25868045-25868064 None:intergenic 25.0%
! TTAATAAATAGTGTGGTCTT+AGG + chr2_1:25868063-25868082 Msa0202920:intron 25.0%
! AACACAATCATACGATATAA+TGG + chr2_1:25868410-25868429 Msa0202920:intron 25.0%
! TTAGAATATTTCAAGGTTAG+AGG + chr2_1:25868457-25868476 Msa0202920:intron 25.0%
! TGCAACATCATAAAACAAAA+CGG + chr2_1:25868749-25868768 Msa0202920:intron 25.0%
!! AAATTCTCACTTTGGTAATT+TGG + chr2_1:25869040-25869059 Msa0202920:intron 25.0%
! CAAAGTATAAATCTTCACTT+TGG + chr2_1:25869095-25869114 Msa0202920:intron 25.0%
!!! TGAATTGTTGTTGGAATTTT+AGG + chr2_1:25869469-25869488 Msa0202920:intron 25.0%
! ATCATATATTAGTCGCATAT+TGG + chr2_1:25869540-25869559 Msa0202920:intron 25.0%
!! TAAGTCATACTGATAATGTT+TGG - chr2_1:25869803-25869822 None:intergenic 25.0%
!!! AATTTGAATTTTTTAGGGTC+TGG + chr2_1:25870170-25870189 Msa0202920:intron 25.0%
!! ATATTTTCACTTCACAAAAC+AGG - chr2_1:25870258-25870277 None:intergenic 25.0%
!! AGATAGTTAATGTCATTTCA+TGG + chr2_1:25870415-25870434 Msa0202920:intron 25.0%
! TTAACTCTTCAATTCATAAG+AGG + chr2_1:25870541-25870560 Msa0202920:intron 25.0%
! TTGAATATTGAAGTCACATT+TGG - chr2_1:25870847-25870866 None:intergenic 25.0%
! CTTGTGAGATTATTTATCAA+AGG + chr2_1:25871085-25871104 Msa0202920:exon 25.0%
! TATGAAGTTCAAAAAGATAG+AGG - chr2_1:25871210-25871229 None:intergenic 25.0%
! ACTAGTTATTATCTTCAATG+TGG + chr2_1:25871253-25871272 Msa0202920:three_prime_UTR 25.0%
! CTAGTTATTATCTTCAATGT+GGG + chr2_1:25871254-25871273 Msa0202920:three_prime_UTR 25.0%
! TTCTTGAAACTTATGAGTAA+TGG + chr2_1:25871337-25871356 Msa0202920:three_prime_UTR 25.0%
! ATATATATAGCTGGTTACAT+TGG + chr2_1:25871369-25871388 Msa0202920:three_prime_UTR 25.0%
GGATATAGTAATAATGTGGA+GGG - chr2_1:25863055-25863074 None:intergenic 30.0%
TGGATATAGTAATAATGTGG+AGG - chr2_1:25863056-25863075 None:intergenic 30.0%
AGGTGGATATAGTAATAATG+TGG - chr2_1:25863059-25863078 None:intergenic 30.0%
AATGAAACGACAAAAAATGG+AGG - chr2_1:25863079-25863098 None:intergenic 30.0%
!!! AGCATGTTTTTTGGTTCTTT+TGG - chr2_1:25863126-25863145 None:intergenic 30.0%
!!! ATGCATGTAAGCATGTTTTT+TGG - chr2_1:25863135-25863154 None:intergenic 30.0%
ACAAAAGTAATCAAAACACC+AGG - chr2_1:25863513-25863532 None:intergenic 30.0%
TTAGAGGTCAATGAATGATA+TGG + chr2_1:25863828-25863847 Msa0202920:intron 30.0%
CCATATTCAATCAAAGAAGA+GGG - chr2_1:25863855-25863874 None:intergenic 30.0%
! TTTTCTTTTTCTATGTCGGA+GGG + chr2_1:25863915-25863934 Msa0202920:intron 30.0%
GAACTGTAAAAGAAGAGAAA+AGG - chr2_1:25864007-25864026 None:intergenic 30.0%
!! CAATTACTGGCTTTAAGATA+GGG - chr2_1:25864094-25864113 None:intergenic 30.0%
ATGAAATCAATAATCGTGCA+TGG - chr2_1:25864573-25864592 None:intergenic 30.0%
!!! ATTGTTTTTGACCAAGAAAG+AGG + chr2_1:25864626-25864645 Msa0202920:intron 30.0%
ACAAATAGAATCCTCTTTCT+TGG - chr2_1:25864640-25864659 None:intergenic 30.0%
AAAAAAATCCAAAACAGACG+TGG + chr2_1:25865223-25865242 Msa0202920:intron 30.0%
! AATTTAATCCACGTCTGTTT+TGG - chr2_1:25865234-25865253 None:intergenic 30.0%
CTCTTAGAAATTAGCTGAAA+TGG - chr2_1:25865571-25865590 None:intergenic 30.0%
!! TTTAAGGCCAAACACATTTT+TGG + chr2_1:25865636-25865655 Msa0202920:intron 30.0%
!! TTTTTGGTCAAATTTGGACT+TGG + chr2_1:25865652-25865671 Msa0202920:intron 30.0%
GGTACTAGAAAATTGAACTT+AGG - chr2_1:25865764-25865783 None:intergenic 30.0%
AATGCTTATGTTTGGTATCA+CGG - chr2_1:25865965-25865984 None:intergenic 30.0%
TCTTATCCAATGCTTATGTT+TGG - chr2_1:25865973-25865992 None:intergenic 30.0%
CTTGTTCAACCTACAAATTA+TGG - chr2_1:25866335-25866354 None:intergenic 30.0%
TGTGTTAGGAACCTTTAAAT+TGG + chr2_1:25866552-25866571 Msa0202920:intron 30.0%
GTGTTAGGAACCTTTAAATT+GGG + chr2_1:25866553-25866572 Msa0202920:intron 30.0%
! GTAATGTGCAGAGTATTAAT+TGG - chr2_1:25866973-25866992 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr2_1:25867103-25867122 None:intergenic 30.0%
TTAAATATAGAAAGGTGACG+TGG - chr2_1:25867696-25867715 None:intergenic 30.0%
TTTAGATATAGTGTGGTCTT+AGG + chr2_1:25868101-25868120 Msa0202920:intron 30.0%
GGTAATTGACATCAAAAGTT+TGG + chr2_1:25868179-25868198 Msa0202920:intron 30.0%
!! AGTTGAATTTGCAGTTTTAG+TGG - chr2_1:25868368-25868387 None:intergenic 30.0%
CATACGATATAATGGCTAAT+TGG + chr2_1:25868418-25868437 Msa0202920:intron 30.0%
! AATTTAAAATCGTGAATCGC+GGG - chr2_1:25868483-25868502 None:intergenic 30.0%
! CAATTTAAAATCGTGAATCG+CGG - chr2_1:25868484-25868503 None:intergenic 30.0%
! CGATTCACGATTTTAAATTG+TGG + chr2_1:25868484-25868503 Msa0202920:intron 30.0%
!!! GATTTTCGAGTTTTTCTCAA+TGG - chr2_1:25868605-25868624 None:intergenic 30.0%
GCAACATCATAAAACAAAAC+GGG + chr2_1:25868750-25868769 Msa0202920:intron 30.0%
CAACATCATAAAACAAAACG+GGG + chr2_1:25868751-25868770 Msa0202920:intron 30.0%
GTCGCGATATATTTAACAAA+TGG + chr2_1:25868901-25868920 Msa0202920:intron 30.0%
ATAAATCTTCACTTTGGTCT+AGG + chr2_1:25869101-25869120 Msa0202920:intron 30.0%
!! CACATGGAAAAAGTATCAAT+TGG - chr2_1:25869127-25869146 None:intergenic 30.0%
TTGTCTCACTAACAAAAACA+AGG - chr2_1:25869290-25869309 None:intergenic 30.0%
!! TTTCTTCGTTTTTGTCGAAT+CGG - chr2_1:25869327-25869346 None:intergenic 30.0%
!! CAAATATGAGTTGAGTTTTG+AGG + chr2_1:25869349-25869368 Msa0202920:intron 30.0%
CAACAATTCACTGTACTTAT+AGG - chr2_1:25869459-25869478 None:intergenic 30.0%
TAAGTACAGTGAATTGTTGT+TGG + chr2_1:25869460-25869479 Msa0202920:intron 30.0%
GATTTCAAAAATTTGATCGG+TGG - chr2_1:25869523-25869542 None:intergenic 30.0%
CATTATCAGTATGACTTAAG+TGG + chr2_1:25869805-25869824 Msa0202920:CDS 30.0%
TGATGATATATCTGTCTTAG+CGG - chr2_1:25869866-25869885 None:intergenic 30.0%
TATGCTTTGTACCAATTCTT+TGG + chr2_1:25870063-25870082 Msa0202920:intron 30.0%
ATAGAGTCTAACCAAAGAAT+TGG - chr2_1:25870077-25870096 None:intergenic 30.0%
!!! GTAGTTTTGGTGAACAATTT+GGG - chr2_1:25870362-25870381 None:intergenic 30.0%
!!! AGTAGTTTTGGTGAACAATT+TGG - chr2_1:25870363-25870382 None:intergenic 30.0%
TCTTCAATTCATAAGAGGAA+AGG + chr2_1:25870546-25870565 Msa0202920:intron 30.0%
CAATGTAATACGATTGAATG+TGG + chr2_1:25870737-25870756 Msa0202920:intron 30.0%
AAATTTACACGCAGTAACTT+TGG - chr2_1:25870795-25870814 None:intergenic 30.0%
TGTTACAGTCGAGAAAAATT+TGG + chr2_1:25871005-25871024 Msa0202920:intron 30.0%
GTTACAGTCGAGAAAAATTT+GGG + chr2_1:25871006-25871025 Msa0202920:intron 30.0%
TTACAGTCGAGAAAAATTTG+GGG + chr2_1:25871007-25871026 Msa0202920:intron 30.0%
! TGAGAATAGAAGTTTCAAGT+TGG - chr2_1:25871444-25871463 None:intergenic 30.0%
! GAATCTTCTTCGAGTTTCTT+TGG - chr2_1:25863165-25863184 None:intergenic 35.0%
GACATGTCAGATAAAAGACA+TGG + chr2_1:25863221-25863240 Msa0202920:CDS 35.0%
GTTAACCTTTGGATTCTTTG+AGG - chr2_1:25863652-25863671 None:intergenic 35.0%
! ATTCGATCCAAATATCGACT+AGG + chr2_1:25863730-25863749 Msa0202920:intron 35.0%
TCAACTGATAGCAGATGTAT+TGG + chr2_1:25863772-25863791 Msa0202920:intron 35.0%
!!! TTGTGATGTCCTTTTGAGAT+TGG + chr2_1:25863796-25863815 Msa0202920:intron 35.0%
CCCTCTTCTTTGATTGAATA+TGG + chr2_1:25863852-25863871 Msa0202920:intron 35.0%
GCCATATTCAATCAAAGAAG+AGG - chr2_1:25863856-25863875 None:intergenic 35.0%
CTTTGATTGAATATGGCTAG+TGG + chr2_1:25863859-25863878 Msa0202920:intron 35.0%
! GTGATGATGATAGTGAGTAA+TGG + chr2_1:25863886-25863905 Msa0202920:intron 35.0%
! CTTTTCTTTTTCTATGTCGG+AGG + chr2_1:25863914-25863933 Msa0202920:intron 35.0%
!! GCAATTACTGGCTTTAAGAT+AGG - chr2_1:25864095-25864114 None:intergenic 35.0%
AATTACCGTGTCTTTCTGAT+TGG + chr2_1:25864223-25864242 Msa0202920:intron 35.0%
AGAAACCAATCAGAAAGACA+CGG - chr2_1:25864231-25864250 None:intergenic 35.0%
!!! CTACATCTAGTTTTCTTTGG+AGG - chr2_1:25865118-25865137 None:intergenic 35.0%
GATCCTTCAACAAACAATTG+AGG + chr2_1:25865431-25865450 Msa0202920:intron 35.0%
! AAGCCTCAATTGTTTGTTGA+AGG - chr2_1:25865437-25865456 None:intergenic 35.0%
GTCAAATTTGGACTTGGATT+GGG + chr2_1:25865658-25865677 Msa0202920:intron 35.0%
TCAAATTTGGACTTGGATTG+GGG + chr2_1:25865659-25865678 Msa0202920:intron 35.0%
! TTTCTAGTACCATGAGTGAT+AGG + chr2_1:25865773-25865792 Msa0202920:intron 35.0%
GTGATACCAAACATAAGCAT+TGG + chr2_1:25865964-25865983 Msa0202920:intron 35.0%
!!! ATGCTGGTTTTGGTATGAAA+TGG - chr2_1:25866363-25866382 None:intergenic 35.0%
!! AAGTCCTAAAAGGGTTTTGT+GGG + chr2_1:25866408-25866427 Msa0202920:CDS 35.0%
AACTTCAAACAAAGGTGAAG+AGG - chr2_1:25866442-25866461 None:intergenic 35.0%
!! TTTGGGATTGCTTTTAGCAA+AGG - chr2_1:25866473-25866492 None:intergenic 35.0%
AACGACATGACCCAATTTAA+AGG - chr2_1:25866566-25866585 None:intergenic 35.0%
TTAAATTGGGTCATGTCGTT+TGG + chr2_1:25866566-25866585 Msa0202920:intron 35.0%
TTTCTCATATCTCTTCATGC+CGG + chr2_1:25866610-25866629 Msa0202920:intron 35.0%
ACAAGACAAAATGTGAACCT+AGG + chr2_1:25866730-25866749 Msa0202920:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr2_1:25866869-25866888 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr2_1:25866969-25866988 None:intergenic 35.0%
! ATGTGCAGAGTATTAATTGG+AGG - chr2_1:25866970-25866989 None:intergenic 35.0%
!!! GACACTCATTTTGAAACAGA+GGG + chr2_1:25867108-25867127 Msa0202920:intron 35.0%
AATAGCAAGAACCAACAAGA+TGG + chr2_1:25867420-25867439 Msa0202920:intron 35.0%
GACAAACAGAATCACTTATG+TGG - chr2_1:25868013-25868032 None:intergenic 35.0%
CTAGACATTCAAAAGCAAGT+GGG - chr2_1:25868206-25868225 None:intergenic 35.0%
TCTAGACATTCAAAAGCAAG+TGG - chr2_1:25868207-25868226 None:intergenic 35.0%
GTCTAGACAACTTCATTGTA+TGG + chr2_1:25868220-25868239 Msa0202920:intron 35.0%
CAATGGCATTGTATTAGCAA+TGG - chr2_1:25868588-25868607 None:intergenic 35.0%
TATTGTGACCGCAATTACAA+TGG + chr2_1:25868629-25868648 Msa0202920:intron 35.0%
CAAGTCAACCATTGTAATTG+CGG - chr2_1:25868640-25868659 None:intergenic 35.0%
AGAGAACTATGATAAGGTCA+TGG + chr2_1:25868944-25868963 Msa0202920:CDS 35.0%
TGGAGCTTTACAATGTTCAA+AGG + chr2_1:25868964-25868983 Msa0202920:CDS 35.0%
AATTTGGTATGCAGATGCAT+AGG + chr2_1:25869056-25869075 Msa0202920:intron 35.0%
TAGTGAGACAATGACTTGAT+TGG + chr2_1:25869299-25869318 Msa0202920:intron 35.0%
!! AAGTTGATGTCTCACTTGTT+AGG + chr2_1:25869409-25869428 Msa0202920:intron 35.0%
! AGTTGATGTCTCACTTGTTA+GGG + chr2_1:25869410-25869429 Msa0202920:intron 35.0%
ACTAATGGTTGAAACCTTTG+GGG - chr2_1:25869842-25869861 None:intergenic 35.0%
CACTAATGGTTGAAACCTTT+GGG - chr2_1:25869843-25869862 None:intergenic 35.0%
CTGATGGTAATATAAACACC+AGG - chr2_1:25869997-25870016 None:intergenic 35.0%
CTGGTGTTTATATTACCATC+AGG + chr2_1:25869995-25870014 Msa0202920:CDS 35.0%
GAATGCAGACAATGCAAATT+AGG - chr2_1:25870130-25870149 None:intergenic 35.0%
AACACGACTAAGGTTCAAAT+TGG - chr2_1:25870217-25870236 None:intergenic 35.0%
ATTTGAACCTTAGTCGTGTT+CGG + chr2_1:25870217-25870236 Msa0202920:intron 35.0%
GACATTAACTATCTCAAGCA+AGG - chr2_1:25870409-25870428 None:intergenic 35.0%
GTTTGACAAGGTCGAAAAAT+AGG + chr2_1:25870473-25870492 Msa0202920:intron 35.0%
! ACTAATTTAGAGTTCAGTCG+AGG + chr2_1:25870575-25870594 Msa0202920:intron 35.0%
GTCGAGGTATAAGTAAAATC+AGG + chr2_1:25870591-25870610 Msa0202920:intron 35.0%
GTTTAGCTAGGAACAAAACT+TGG + chr2_1:25870624-25870643 Msa0202920:intron 35.0%
CAGATAAAGTCAAATCACTC+TGG - chr2_1:25870656-25870675 None:intergenic 35.0%
TTGATGTAGCAACAACTAAG+TGG - chr2_1:25870709-25870728 None:intergenic 35.0%
TAGTTGTTGCTACATCAAGT+TGG + chr2_1:25870711-25870730 Msa0202920:intron 35.0%
GTCACATTTGGCGATAAATT+TGG - chr2_1:25870835-25870854 None:intergenic 35.0%
!! ATCAAAGGATTTGCTGCTAA+TGG + chr2_1:25871100-25871119 Msa0202920:three_prime_UTR 35.0%
TGCTAATGGCTTACAAAATG+TGG + chr2_1:25871114-25871133 Msa0202920:three_prime_UTR 35.0%
TAATGGCTTACAAAATGTGG+AGG + chr2_1:25871117-25871136 Msa0202920:three_prime_UTR 35.0%
!! TAATTGCTTCACTGATTCAC+TGG - chr2_1:25871315-25871334 None:intergenic 35.0%
TTTGTTTAGTGGAAGAGGAG+AGG - chr2_1:25862698-25862717 None:intergenic 40.0%
AAGTACCATGTGCTTGACAT+TGG - chr2_1:25862780-25862799 None:intergenic 40.0%
AAATGTGAAAATCGAGGGAC+AGG - chr2_1:25863021-25863040 None:intergenic 40.0%
TAGTAATAATGTGGAGGGTG+TGG - chr2_1:25863050-25863069 None:intergenic 40.0%
GAAACGACAAAAAATGGAGG+TGG - chr2_1:25863076-25863095 None:intergenic 40.0%
GAGATGGAAGCTAGGTTAAA+GGG + chr2_1:25863372-25863391 Msa0202920:CDS 40.0%
AGATGGAAGCTAGGTTAAAG+GGG + chr2_1:25863373-25863392 Msa0202920:CDS 40.0%
AGGTTAAAGGGGATATCAAG+TGG + chr2_1:25863384-25863403 Msa0202920:CDS 40.0%
! ACTTTTGTGTCTCTTCCAAG+AGG + chr2_1:25863525-25863544 Msa0202920:CDS 40.0%
! CCTTTGGATTCTTTGAGGAA+AGG - chr2_1:25863647-25863666 None:intergenic 40.0%
CCTTTCCTCAAAGAATCCAA+AGG + chr2_1:25863644-25863663 Msa0202920:intron 40.0%
TCTCTGACCTAGTCGATATT+TGG - chr2_1:25863740-25863759 None:intergenic 40.0%
GGTCAAATTTGGACTTGGAT+TGG + chr2_1:25865657-25865676 Msa0202920:intron 40.0%
CACATTTGTCCTATCACTCA+TGG - chr2_1:25865785-25865804 None:intergenic 40.0%
!!! CTGGTTTTGGTATGAAATGG+TGG - chr2_1:25866360-25866379 None:intergenic 40.0%
!!! AGAAGTGTGAATGCTGGTTT+TGG - chr2_1:25866373-25866392 None:intergenic 40.0%
! CAAGTCCTAAAAGGGTTTTG+TGG + chr2_1:25866407-25866426 Msa0202920:CDS 40.0%
!! AGTCCTAAAAGGGTTTTGTG+GGG + chr2_1:25866409-25866428 Msa0202920:CDS 40.0%
AACAAAGGTGAAGAGGAGAT+GGG - chr2_1:25866435-25866454 None:intergenic 40.0%
AAACAAAGGTGAAGAGGAGA+TGG - chr2_1:25866436-25866455 None:intergenic 40.0%
CGTGGTGAAACTTCAAACAA+AGG - chr2_1:25866450-25866469 None:intergenic 40.0%
! TCTGGCTCCAAAGTAATTTG+TGG + chr2_1:25866516-25866535 Msa0202920:intron 40.0%
! CTGGCTCCAAAGTAATTTGT+GGG + chr2_1:25866517-25866536 Msa0202920:intron 40.0%
! TGGCTCCAAAGTAATTTGTG+GGG + chr2_1:25866518-25866537 Msa0202920:intron 40.0%
GTTCCTAACACAGTTAACCT+TGG - chr2_1:25866544-25866563 None:intergenic 40.0%
GATGACAAAGTCACACAATC+CGG - chr2_1:25866632-25866651 None:intergenic 40.0%
AGACAAAATGTGAACCTAGG+TGG + chr2_1:25866733-25866752 Msa0202920:intron 40.0%
GACAAAATGTGAACCTAGGT+GGG + chr2_1:25866734-25866753 Msa0202920:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_1:25866865-25866884 None:intergenic 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + chr2_1:25867107-25867126 Msa0202920:intron 40.0%
GTTGAGTGCTCTATCCAAAA+TGG - chr2_1:25867658-25867677 None:intergenic 40.0%
! TCGTAAGATAAAAGCACGCA+TGG + chr2_1:25867912-25867931 Msa0202920:intron 40.0%
CGCATGGCATTTGTGTATAT+TGG + chr2_1:25867928-25867947 Msa0202920:intron 40.0%
AATCCCTACCATTATGTTGC+TGG + chr2_1:25867974-25867993 Msa0202920:intron 40.0%
! ATAGTGTGGTCTTAGGCTAT+TGG + chr2_1:25868070-25868089 Msa0202920:intron 40.0%
TGGCATTGTATTAGCAATGG+TGG - chr2_1:25868585-25868604 None:intergenic 40.0%
CATCATAAAACAAAACGGGG+TGG + chr2_1:25868754-25868773 Msa0202920:intron 40.0%
ACAAATGGCAAGCTCAAAGA+TGG + chr2_1:25868916-25868935 Msa0202920:CDS 40.0%
GACGAGGTAAATTCTCACTT+TGG + chr2_1:25869032-25869051 Msa0202920:intron 40.0%
ATTTGATCGGTGGTTCATAG+TGG - chr2_1:25869513-25869532 None:intergenic 40.0%
TTTATTCCGACCAACAGGAA+TGG + chr2_1:25869729-25869748 Msa0202920:CDS 40.0%
TTATTCCGACCAACAGGAAT+GGG + chr2_1:25869730-25869749 Msa0202920:CDS 40.0%
! GTGTTGATCATAGGAATCTG+AGG - chr2_1:25869770-25869789 None:intergenic 40.0%
!! CTGCATTGAGTGTTGATCAT+AGG - chr2_1:25869779-25869798 None:intergenic 40.0%
GCACTAATGGTTGAAACCTT+TGG - chr2_1:25869844-25869863 None:intergenic 40.0%
CAGACCATGATTGTTTGACA+AGG + chr2_1:25870461-25870480 Msa0202920:intron 40.0%
TCGACCTTGTCAAACAATCA+TGG - chr2_1:25870468-25870487 None:intergenic 40.0%
!! GGTCAATGACTAGTTTAGCT+AGG + chr2_1:25870612-25870631 Msa0202920:intron 40.0%
GCAGTAACTTTGGCAAAATC+AGG - chr2_1:25870785-25870804 None:intergenic 40.0%
TACACGCACACATAAAGCAA+CGG - chr2_1:25870879-25870898 None:intergenic 40.0%
! CAAGTATTGTGCATGTACTC+TGG - chr2_1:25871069-25871088 None:intergenic 40.0%
CGACGTGATTAGATACCAAA+TGG + chr2_1:25871173-25871192 Msa0202920:three_prime_UTR 40.0%
!! GAGGAGAGGAATGGATTATG+TGG - chr2_1:25862684-25862703 None:intergenic 45.0%
TTAGTGGAAGAGGAGAGGAA+TGG - chr2_1:25862693-25862712 None:intergenic 45.0%
GAGGAAGAGAGAACAATGGA+AGG - chr2_1:25862750-25862769 None:intergenic 45.0%
ATCGAGGGACAGGTATTTGT+AGG - chr2_1:25863011-25863030 None:intergenic 45.0%
! GACATGGCATTGAAAGCTTC+AGG + chr2_1:25863237-25863256 Msa0202920:CDS 45.0%
CGAGTCAGAAACTTCTGACT+CGG - chr2_1:25863319-25863338 None:intergenic 45.0%
CGAGTCAGAAGTTTCTGACT+CGG + chr2_1:25863317-25863336 Msa0202920:CDS 45.0%
GGAGATGGAAGCTAGGTTAA+AGG + chr2_1:25863371-25863390 Msa0202920:CDS 45.0%
AAGGGGATATCAAGTGGAGA+AGG + chr2_1:25863390-25863409 Msa0202920:CDS 45.0%
AGGGGATATCAAGTGGAGAA+GGG + chr2_1:25863391-25863410 Msa0202920:CDS 45.0%
TTTGTGTCTCTTCCAAGAGG+TGG + chr2_1:25863528-25863547 Msa0202920:CDS 45.0%
TTGAGATCGTTACCACCTCT+TGG - chr2_1:25863543-25863562 None:intergenic 45.0%
GTAACGATCTCAAGCGGATA+CGG + chr2_1:25863550-25863569 Msa0202920:CDS 45.0%
!!! GATGTCCTTTTGAGATTGGC+AGG + chr2_1:25863800-25863819 Msa0202920:intron 45.0%
CAACACCTGCCAATCTCAAA+AGG - chr2_1:25863808-25863827 None:intergenic 45.0%
!! AGATTGGCAGGTGTTGTTAG+AGG + chr2_1:25863812-25863831 Msa0202920:intron 45.0%
AGTCGTACTAGTGCAATGCT+AGG + chr2_1:25865368-25865387 Msa0202920:intron 45.0%
! ATTTGGACTTGGATTGGGGT+AGG + chr2_1:25865663-25865682 Msa0202920:intron 45.0%
! TTTGGACTTGGATTGGGGTA+GGG + chr2_1:25865664-25865683 Msa0202920:intron 45.0%
!! GATTGCTTTTAGCAAAGGCG+TGG - chr2_1:25866468-25866487 None:intergenic 45.0%
CTTGGCCCCACAAATTACTT+TGG - chr2_1:25866526-25866545 None:intergenic 45.0%
! CAAAGTAATTTGTGGGGCCA+AGG + chr2_1:25866524-25866543 Msa0202920:intron 45.0%
! ATTGGGTCATGTCGTTTGGT+CGG + chr2_1:25866570-25866589 Msa0202920:intron 45.0%
TGTGAACCTAGGTGGGTAAT+AGG + chr2_1:25866741-25866760 Msa0202920:intron 45.0%
GTGAACCTAGGTGGGTAATA+GGG + chr2_1:25866742-25866761 Msa0202920:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr2_1:25866866-25866885 None:intergenic 45.0%
GCACCACAAGTCATCATGTA+GGG - chr2_1:25867954-25867973 None:intergenic 45.0%
TGCACCACAAGTCATCATGT+AGG - chr2_1:25867955-25867974 None:intergenic 45.0%
CCACCAGCAACATAATGGTA+GGG - chr2_1:25867980-25867999 None:intergenic 45.0%
CCTACCATTATGTTGCTGGT+GGG + chr2_1:25867978-25867997 Msa0202920:intron 45.0%
ATGTGGACAACTACTGCTCA+TGG + chr2_1:25868557-25868576 Msa0202920:intron 45.0%
AATGGCAAGCTCAAAGATGG+TGG + chr2_1:25868919-25868938 Msa0202920:CDS 45.0%
ATGGCAAGCTCAAAGATGGT+GGG + chr2_1:25868920-25868939 Msa0202920:CDS 45.0%
GTGGGCAGAGAACTATGATA+AGG + chr2_1:25868938-25868957 Msa0202920:CDS 45.0%
GGTATGCAGATGCATAGGTA+CGG + chr2_1:25869061-25869080 Msa0202920:intron 45.0%
ATTGCGTGATAGTTGCTCCT+TGG - chr2_1:25869710-25869729 None:intergenic 45.0%
CGCAATTTATTCCGACCAAC+AGG + chr2_1:25869724-25869743 Msa0202920:CDS 45.0%
TGGTATGAACTCAACCCCAA+AGG + chr2_1:25869825-25869844 Msa0202920:CDS 45.0%
ATCTGTCTTAGCGGCACTAA+TGG - chr2_1:25869857-25869876 None:intergenic 45.0%
TAGCGATCCGGATAGTGAAT+GGG + chr2_1:25869957-25869976 Msa0202920:CDS 45.0%
TCCTCAACCCATTCACTATC+CGG - chr2_1:25869967-25869986 None:intergenic 45.0%
ATTACCATCAGGTCTATGCC+AGG + chr2_1:25870006-25870025 Msa0202920:CDS 45.0%
AAAGGGAGATCAGAAGAGTC+AGG + chr2_1:25870034-25870053 Msa0202920:CDS 45.0%
AGATCAGAAGAGTCAGGTTC+AGG + chr2_1:25870040-25870059 Msa0202920:CDS 45.0%
ACAAAGTCCGAACACGACTA+AGG - chr2_1:25870227-25870246 None:intergenic 45.0%
!!! GTGGTTGTTTTCAAGTCACG+TGG - chr2_1:25870690-25870709 None:intergenic 45.0%
TGTAGCAGCAGAATGAGCAA+CGG - chr2_1:25870919-25870938 None:intergenic 45.0%
AGATGCATGCTAGACTATGG+TGG + chr2_1:25871030-25871049 Msa0202920:CDS 45.0%
GATGCATGCTAGACTATGGT+GGG + chr2_1:25871031-25871050 Msa0202920:CDS 45.0%
TGGCTTACAAAATGTGGAGG+TGG + chr2_1:25871120-25871139 Msa0202920:three_prime_UTR 45.0%
TCATATCATCTTCATGCGCG+CGG + chr2_1:25871225-25871244 Msa0202920:three_prime_UTR 45.0%
!! ATATAATTATATAAGTAATA+AGG - chr2_1:25865708-25865727 None:intergenic 5.0%
!! AAAAATAATTAAATATAGAA+AGG - chr2_1:25867704-25867723 None:intergenic 5.0%
!! AATTTATATATCATAAATTT+GGG - chr2_1:25867807-25867826 None:intergenic 5.0%
!! AAATTTATATATCATAAATT+TGG - chr2_1:25867808-25867827 None:intergenic 5.0%
GGTGGAGGAAGAGAGAACAA+TGG - chr2_1:25862754-25862773 None:intergenic 50.0%
TGTGCTTGACATTGGAGTGG+TGG - chr2_1:25862772-25862791 None:intergenic 50.0%
CCATGTGCTTGACATTGGAG+TGG - chr2_1:25862775-25862794 None:intergenic 50.0%
CCACTCCAATGTCAAGCACA+TGG + chr2_1:25862772-25862791 Msa0202920:five_prime_UTR 50.0%
AGCAGTGAGTGACTTCGGTT+AGG - chr2_1:25862978-25862997 None:intergenic 50.0%
TGCGTAGCAGTGAGTGACTT+CGG - chr2_1:25862983-25863002 None:intergenic 50.0%
GAGGGACAGGTATTTGTAGG+CGG - chr2_1:25863008-25863027 None:intergenic 50.0%
!! CTGACTCGGAGAAGTTTCGA+AGG + chr2_1:25863331-25863350 Msa0202920:CDS 50.0%
AGTTTCGAAGGACGAGGACT+TGG + chr2_1:25863343-25863362 Msa0202920:CDS 50.0%
GTTTCGAAGGACGAGGACTT+GGG + chr2_1:25863344-25863363 Msa0202920:CDS 50.0%
TTTCGAAGGACGAGGACTTG+GGG + chr2_1:25863345-25863364 Msa0202920:CDS 50.0%
CCAAACGACGAAGACGAACT+CGG - chr2_1:25863420-25863439 None:intergenic 50.0%
AGTTCGTCTTCGTCGTTTGG+TGG + chr2_1:25863420-25863439 Msa0202920:CDS 50.0%
! GAGGTGGTAACGATCTCAAG+CGG + chr2_1:25863544-25863563 Msa0202920:CDS 50.0%
ATCTCAAGCGGATACGGTTC+AGG + chr2_1:25863556-25863575 Msa0202920:CDS 50.0%
! TGGATTGGGGTAGGGATTTG+AGG + chr2_1:25865672-25865691 Msa0202920:intron 50.0%
! GGGGTAAGAAGTGTGAATGC+TGG - chr2_1:25866379-25866398 None:intergenic 50.0%
GGGCCAAGGTTAACTGTGTT+AGG + chr2_1:25866538-25866557 Msa0202920:intron 50.0%
! TTGGGTCATGTCGTTTGGTC+GGG + chr2_1:25866571-25866590 Msa0202920:intron 50.0%
TAGGTCCCTATTACCCACCT+AGG - chr2_1:25866750-25866769 None:intergenic 50.0%
TGGCCCTACATGATGACTTG+TGG + chr2_1:25867948-25867967 Msa0202920:intron 50.0%
CCCTACCATTATGTTGCTGG+TGG + chr2_1:25867977-25867996 Msa0202920:intron 50.0%
CCCACCAGCAACATAATGGT+AGG - chr2_1:25867981-25868000 None:intergenic 50.0%
ACCATTATGTTGCTGGTGGG+TGG + chr2_1:25867981-25868000 Msa0202920:intron 50.0%
! CCATTATGTTGCTGGTGGGT+GGG + chr2_1:25867982-25868001 Msa0202920:intron 50.0%
TGTGGTTGCAGTCACAACTG+CGG + chr2_1:25868502-25868521 Msa0202920:intron 50.0%
ATCTTGCTGGAGTTGGAAGC+GGG - chr2_1:25869007-25869026 None:intergenic 50.0%
GATCTTGCTGGAGTTGGAAG+CGG - chr2_1:25869008-25869027 None:intergenic 50.0%
GCTTCCAACTCCAGCAAGAT+CGG + chr2_1:25869007-25869026 Msa0202920:CDS 50.0%
TCTTCCGATCTTGCTGGAGT+TGG - chr2_1:25869014-25869033 None:intergenic 50.0%
ATGCAGATGCATAGGTACGG+TGG + chr2_1:25869064-25869083 Msa0202920:intron 50.0%
! TCTCACTTGTTAGGGCGAGT+AGG + chr2_1:25869418-25869437 Msa0202920:intron 50.0%
! CTCACTTGTTAGGGCGAGTA+GGG + chr2_1:25869419-25869438 Msa0202920:intron 50.0%
GATAGTTGCTCCTTGGTCAG+TGG - chr2_1:25869703-25869722 None:intergenic 50.0%
CCATTCCCATTCCTGTTGGT+CGG - chr2_1:25869738-25869757 None:intergenic 50.0%
CGACCAACAGGAATGGGAAT+GGG + chr2_1:25869736-25869755 Msa0202920:CDS 50.0%
GACCAACAGGAATGGGAATG+GGG + chr2_1:25869737-25869756 Msa0202920:CDS 50.0%
TACCCCATTCCCATTCCTGT+TGG - chr2_1:25869742-25869761 None:intergenic 50.0%
TCTAGAGAAGCTGATCGCTC+TGG + chr2_1:25869913-25869932 Msa0202920:CDS 50.0%
GATGAGCAATGCTAGCGATC+CGG + chr2_1:25869945-25869964 Msa0202920:CDS 50.0%
CTAGCGATCCGGATAGTGAA+TGG + chr2_1:25869956-25869975 Msa0202920:CDS 50.0%
!! TCCGGATAGTGAATGGGTTG+AGG + chr2_1:25869963-25869982 Msa0202920:CDS 50.0%
! TGGGTTGAGGAAGATGAACC+TGG + chr2_1:25869976-25869995 Msa0202920:CDS 50.0%
GGGAGATGCATGCTAGACTA+TGG + chr2_1:25871027-25871046 Msa0202920:CDS 50.0%
GAGGTGCAAGTAGCACCATT+TGG - chr2_1:25871191-25871210 None:intergenic 50.0%
GCTTGACATTGGAGTGGTGG+AGG - chr2_1:25862769-25862788 None:intergenic 55.0%
CGGAGAAGTTTCGAAGGACG+AGG + chr2_1:25863337-25863356 Msa0202920:CDS 55.0%
TTCGAAGGACGAGGACTTGG+GGG + chr2_1:25863346-25863365 Msa0202920:CDS 55.0%
CCGAGTTCGTCTTCGTCGTT+TGG + chr2_1:25863417-25863436 Msa0202920:CDS 55.0%
! TCGTCTTCGTCGTTTGGTGG+AGG + chr2_1:25863423-25863442 Msa0202920:CDS 55.0%
! TCGTCGTTTGGTGGAGGAAG+TGG + chr2_1:25863429-25863448 Msa0202920:CDS 55.0%
! CGTCGTTTGGTGGAGGAAGT+GGG + chr2_1:25863430-25863449 Msa0202920:CDS 55.0%
CGGATACGGTTCAGGTACGT+CGG + chr2_1:25863564-25863583 Msa0202920:intron 55.0%
!! GGTTCAGGTACGTCGGTTTC+TGG + chr2_1:25863571-25863590 Msa0202920:intron 55.0%
! GGGCCCCACAAAACCCTTTT+AGG - chr2_1:25866415-25866434 None:intergenic 55.0%
! TGGGTCATGTCGTTTGGTCG+GGG + chr2_1:25866572-25866591 Msa0202920:intron 55.0%
CCCACCCACCAGCAACATAA+TGG - chr2_1:25867985-25868004 None:intergenic 55.0%
TCCAGCAAGATCGGAAGACG+AGG + chr2_1:25869016-25869035 Msa0202920:CDS 55.0%
ACCTCGTCTTCCGATCTTGC+TGG - chr2_1:25869020-25869039 None:intergenic 55.0%
!! TGGTCAGTGGTGGTGTCACT+GGG - chr2_1:25869690-25869709 None:intergenic 55.0%
!! TTGGTCAGTGGTGGTGTCAC+TGG - chr2_1:25869691-25869710 None:intergenic 55.0%
AGTGACACCACCACTGACCA+AGG + chr2_1:25869690-25869709 Msa0202920:CDS 55.0%
AGTTGCTCCTTGGTCAGTGG+TGG - chr2_1:25869700-25869719 None:intergenic 55.0%
CCGACCAACAGGAATGGGAA+TGG + chr2_1:25869735-25869754 Msa0202920:CDS 55.0%
ACCATCAGGTCTATGCCAGG+CGG + chr2_1:25870009-25870028 Msa0202920:CDS 55.0%
GTCTATGCCAGGCGGCAAAA+GGG + chr2_1:25870017-25870036 Msa0202920:CDS 55.0%
CGTGTGATTGTGTCAGCGCA+TGG + chr2_1:25870310-25870329 Msa0202920:intron 55.0%
!! AGGCGGGTTGCAGGAGTACA+CGG - chr2_1:25863282-25863301 None:intergenic 60.0%
!! CTGACTCGGAGCCACCGTTT+CGG - chr2_1:25863305-25863324 None:intergenic 60.0%
AAGGACGAGGACTTGGGGGA+AGG + chr2_1:25863350-25863369 Msa0202920:CDS 60.0%
GAGGACTTGGGGGAAGGAGA+TGG + chr2_1:25863356-25863375 Msa0202920:CDS 60.0%
GGGGGAAGGAGATGGAAGCT+AGG + chr2_1:25863364-25863383 Msa0202920:CDS 60.0%
! CGTTTGGTGGAGGAAGTGGG+AGG + chr2_1:25863433-25863452 Msa0202920:CDS 60.0%
TGGAGGAAGTGGGAGGAGAG+TGG + chr2_1:25863440-25863459 Msa0202920:CDS 60.0%
AGGAAGTGGGAGGAGAGTGG+TGG + chr2_1:25863443-25863462 Msa0202920:CDS 60.0%
! GAGGAGAGTGGTGGTGCTTG+AGG + chr2_1:25863452-25863471 Msa0202920:CDS 60.0%
! GAGAGTGGTGGTGCTTGAGG+AGG + chr2_1:25863455-25863474 Msa0202920:CDS 60.0%
! AGTGGTGGTGCTTGAGGAGG+AGG + chr2_1:25863458-25863477 Msa0202920:CDS 60.0%
GTGGTGCTTGAGGAGGAGGA+GGG + chr2_1:25863462-25863481 Msa0202920:CDS 60.0%
CAAGGAGTGGGTGGCACAAG+TGG + chr2_1:25863485-25863504 Msa0202920:CDS 60.0%
! GGGTCATGTCGTTTGGTCGG+GGG + chr2_1:25866573-25866592 Msa0202920:intron 60.0%
TTGGAAGCGGGAAGGCTTGG+CGG - chr2_1:25868995-25869014 None:intergenic 60.0%
GAGTTGGAAGCGGGAAGGCT+TGG - chr2_1:25868998-25869017 None:intergenic 60.0%
TGCTGGAGTTGGAAGCGGGA+AGG - chr2_1:25869003-25869022 None:intergenic 60.0%
GGTCTATGCCAGGCGGCAAA+AGG + chr2_1:25870016-25870035 Msa0202920:CDS 60.0%
! CTGATCTCCCTTTTGCCGCC+TGG - chr2_1:25870027-25870046 None:intergenic 60.0%
CCTGCAACCCGCCTCCGAAA+CGG + chr2_1:25863288-25863307 Msa0202920:CDS 65.0%
ACTCGGAGCCACCGTTTCGG+AGG - chr2_1:25863302-25863321 None:intergenic 65.0%
GGTGGTGCTTGAGGAGGAGG+AGG + chr2_1:25863461-25863480 Msa0202920:CDS 65.0%
GCTTGAGGAGGAGGAGGGCA+AGG + chr2_1:25863467-25863486 Msa0202920:CDS 65.0%
AGGAGGAGGAGGGCAAGGAG+TGG + chr2_1:25863472-25863491 Msa0202920:CDS 65.0%
GGAGGAGGAGGGCAAGGAGT+GGG + chr2_1:25863473-25863492 Msa0202920:CDS 65.0%
TGGGTGGCACAAGTGGAGCC+TGG + chr2_1:25863492-25863511 Msa0202920:CDS 65.0%
GCCGCCTGGCATAGACCTGA+TGG - chr2_1:25870013-25870032 None:intergenic 65.0%
!! CCGTTTCGGAGGCGGGTTGC+AGG - chr2_1:25863291-25863310 None:intergenic 70.0%
GCAACCCGCCTCCGAAACGG+TGG + chr2_1:25863291-25863310 Msa0202920:CDS 70.0%
GGAGCCACCGTTTCGGAGGC+GGG - chr2_1:25863298-25863317 None:intergenic 70.0%
CGGAGCCACCGTTTCGGAGG+CGG - chr2_1:25863299-25863318 None:intergenic 70.0%
GGAGGAGGGCAAGGAGTGGG+TGG + chr2_1:25863476-25863495 Msa0202920:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 25862667 25871516 25862667 ID=Msa0202920;Name=Msa0202920
chr2_1 mRNA 25862667 25871516 25862667 ID=Msa0202920-mRNA-1;Parent=Msa0202920;Name=Msa0202920-mRNA-1;_AED=0.06;_eAED=0.06;_QI=308|0.6|0.83|0.83|0.8|0.66|6|425|412
chr2_1 exon 25862667 25862793 25862667 ID=Msa0202920-mRNA-1:exon:9789;Parent=Msa0202920-mRNA-1
chr2_1 exon 25862960 25863577 25862960 ID=Msa0202920-mRNA-1:exon:9790;Parent=Msa0202920-mRNA-1
chr2_1 exon 25866345 25866527 25866345 ID=Msa0202920-mRNA-1:exon:9791;Parent=Msa0202920-mRNA-1
chr2_1 exon 25868902 25869037 25868902 ID=Msa0202920-mRNA-1:exon:9792;Parent=Msa0202920-mRNA-1
chr2_1 exon 25869658 25870061 25869658 ID=Msa0202920-mRNA-1:exon:9793;Parent=Msa0202920-mRNA-1
chr2_1 exon 25871013 25871516 25871013 ID=Msa0202920-mRNA-1:exon:9794;Parent=Msa0202920-mRNA-1
chr2_1 five_prime_UTR 25862667 25862793 25862667 ID=Msa0202920-mRNA-1:five_prime_utr;Parent=Msa0202920-mRNA-1
chr2_1 five_prime_UTR 25862960 25863140 25862960 ID=Msa0202920-mRNA-1:five_prime_utr;Parent=Msa0202920-mRNA-1
chr2_1 CDS 25863141 25863577 25863141 ID=Msa0202920-mRNA-1:cds;Parent=Msa0202920-mRNA-1
chr2_1 CDS 25866345 25866527 25866345 ID=Msa0202920-mRNA-1:cds;Parent=Msa0202920-mRNA-1
chr2_1 CDS 25868902 25869037 25868902 ID=Msa0202920-mRNA-1:cds;Parent=Msa0202920-mRNA-1
chr2_1 CDS 25869658 25870061 25869658 ID=Msa0202920-mRNA-1:cds;Parent=Msa0202920-mRNA-1
chr2_1 CDS 25871013 25871091 25871013 ID=Msa0202920-mRNA-1:cds;Parent=Msa0202920-mRNA-1
chr2_1 three_prime_UTR 25871092 25871516 25871092 ID=Msa0202920-mRNA-1:three_prime_utr;Parent=Msa0202920-mRNA-1
Gene Sequence

>Msa0202920

ATGCTTACATGCATAGCACGTCCAAAGAAACTCGAAGAAGATTCAGAATCAAACAACAATGCAAAGAGCGTAAAATCATTGACATGTCAGATAAAAGACATGGCATTGAAAGCTTCAGGTGTATACAAAAGCTGTAATCCGTGTACTCCTGCAACCCGCCTCCGAAACGGTGGCTCCGAGTCAGAAGTTTCTGACTCGGAGAAGTTTCGAAGGACGAGGACTTGGGGGAAGGAGATGGAAGCTAGGTTAAAGGGGATATCAAGTGGAGAAGGGACACCGAGTTCGTCTTCGTCGTTTGGTGGAGGAAGTGGGAGGAGAGTGGTGGTGCTTGAGGAGGAGGAGGGCAAGGAGTGGGTGGCACAAGTGGAGCCTGGTGTTTTGATTACTTTTGTGTCTCTTCCAAGAGGTGGTAACGATCTCAAGCGGATACGGTTCAGGTTGAACAAGAACCACCATTTCATACCAAAACCAGCATTCACACTTCTTACCCCAAATTATACAAGTCCTAAAAGGGTTTTGTGGGGCCCATCTCCTCTTCACCTTTGTTTGAAGTTTCACCACGCCTTTGCTAAAAGCAATCCCAAAAGTGTTCCTAAAGAAAAATTTATTCTGGCTCCAAATCGCGATATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGATAAGGTCATGGAGCTTTACAATGTTCAAAGGCTTAACCGCCAAGCCTTCCCGCTTCCAACTCCAGCAAGATCGGAAGACGAGAGTTCAAAGCGTGAATCAATAGCAGACAGCCCAGTGACACCACCACTGACCAAGGAGCAACTATCACGCAATTTATTCCGACCAACAGGAATGGGAATGGGGTACTCGTCCTCAGATTCCTATGATCAACACTCAATGCAGTCCAAACATTATCAGTATGACTTAAGTGGTATGAACTCAACCCCAAAGGTTTCAACCATTAGTGCCGCTAAGACAGATATATCATCAGTAGCTGCTTCTATAAGAAGTAGCTCTTCTAGAGAAGCTGATCGCTCTGGTGATTTATCGATGAGCAATGCTAGCGATCCGGATAGTGAATGGGTTGAGGAAGATGAACCTGGTGTTTATATTACCATCAGGTCTATGCCAGGCGGCAAAAGGGAGATCAGAAGAGTCAGGTTCAGTCGAGAAAAATTTGGGGAGATGCATGCTAGACTATGGTGGGAAGAGAATCGCGCCAGAGTACATGCACAATACTTGTGA

Protein sequence

>Msa0202920

MLTCIARPKKLEEDSESNNNAKSVKSLTCQIKDMALKASGVYKSCNPCTPATRLRNGGSESEVSDSEKFRRTRTWGKEMEARLKGISSGEGTPSSSSSFGGGSGRRVVVLEEEEGKEWVAQVEPGVLITFVSLPRGGNDLKRIRFRLNKNHHFIPKPAFTLLTPNYTSPKRVLWGPSPLHLCLKFHHAFAKSNPKSVPKEKFILAPNRDIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPARSEDESSKRESIADSPVTPPLTKEQLSRNLFRPTGMGMGYSSSDSYDQHSMQSKHYQYDLSGMNSTPKVSTISAAKTDISSVAASIRSSSSREADRSGDLSMSNASDPDSEWVEEDEPGVYITIRSMPGGKREIRRVRFSREKFGEMHARLWWEENRARVHAQYL*