AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0203550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203550 MtrunA17_Chr2g0301251 84.538 692 80 8 37 707 1 686 0.0 1144
Msa0203550 MtrunA17_Chr4g0070181 85.542 498 55 6 37 523 1 492 0.0 866
Msa0203550 MtrunA17_Chr8g0389081 61.996 571 168 14 51 588 21 575 0.0 586
Msa0203550 MtrunA17_Chr2g0285461 60.707 481 164 12 50 521 14 478 0.0 541
Msa0203550 MtrunA17_Chr8g0376771 57.996 519 187 14 37 543 1 500 2.10e-178 534
Msa0203550 MtrunA17_Chr5g0433301 58.750 480 169 12 37 500 1 467 7.62e-176 525
Msa0203550 MtrunA17_Chr1g0156321 68.097 373 111 5 51 419 35 403 3.00e-174 522
Msa0203550 MtrunA17_Chr3g0109391 52.827 566 206 15 53 586 20 556 4.10e-173 519
Msa0203550 MtrunA17_Chr8g0385791 50.000 388 192 2 30 416 30 416 6.21e-128 401
Msa0203550 MtrunA17_Chr2g0276781 53.982 339 151 4 59 395 23 358 4.50e-120 375
Msa0203550 MtrunA17_Chr2g0282961 50.729 343 153 2 59 392 53 388 1.77e-110 348
Msa0203550 MtrunA17_Chr8g0346711 51.622 339 155 7 59 394 29 361 1.62e-109 348
Msa0203550 MtrunA17_Chr4g0046371 49.856 347 154 4 59 392 38 377 1.44e-108 346
Msa0203550 MtrunA17_Chr2g0326281 49.441 358 156 5 59 392 56 412 1.37e-107 347
Msa0203550 MtrunA17_Chr4g0009751 50.585 342 161 5 57 395 17 353 8.01e-107 339
Msa0203550 MtrunA17_Chr4g0029671 48.986 345 164 4 59 392 54 397 3.96e-104 337
Msa0203550 MtrunA17_Chr7g0239061 45.676 370 187 9 51 412 6 369 8.27e-99 320
Msa0203550 MtrunA17_Chr2g0326761 39.312 407 199 8 54 418 6 406 3.40e-86 287
Msa0203550 MtrunA17_Chr1g0199681 39.506 405 190 11 54 413 89 483 7.64e-84 280
Msa0203550 MtrunA17_Chr4g0028971 38.756 418 200 6 50 418 3 413 1.18e-83 280
Msa0203550 MtrunA17_Chr1g0181211 37.438 406 204 5 48 408 16 416 2.62e-80 271
Msa0203550 MtrunA17_Chr7g0264171 35.934 423 202 10 54 418 26 437 3.18e-75 255
Msa0203550 MtrunA17_Chr3g0115271 36.267 375 192 6 55 391 15 380 1.06e-68 237
Msa0203550 MtrunA17_Chr7g0264161 40.129 309 172 5 68 371 1 301 1.73e-67 225
Msa0203550 MtrunA17_Chr5g0424931 34.417 369 196 9 54 391 14 367 3.11e-61 215
Msa0203550 MtrunA17_Chr5g0436761 37.069 348 195 9 52 391 5 336 3.45e-60 210
Msa0203550 MtrunA17_Chr5g0417281 35.180 361 200 8 52 401 4 341 2.23e-58 207
Msa0203550 MtrunA17_Chr8g0356211 41.048 229 128 3 170 396 2 225 4.45e-55 192
Msa0203550 MtrunA17_Chr1g0178011 32.353 374 234 9 54 420 7 368 5.86e-53 190
Msa0203550 MtrunA17_Chr2g0289221 32.432 333 180 10 56 371 17 321 2.59e-48 174
Msa0203550 MtrunA17_Chr2g0277461 31.519 349 221 7 56 397 10 347 1.26e-47 175
Msa0203550 MtrunA17_Chr5g0417211 31.928 332 184 8 56 371 9 314 3.56e-44 164
Msa0203550 MtrunA17_Chr5g0424741 30.053 376 219 11 54 393 7 374 1.19e-42 162
Msa0203550 MtrunA17_Chr2g0277531 30.124 322 199 9 56 371 17 318 4.24e-38 144
Msa0203550 MtrunA17_Chr5g0425661 34.894 235 130 5 38 258 8 233 2.44e-35 134
Msa0203550 MtrunA17_Chr5g0424801 29.446 343 219 11 56 391 9 335 1.65e-34 135
Msa0203550 MtrunA17_Chr5g0425261 29.446 343 219 11 56 391 9 335 1.33e-33 133
Msa0203550 MtrunA17_Chr1g0156311 41.593 113 32 4 280 391 1 80 6.87e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203550 AT1G19220.1 80.658 486 84 4 37 518 1 480 0.0 801
Msa0203550 AT5G20730.2 78.351 485 97 5 37 514 1 484 0.0 770
Msa0203550 AT5G20730.3 78.189 486 97 6 37 514 1 485 0.0 765
Msa0203550 AT5G20730.1 78.189 486 97 6 37 514 1 485 0.0 765
Msa0203550 AT1G30330.1 68.090 398 121 6 37 430 1 396 0.0 543
Msa0203550 AT1G30330.3 69.531 384 111 6 51 430 17 398 1.90e-179 538
Msa0203550 AT1G30330.2 69.531 384 111 6 51 430 17 398 1.90e-179 538
Msa0203550 AT5G37020.2 59.821 448 154 11 37 466 1 440 1.39e-171 513
Msa0203550 AT5G37020.1 59.821 448 154 11 37 466 1 440 8.33e-171 512
Msa0203550 AT1G19850.2 57.456 456 169 9 51 491 34 479 5.72e-169 509
Msa0203550 AT1G19850.1 57.456 456 169 9 51 491 45 490 6.02e-169 510
Msa0203550 AT5G62000.2 50.630 397 176 5 25 411 27 413 6.90e-127 399
Msa0203550 AT5G62000.5 50.630 397 176 5 25 411 27 413 6.90e-127 399
Msa0203550 AT5G62000.3 50.630 397 176 5 25 411 27 413 6.90e-127 399
Msa0203550 AT5G62000.1 50.630 397 176 5 25 411 27 413 6.90e-127 399
Msa0203550 AT5G62000.4 50.630 397 176 5 25 411 27 413 9.68e-127 399
Msa0203550 AT5G37020.3 57.670 352 125 9 132 466 1 345 5.58e-123 385
Msa0203550 AT1G59750.4 52.342 363 164 6 59 416 22 380 8.25e-123 382
Msa0203550 AT1G59750.1 52.342 363 164 6 59 416 22 380 9.20e-123 383
Msa0203550 AT1G59750.3 52.342 363 164 6 59 416 22 380 9.20e-123 383
Msa0203550 AT1G59750.2 52.342 363 164 6 59 416 22 380 1.07e-122 382
Msa0203550 AT5G60450.2 49.865 371 174 4 50 410 32 400 3.33e-115 366
Msa0203550 AT5G60450.1 50.411 365 169 4 56 410 62 424 4.76e-114 363
Msa0203550 AT4G23980.1 49.596 371 176 8 45 412 1 363 1.16e-107 342
Msa0203550 AT4G23980.2 49.596 371 176 8 45 412 1 363 1.25e-107 342
Msa0203550 AT2G33860.1 49.709 344 155 4 59 392 54 389 2.21e-107 341
Msa0203550 AT2G46530.1 49.288 351 168 7 56 403 18 361 4.67e-107 340
Msa0203550 AT2G46530.3 47.838 370 180 8 37 403 23 382 5.22e-107 340
Msa0203550 AT3G61830.1 46.832 363 186 5 42 402 8 365 4.64e-105 334
Msa0203550 AT1G34410.1 43.429 350 191 3 45 394 13 355 2.51e-94 306
Msa0203550 AT1G35540.1 43.860 342 185 3 50 391 18 352 7.47e-93 302
Msa0203550 AT1G35240.1 42.286 350 195 3 50 399 18 360 8.14e-92 299
Msa0203550 AT1G34310.1 43.567 342 186 3 50 391 18 352 3.16e-91 298
Msa0203550 AT3G61830.2 47.799 318 159 5 87 402 2 314 2.26e-90 294
Msa0203550 AT1G35520.1 42.286 350 195 3 59 408 27 369 2.77e-89 293
Msa0203550 AT1G34170.1 42.308 338 186 4 59 394 25 355 2.57e-87 285
Msa0203550 AT1G34390.1 42.061 359 199 4 50 408 18 367 2.98e-87 287
Msa0203550 AT2G28350.2 38.426 432 190 11 52 414 3 427 1.92e-81 274
Msa0203550 AT2G28350.1 38.426 432 190 11 52 414 3 427 3.27e-81 274
Msa0203550 AT4G30080.1 39.312 407 195 11 51 413 11 409 5.41e-81 273
Msa0203550 AT2G33860.2 53.680 231 107 0 162 392 2 232 6.68e-79 261
Msa0203550 AT2G46530.2 51.240 242 114 3 162 403 37 274 6.24e-78 260
Msa0203550 AT1G34170.2 39.645 338 169 4 59 394 25 329 9.31e-78 258
Msa0203550 AT1G34170.3 39.645 338 169 4 59 394 25 329 8.28e-77 258
Msa0203550 AT1G77850.1 32.701 422 224 9 46 422 6 412 1.14e-64 226
Msa0203550 AT1G77850.2 32.701 422 224 9 46 422 6 412 1.55e-64 226
Msa0203550 AT1G43950.1 38.559 236 126 4 26 261 6 222 2.59e-45 162

Find 164 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATAGACCTCGTCGGTTTC+AGG 0.138329 2_1:+27481029 None:intergenic
GGCTGACCTACTTTATTTAC+AGG 0.209741 2_1:+27480990 None:intergenic
GCCCAAGTAGAGTTTCAATT+TGG 0.221186 2_1:-27479369 Msa0203550:CDS
CTCTTGCTACCTGGCATTCC+TGG 0.226169 2_1:+27479274 None:intergenic
CGAGCTGTTGGGGCTGATGC+TGG 0.233357 2_1:+27477999 None:intergenic
AATGGTTACTTGGCTAATTC+TGG 0.236946 2_1:-27482622 Msa0203550:CDS
TTGACTTGGTTCGGTAAATT+AGG 0.237724 2_1:+27478757 None:intergenic
AGCAGCAGCAACAGCAGCAG+AGG 0.281333 2_1:-27478651 Msa0203550:CDS
GGATTATAAAATATAGTAAA+TGG 0.283378 2_1:+27480130 None:intergenic
TTCCGGAGTACGCAGATATA+TGG 0.289339 2_1:-27479904 Msa0203550:CDS
GTTGTTGGTCTATTTGTTGC+TGG 0.306488 2_1:+27478329 None:intergenic
TTCACAATGGCGCAATCTTC+AGG 0.308095 2_1:-27479835 Msa0203550:intron
GCAGCAGAGGCAACAGCAGC+TGG 0.320179 2_1:-27478638 Msa0203550:CDS
TGAAGCTGAGAGTAGTTTAC+TGG 0.339497 2_1:+27478451 None:intergenic
GTAGTCAATAGATGCCTCTT+TGG 0.344745 2_1:+27480439 None:intergenic
CTGGCATTCCTGGTTGCTTC+GGG 0.345256 2_1:+27479284 None:intergenic
AGATATATGGGCACAATCAC+TGG 0.346786 2_1:-27479891 Msa0203550:CDS
CCTGGCATTCCTGGTTGCTT+CGG 0.347377 2_1:+27479283 None:intergenic
TTCCAATCAGCTGGCAAGAA+TGG 0.350300 2_1:-27478388 Msa0203550:CDS
GAAAAGCAGCAACTTCTCTT+AGG 0.350585 2_1:-27480265 Msa0203550:CDS
TGCGTTGTTTCCGAGCTGTT+GGG 0.359910 2_1:+27477988 None:intergenic
ATGCCATAACTCTGAATTGA+TGG 0.385489 2_1:+27481958 None:intergenic
GGAGGTGGACAAATGTAAAA+AGG 0.387268 2_1:+27479325 None:intergenic
ATGTTTGAGACAGAGGATTC+CGG 0.387547 2_1:-27479921 Msa0203550:CDS
ATCCATTCTTGCCAGCTGAT+TGG 0.390417 2_1:+27478386 None:intergenic
GTGTCTTCGTTAGCACAAAA+AGG 0.391171 2_1:-27480408 Msa0203550:CDS
ATCAACTTGGATGGAAGGTT+AGG 0.397065 2_1:+27481736 None:intergenic
GGATTGGAAGTTCAGTATCT+TGG 0.399996 2_1:+27478819 None:intergenic
CCCAAGTAGAGTTTCAATTT+GGG 0.407264 2_1:-27479368 Msa0203550:CDS
CTTGGAGCAGAGAGCGAAGC+AGG 0.410718 2_1:+27478796 None:intergenic
TGGGGCTGATGCTGGGACAT+AGG 0.410824 2_1:+27478007 None:intergenic
GGCTCCTTCTAATGGTTACT+TGG 0.410885 2_1:-27482632 Msa0203550:CDS
TGTAGTGTCATGCAAATCTT+TGG 0.422175 2_1:+27480580 None:intergenic
CTACTTTATTTACAGGTTGA+AGG 0.422462 2_1:+27480997 None:intergenic
TAGTGCTGGTTGCTGTCTAC+TGG 0.423013 2_1:+27480231 None:intergenic
TGCTGCTGCAGCTGGTTTAA+CGG 0.424844 2_1:+27478670 None:intergenic
CTCAATGCAACCGCCAGCTC+AGG 0.427329 2_1:-27480612 Msa0203550:CDS
CAGAGAGCGAAGCAGGGGAT+TGG 0.429256 2_1:+27478803 None:intergenic
GAGCTGTTGGGGCTGATGCT+GGG 0.429491 2_1:+27478000 None:intergenic
GAGTTATGGCATGCTTGTGC+CGG 0.430189 2_1:-27481947 Msa0203550:CDS
AAAAGAATTCTGAGGGTTGT+TGG 0.430251 2_1:+27480812 None:intergenic
TGCAATTGATTGACTTGGTT+CGG 0.430644 2_1:+27478748 None:intergenic
AACTAAAACAAGTGAAACTA+AGG 0.430778 2_1:+27482980 None:intergenic
ACTATGAATAACGGCACAAT+TGG 0.434617 2_1:-27478508 Msa0203550:intron
TTAGCCAAGTAACCATTAGA+AGG 0.437895 2_1:+27482628 None:intergenic
TAGGCTGCTGAGGTAATTGC+TGG 0.438681 2_1:+27478026 None:intergenic
GTTGCTGAGACCACGAGGCC+GGG 0.440637 2_1:+27478719 None:intergenic
TCCCAAATTGAAACTCTACT+TGG 0.450964 2_1:+27479367 None:intergenic
TTGCTGAGACCACGAGGCCG+GGG 0.452553 2_1:+27478720 None:intergenic
GTAAGAGACCGGCTTGTTGT+TGG 0.452906 2_1:+27478314 None:intergenic
CAGAGGCAACAGCAGCTGGC+TGG 0.453385 2_1:-27478634 Msa0203550:CDS
GCATGCTTGTGCCGGGCCAT+TGG 0.453483 2_1:-27481939 Msa0203550:CDS
CATAGACCTCGTCGGTTTCA+GGG 0.457502 2_1:+27481030 None:intergenic
GGTTTATTAAATTGAAGACT+TGG 0.458050 2_1:+27478778 None:intergenic
CTGTACACTCATGTTTCCCT+TGG 0.458809 2_1:-27479960 Msa0203550:CDS
ACCTCAAGTTCAATCTTCCC+TGG 0.462305 2_1:-27478982 Msa0203550:intron
TGTTGCTGAGACCACGAGGC+CGG 0.463799 2_1:+27478718 None:intergenic
ATGCGTTGTTTCCGAGCTGT+TGG 0.464290 2_1:+27477987 None:intergenic
GGTTGCTGTACACACTGATT+CGG 0.468390 2_1:+27478472 None:intergenic
GGCTGTTGCTGCTGTGGCTG+CGG 0.471422 2_1:+27478598 None:intergenic
AGACCATCAATTCAGAGTTA+TGG 0.474003 2_1:-27481961 Msa0203550:CDS
ATAATGAAGGCTCCTTCTAA+TGG 0.474217 2_1:-27482640 Msa0203550:CDS
TTGGCAACTATTTCCTGAGC+TGG 0.481645 2_1:+27480599 None:intergenic
CAGAATGATGTTTGAGACAG+AGG 0.483025 2_1:-27479928 Msa0203550:CDS
TCCGGAGTACGCAGATATAT+GGG 0.483649 2_1:-27479903 Msa0203550:CDS
CGGAAACAACGCATTCTCAA+TGG 0.486956 2_1:-27477978 Msa0203550:CDS
GGTTGCAGCATCTATGCAAA+AGG 0.492031 2_1:-27481782 Msa0203550:CDS
CAACAAAATTTCCAATCAGC+TGG 0.492895 2_1:-27478397 Msa0203550:CDS
AGTTATGGCATGCTTGTGCC+GGG 0.497967 2_1:-27481946 Msa0203550:CDS
AAGATTTGCATGACACTACA+TGG 0.497978 2_1:-27480577 Msa0203550:CDS
CAATGGAATCACAAATTCAC+AGG 0.501830 2_1:+27480001 None:intergenic
CCTGGTTGCTTCGGGAACTT+CGG 0.502765 2_1:+27479292 None:intergenic
AGTTGAGGCTGTTGCTGCTG+TGG 0.504885 2_1:+27478592 None:intergenic
GATGGAAGGTTAGGGTAACT+TGG 0.505429 2_1:+27481745 None:intergenic
TCAAGTGACAGCATGCATAT+CGG 0.505728 2_1:-27480193 Msa0203550:CDS
AGCTGCTGTGGATGCATAAG+AGG 0.510218 2_1:+27477923 None:intergenic
CTGGTTTGAGTTTAGTACAA+TGG 0.510429 2_1:-27478963 Msa0203550:intron
TGGTGTTGTTGCTGCTGTTG+AGG 0.510554 2_1:+27478547 None:intergenic
TACTTTATTTACAGGTTGAA+GGG 0.510836 2_1:+27480998 None:intergenic
TGCTGCTGTTGAGGCTGCTG+CGG 0.511253 2_1:+27478556 None:intergenic
CCGAAGCAACCAGGAATGCC+AGG 0.511694 2_1:-27479283 Msa0203550:intron
GCAACAAAGCATGTTGCAAA+GGG 0.513153 2_1:-27478242 Msa0203550:CDS
AAGAGGCATCTATTGACTAC+TGG 0.515402 2_1:-27480436 Msa0203550:CDS
CTGTGAATTTGTGATTCCAT+TGG 0.515757 2_1:-27480000 Msa0203550:CDS
TAAACAACAAGGCTTCCAAC+AGG 0.516685 2_1:+27481905 None:intergenic
AAGAGAGCTATGCCATGGCT+TGG 0.516884 2_1:-27479027 Msa0203550:CDS
TGCAACAAAGCATGTTGCAA+AGG 0.522595 2_1:-27478243 Msa0203550:CDS
CAAAATACGACTATGAATAA+CGG 0.528735 2_1:-27478517 Msa0203550:CDS
TGAGAAAATATTCCCACCTC+TGG 0.530081 2_1:-27480725 Msa0203550:intron
CTTCAGCAACAGTTACTCTC+AGG 0.532871 2_1:-27478433 Msa0203550:CDS
TCAACTTGGATGGAAGGTTA+GGG 0.535046 2_1:+27481737 None:intergenic
TACTTGGCTAATTCTGGTGA+AGG 0.539140 2_1:-27482616 Msa0203550:intron
AATCACTGGGATCAGTGACT+TGG 0.541031 2_1:-27479877 Msa0203550:CDS
GTGACTTGGATCCTGTCCGC+TGG 0.543304 2_1:-27479863 Msa0203550:CDS
CTTGTTGTTTACTTTCCTCA+AGG 0.543973 2_1:-27481893 Msa0203550:CDS
GGCATCTATTGACTACTGGT+TGG 0.544572 2_1:-27480432 Msa0203550:CDS
GCTTTGTTATACTTTGCCAA+TGG 0.549063 2_1:+27479984 None:intergenic
TTGGTTTCTATACCGCCTGT+TGG 0.549931 2_1:-27481920 Msa0203550:CDS
ACCAGGGAAGATTGAACTTG+AGG 0.550724 2_1:+27478981 None:intergenic
CTGCTGCCGCTGTAAGAGAC+CGG 0.552170 2_1:+27478303 None:intergenic
CGGTATAGAAACCAATGGCC+CGG 0.553349 2_1:+27481928 None:intergenic
TCATTCTGAATCTCATTCCA+AGG 0.553851 2_1:+27479943 None:intergenic
GCATTTGACGAAAGCATGGA+TGG 0.554720 2_1:+27478874 None:intergenic
GAATATTGAAGAAGATTCAG+AGG 0.556859 2_1:-27482923 Msa0203550:intron
GGAAGTTCAGTATCTTGGAC+GGG 0.557307 2_1:+27478824 None:intergenic
CCGAAGTTCCCGAAGCAACC+AGG 0.557513 2_1:-27479292 Msa0203550:CDS
TGCTGAGACCACGAGGCCGG+GGG 0.559962 2_1:+27478721 None:intergenic
TACAGATCAACTTGGATGGA+AGG 0.560163 2_1:+27481731 None:intergenic
TGGAGATGAACTCGGCATGA+AGG 0.577241 2_1:-27479007 Msa0203550:CDS
CCATGGCTTGGAGATGAACT+CGG 0.577481 2_1:-27479015 Msa0203550:CDS
TTGGAGCAGAGAGCGAAGCA+GGG 0.581087 2_1:+27478797 None:intergenic
TGGAAGTTCAGTATCTTGGA+CGG 0.583037 2_1:+27478823 None:intergenic
GATATATGGGCACAATCACT+GGG 0.584373 2_1:-27479890 Msa0203550:CDS
CATTGCATTTGACGAAAGCA+TGG 0.585079 2_1:+27478870 None:intergenic
GCCCATATATCTGCGTACTC+CGG 0.585394 2_1:+27479902 None:intergenic
CAGCATCAGCCCCAACAGCT+CGG 0.585593 2_1:-27477998 Msa0203550:CDS
GGATGGGACGAATCAACAGC+TGG 0.587049 2_1:-27479397 Msa0203550:CDS
CCCAAATTGAAACTCTACTT+GGG 0.589480 2_1:+27479368 None:intergenic
TGGAGCAGAGAGCGAAGCAG+GGG 0.591324 2_1:+27478798 None:intergenic
GCAACCAGCACTATCTTCAT+CGG 0.591547 2_1:-27480221 Msa0203550:CDS
TGAGACATTTGTGATTGTTG+TGG 0.594598 2_1:+27478217 None:intergenic
TGGACGGGTCATCAGTGCTA+AGG 0.595904 2_1:+27478839 None:intergenic
GTGAAGCATACAGATCAACT+TGG 0.597140 2_1:+27481723 None:intergenic
CAAATAGACCAACAACAAGC+CGG 0.598741 2_1:-27478322 Msa0203550:CDS
AGCATACAGATCAACTTGGA+TGG 0.599868 2_1:+27481727 None:intergenic
GCAATGCTAGCTTCAGACAT+GGG 0.600147 2_1:-27480847 Msa0203550:CDS
TGATGCATACACACCAGAGG+TGG 0.601875 2_1:+27480712 None:intergenic
GCGTTGTTTCCGAGCTGTTG+GGG 0.602711 2_1:+27477989 None:intergenic
GAATTGCGAGTCTTGTGGTA+AGG 0.603601 2_1:+27478351 None:intergenic
CTGTACCTATAACAGGTGAA+AGG 0.605268 2_1:-27481985 Msa0203550:intron
GCTAGTGACACTAGCACTCA+CGG 0.605559 2_1:-27480775 Msa0203550:CDS
CCGAGTTCATCTCCAAGCCA+TGG 0.605934 2_1:+27479015 None:intergenic
CATTCTGAATCTCATTCCAA+GGG 0.607976 2_1:+27479944 None:intergenic
CTTTCGTCAAATGCAATGCA+TGG 0.609029 2_1:-27478865 Msa0203550:CDS
TGCTGGAATTGCGAGTCTTG+TGG 0.609397 2_1:+27478346 None:intergenic
GGTAATTGCTGGCTTTGTTG+CGG 0.609885 2_1:+27478037 None:intergenic
TGCTGGGACATAGGCTGCTG+AGG 0.611888 2_1:+27478016 None:intergenic
ACTTGTTCACTATGTCCTTG+AGG 0.614169 2_1:+27481878 None:intergenic
ACAACTGCAACTGTTGCTGT+TGG 0.616365 2_1:+27478170 None:intergenic
AACAAGCCGGTCTCTTACAG+CGG 0.618906 2_1:-27478309 Msa0203550:CDS
GGATTCTGTTGAGTCAGTTG+AGG 0.619877 2_1:+27478577 None:intergenic
GCAACTATTTCCTGAGCTGG+CGG 0.621994 2_1:+27480602 None:intergenic
AGCAATGCTAGCTTCAGACA+TGG 0.631076 2_1:-27480848 Msa0203550:CDS
TATCGGCATTCTTGCTGCTG+CGG 0.637519 2_1:-27480176 Msa0203550:CDS
CATTCAAGAGAGCTATGCCA+TGG 0.640043 2_1:-27479032 Msa0203550:CDS
CGGTCACAGGACAACCAAAG+AGG 0.645259 2_1:-27480453 Msa0203550:intron
ATTACCGATGAAGATAGTGC+TGG 0.645702 2_1:+27480217 None:intergenic
TGCAGCATCTATGCAAAAGG+AGG 0.646903 2_1:-27481779 Msa0203550:CDS
CTTTCTCCTACAGTATGACA+AGG 0.647300 2_1:-27480872 Msa0203550:intron
CTGCTGTTGCTGAGACCACG+AGG 0.654981 2_1:+27478714 None:intergenic
GAAAAGTGGACCTACATGCA+GGG 0.656104 2_1:+27481693 None:intergenic
CATCTGTGCATAGACCTCGT+CGG 0.663742 2_1:+27481022 None:intergenic
GATGCATACACACCAGAGGT+GGG 0.666086 2_1:+27480713 None:intergenic
ACTAAAACAAGTGAAACTAA+GGG 0.667011 2_1:+27482981 None:intergenic
ACATTTAGACATATTTATCG+CGG 0.673187 2_1:-27480554 Msa0203550:intron
TAAAAGCCCTGATTGAGCAG+CGG 0.680480 2_1:+27478900 None:intergenic
AATGGAATCACAAATTCACA+GGG 0.688736 2_1:+27480002 None:intergenic
ACAGGCGGTATAGAAACCAA+TGG 0.690042 2_1:+27481923 None:intergenic
TTTGACGAAAGCATGGATGG+AGG 0.692176 2_1:+27478877 None:intergenic
CTTGAGGAAAGTAAACAACA+AGG 0.693762 2_1:+27481894 None:intergenic
GGCTGACCCTGAAACCGACG+AGG 0.693943 2_1:-27481036 Msa0203550:CDS
ACAACAAGGCTTCCAACAGG+CGG 0.694325 2_1:+27481908 None:intergenic
ATGGAATCACAAATTCACAG+GGG 0.801265 2_1:+27480003 None:intergenic
AGTGACACTAGCACTCACGG+TGG 0.850873 2_1:-27480772 Msa0203550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATATTCTTATTTATTTT+TGG - chr2_1:27480229-27480248 Msa0203550:CDS 10.0%
!!! TAAGATATAAATTATTGATT+CGG + chr2_1:27480381-27480400 None:intergenic 10.0%
!!! TGTTTTTTTGAGTTTTTTTT+TGG - chr2_1:27478239-27478258 Msa0203550:CDS 15.0%
!! TCTTCTATATATTATGATAA+AGG - chr2_1:27478882-27478901 Msa0203550:CDS 15.0%
!! CTTCTATATATTATGATAAA+GGG - chr2_1:27478883-27478902 Msa0203550:CDS 15.0%
!!! TTATAAAAAGTTGAGTTTTA+CGG - chr2_1:27479245-27479264 Msa0203550:intron 15.0%
!!! AAGATATAAATTATTGATTC+GGG + chr2_1:27480380-27480399 None:intergenic 15.0%
!! GGATTATAAAATATAGTAAA+TGG + chr2_1:27481165-27481184 None:intergenic 15.0%
!!! TTACTATATTTTATAATCCA+AGG - chr2_1:27481166-27481185 Msa0203550:intron 15.0%
!! GAAAAATTTAACTAATTGAA+TGG + chr2_1:27481711-27481730 None:intergenic 15.0%
!!! GTAATGTTTTTAATTTTGAT+AGG - chr2_1:27481870-27481889 Msa0203550:intron 15.0%
!!! TCATTCATATTTTGTCTTAA+AGG - chr2_1:27478168-27478187 Msa0203550:CDS 20.0%
!!! TTTTGTCTTGTTTTTTTGTT+GGG - chr2_1:27478198-27478217 Msa0203550:CDS 20.0%
!!! AGTTTAAGATTTTGATATTG+TGG - chr2_1:27478539-27478558 Msa0203550:CDS 20.0%
!! TTCAAAAAAGGTTCAAAAAT+TGG + chr2_1:27478608-27478627 None:intergenic 20.0%
!!! AATTTTTGAACCTTTTTTGA+AGG - chr2_1:27478607-27478626 Msa0203550:CDS 20.0%
!! TAATAATGAACCTTCAAAAA+AGG + chr2_1:27478620-27478639 None:intergenic 20.0%
!! AAAAAGTGACAAAAAGATTA+GGG + chr2_1:27478916-27478935 None:intergenic 20.0%
!! TAAAAAGTGACAAAAAGATT+AGG + chr2_1:27478917-27478936 None:intergenic 20.0%
!!! AACTCAACTTTTTATAAGAT+TGG + chr2_1:27479242-27479261 None:intergenic 20.0%
!!! AAATGTGTTTTTCAAGAAAA+AGG - chr2_1:27479735-27479754 Msa0203550:intron 20.0%
!!! AATGTGTTTTTCAAGAAAAA+GGG - chr2_1:27479736-27479755 Msa0203550:intron 20.0%
!!! CTCATTACAAATTTTGTTAA+TGG - chr2_1:27479783-27479802 Msa0203550:intron 20.0%
!!! TTTTCATATAATCTATAAGC+TGG + chr2_1:27480026-27480045 None:intergenic 20.0%
!!! TTCTTATTTATTTTTGGATC+AGG - chr2_1:27480235-27480254 Msa0203550:CDS 20.0%
!!! AGATATAAATTATTGATTCG+GGG + chr2_1:27480379-27480398 None:intergenic 20.0%
!! TTATAAAATTGCATCAACAT+CGG - chr2_1:27480819-27480838 Msa0203550:CDS 20.0%
!!! TTTTTTTGTTTCATGCTTTT+AGG + chr2_1:27481532-27481551 None:intergenic 20.0%
!!! GTTAGTTTTATAGAACAAAT+TGG + chr2_1:27481573-27481592 None:intergenic 20.0%
!!! TGTTTTTAATTTTGATAGGT+TGG - chr2_1:27481874-27481893 Msa0203550:intron 20.0%
!! CCAAAAATATGAACTAATTA+GGG + chr2_1:27482049-27482068 None:intergenic 20.0%
!! ACCAAAAATATGAACTAATT+AGG + chr2_1:27482050-27482069 None:intergenic 20.0%
!! AATTATTGTCCATATAAAGA+AGG + chr2_1:27482113-27482132 None:intergenic 20.0%
! CAACAAAAAAACAAGACAAA+AGG + chr2_1:27478199-27478218 None:intergenic 25.0%
!!! CTTTTGTCTTGTTTTTTTGT+TGG - chr2_1:27478197-27478216 Msa0203550:CDS 25.0%
! ACTAAAACAAGTGAAACTAA+GGG + chr2_1:27478314-27478333 None:intergenic 25.0%
! AACTAAAACAAGTGAAACTA+AGG + chr2_1:27478315-27478334 None:intergenic 25.0%
!! AAACTTTTAGTGGCATTTTT+TGG - chr2_1:27478394-27478413 Msa0203550:CDS 25.0%
!!! AACTTTTAGTGGCATTTTTT+GGG - chr2_1:27478395-27478414 Msa0203550:CDS 25.0%
!!! TGGTTATTTTGCTATGTAAT+TGG - chr2_1:27478436-27478455 Msa0203550:CDS 25.0%
! TATGTAATTGGATAACTTTG+TGG - chr2_1:27478448-27478467 Msa0203550:CDS 25.0%
! TTTGTGGTAAGAATCAAAAA+GGG - chr2_1:27478464-27478483 Msa0203550:CDS 25.0%
!!! AGGTTCATTATTACTTTTTG+AGG - chr2_1:27478627-27478646 Msa0203550:CDS 25.0%
!!! GGTTCATTATTACTTTTTGA+GGG - chr2_1:27478628-27478647 Msa0203550:CDS 25.0%
!! TCTGAGAATGATATCTTTTA+AGG - chr2_1:27478783-27478802 Msa0203550:CDS 25.0%
! AGATCCAATAAATATGAGTA+AGG - chr2_1:27478853-27478872 Msa0203550:CDS 25.0%
! GATCCAATAAATATGAGTAA+GGG - chr2_1:27478854-27478873 Msa0203550:CDS 25.0%
! ATCCAATAAATATGAGTAAG+GGG - chr2_1:27478855-27478874 Msa0203550:CDS 25.0%
!!! TGTCACTTTTTACTCTTTTA+TGG - chr2_1:27478925-27478944 Msa0203550:CDS 25.0%
! ACATTTACACAAAGTACATT+TGG + chr2_1:27478983-27479002 None:intergenic 25.0%
! GTAAATGTGTAACAGATTTA+TGG - chr2_1:27478995-27479014 Msa0203550:CDS 25.0%
! TTGTTAAACAACAGATATTG+CGG + chr2_1:27479174-27479193 None:intergenic 25.0%
!! TTCTAACCACAATAACTTTT+AGG - chr2_1:27479489-27479508 Msa0203550:intron 25.0%
!!! ATGTGTTTTTCAAGAAAAAG+GGG - chr2_1:27479737-27479756 Msa0203550:intron 25.0%
! AAACAAATCTCTAATCATTC+AGG + chr2_1:27479898-27479917 None:intergenic 25.0%
!!! GCTGGTTTTATAAGTTAATT+TGG + chr2_1:27480008-27480027 None:intergenic 25.0%
! ATTAAGTTATTTATCCGAAC+AGG - chr2_1:27480099-27480118 Msa0203550:intron 25.0%
! TTAAGTTATTTATCCGAACA+GGG - chr2_1:27480100-27480119 Msa0203550:intron 25.0%
! AATCGCTTAATGAAAACAAA+AGG + chr2_1:27480188-27480207 None:intergenic 25.0%
!! TACTTTATTTACAGGTTGAA+GGG + chr2_1:27480297-27480316 None:intergenic 25.0%
!! TGCATCATTTTCATTTACTA+TGG - chr2_1:27480596-27480615 Msa0203550:CDS 25.0%
! ACATTTAGACATATTTATCG+CGG - chr2_1:27480738-27480757 Msa0203550:CDS 25.0%
! AACAAACGACAATATATTCA+GGG + chr2_1:27480799-27480818 None:intergenic 25.0%
! AAACAAACGACAATATATTC+AGG + chr2_1:27480800-27480819 None:intergenic 25.0%
!!! TCTTTTTTTTGACGAATCAT+CGG - chr2_1:27480953-27480972 Msa0203550:intron 25.0%
! CCTGTTAAAATGACATATAT+CGG + chr2_1:27481264-27481283 None:intergenic 25.0%
! TTTAACTAATTGAATGGTGA+CGG + chr2_1:27481705-27481724 None:intergenic 25.0%
!!! TTTAATTTTGATAGGTTGGA+TGG - chr2_1:27481878-27481897 Msa0203550:intron 25.0%
!!! TTAATTTTGATAGGTTGGAT+GGG - chr2_1:27481879-27481898 Msa0203550:intron 25.0%
! AAAATATGAACTAATTAGGG+AGG + chr2_1:27482046-27482065 None:intergenic 25.0%
!! CCCTAATTAGTTCATATTTT+TGG - chr2_1:27482046-27482065 Msa0203550:intron 25.0%
! ATATAAAGAAGGCAGATAAT+TGG + chr2_1:27482102-27482121 None:intergenic 25.0%
! AATTATCTGCCTTCTTTATA+TGG - chr2_1:27482101-27482120 Msa0203550:intron 25.0%
! GGTTTATTAAATTGAAGACT+TGG + chr2_1:27482517-27482536 None:intergenic 25.0%
!! TTATTCATAGTCGTATTTTG+AGG + chr2_1:27482775-27482794 None:intergenic 25.0%
! CAAAATACGACTATGAATAA+CGG - chr2_1:27482775-27482794 Msa0203550:intron 25.0%
TTCAGCTCATATTTCAATGT+CGG - chr2_1:27477961-27477980 Msa0203550:CDS 30.0%
AAAAAGCAGAAGCAGAAAAT+GGG + chr2_1:27478128-27478147 None:intergenic 30.0%
AAAAAAGCAGAAGCAGAAAA+TGG + chr2_1:27478129-27478148 None:intergenic 30.0%
!!! TTTTGCAGATTTTAGCTTGT+TGG - chr2_1:27478285-27478304 Msa0203550:CDS 30.0%
!!! TTTGCAGATTTTAGCTTGTT+GGG - chr2_1:27478286-27478305 Msa0203550:CDS 30.0%
!!! TTGTTTTAGTTGCAAAGTTG+TGG - chr2_1:27478324-27478343 Msa0203550:CDS 30.0%
GAATATTGAAGAAGATTCAG+AGG - chr2_1:27478369-27478388 Msa0203550:CDS 30.0%
!! ACTTTTAGTGGCATTTTTTG+GGG - chr2_1:27478396-27478415 Msa0203550:CDS 30.0%
CTTTGTGGTAAGAATCAAAA+AGG - chr2_1:27478463-27478482 Msa0203550:CDS 30.0%
!! TCAAAAAGGGTTATTTTGTG+AGG - chr2_1:27478477-27478496 Msa0203550:CDS 30.0%
TTGATATTGTGGAATACTTG+AGG - chr2_1:27478550-27478569 Msa0203550:CDS 30.0%
!! ACTTTTTGAGGGTATAATGA+AGG - chr2_1:27478639-27478658 Msa0203550:CDS 30.0%
TGTTCAGAGATTAATGAAAC+AGG + chr2_1:27478756-27478775 None:intergenic 30.0%
AACCCCTTACTCATATTTAT+TGG + chr2_1:27478860-27478879 None:intergenic 30.0%
GTGAGAAGGTGATTAAATTA+AGG + chr2_1:27479084-27479103 None:intergenic 30.0%
! TTGTGGATTGCATAAAATAG+TGG - chr2_1:27479113-27479132 Msa0203550:intron 30.0%
TTGATTTCTGTACCTATAAC+AGG - chr2_1:27479300-27479319 Msa0203550:CDS 30.0%
ACGAAGAAATACTATAGCAT+TGG + chr2_1:27479446-27479465 None:intergenic 30.0%
! GCTATAGTATTTCTTCGTTT+TGG - chr2_1:27479448-27479467 Msa0203550:intron 30.0%
GATCGAAAAAACTTCATAGA+AGG + chr2_1:27479697-27479716 None:intergenic 30.0%
!!! CTATGAAGTTTTTTCGATCT+TGG - chr2_1:27479698-27479717 Msa0203550:intron 30.0%
!! GTTTACTCATTTTTCCTTCT+TGG - chr2_1:27479843-27479862 Msa0203550:CDS 30.0%
! AAGTTAATTTGGAGAGCATA+TGG + chr2_1:27479997-27480016 None:intergenic 30.0%
ATACTGATATTGTCTCTGTT+AGG + chr2_1:27480126-27480145 None:intergenic 30.0%
! CTACTTTATTTACAGGTTGA+AGG + chr2_1:27480298-27480317 None:intergenic 30.0%
CTTCAACCTGTAAATAAAGT+AGG - chr2_1:27480296-27480315 Msa0203550:intron 30.0%
CAACATGTTATTAGACTGAA+CGG + chr2_1:27480326-27480345 None:intergenic 30.0%
! GTTTTGCAAAAGAATTCTGA+GGG + chr2_1:27480490-27480509 None:intergenic 30.0%
! AGTTTTGCAAAAGAATTCTG+AGG + chr2_1:27480491-27480510 None:intergenic 30.0%
GACAATATATTCAGGGATTA+AGG + chr2_1:27480792-27480811 None:intergenic 30.0%
! GAGATTCTGTTCTTTTTATC+AGG - chr2_1:27480917-27480936 Msa0203550:intron 30.0%
! TCTGTTCTTTTTATCAGGTA+AGG - chr2_1:27480922-27480941 Msa0203550:intron 30.0%
ATGTTCTCATAGGAAATAGA+TGG + chr2_1:27481201-27481220 None:intergenic 30.0%
ATCTATTTCCTATGAGAACA+TGG - chr2_1:27481200-27481219 Msa0203550:intron 30.0%
!!! CCGATATATGTCATTTTAAC+AGG - chr2_1:27481261-27481280 Msa0203550:intron 30.0%
AATGGAATCACAAATTCACA+GGG + chr2_1:27481293-27481312 None:intergenic 30.0%
! TGTTAGTTTCATCAAGAACT+AGG - chr2_1:27481491-27481510 Msa0203550:intron 30.0%
ATTGTACTAAACTCAAACCA+GGG + chr2_1:27482330-27482349 None:intergenic 30.0%
! ATTGGAAATTTTGTTGGGAT+TGG + chr2_1:27482891-27482910 None:intergenic 30.0%
! AGCTGATTGGAAATTTTGTT+GGG + chr2_1:27482896-27482915 None:intergenic 30.0%
TCAAAGAAACAAGACAAGCA+TGG + chr2_1:27477933-27477952 None:intergenic 35.0%
! TTCCTTTTCTTCTGATTTCC+CGG - chr2_1:27478036-27478055 Msa0203550:CDS 35.0%
CAAGTAGAAAAAAGCAAAGC+AGG + chr2_1:27478105-27478124 None:intergenic 35.0%
! AGTTGCAAAGTTGTGGTTTT+TGG - chr2_1:27478331-27478350 Msa0203550:CDS 35.0%
! TTCAGAGGTGAAACTTTTAG+TGG - chr2_1:27478384-27478403 Msa0203550:CDS 35.0%
!! CTTTTAGTGGCATTTTTTGG+GGG - chr2_1:27478397-27478416 Msa0203550:CDS 35.0%
ATAATGAAGGCTCCTTCTAA+TGG - chr2_1:27478652-27478671 Msa0203550:CDS 35.0%
TTAGCCAAGTAACCATTAGA+AGG + chr2_1:27478667-27478686 None:intergenic 35.0%
AATGGTTACTTGGCTAATTC+TGG - chr2_1:27478670-27478689 Msa0203550:CDS 35.0%
!!! TGGTGAAGGTGTGTTTTTTA+AGG - chr2_1:27478690-27478709 Msa0203550:CDS 35.0%
!!! CAGAGAAGTTGTAGTTTTGA+AGG - chr2_1:27478951-27478970 Msa0203550:CDS 35.0%
ATGCAATCCACAATTGACAA+AGG + chr2_1:27479106-27479125 None:intergenic 35.0%
CACTTTGTAATAGCGTATTG+CGG - chr2_1:27479194-27479213 Msa0203550:intron 35.0%
AGACCATCAATTCAGAGTTA+TGG - chr2_1:27479331-27479350 Msa0203550:CDS 35.0%
ATGCCATAACTCTGAATTGA+TGG + chr2_1:27479337-27479356 None:intergenic 35.0%
CTTGAGGAAAGTAAACAACA+AGG + chr2_1:27479401-27479420 None:intergenic 35.0%
!! CTTGTTGTTTACTTTCCTCA+AGG - chr2_1:27479399-27479418 Msa0203550:CDS 35.0%
CTGCAACCTAAAAGTTATTG+TGG + chr2_1:27479498-27479517 None:intergenic 35.0%
! ATCATTCAGGTTTCTTGATG+AGG + chr2_1:27479885-27479904 None:intergenic 35.0%
TTCGGGGAACATAAAATGAA+CGG + chr2_1:27480363-27480382 None:intergenic 35.0%
! AAAAGAATTCTGAGGGTTGT+TGG + chr2_1:27480483-27480502 None:intergenic 35.0%
!! TTACCAGAAGTGTCTTTGAT+AGG - chr2_1:27480653-27480672 Msa0203550:intron 35.0%
TGTAGTGTCATGCAAATCTT+TGG + chr2_1:27480715-27480734 None:intergenic 35.0%
AAGATTTGCATGACACTACA+TGG - chr2_1:27480715-27480734 Msa0203550:intron 35.0%
ACAAATGTACATCAACAACG+TGG + chr2_1:27480988-27481007 None:intergenic 35.0%
ATAGATGGCAAATAGTACCT+TGG + chr2_1:27481186-27481205 None:intergenic 35.0%
ATTGCATTCCATGTTCTCAT+AGG + chr2_1:27481211-27481230 None:intergenic 35.0%
ATGGAATCACAAATTCACAG+GGG + chr2_1:27481292-27481311 None:intergenic 35.0%
CAATGGAATCACAAATTCAC+AGG + chr2_1:27481294-27481313 None:intergenic 35.0%
CTGTGAATTTGTGATTCCAT+TGG - chr2_1:27481292-27481311 Msa0203550:intron 35.0%
! GCTTTGTTATACTTTGCCAA+TGG + chr2_1:27481311-27481330 None:intergenic 35.0%
CATTCTGAATCTCATTCCAA+GGG + chr2_1:27481351-27481370 None:intergenic 35.0%
TCATTCTGAATCTCATTCCA+AGG + chr2_1:27481352-27481371 None:intergenic 35.0%
AATATGTCACAGACACAACA+AGG + chr2_1:27481781-27481800 None:intergenic 35.0%
!!! ACATGTTTTCTAGCTTCTTG+AGG - chr2_1:27481845-27481864 Msa0203550:intron 35.0%
CCCAAATTGAAACTCTACTT+GGG + chr2_1:27481927-27481946 None:intergenic 35.0%
CCCAAGTAGAGTTTCAATTT+GGG - chr2_1:27481924-27481943 Msa0203550:CDS 35.0%
TCCCAAATTGAAACTCTACT+TGG + chr2_1:27481928-27481947 None:intergenic 35.0%
ATGTAAAAAGGAGTCACAAC+TGG + chr2_1:27481958-27481977 None:intergenic 35.0%
CATTGTACTAAACTCAAACC+AGG + chr2_1:27482331-27482350 None:intergenic 35.0%
! CTGGTTTGAGTTTAGTACAA+TGG - chr2_1:27482329-27482348 Msa0203550:intron 35.0%
!! TTGACTTGGTTCGGTAAATT+AGG + chr2_1:27482538-27482557 None:intergenic 35.0%
!! TGCAATTGATTGACTTGGTT+CGG + chr2_1:27482547-27482566 None:intergenic 35.0%
ACTATGAATAACGGCACAAT+TGG - chr2_1:27482784-27482803 Msa0203550:intron 35.0%
! CAGCTGATTGGAAATTTTGT+TGG + chr2_1:27482897-27482916 None:intergenic 35.0%
CAACAAAATTTCCAATCAGC+TGG - chr2_1:27482895-27482914 Msa0203550:intron 35.0%
TGAGACATTTGTGATTGTTG+TGG + chr2_1:27483078-27483097 None:intergenic 35.0%
TTGAGAGGAATAAGGAAGGA+GGG + chr2_1:27478081-27478100 None:intergenic 40.0%
TTTGAGAGGAATAAGGAAGG+AGG + chr2_1:27478082-27478101 None:intergenic 40.0%
AGGTTTGAGAGGAATAAGGA+AGG + chr2_1:27478085-27478104 None:intergenic 40.0%
AAGCAGGTTTGAGAGGAATA+AGG + chr2_1:27478089-27478108 None:intergenic 40.0%
AAAAGCAAAGCAGGTTTGAG+AGG + chr2_1:27478096-27478115 None:intergenic 40.0%
!!! TGGCATTTTTTGGGGGAAAA+AGG - chr2_1:27478404-27478423 Msa0203550:CDS 40.0%
! GGGGAAAAAGGTGAACTTTT+TGG - chr2_1:27478416-27478435 Msa0203550:CDS 40.0%
!!! GTTGTTGCTGCTGCTATTTT+TGG - chr2_1:27478504-27478523 Msa0203550:intron 40.0%
TGTGGAATACTTGAGGAACA+AGG - chr2_1:27478557-27478576 Msa0203550:CDS 40.0%
TACTTGGCTAATTCTGGTGA+AGG - chr2_1:27478676-27478695 Msa0203550:CDS 40.0%
CACAATTGACAAAGGTGAGA+AGG + chr2_1:27479098-27479117 None:intergenic 40.0%
CTTCTCACCTTTGTCAATTG+TGG - chr2_1:27479096-27479115 Msa0203550:intron 40.0%
CTGTACCTATAACAGGTGAA+AGG - chr2_1:27479307-27479326 Msa0203550:CDS 40.0%
GTCTTCCTTTCACCTGTTAT+AGG + chr2_1:27479315-27479334 None:intergenic 40.0%
TAAACAACAAGGCTTCCAAC+AGG + chr2_1:27479390-27479409 None:intergenic 40.0%
ACTTGTTCACTATGTCCTTG+AGG + chr2_1:27479417-27479436 None:intergenic 40.0%
TCAACTTGGATGGAAGGTTA+GGG + chr2_1:27479558-27479577 None:intergenic 40.0%
ATCAACTTGGATGGAAGGTT+AGG + chr2_1:27479559-27479578 None:intergenic 40.0%
TACAGATCAACTTGGATGGA+AGG + chr2_1:27479564-27479583 None:intergenic 40.0%
AGCATACAGATCAACTTGGA+TGG + chr2_1:27479568-27479587 None:intergenic 40.0%
GTGAAGCATACAGATCAACT+TGG + chr2_1:27479572-27479591 None:intergenic 40.0%
!! ATGTAGGTCCACTTTTCTCA+TGG - chr2_1:27479605-27479624 Msa0203550:intron 40.0%
!! TGTAGGTCCACTTTTCTCAT+GGG - chr2_1:27479606-27479625 Msa0203550:intron 40.0%
! ATTCAGGTTTCTTGATGAGG+TGG + chr2_1:27479882-27479901 None:intergenic 40.0%
! GGCTGACCTACTTTATTTAC+AGG + chr2_1:27480305-27480324 None:intergenic 40.0%
CTTTCTCCTACAGTATGACA+AGG - chr2_1:27480420-27480439 Msa0203550:CDS 40.0%
TTGCTTCCTTGTCATACTGT+AGG + chr2_1:27480429-27480448 None:intergenic 40.0%
TGAGAAAATATTCCCACCTC+TGG - chr2_1:27480567-27480586 Msa0203550:CDS 40.0%
AAATGATGCATACACACCAG+AGG + chr2_1:27480586-27480605 None:intergenic 40.0%
AGTCCTATCAAAGACACTTC+TGG + chr2_1:27480659-27480678 None:intergenic 40.0%
GTAGTCAATAGATGCCTCTT+TGG + chr2_1:27480856-27480875 None:intergenic 40.0%
!! AAGAGGCATCTATTGACTAC+TGG - chr2_1:27480856-27480875 Msa0203550:CDS 40.0%
GTGTCTTCGTTAGCACAAAA+AGG - chr2_1:27480884-27480903 Msa0203550:intron 40.0%
GAAAAGCAGCAACTTCTCTT+AGG - chr2_1:27481027-27481046 Msa0203550:CDS 40.0%
ATTACCGATGAAGATAGTGC+TGG + chr2_1:27481078-27481097 None:intergenic 40.0%
TCAAGTGACAGCATGCATAT+CGG - chr2_1:27481099-27481118 Msa0203550:intron 40.0%
GACATATATCGGTCTGTAAG+AGG + chr2_1:27481253-27481272 None:intergenic 40.0%
! CAGAATGATGTTTGAGACAG+AGG - chr2_1:27481364-27481383 Msa0203550:intron 40.0%
! ATGTTTGAGACAGAGGATTC+CGG - chr2_1:27481371-27481390 Msa0203550:intron 40.0%
AGATATATGGGCACAATCAC+TGG - chr2_1:27481401-27481420 Msa0203550:intron 40.0%
GATATATGGGCACAATCACT+GGG - chr2_1:27481402-27481421 Msa0203550:intron 40.0%
TCCGCTGGAAAAATTCACAA+TGG - chr2_1:27481444-27481463 Msa0203550:intron 40.0%
! GCCATTGTGAATTTTTCCAG+CGG + chr2_1:27481448-27481467 None:intergenic 40.0%
!! TAATTGAATGGTGACGGTGT+CGG + chr2_1:27481699-27481718 None:intergenic 40.0%
CTACGTGTCAGTGTTGTATT+CGG - chr2_1:27481752-27481771 Msa0203550:CDS 40.0%
GCCCAAGTAGAGTTTCAATT+TGG - chr2_1:27481923-27481942 Msa0203550:CDS 40.0%
GGAGGTGGACAAATGTAAAA+AGG + chr2_1:27481970-27481989 None:intergenic 40.0%
!!! TTTGTCCACCTCCGTTTTTT+AGG - chr2_1:27481977-27481996 Msa0203550:intron 40.0%
CATTGCATTTGACGAAAGCA+TGG + chr2_1:27482425-27482444 None:intergenic 40.0%
CTTTCGTCAAATGCAATGCA+TGG - chr2_1:27482427-27482446 Msa0203550:intron 40.0%
TGGAAGTTCAGTATCTTGGA+CGG + chr2_1:27482472-27482491 None:intergenic 40.0%
GGATTGGAAGTTCAGTATCT+TGG + chr2_1:27482476-27482495 None:intergenic 40.0%
GCTGTTGCAATTGATTGACT+TGG + chr2_1:27482552-27482571 None:intergenic 40.0%
!!! TAGTCGTATTTTGAGGCTGT+TGG + chr2_1:27482768-27482787 None:intergenic 40.0%
TGAAGCTGAGAGTAGTTTAC+TGG + chr2_1:27482844-27482863 None:intergenic 40.0%
! GTTGTTGGTCTATTTGTTGC+TGG + chr2_1:27482966-27482985 None:intergenic 40.0%
CAAATAGACCAACAACAAGC+CGG - chr2_1:27482970-27482989 Msa0203550:CDS 40.0%
TGCAACAAAGCATGTTGCAA+AGG - chr2_1:27483049-27483068 Msa0203550:intron 40.0%
GCAACAAAGCATGTTGCAAA+GGG - chr2_1:27483050-27483069 Msa0203550:intron 40.0%
!! TGTTGGTCTGAGATGTTTTG+CGG + chr2_1:27483108-27483127 None:intergenic 40.0%
CGGCTTCTCACATAAAGCAA+AGG - chr2_1:27477981-27478000 Msa0203550:CDS 45.0%
! TGATGTTTCTGACTTGTCGC+CGG + chr2_1:27478058-27478077 None:intergenic 45.0%
!!! GTTGCTGCTGCTATTTTTGG+AGG - chr2_1:27478507-27478526 Msa0203550:intron 45.0%
GGCTCCTTCTAATGGTTACT+TGG - chr2_1:27478660-27478679 Msa0203550:CDS 45.0%
!! TGGTTTGTTTAAACTCCGCG+CGG - chr2_1:27479133-27479152 Msa0203550:intron 45.0%
ACAGGCGGTATAGAAACCAA+TGG + chr2_1:27479372-27479391 None:intergenic 45.0%
TTGGTTTCTATACCGCCTGT+TGG - chr2_1:27479372-27479391 Msa0203550:CDS 45.0%
GGTTGCAGCATCTATGCAAA+AGG - chr2_1:27479510-27479529 Msa0203550:intron 45.0%
TGCAGCATCTATGCAAAAGG+AGG - chr2_1:27479513-27479532 Msa0203550:intron 45.0%
GATGGAAGGTTAGGGTAACT+TGG + chr2_1:27479550-27479569 None:intergenic 45.0%
GAAAAGTGGACCTACATGCA+GGG + chr2_1:27479602-27479621 None:intergenic 45.0%
AGAAAAGTGGACCTACATGC+AGG + chr2_1:27479603-27479622 None:intergenic 45.0%
GCTATGTCCCATGAGAAAAG+TGG + chr2_1:27479616-27479635 None:intergenic 45.0%
! TTTCGATCTTGGCTAGTCGT+AGG - chr2_1:27479709-27479728 Msa0203550:intron 45.0%
GCAATCGATAGACACCAAGA+AGG + chr2_1:27479860-27479879 None:intergenic 45.0%
! AGCAATGCTAGCTTCAGACA+TGG - chr2_1:27480444-27480463 Msa0203550:CDS 45.0%
! GCAATGCTAGCTTCAGACAT+GGG - chr2_1:27480445-27480464 Msa0203550:CDS 45.0%
! ATTTTCTCAGCAGCTCTACG+AGG + chr2_1:27480556-27480575 None:intergenic 45.0%
TTGGCAACTATTTCCTGAGC+TGG + chr2_1:27480696-27480715 None:intergenic 45.0%
ATTGCATCAACATCGGTCAC+AGG - chr2_1:27480826-27480845 Msa0203550:CDS 45.0%
! GGCATCTATTGACTACTGGT+TGG - chr2_1:27480860-27480879 Msa0203550:CDS 45.0%
AGCACAAAAAGGCTCTTTGC+TGG - chr2_1:27480895-27480914 Msa0203550:intron 45.0%
GCAACCAGCACTATCTTCAT+CGG - chr2_1:27481071-27481090 Msa0203550:intron 45.0%
CTGTACACTCATGTTTCCCT+TGG - chr2_1:27481332-27481351 Msa0203550:intron 45.0%
TTCCGGAGTACGCAGATATA+TGG - chr2_1:27481388-27481407 Msa0203550:intron 45.0%
TCCGGAGTACGCAGATATAT+GGG - chr2_1:27481389-27481408 Msa0203550:intron 45.0%
AATCACTGGGATCAGTGACT+TGG - chr2_1:27481415-27481434 Msa0203550:intron 45.0%
! TGTGAATTTTTCCAGCGGAC+AGG + chr2_1:27481443-27481462 None:intergenic 45.0%
TTCACAATGGCGCAATCTTC+AGG - chr2_1:27481457-27481476 Msa0203550:intron 45.0%
AACTTCGGCCTAAAAAACGG+AGG + chr2_1:27481988-27482007 None:intergenic 45.0%
GGGAACTTCGGCCTAAAAAA+CGG + chr2_1:27481991-27482010 None:intergenic 45.0%
CATTCAAGAGAGCTATGCCA+TGG - chr2_1:27482260-27482279 Msa0203550:intron 45.0%
ACCTCAAGTTCAATCTTCCC+TGG - chr2_1:27482310-27482329 Msa0203550:intron 45.0%
ACCAGGGAAGATTGAACTTG+AGG + chr2_1:27482314-27482333 None:intergenic 45.0%
! AGTTTTCCGCTGCTCAATCA+GGG - chr2_1:27482386-27482405 Msa0203550:intron 45.0%
TAAAAGCCCTGATTGAGCAG+CGG + chr2_1:27482395-27482414 None:intergenic 45.0%
! TTTGACGAAAGCATGGATGG+AGG + chr2_1:27482418-27482437 None:intergenic 45.0%
! GCATTTGACGAAAGCATGGA+TGG + chr2_1:27482421-27482440 None:intergenic 45.0%
GGAAGTTCAGTATCTTGGAC+GGG + chr2_1:27482471-27482490 None:intergenic 45.0%
GGATTCTGTTGAGTCAGTTG+AGG + chr2_1:27482718-27482737 None:intergenic 45.0%
!! GTACACACTGATTCGGAATC+TGG + chr2_1:27482816-27482835 None:intergenic 45.0%
! GGTTGCTGTACACACTGATT+CGG + chr2_1:27482823-27482842 None:intergenic 45.0%
CTTCAGCAACAGTTACTCTC+AGG - chr2_1:27482859-27482878 Msa0203550:intron 45.0%
TTCCAATCAGCTGGCAAGAA+TGG - chr2_1:27482904-27482923 Msa0203550:intron 45.0%
ATCCATTCTTGCCAGCTGAT+TGG + chr2_1:27482909-27482928 None:intergenic 45.0%
! GAATTGCGAGTCTTGTGGTA+AGG + chr2_1:27482944-27482963 None:intergenic 45.0%
ACAACTGCAACTGTTGCTGT+TGG + chr2_1:27483125-27483144 None:intergenic 45.0%
AAGCTGAGACTGCAAAAGTG+GGG + chr2_1:27483232-27483251 None:intergenic 45.0%
GAAGCTGAGACTGCAAAAGT+GGG + chr2_1:27483233-27483252 None:intergenic 45.0%
AGAAGCTGAGACTGCAAAAG+TGG + chr2_1:27483234-27483253 None:intergenic 45.0%
!! GGTAATTGCTGGCTTTGTTG+CGG + chr2_1:27483258-27483277 None:intergenic 45.0%
CGGAAACAACGCATTCTCAA+TGG - chr2_1:27483314-27483333 Msa0203550:intron 45.0%
CGCCGGGAAATCAGAAGAAA+AGG + chr2_1:27478041-27478060 None:intergenic 50.0%
! GATGTTTCTGACTTGTCGCC+GGG + chr2_1:27478057-27478076 None:intergenic 50.0%
GAGTTATGGCATGCTTGTGC+CGG - chr2_1:27479345-27479364 Msa0203550:CDS 50.0%
AGTTATGGCATGCTTGTGCC+GGG - chr2_1:27479346-27479365 Msa0203550:CDS 50.0%
CGGTATAGAAACCAATGGCC+CGG + chr2_1:27479367-27479386 None:intergenic 50.0%
ACAACAAGGCTTCCAACAGG+CGG + chr2_1:27479387-27479406 None:intergenic 50.0%
CACAATGTTGCCCTGCATGT+AGG - chr2_1:27479589-27479608 Msa0203550:intron 50.0%
TGTCTCTGTTAGGCCCTGTT+CGG + chr2_1:27480116-27480135 None:intergenic 50.0%
!! CATAGACCTCGTCGGTTTCA+GGG + chr2_1:27480265-27480284 None:intergenic 50.0%
CATCTGTGCATAGACCTCGT+CGG + chr2_1:27480273-27480292 None:intergenic 50.0%
GCTAGTGACACTAGCACTCA+CGG - chr2_1:27480517-27480536 Msa0203550:intron 50.0%
GATGCATACACACCAGAGGT+GGG + chr2_1:27480582-27480601 None:intergenic 50.0%
TGATGCATACACACCAGAGG+TGG + chr2_1:27480583-27480602 None:intergenic 50.0%
GCAACTATTTCCTGAGCTGG+CGG + chr2_1:27480693-27480712 None:intergenic 50.0%
!! TAGTGCTGGTTGCTGTCTAC+TGG + chr2_1:27481064-27481083 None:intergenic 50.0%
TATCGGCATTCTTGCTGCTG+CGG - chr2_1:27481116-27481135 Msa0203550:intron 50.0%
GCCCATATATCTGCGTACTC+CGG + chr2_1:27481393-27481412 None:intergenic 50.0%
TCGGACAAGTGTCAGACACT+CGG + chr2_1:27481680-27481699 None:intergenic 50.0%
TTCGGCCTAAAAAACGGAGG+TGG + chr2_1:27481985-27482004 None:intergenic 50.0%
TTGCCTCTCCTCATATCCCA+TGG - chr2_1:27482158-27482177 Msa0203550:intron 50.0%
CATCCATGGGATATGAGGAG+AGG + chr2_1:27482164-27482183 None:intergenic 50.0%
CTCTCCTCATATCCCATGGA+TGG - chr2_1:27482162-27482181 Msa0203550:intron 50.0%
AGCACCATCCATGGGATATG+AGG + chr2_1:27482169-27482188 None:intergenic 50.0%
! ATATCCCATGGATGGTGCTG+TGG - chr2_1:27482170-27482189 Msa0203550:intron 50.0%
CAATCCACAGCACCATCCAT+GGG + chr2_1:27482177-27482196 None:intergenic 50.0%
TCAATCCACAGCACCATCCA+TGG + chr2_1:27482178-27482197 None:intergenic 50.0%
AAGAGAGCTATGCCATGGCT+TGG - chr2_1:27482265-27482284 Msa0203550:intron 50.0%
! CCATGGCTTGGAGATGAACT+CGG - chr2_1:27482277-27482296 Msa0203550:intron 50.0%
TGGAGATGAACTCGGCATGA+AGG - chr2_1:27482285-27482304 Msa0203550:intron 50.0%
! CAGTTTTCCGCTGCTCAATC+AGG - chr2_1:27482385-27482404 Msa0203550:intron 50.0%
CAATCAATTGCAACAGCCCC+CGG - chr2_1:27482555-27482574 Msa0203550:intron 50.0%
! TGCTGCTGCAGCTGGTTTAA+CGG + chr2_1:27482625-27482644 None:intergenic 50.0%
!! TGGTGTTGTTGCTGCTGTTG+AGG + chr2_1:27482748-27482767 None:intergenic 50.0%
TGCTGGAATTGCGAGTCTTG+TGG + chr2_1:27482949-27482968 None:intergenic 50.0%
!! GTAAGAGACCGGCTTGTTGT+TGG + chr2_1:27482981-27483000 None:intergenic 50.0%
AACAAGCCGGTCTCTTACAG+CGG - chr2_1:27482983-27483002 Msa0203550:CDS 50.0%
AGTGGGGAAGATGTGGAAAG+TGG + chr2_1:27483216-27483235 None:intergenic 50.0%
CTGCAAAAGTGGGGAAGATG+TGG + chr2_1:27483223-27483242 None:intergenic 50.0%
TAGGCTGCTGAGGTAATTGC+TGG + chr2_1:27483269-27483288 None:intergenic 50.0%
! TGCGTTGTTTCCGAGCTGTT+GGG + chr2_1:27483307-27483326 None:intergenic 50.0%
! ATGCGTTGTTTCCGAGCTGT+TGG + chr2_1:27483308-27483327 None:intergenic 50.0%
AGCTGCTGTGGATGCATAAG+AGG + chr2_1:27483372-27483391 None:intergenic 50.0%
TGTTTAAACTCCGCGCGGCA+TGG - chr2_1:27479138-27479157 Msa0203550:intron 55.0%
!! GCATAGACCTCGTCGGTTTC+AGG + chr2_1:27480266-27480285 None:intergenic 55.0%
AGTGACACTAGCACTCACGG+TGG - chr2_1:27480520-27480539 Msa0203550:intron 55.0%
CGGTCACAGGACAACCAAAG+AGG - chr2_1:27480839-27480858 Msa0203550:CDS 55.0%
GGATGGGACGAATCAACAGC+TGG - chr2_1:27481895-27481914 Msa0203550:CDS 55.0%
CCTGGTTGCTTCGGGAACTT+CGG + chr2_1:27482003-27482022 None:intergenic 55.0%
CTGGCATTCCTGGTTGCTTC+GGG + chr2_1:27482011-27482030 None:intergenic 55.0%
CCTGGCATTCCTGGTTGCTT+CGG + chr2_1:27482012-27482031 None:intergenic 55.0%
CTCTTGCTACCTGGCATTCC+TGG + chr2_1:27482021-27482040 None:intergenic 55.0%
AGGGAGGAACTCTTGCTACC+TGG + chr2_1:27482030-27482049 None:intergenic 55.0%
!! GGATGGTGCTGTGGATTGAC+TGG - chr2_1:27482179-27482198 Msa0203550:intron 55.0%
CCGAGTTCATCTCCAAGCCA+TGG + chr2_1:27482280-27482299 None:intergenic 55.0%
TGGACGGGTCATCAGTGCTA+AGG + chr2_1:27482456-27482475 None:intergenic 55.0%
TTGGAGCAGAGAGCGAAGCA+GGG + chr2_1:27482498-27482517 None:intergenic 55.0%
! TGTGGCTGCGGCAGATTTTG+TGG + chr2_1:27482685-27482704 None:intergenic 55.0%
AGTTGAGGCTGTTGCTGCTG+TGG + chr2_1:27482703-27482722 None:intergenic 55.0%
! GCGTTGTTTCCGAGCTGTTG+GGG + chr2_1:27483306-27483325 None:intergenic 55.0%
CTCAATGCAACCGCCAGCTC+AGG - chr2_1:27480680-27480699 Msa0203550:intron 60.0%
! GTGACTTGGATCCTGTCCGC+TGG - chr2_1:27481429-27481448 Msa0203550:intron 60.0%
CCGAAGTTCCCGAAGCAACC+AGG - chr2_1:27482000-27482019 Msa0203550:intron 60.0%
CCGAAGCAACCAGGAATGCC+AGG - chr2_1:27482009-27482028 Msa0203550:intron 60.0%
CAGAGAGCGAAGCAGGGGAT+TGG + chr2_1:27482492-27482511 None:intergenic 60.0%
TGGAGCAGAGAGCGAAGCAG+GGG + chr2_1:27482497-27482516 None:intergenic 60.0%
CTTGGAGCAGAGAGCGAAGC+AGG + chr2_1:27482499-27482518 None:intergenic 60.0%
TGTTGCTGAGACCACGAGGC+CGG + chr2_1:27482577-27482596 None:intergenic 60.0%
CTGCTGTTGCTGAGACCACG+AGG + chr2_1:27482581-27482600 None:intergenic 60.0%
AGCAGCAGCAACAGCAGCAG+AGG - chr2_1:27482641-27482660 Msa0203550:CDS 60.0%
TGCTGCTGTTGAGGCTGCTG+CGG + chr2_1:27482739-27482758 None:intergenic 60.0%
CTGCTGCCGCTGTAAGAGAC+CGG + chr2_1:27482992-27483011 None:intergenic 60.0%
TGCTGGGACATAGGCTGCTG+AGG + chr2_1:27483279-27483298 None:intergenic 60.0%
TGGGGCTGATGCTGGGACAT+AGG + chr2_1:27483288-27483307 None:intergenic 60.0%
GAGCTGTTGGGGCTGATGCT+GGG + chr2_1:27483295-27483314 None:intergenic 60.0%
CAGCATCAGCCCCAACAGCT+CGG - chr2_1:27483294-27483313 Msa0203550:intron 60.0%
GCATGCTTGTGCCGGGCCAT+TGG - chr2_1:27479353-27479372 Msa0203550:CDS 65.0%
GGCTGACCCTGAAACCGACG+AGG - chr2_1:27480256-27480275 Msa0203550:CDS 65.0%
TTGCTGAGACCACGAGGCCG+GGG + chr2_1:27482575-27482594 None:intergenic 65.0%
GTTGCTGAGACCACGAGGCC+GGG + chr2_1:27482576-27482595 None:intergenic 65.0%
GTTGCTGCTGCTGCTGCAGC+TGG + chr2_1:27482633-27482652 None:intergenic 65.0%
GCAGCAGAGGCAACAGCAGC+TGG - chr2_1:27482654-27482673 Msa0203550:intron 65.0%
CAGAGGCAACAGCAGCTGGC+TGG - chr2_1:27482658-27482677 Msa0203550:intron 65.0%
GGCTGTTGCTGCTGTGGCTG+CGG + chr2_1:27482697-27482716 None:intergenic 65.0%
CGAGCTGTTGGGGCTGATGC+TGG + chr2_1:27483296-27483315 None:intergenic 65.0%
CGCTGTAGCACCATGCCGCG+CGG + chr2_1:27479151-27479170 None:intergenic 70.0%
TGCTGAGACCACGAGGCCGG+GGG + chr2_1:27482574-27482593 None:intergenic 70.0%
TGCAACAGCCCCCGGCCTCG+TGG - chr2_1:27482563-27482582 Msa0203550:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 27477915 27483399 27477915 ID=Msa0203550;Name=Msa0203550
chr2_1 mRNA 27477915 27483399 27477915 ID=Msa0203550-mRNA-1;Parent=Msa0203550;Name=Msa0203550-mRNA-1;_AED=0.17;_eAED=0.23;_QI=0|0.58|0.5|1|0.58|0.61|18|0|757
chr2_1 exon 27483396 27483399 27483396 ID=Msa0203550-mRNA-1:exon:10181;Parent=Msa0203550-mRNA-1
chr2_1 exon 27482924 27483021 27482924 ID=Msa0203550-mRNA-1:exon:10180;Parent=Msa0203550-mRNA-1
chr2_1 exon 27482617 27482665 27482617 ID=Msa0203550-mRNA-1:exon:10179;Parent=Msa0203550-mRNA-1
chr2_1 exon 27481880 27481992 27481880 ID=Msa0203550-mRNA-1:exon:10178;Parent=Msa0203550-mRNA-1
chr2_1 exon 27481708 27481803 27481708 ID=Msa0203550-mRNA-1:exon:10177;Parent=Msa0203550-mRNA-1
chr2_1 exon 27481001 27481057 27481001 ID=Msa0203550-mRNA-1:exon:10176;Parent=Msa0203550-mRNA-1
chr2_1 exon 27480726 27480881 27480726 ID=Msa0203550-mRNA-1:exon:10175;Parent=Msa0203550-mRNA-1
chr2_1 exon 27480555 27480639 27480555 ID=Msa0203550-mRNA-1:exon:10174;Parent=Msa0203550-mRNA-1
chr2_1 exon 27480376 27480466 27480376 ID=Msa0203550-mRNA-1:exon:10173;Parent=Msa0203550-mRNA-1
chr2_1 exon 27480127 27480291 27480127 ID=Msa0203550-mRNA-1:exon:10172;Parent=Msa0203550-mRNA-1
chr2_1 exon 27479836 27480031 27479836 ID=Msa0203550-mRNA-1:exon:10171;Parent=Msa0203550-mRNA-1
chr2_1 exon 27479284 27479422 27479284 ID=Msa0203550-mRNA-1:exon:10170;Parent=Msa0203550-mRNA-1
chr2_1 exon 27478983 27479078 27478983 ID=Msa0203550-mRNA-1:exon:10169;Parent=Msa0203550-mRNA-1
chr2_1 exon 27478762 27478970 27478762 ID=Msa0203550-mRNA-1:exon:10168;Parent=Msa0203550-mRNA-1
chr2_1 exon 27478509 27478743 27478509 ID=Msa0203550-mRNA-1:exon:10167;Parent=Msa0203550-mRNA-1
chr2_1 exon 27478277 27478497 27478277 ID=Msa0203550-mRNA-1:exon:10166;Parent=Msa0203550-mRNA-1
chr2_1 exon 27478163 27478269 27478163 ID=Msa0203550-mRNA-1:exon:10165;Parent=Msa0203550-mRNA-1
chr2_1 exon 27477915 27478071 27477915 ID=Msa0203550-mRNA-1:exon:10164;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27483396 27483399 27483396 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27482924 27483021 27482924 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27482617 27482665 27482617 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27481880 27481992 27481880 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27481708 27481803 27481708 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27481001 27481057 27481001 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27480726 27480881 27480726 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27480555 27480639 27480555 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27480376 27480466 27480376 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27480127 27480291 27480127 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27479836 27480031 27479836 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27479284 27479422 27479284 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27478983 27479078 27478983 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27478762 27478970 27478762 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27478509 27478743 27478509 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27478277 27478497 27478277 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27478163 27478269 27478163 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
chr2_1 CDS 27477915 27478071 27477915 ID=Msa0203550-mRNA-1:cds;Parent=Msa0203550-mRNA-1
Gene Sequence

>Msa0203550

ATGAATTTTAGCTTGTTGGGCACCCTTAGTTTCACTTGTTTTAGTTGCAAAGTTGTGGTTTTTGGCTTTTTTGAAGTTTTGAATATTGAAGAAGATTCAGAGGGTATAATGAAGGCTCCTTCTAATGGTTACTTGGCTAATTCTGGTGAAGGTGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCCGGGCCATTGGTTTCTATACCGCCTGTTGGAAGCCTTGTTGTTTACTTTCCTCAAGGACATAGTGAACAAGTTGCAGCATCTATGCAAAAGGAGGCTGACATCATACCAAGTTACCCTAACCTTCCATCCAAGTTGATCTGTATGCTTCACAATGTTGCCCTGCATGCTGACCCTGAAACCGACGAGGTCTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAGGAAGCAATGCTAGCTTCAGACATGGGTCTCAAACAAAACCAACAACCCTCAGAATTCTTTTGCAAAACTCTAACAGCTAGTGACACTAGCACTCACGGTGGATTTTCAGTGCCTCGTAGAGCTGCTGAGAAAATATTCCCACCTCTGGACTTCTCAATGCAACCGCCAGCTCAGGAAATAGTTGCCAAAGATTTGCATGACACTACATGGACATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTATTGACTACTGGTTGGAGTGTCTTCGTTAGCACAAAAAGGCTCTTTGCTGGAGATTCTGTTCTTTTTATCAGAGATGAAAAGCAGCAACTTCTCTTAGGTATAAAGAGATCCAGTAGACAGCAACCAGCACTATCTTCATCGGTAATATCAAGTGACAGCATGCATATCGGCATTCTTGCTGCTGCGGCTCATGCTGCTTCGAATAACAGTCCATTTACTATATTTTATAATCCAAGGACTAGCCCCTGTGAATTTGTGATTCCATTGGCAAAGTATAACAAAGCTCTGTACACTCATGTTTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACAGAGGATTCCGGAGTACGCAGATATATGGGCACAATCACTGGGATCAGTGACTTGGATCCTGTCCGCTGGAAAAATTCACAATGGCGCAATCTTCAGGTTGGATGGGACGAATCAACAGCTGGTGAGCGCCCAAGTAGAGTTTCAATTTGGGACATTGAACCAGTTGTGACTCCTTTTTACATTTGTCCACCTCCGTTTTTTAGGCCGAAGTTCCCGAAGCAACCAGGAATGCCAGAAGATGAGTCTGAAATCGAAAATGCATTCAAGAGAGCTATGCCATGGCTTGGAGATGAACTCGGCATGAAGGATACCTCAAGTTCAATCTTCCCTGTACAATGGATGAGTATGCAGCAGAATAATAATAATAATAATCAGTTTTCCGCTGCTCAATCAGGGCTTTTACCTCCATCCATGCTTTCGTCAAATGCAATGCATGGTAACCTTAGCACTGATGACCCGTCCAAGATACTGAACTTCCAATCCCCTGCTTCGCTCTCTGCTCCAAGTCTTCAATTTAATAAACCTAATTTACCGAACCAACCCCCGGCCTCGTGGTCTCAGCAACAGCAGCAGAAGATGCAGTCGTTGTTGCCGTTAAACCAGCTGCAGCAGCAGCAGCAACAGCAGCAGAGGCAACAGCAGCTGGCTGGACCACAAAATCTGCCGCAGCCACAGCAGCAACAGCCTCAACTGACTCAACAGAATCCGCAGCAGCCTCAACAGCAGCAACAACACCAACAGCCTCAAAATACGACTATGAATAACGGCACAATTGATTCCGAATCAGTGTGTACAGCAACCAGTAAACTACTCTCAGCTTCAGCAACAGTTACTCTCAGGAAGTATCCAATCCCAACAAAATTTCCAATCAGCTGGCAAGAATGGATTGATAATGACATCCTTACCACAAGACTCGCAATTCCAGCAACAAATAGACCAACAACAAGCCGGTCTCTTACAGCGGCAGCAGCAACAGAATCAGTTGCAGCAATCTTCTTATTGCAACAAAGCATGTTGCAAAGGGCACCACAACAATCACAAATGTCTCAAATTTCGCCGCAAAACATCTCAGACCAACAGCAACAGTTGCAGTTGTTACAGAATCTCAGCTTCTGCCGCAACAAAGCCAGCAATTACCTCAGCAGCCTATGTCCCAGCATCAGCCCCAACAGCTCGGAAACAACGCATTCTCAATGGAGAAGCTTCTCAACAACAATTACTCTTCTTCACCTCTTATGCATCCACAGCAGCTCCCTGTGA
Protein sequence

>Msa0203550

MNFSLLGTLSFTCFSCKVVVFGFFEVLNIEEDSEGIMKAPSNGYLANSGEGERKTINSELWHACAGPLVSIPPVGSLVVYFPQGHSEQVAASMQKEADIIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAMLASDMGLKQNQQPSEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRSSRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRTSPCEFVIPLAKYNKALYTHVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPEDESEIENAFKRAMPWLGDELGMKDTSSSIFPVQWMSMQQNNNNNNQFSAAQSGLLPPSMLSSNAMHGNLSTDDPSKILNFQSPASLSAPSLQFNKPNLPNQPPASWSQQQQQKMQSLLPLNQLQQQQQQQQRQQQLAGPQNLPQPQQQQPQLTQQNPQQPQQQQQHQQPQNTTMNNGTIDSESVCTATSKLLSASATVTLRKYPIPTKFPISWQEWIDNDILTTRLAIPATNRPTTSRSLTAAAATESVAAIFLLQQSMLQRAPQQSQMSQISPQNISDQQQQLQLLQNLSFCRNKASNYLSSLCPSISPNSSETTHSQWRSFSTTITLLHLLCIHSSSL*