AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0655660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655660 MtrunA17_Chr8g0375501 96.934 587 1 4 4 573 5 591 0.0 1157
Msa0655660 MtrunA17_Chr6g0480551 84.509 581 72 5 10 573 9 588 0.0 986
Msa0655660 MtrunA17_Chr5g0434001 74.315 584 132 5 8 573 24 607 0.0 896
Msa0655660 MtrunA17_Chr4g0026371 47.578 578 275 8 17 573 19 589 0.0 533
Msa0655660 MtrunA17_Chr8g0380651 39.616 573 320 8 22 573 22 589 2.84e-135 406
Msa0655660 MtrunA17_Chr2g0277491 39.930 571 319 8 22 573 18 583 7.64e-134 402
Msa0655660 MtrunA17_Chr8g0342031 34.154 609 332 10 29 573 45 648 2.32e-116 359
Msa0655660 MtrunA17_Chr1g0150181 32.577 617 341 12 24 573 29 637 6.44e-105 329
Msa0655660 MtrunA17_Chr3g0136881 32.512 609 336 11 32 573 36 636 1.16e-103 326
Msa0655660 MtrunA17_Chr4g0065301 27.044 636 364 19 27 573 32 656 2.23e-74 249
Msa0655660 MtrunA17_Chr5g0448371 26.562 640 361 19 27 573 42 665 1.97e-64 223
Msa0655660 MtrunA17_Chr3g0120461 25.822 639 367 20 27 573 36 659 1.96e-62 217
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655660 AT2G01970.1 86.348 586 62 5 5 573 8 592 0.0 1005
Msa0655660 AT1G14670.1 86.261 575 62 4 16 573 18 592 0.0 974
Msa0655660 AT5G37310.1 80.416 577 96 4 14 573 17 593 0.0 928
Msa0655660 AT5G37310.2 80.416 577 96 4 14 573 17 593 0.0 928
Msa0655660 AT1G08350.3 49.147 586 273 9 8 573 9 589 0.0 576
Msa0655660 AT1G08350.2 49.147 586 273 9 8 573 9 589 0.0 576
Msa0655660 AT1G08350.1 47.852 512 243 8 82 573 1 508 3.38e-169 490
Msa0655660 AT1G08350.4 47.860 514 244 8 8 501 9 518 4.42e-167 486
Msa0655660 AT1G10950.1 38.908 568 323 8 25 573 27 589 9.19e-131 395
Msa0655660 AT3G13772.1 32.091 617 334 12 29 573 38 641 5.60e-109 340
Msa0655660 AT1G55130.1 32.838 606 344 10 29 573 34 637 3.99e-108 338
Msa0655660 AT2G24170.1 33.553 608 331 12 32 573 37 637 3.16e-106 333
Msa0655660 AT5G10840.1 31.612 639 363 12 2 573 17 648 1.27e-103 326
Msa0655660 AT5G25100.1 31.554 637 353 13 12 573 16 644 1.33e-103 326
Msa0655660 AT5G25100.2 32.190 612 337 12 32 573 48 651 3.62e-103 325
Msa0655660 AT4G12650.1 25.434 633 377 17 27 573 29 652 4.87e-58 205
Msa0655660 AT5G35160.1 31.017 403 252 9 189 573 236 630 1.20e-57 204
Msa0655660 AT5G35160.2 31.017 403 252 9 189 573 264 658 2.07e-57 204
Msa0655660 AT5G35160.3 31.017 403 252 9 189 573 264 658 2.07e-57 204
Msa0655660 AT5G35160.4 31.017 403 252 9 189 573 264 658 2.07e-57 204
Msa0655660 AT2G24170.2 30.120 415 226 10 32 389 37 444 4.30e-55 193

Find 157 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAACTTGAAGGGACTAAT+TGG 0.200318 4_3:+64490364 Msa0655660:CDS
TTGACACTTAAGGTAGATTT+TGG 0.203060 4_3:+64493475 Msa0655660:three_prime_UTR
TTGCCAATCTGGGGATTTAT+TGG 0.213909 4_3:+64489478 Msa0655660:CDS
TACTGAACAAATTACTATTA+AGG 0.241992 4_3:+64493633 Msa0655660:three_prime_UTR
ACCAAGGGCAGCTGCAAATA+TGG 0.266358 4_3:-64490077 None:intergenic
GCAACTGCTGCCCTTCCTTT+TGG 0.272026 4_3:+64490565 Msa0655660:CDS
GACCTTCCATTCTGTGTAAC+AGG 0.280564 4_3:+64487919 Msa0655660:CDS
ATGCAAACTTCGTTCTTCTT+TGG 0.295356 4_3:+64493165 Msa0655660:CDS
GTGAAAGGGACCGACTTTAT+TGG 0.295387 4_3:-64487693 None:intergenic
AAGTTACCAGCGTCCATATT+AGG 0.305475 4_3:-64490606 None:intergenic
TTTCTTTGTGGTGGATCAAC+TGG 0.306655 4_3:+64493081 Msa0655660:CDS
TCAAAGCTTCTGTTGTTATC+AGG 0.309650 4_3:-64493404 None:intergenic
TTTGCGTGATAGTCCTAATA+TGG 0.324378 4_3:+64490593 Msa0655660:CDS
GAAATAACATGACACTAATA+TGG 0.331051 4_3:-64493432 None:intergenic
GCAAGTCATCGTAATACATT+TGG 0.331551 4_3:-64489459 None:intergenic
TTTGCAGCTGCCCTTGGTTC+CGG 0.340488 4_3:+64490082 Msa0655660:CDS
AAAGAAGGAAGAGAAGGAAA+TGG 0.343336 4_3:+64487559 Msa0655660:exon
GCTCTCACATCTGGAATTGC+TGG 0.344836 4_3:+64490318 Msa0655660:CDS
CCACAACTACTCACACTTGA+TGG 0.349739 4_3:-64493280 None:intergenic
ATTACGATGACTTGCCAATC+TGG 0.360772 4_3:+64489467 Msa0655660:CDS
GTCATATATGCTCTCACATC+TGG 0.374176 4_3:+64490309 Msa0655660:CDS
AAATGGGAAGAAGTGTCTTA+TGG 0.378574 4_3:+64487576 Msa0655660:exon
GAAACCCTGCCATTGCCATC+TGG 0.384130 4_3:-64490753 None:intergenic
TCCTTCTATATTCAACTTGA+AGG 0.387134 4_3:+64490354 Msa0655660:CDS
AAATAAAGCTCCTCGGTTGT+AGG 0.389595 4_3:-64490274 None:intergenic
CACATCACTTGGAGATTCAC+TGG 0.393428 4_3:+64489752 Msa0655660:CDS
CCCTTCAAGTTGAATATAGA+AGG 0.401751 4_3:-64490355 None:intergenic
GCAAATATGGACTTGAACTT+AGG 0.402386 4_3:-64490064 None:intergenic
AAGAAGGAAGAGAAGGAAAT+GGG 0.403271 4_3:+64487560 Msa0655660:exon
TCCATATTTGCAGCTGCCCT+TGG 0.404556 4_3:+64490076 Msa0655660:CDS
TTCGTTCTTCTTTGGCTACA+TGG 0.414161 4_3:+64493173 Msa0655660:CDS
GTAGTTGTGGTTGAATGTTT+TGG 0.415869 4_3:+64493293 Msa0655660:exon
TTGCACAAGCTTGACACTTA+AGG 0.429160 4_3:+64493465 Msa0655660:three_prime_UTR
AAGCAATTGCAACTGTGTTA+AGG 0.431380 4_3:-64490537 None:intergenic
ACTTCGCCATTACTTGTGTT+AGG 0.433145 4_3:+64490625 Msa0655660:CDS
GAGAAATTCCACCTCTTCCT+TGG 0.435711 4_3:+64490713 Msa0655660:CDS
GAAAATATTTATACTCGCTC+GGG 0.436229 4_3:-64489528 None:intergenic
ATTGGAACTGTTGACAAAGA+AGG 0.436776 4_3:+64489496 Msa0655660:CDS
AGAAAATATTTATACTCGCT+CGG 0.436979 4_3:-64489529 None:intergenic
AAGGAAGAGGTGGAATTTCT+CGG 0.444124 4_3:-64490711 None:intergenic
AATTTACCTGTTACACAGAA+TGG 0.444335 4_3:-64487925 None:intergenic
TTCTTCTCTTCCACATCACT+TGG 0.450920 4_3:+64489741 Msa0655660:CDS
CGCAAATTGTGCCAAAAGGA+AGG 0.452498 4_3:-64490576 None:intergenic
TTGCTAGTGTCTGGGGCCAC+AGG 0.452557 4_3:+64490815 Msa0655660:intron
AAACCCTGCCATTGCCATCT+GGG 0.456769 4_3:-64490752 None:intergenic
AGGAAGAGGTGGAATTTCTC+GGG 0.456787 4_3:-64490710 None:intergenic
CACGCATGAGAATGGTTGCC+AGG 0.459320 4_3:-64489822 None:intergenic
TGGACTTGAACTTAGGAAAC+CGG 0.463443 4_3:-64490057 None:intergenic
TTCCACCTCTTCCTTGGTAC+AGG 0.464858 4_3:+64490719 Msa0655660:CDS
CTTCAAGACACGCATGAGAA+TGG 0.465748 4_3:-64489830 None:intergenic
TCAACTTGAAGGGACTAATT+GGG 0.473972 4_3:+64490365 Msa0655660:CDS
GTAGTACAGCTCTATGTAGA+TGG 0.476433 4_3:-64490788 None:intergenic
TGCCATTGCCATCTGGGGAA+TGG 0.478930 4_3:-64490746 None:intergenic
CCACTTCCCTGTCCTCAGTC+AGG 0.480439 4_3:-64489639 None:intergenic
ATTCCCCAGATGGCAATGGC+AGG 0.485795 4_3:+64490748 Msa0655660:CDS
AGAAGGAAAGAAGGAAGAGA+AGG 0.485877 4_3:+64487553 Msa0655660:five_prime_UTR
TATGGCTTCTTTCTCATGCT+CGG 0.487027 4_3:+64493207 Msa0655660:CDS
TGTTAAGGAAGCAGAACATA+AGG 0.488623 4_3:-64490522 None:intergenic
CTATGTAGATGGCACTGAAT+GGG 0.490420 4_3:-64490777 None:intergenic
TACATGGCCTGCATCTGCTA+TGG 0.491443 4_3:+64493189 Msa0655660:CDS
ATCTGACAGAGAAGGAAAGA+AGG 0.492163 4_3:+64487544 Msa0655660:five_prime_UTR
TTACGATGACTTGCCAATCT+GGG 0.494168 4_3:+64489468 Msa0655660:CDS
AATAAAGCTCCTCGGTTGTA+GGG 0.495013 4_3:-64490273 None:intergenic
GTCAGGTCAACCACAGAATG+AGG 0.499157 4_3:-64489622 None:intergenic
CCGACTTTATTGGCGTAAAG+AGG 0.503145 4_3:-64487683 None:intergenic
TACGCAAGATCAGATATGTC+TGG 0.503961 4_3:+64493138 Msa0655660:CDS
TCTTTGTCCGCCACATATAC+CGG 0.505280 4_3:+64493256 Msa0655660:CDS
TAGTAGTGCGGACAGGTGCT+TGG 0.505666 4_3:-64490681 None:intergenic
AAGCAGAACATAAGGAAAAG+AGG 0.507100 4_3:-64490514 None:intergenic
TCTATGTAGATGGCACTGAA+TGG 0.507383 4_3:-64490778 None:intergenic
ATATGTGGCGGACAAAGAGC+AGG 0.510664 4_3:-64493251 None:intergenic
ATCGGACCTGGGGTTGTGAA+AGG 0.513272 4_3:-64487708 None:intergenic
CAGCGAGAAGAGAGATCAGC+AGG 0.514359 4_3:-64487604 None:intergenic
TTCTGTTAGTTAATGAGAGA+AGG 0.517716 4_3:+64493330 Msa0655660:three_prime_UTR
TTTCTCATGCTCGGTAGCGT+AGG 0.518262 4_3:+64493216 Msa0655660:CDS
ATCACGCAAATTGTGCCAAA+AGG 0.520209 4_3:-64490580 None:intergenic
CCACAGAATGAGGGTCCATA+CGG 0.520478 4_3:-64489612 None:intergenic
CCTTCTATATTCAACTTGAA+GGG 0.527417 4_3:+64490355 Msa0655660:CDS
GTTAGAAACTTATTGCTGAC+AGG 0.528315 4_3:+64490475 Msa0655660:CDS
TGGTTGACCTGACTGAGGAC+AGG 0.531034 4_3:+64489632 Msa0655660:CDS
CCTGACTGAGGACAGGGAAG+TGG 0.535058 4_3:+64489639 Msa0655660:CDS
GTTCCAATAAATCCCCAGAT+TGG 0.536248 4_3:-64489481 None:intergenic
GTAACGATGATCGGAGGCAT+CGG 0.536695 4_3:-64487642 None:intergenic
TCAACTGGCTTATTCATCTA+CGG 0.537761 4_3:+64493096 Msa0655660:CDS
AGCAGAACATAAGGAAAAGA+GGG 0.539091 4_3:-64490513 None:intergenic
GGAAAAGAGGGCCACAAAAG+AGG 0.539962 4_3:-64490501 None:intergenic
TAACTGAGTGCCGGAACCAA+GGG 0.542563 4_3:-64490092 None:intergenic
TCGGTCCCTTTCACAACCCC+AGG 0.546310 4_3:+64487702 Msa0655660:CDS
ACTTGATGGACCGGTATATG+TGG 0.546448 4_3:-64493266 None:intergenic
ACTACTCACACTTGATGGAC+CGG 0.548206 4_3:-64493275 None:intergenic
GGACAAAGAGCAGGGAGGCA+CGG 0.550307 4_3:-64493242 None:intergenic
GCTGATGATCAAGAGGAGAC+AGG 0.551210 4_3:+64490007 Msa0655660:CDS
GCGCTTGGTGAGGTGTTGAA+TGG 0.553794 4_3:+64489304 Msa0655660:CDS
CCTCTTTACGCCAATAAAGT+CGG 0.554240 4_3:+64487683 Msa0655660:CDS
AAAGAAGCCATAGCAGATGC+AGG 0.557569 4_3:-64493196 None:intergenic
ATGATCAAGAGGAGACAGGA+TGG 0.557782 4_3:+64490011 Msa0655660:CDS
CTCGGGGATATTTAGTAGTG+CGG 0.558407 4_3:-64490693 None:intergenic
AATAAAACATTTAAACCCCA+TGG 0.558783 4_3:-64493500 None:intergenic
AAAGAAAAGACTGAAGCGCT+TGG 0.559289 4_3:+64489289 Msa0655660:CDS
CGTCACACAGGAGTTTATGA+TGG 0.560364 4_3:-64489779 None:intergenic
AGCTTTATTTACTGCACTCG+TGG 0.560606 4_3:+64490287 Msa0655660:CDS
TCGGACCTGGGGTTGTGAAA+GGG 0.563703 4_3:-64487707 None:intergenic
GGATATTTAGTAGTGCGGAC+AGG 0.564998 4_3:-64490688 None:intergenic
GTGCTCCTGTACCAAGGAAG+AGG 0.566138 4_3:-64490724 None:intergenic
CAGGAGCACCATTCCCCAGA+TGG 0.572619 4_3:+64490738 Msa0655660:CDS
ATTCCACCTAACACAAGTAA+TGG 0.572703 4_3:-64490631 None:intergenic
CAGAAGATCATGAATGGTGG+TGG 0.572866 4_3:+64490935 Msa0655660:CDS
AACTGTTGACAAAGAAGGAA+AGG 0.575555 4_3:+64489501 Msa0655660:CDS
AAGATCATGAATGGTGGTGG+AGG 0.577459 4_3:+64490938 Msa0655660:CDS
GCAAATTGTGCCAAAAGGAA+GGG 0.577825 4_3:-64490575 None:intergenic
TACGATGACTTGCCAATCTG+GGG 0.582508 4_3:+64489469 Msa0655660:CDS
ATTATCTAATCTGACAGAGA+AGG 0.583977 4_3:+64487536 Msa0655660:five_prime_UTR
CCATCAAGTGTGAGTAGTTG+TGG 0.589399 4_3:+64493280 Msa0655660:exon
TCCGATCATCGTTACAGCGA+CGG 0.590246 4_3:+64487650 Msa0655660:CDS
TTCCCCAGATGGCAATGGCA+GGG 0.592880 4_3:+64490749 Msa0655660:CDS
TCTGCAAGAAGACGCTCACA+AGG 0.594686 4_3:+64489389 Msa0655660:CDS
AACCCTGCCATTGCCATCTG+GGG 0.595625 4_3:-64490751 None:intergenic
TACCTGTTACACAGAATGGA+AGG 0.596727 4_3:-64487921 None:intergenic
CTCCTGTACCAAGGAAGAGG+TGG 0.597138 4_3:-64490721 None:intergenic
CACCATTCCCCAGATGGCAA+TGG 0.597636 4_3:+64490744 Msa0655660:CDS
CAGAGTGAATAACTGAGTGC+CGG 0.598774 4_3:-64490101 None:intergenic
CAGTGAATCTCCAAGTGATG+TGG 0.599430 4_3:-64489751 None:intergenic
GTTCATAAGGAGCACTAACA+AGG 0.599847 4_3:-64489333 None:intergenic
ATAACTGAGTGCCGGAACCA+AGG 0.601440 4_3:-64490093 None:intergenic
CACAGAATGAGGGTCCATAC+GGG 0.605974 4_3:-64489611 None:intergenic
GGAAGCTGCTGATGATCAAG+AGG 0.608953 4_3:+64490000 Msa0655660:CDS
ACAGGATGGAAGTACATTCA+CGG 0.609901 4_3:+64490025 Msa0655660:CDS
GCCGTCGCTGTAACGATGAT+CGG 0.610207 4_3:-64487651 None:intergenic
GATTGAAATCAGTGCCCGTA+TGG 0.621489 4_3:+64489597 Msa0655660:CDS
TTGCTGCAGAAGATCATGAA+TGG 0.621681 4_3:+64490929 Msa0655660:CDS
GTGCAGTAAATAAAGCTCCT+CGG 0.626601 4_3:-64490281 None:intergenic
CATCATAAACTCCTGTGTGA+CGG 0.630326 4_3:+64489780 Msa0655660:CDS
TTACACAGAATGGAAGGTCA+AGG 0.631427 4_3:-64487915 None:intergenic
GATAGTCCTAATATGGACGC+TGG 0.635172 4_3:+64490600 Msa0655660:CDS
TTTATTGGCGTAAAGAGGAA+CGG 0.635235 4_3:-64487678 None:intergenic
CGAGAAGAGAGATCAGCAGG+TGG 0.635836 4_3:-64487601 None:intergenic
GTATTCTATCCCTACAACCG+AGG 0.642112 4_3:+64490264 Msa0655660:CDS
CAAAAGAAGAACCGTCACAC+AGG 0.644678 4_3:-64489791 None:intergenic
TCAGGTCAACCACAGAATGA+GGG 0.644900 4_3:-64489621 None:intergenic
GGTTGACCTGACTGAGGACA+GGG 0.648121 4_3:+64489633 Msa0655660:CDS
CCGTATGGACCCTCATTCTG+TGG 0.650303 4_3:+64489612 Msa0655660:CDS
AAAGACTGAAGCGCTTGGTG+AGG 0.652344 4_3:+64489294 Msa0655660:CDS
AAGTTGAATATAGAAGGAAG+TGG 0.654133 4_3:-64490349 None:intergenic
CACCAGATATGCTCAAGACG+AGG 0.655302 4_3:+64489979 Msa0655660:intron
TGATGGACCGGTATATGTGG+CGG 0.659080 4_3:-64493263 None:intergenic
GTCGCTGTAACGATGATCGG+AGG 0.669845 4_3:-64487648 None:intergenic
GGCATCGGATCTGACGTGAG+TGG 0.677563 4_3:-64487627 None:intergenic
GGAATGGTGCTCCTGTACCA+AGG 0.679836 4_3:-64490730 None:intergenic
TATGTGGCGGACAAAGAGCA+GGG 0.684805 4_3:-64493250 None:intergenic
GGAAGAGGTGGAATTTCTCG+GGG 0.685340 4_3:-64490709 None:intergenic
CGTCACTGCTTTCATCACTG+TGG 0.690084 4_3:+64490888 Msa0655660:CDS
TTCTGTGGTTGACCTGACTG+AGG 0.695894 4_3:+64489627 Msa0655660:CDS
CTGCAAGAAGACGCTCACAA+GGG 0.699485 4_3:+64489390 Msa0655660:CDS
CTGCAGAAGATCATGAATGG+TGG 0.720682 4_3:+64490932 Msa0655660:CDS
GCAAGTTAATCAGTTCCGAG+AGG 0.727165 4_3:+64489414 Msa0655660:CDS
TGTAGATAGTGTAAATCCTG+TGG 0.748430 4_3:-64490831 None:intergenic
GTGGCGGACAAAGAGCAGGG+AGG 0.771980 4_3:-64493247 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAATAATAGTAATAATT+TGG - chr4_3:64488009-64488028 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491290-64491309 Msa0655660:intron 100.0%
!! ATAATACTAGATCATTAATA+TGG - chr4_3:64487834-64487853 None:intergenic 15.0%
!! TAGTTTATTTAAATCTTGTT+TGG + chr4_3:64488092-64488111 Msa0655660:intron 15.0%
!! AAAGTAGACTAAAAAATTTA+CGG - chr4_3:64488770-64488789 None:intergenic 15.0%
!! ATTAAACTAAATGAGAAAAA+TGG - chr4_3:64488803-64488822 None:intergenic 15.0%
!!! TTTTTAAACTTAAGTTCATA+AGG - chr4_3:64489349-64489368 None:intergenic 15.0%
!! TACAAACTCAAAAATAAATA+TGG - chr4_3:64491154-64491173 None:intergenic 15.0%
!!! TATTTATTTTTGAGTTTGTA+TGG + chr4_3:64491154-64491173 Msa0655660:intron 15.0%
!! ACAAAAGTAAAAAAAAAAAC+TGG + chr4_3:64491818-64491837 Msa0655660:intron 15.0%
!! AACTGATGTATAAAATATAT+GGG - chr4_3:64492447-64492466 None:intergenic 15.0%
!!! TAATTTTTAGCTTAGTATAA+GGG + chr4_3:64492590-64492609 Msa0655660:intron 15.0%
!! TGATGAATATAATAATAGTG+TGG + chr4_3:64488045-64488064 Msa0655660:intron 20.0%
!! AAGTAGACTAAAAAATTTAC+GGG - chr4_3:64488769-64488788 None:intergenic 20.0%
!! TAGTTTAATTAACTCTTGTT+TGG + chr4_3:64488814-64488833 Msa0655660:intron 20.0%
!!! ATTGTTATTTGTTTCAGTTT+TGG + chr4_3:64488852-64488871 Msa0655660:intron 20.0%
!! ATATGTAAATTATAGTCCAA+TGG + chr4_3:64488892-64488911 Msa0655660:intron 20.0%
!!! TTGTTGAAGCTTTTTTTTAA+AGG + chr4_3:64490156-64490175 Msa0655660:intron 20.0%
!! TCAAAAATAAATATGGTGAA+AGG - chr4_3:64491147-64491166 None:intergenic 20.0%
!!! TATTTCTATGATCTTATTCT+AGG - chr4_3:64491447-64491466 None:intergenic 20.0%
!! TGTATCAATGTTTAAAAATC+TGG - chr4_3:64491944-64491963 None:intergenic 20.0%
!! ATTCAGAATGAAAATTTGAA+AGG - chr4_3:64492091-64492110 None:intergenic 20.0%
!! AATAATTAGAGAAAGTAAGA+TGG + chr4_3:64492229-64492248 Msa0655660:intron 20.0%
!! AATTAAAACTGTAACAGATT+TGG + chr4_3:64492307-64492326 Msa0655660:intron 20.0%
!! CAACTGATGTATAAAATATA+TGG - chr4_3:64492448-64492467 None:intergenic 20.0%
!! TACTAAGCTAAAAATTAGTT+AGG - chr4_3:64492587-64492606 None:intergenic 20.0%
!!! CTAATTTTTAGCTTAGTATA+AGG + chr4_3:64492589-64492608 Msa0655660:intron 20.0%
!! ATAAGCTCAAACTTAAATTT+GGG - chr4_3:64492782-64492801 None:intergenic 20.0%
!! AAGGAAAAAAAAAAAACTGT+TGG - chr4_3:64492869-64492888 None:intergenic 20.0%
!! GAAGTAAGCAATAATAAAAT+TGG - chr4_3:64492913-64492932 None:intergenic 20.0%
!! TACTGAACAAATTACTATTA+AGG + chr4_3:64493633-64493652 Msa0655660:three_prime_UTR 20.0%
!! ATGCAATGATTTGTATAGAT+TGG - chr4_3:64488653-64488672 None:intergenic 25.0%
!!! ATTTTTTAGTCTACTTTGTG+TGG + chr4_3:64488773-64488792 Msa0655660:intron 25.0%
! AACAAATCGCTACTAATTTA+CGG + chr4_3:64488981-64489000 Msa0655660:intron 25.0%
! TAAAAAAGAGAAAGACTCTA+CGG + chr4_3:64489363-64489382 Msa0655660:CDS 25.0%
! AGAAAATATTTATACTCGCT+CGG - chr4_3:64489532-64489551 None:intergenic 25.0%
! AATGTTCTATATAGGTGAAT+AGG - chr4_3:64489907-64489926 None:intergenic 25.0%
! TATTCACCTATATAGAACAT+TGG + chr4_3:64489906-64489925 Msa0655660:intron 25.0%
! AATAGACCAATGTTCTATAT+AGG - chr4_3:64489915-64489934 None:intergenic 25.0%
! AAAAAAGCTTCAACAATGAA+GGG - chr4_3:64490152-64490171 None:intergenic 25.0%
! AAAAAAAGCTTCAACAATGA+AGG - chr4_3:64490153-64490172 None:intergenic 25.0%
! ATTACTGTTTGATTGTGAAA+TGG + chr4_3:64490406-64490425 Msa0655660:intron 25.0%
! AATCCAAAATTCGATTATAC+TGG - chr4_3:64491034-64491053 None:intergenic 25.0%
! AAAATAAATATGGTGAAAGG+TGG - chr4_3:64491144-64491163 None:intergenic 25.0%
! ACCATGTGATAACTAATTAA+CGG - chr4_3:64491231-64491250 None:intergenic 25.0%
! TGTGAATATGAATATAGTAC+AGG - chr4_3:64491398-64491417 None:intergenic 25.0%
!!! CAATGTTTTGAAAATCAAAC+TGG + chr4_3:64491751-64491770 Msa0655660:intron 25.0%
!! AAAAAAACTGGTTCAATTAG+CGG + chr4_3:64491830-64491849 Msa0655660:intron 25.0%
! CAATTTGGTTAATTGGATTA+CGG + chr4_3:64491865-64491884 Msa0655660:intron 25.0%
! TGAAAATTTGAAAGGAAGAA+AGG - chr4_3:64492083-64492102 None:intergenic 25.0%
! ATTTAATCTACCCTTCTTAT+GGG - chr4_3:64492275-64492294 None:intergenic 25.0%
!!! ACAGTTTTAATTAGATTCTC+CGG - chr4_3:64492299-64492318 None:intergenic 25.0%
! TAAATGACCCATATTTAGTA+AGG + chr4_3:64492333-64492352 Msa0655660:intron 25.0%
!! CTCTTTTGAATGATATTCTT+TGG + chr4_3:64492524-64492543 Msa0655660:intron 25.0%
! AGCTAAAAATTAGTTAGGTT+TGG - chr4_3:64492582-64492601 None:intergenic 25.0%
! AGTAAAGTGAATTTGGATAA+GGG + chr4_3:64492663-64492682 Msa0655660:intron 25.0%
! CATAAGCTCAAACTTAAATT+TGG - chr4_3:64492783-64492802 None:intergenic 25.0%
! GAATTTAGAAATGCTATGAT+TGG - chr4_3:64492847-64492866 None:intergenic 25.0%
!!! TCTATTTTGTTTGAAAGTAG+AGG + chr4_3:64492956-64492975 Msa0655660:intron 25.0%
! GAAATAACATGACACTAATA+TGG - chr4_3:64493435-64493454 None:intergenic 25.0%
! AATAAAACATTTAAACCCCA+TGG - chr4_3:64493503-64493522 None:intergenic 25.0%
ATTATCTAATCTGACAGAGA+AGG + chr4_3:64487536-64487555 Msa0655660:five_prime_UTR 30.0%
GAGAGAAATTGAAAAGAGAT+CGG - chr4_3:64487729-64487748 None:intergenic 30.0%
! TTTTCCACCGTTTTCAATTT+TGG + chr4_3:64487758-64487777 Msa0655660:intron 30.0%
! TTTCCACCGTTTTCAATTTT+GGG + chr4_3:64487759-64487778 Msa0655660:intron 30.0%
AATTTACCTGTTACACAGAA+TGG - chr4_3:64487928-64487947 None:intergenic 30.0%
!! ATTGTCACTTGTTTCAGTTT+TGG + chr4_3:64488129-64488148 Msa0655660:intron 30.0%
TCAATAGCAAGATGTTTAAC+CGG - chr4_3:64488199-64488218 None:intergenic 30.0%
GTAGCTGAATTTGAACAAAT+CGG + chr4_3:64488254-64488273 Msa0655660:intron 30.0%
! AAATACTGACTATAGCATAG+TGG + chr4_3:64488316-64488335 Msa0655660:intron 30.0%
ATGCTAACCAAAATCATAAG+AGG - chr4_3:64488516-64488535 None:intergenic 30.0%
ATTCTTCTGACTGTTGTAAT+GGG + chr4_3:64488566-64488585 Msa0655660:intron 30.0%
!! TTCATTTTTCTATTGAAGCG+AGG - chr4_3:64488629-64488648 None:intergenic 30.0%
TAACTAGAAAGGAAAACCAT+TGG - chr4_3:64488911-64488930 None:intergenic 30.0%
AGCAAGATGTTTAACTAGAA+AGG - chr4_3:64488922-64488941 None:intergenic 30.0%
GAAAATATTTATACTCGCTC+GGG - chr4_3:64489531-64489550 None:intergenic 30.0%
AGTTTATGTACACAGTGAAA+TGG + chr4_3:64489668-64489687 Msa0655660:intron 30.0%
!! TATTCCTTTTGAGAAGAGAA+TGG + chr4_3:64489702-64489721 Msa0655660:CDS 30.0%
! TTTTCCATTCTCTTCTCAAA+AGG - chr4_3:64489709-64489728 None:intergenic 30.0%
GCAGATAAAAATGAAAAACG+AGG - chr4_3:64489950-64489969 None:intergenic 30.0%
AAGTTGAATATAGAAGGAAG+TGG - chr4_3:64490352-64490371 None:intergenic 30.0%
TCCTTCTATATTCAACTTGA+AGG + chr4_3:64490354-64490373 Msa0655660:CDS 30.0%
CCTTCTATATTCAACTTGAA+GGG + chr4_3:64490355-64490374 Msa0655660:CDS 30.0%
!! ACGTTTATTTTCTTGTTGAC+AGG + chr4_3:64490453-64490472 Msa0655660:intron 30.0%
GAGGTATGTAACTTATCTTA+TGG + chr4_3:64490957-64490976 Msa0655660:intron 30.0%
! TCTCCAGTATAATCGAATTT+TGG + chr4_3:64491028-64491047 Msa0655660:intron 30.0%
TTTCTTCTCATGTCGTTAAT+TGG + chr4_3:64491534-64491553 Msa0655660:intron 30.0%
TTCTTCTCATGTCGTTAATT+GGG + chr4_3:64491535-64491554 Msa0655660:intron 30.0%
ATATACATCACCAAAACTAC+AGG - chr4_3:64491729-64491748 None:intergenic 30.0%
TAATTGGATTACGGTTCAAA+TGG + chr4_3:64491874-64491893 Msa0655660:intron 30.0%
AATTGGATTACGGTTCAAAT+GGG + chr4_3:64491875-64491894 Msa0655660:intron 30.0%
CAATGTTTAAAAATCTGGAC+CGG - chr4_3:64491939-64491958 None:intergenic 30.0%
! TGATACATCTAACCAGATTT+TGG + chr4_3:64491957-64491976 Msa0655660:intron 30.0%
TCAAACAAATCTCCAAAATC+TGG - chr4_3:64491972-64491991 None:intergenic 30.0%
!!! CTTAAGGATCAGTTTTAAAG+AGG + chr4_3:64492121-64492140 Msa0655660:intron 30.0%
TATAAGAATGTTGTGATGTG+TGG + chr4_3:64492173-64492192 Msa0655660:intron 30.0%
ATAAGAATGTTGTGATGTGT+GGG + chr4_3:64492174-64492193 Msa0655660:intron 30.0%
CAATCACATAAGACAAGATT+AGG + chr4_3:64492201-64492220 Msa0655660:intron 30.0%
TTTACAATCACCCATAAGAA+GGG + chr4_3:64492262-64492281 Msa0655660:intron 30.0%
CATTTAATCTACCCTTCTTA+TGG - chr4_3:64492276-64492295 None:intergenic 30.0%
TCCTGAACCTTACTAAATAT+GGG - chr4_3:64492343-64492362 None:intergenic 30.0%
ATCCTGAACCTTACTAAATA+TGG - chr4_3:64492344-64492363 None:intergenic 30.0%
TATTTAGTAAGGTTCAGGAT+AGG + chr4_3:64492344-64492363 Msa0655660:intron 30.0%
!! ATATTCTTTGGTTCTGTATG+TGG + chr4_3:64492536-64492555 Msa0655660:intron 30.0%
!! TATTCTTTGGTTCTGTATGT+GGG + chr4_3:64492537-64492556 Msa0655660:intron 30.0%
AAATTAGTTAGGTTTGGACT+TGG - chr4_3:64492576-64492595 None:intergenic 30.0%
!!! TTTTAGCTTAGTATAAGGGT+AGG + chr4_3:64492594-64492613 Msa0655660:intron 30.0%
! TTTAGCTTAGTATAAGGGTA+GGG + chr4_3:64492595-64492614 Msa0655660:intron 30.0%
TTACTGTCATTGGAAATTTC+TGG - chr4_3:64492648-64492667 None:intergenic 30.0%
CAAATTCACTTTACTGTCAT+TGG - chr4_3:64492658-64492677 None:intergenic 30.0%
CAATGACAGTAAAGTGAATT+TGG + chr4_3:64492656-64492675 Msa0655660:intron 30.0%
CAGTAAAGTGAATTTGGATA+AGG + chr4_3:64492662-64492681 Msa0655660:intron 30.0%
AACAACACAAGAGAAAAACA+TGG + chr4_3:64492702-64492721 Msa0655660:intron 30.0%
ACAACACAAGAGAAAAACAT+GGG + chr4_3:64492703-64492722 Msa0655660:intron 30.0%
GATATTGTTTGTGTTTCCAT+AGG + chr4_3:64493055-64493074 Msa0655660:intron 30.0%
TTCTGTTAGTTAATGAGAGA+AGG + chr4_3:64493330-64493349 Msa0655660:three_prime_UTR 30.0%
CCTACTTTATGACAGAAAAA+AGG - chr4_3:64493372-64493391 None:intergenic 30.0%
!!! CCTTTTTTCTGTCATAAAGT+AGG + chr4_3:64493369-64493388 Msa0655660:three_prime_UTR 30.0%
! TTGACACTTAAGGTAGATTT+TGG + chr4_3:64493475-64493494 Msa0655660:three_prime_UTR 30.0%
AAAGAAGGAAGAGAAGGAAA+TGG + chr4_3:64487559-64487578 Msa0655660:exon 35.0%
AAGAAGGAAGAGAAGGAAAT+GGG + chr4_3:64487560-64487579 Msa0655660:exon 35.0%
!! AAATGGGAAGAAGTGTCTTA+TGG + chr4_3:64487576-64487595 Msa0655660:exon 35.0%
TTTATTGGCGTAAAGAGGAA+CGG - chr4_3:64487681-64487700 None:intergenic 35.0%
CGATGACCCAAAATTGAAAA+CGG - chr4_3:64487768-64487787 None:intergenic 35.0%
!! TCATTAATATGGCGTTGACA+TGG - chr4_3:64487823-64487842 None:intergenic 35.0%
!! ACTTGTTTCAGTTTTGGCAA+TGG + chr4_3:64488135-64488154 Msa0655660:intron 35.0%
! TATTTTCTGCCTTGTGTGAT+TGG + chr4_3:64488355-64488374 Msa0655660:intron 35.0%
AAACTCAATCCAATCACACA+AGG - chr4_3:64488367-64488386 None:intergenic 35.0%
TTTATACCAGAAACCTCTAG+TGG + chr4_3:64488471-64488490 Msa0655660:intron 35.0%
! TTGCAGTCCTCTTATGATTT+TGG + chr4_3:64488506-64488525 Msa0655660:intron 35.0%
CATTCTTCTGACTGTTGTAA+TGG + chr4_3:64488565-64488584 Msa0655660:intron 35.0%
TAACTTATGACACATGCAAG+TGG + chr4_3:64488601-64488620 Msa0655660:intron 35.0%
ACATGAATCTAATGCGAATC+TGG + chr4_3:64488684-64488703 Msa0655660:intron 35.0%
! CTCTTGTTTGGTTGATTACT+TGG + chr4_3:64488826-64488845 Msa0655660:intron 35.0%
GTTATAACACTGTAGAGTAG+CGG + chr4_3:64489049-64489068 Msa0655660:intron 35.0%
ACTATCTGCAATTGACAACA+CGG + chr4_3:64489096-64489115 Msa0655660:intron 35.0%
GCAAGTCATCGTAATACATT+TGG - chr4_3:64489462-64489481 None:intergenic 35.0%
ATTGGAACTGTTGACAAAGA+AGG + chr4_3:64489496-64489515 Msa0655660:CDS 35.0%
AACTGTTGACAAAGAAGGAA+AGG + chr4_3:64489501-64489520 Msa0655660:CDS 35.0%
TATGTACACAGTGAAATGGA+AGG + chr4_3:64489672-64489691 Msa0655660:intron 35.0%
GCAAATATGGACTTGAACTT+AGG - chr4_3:64490067-64490086 None:intergenic 35.0%
!! CTTCATTTTTATGCTTGCAC+TGG + chr4_3:64490236-64490255 Msa0655660:CDS 35.0%
!! ATTTTTATGCTTGCACTGGT+TGG + chr4_3:64490240-64490259 Msa0655660:CDS 35.0%
!! CCCTTCAAGTTGAATATAGA+AGG - chr4_3:64490358-64490377 None:intergenic 35.0%
TTCAACTTGAAGGGACTAAT+TGG + chr4_3:64490364-64490383 Msa0655660:CDS 35.0%
TCAACTTGAAGGGACTAATT+GGG + chr4_3:64490365-64490384 Msa0655660:CDS 35.0%
GTTAGAAACTTATTGCTGAC+AGG + chr4_3:64490475-64490494 Msa0655660:CDS 35.0%
AGCAGAACATAAGGAAAAGA+GGG - chr4_3:64490516-64490535 None:intergenic 35.0%
AAGCAGAACATAAGGAAAAG+AGG - chr4_3:64490517-64490536 None:intergenic 35.0%
TGTTAAGGAAGCAGAACATA+AGG - chr4_3:64490525-64490544 None:intergenic 35.0%
AAGCAATTGCAACTGTGTTA+AGG - chr4_3:64490540-64490559 None:intergenic 35.0%
TTTGCGTGATAGTCCTAATA+TGG + chr4_3:64490593-64490612 Msa0655660:CDS 35.0%
ATTCCACCTAACACAAGTAA+TGG - chr4_3:64490634-64490653 None:intergenic 35.0%
! ACTACATTTTTGCTAGTGTC+TGG + chr4_3:64490806-64490825 Msa0655660:intron 35.0%
! CTACATTTTTGCTAGTGTCT+GGG + chr4_3:64490807-64490826 Msa0655660:intron 35.0%
! TACATTTTTGCTAGTGTCTG+GGG + chr4_3:64490808-64490827 Msa0655660:intron 35.0%
TGTAGATAGTGTAAATCCTG+TGG - chr4_3:64490834-64490853 None:intergenic 35.0%
TTACTACATATCATCTGTGC+CGG + chr4_3:64491205-64491224 Msa0655660:intron 35.0%
TGTGATAACTAATTAACGGC+CGG - chr4_3:64491227-64491246 None:intergenic 35.0%
GCCGTTAATTAGTTATCACA+TGG + chr4_3:64491227-64491246 Msa0655660:intron 35.0%
TAGTTATCACATGGTCTGTT+AGG + chr4_3:64491236-64491255 Msa0655660:intron 35.0%
TTGTCTTCGACTCTATGTAA+TGG + chr4_3:64491269-64491288 Msa0655660:intron 35.0%
TGTCTTCGACTCTATGTAAT+GGG + chr4_3:64491270-64491289 Msa0655660:intron 35.0%
TGAATACATGCTCTATTTGG+TGG - chr4_3:64491639-64491658 None:intergenic 35.0%
CCTTGAATACATGCTCTATT+TGG - chr4_3:64491642-64491661 None:intergenic 35.0%
CCAAATAGAGCATGTATTCA+AGG + chr4_3:64491639-64491658 Msa0655660:intron 35.0%
ATCGTACATGTCACACTTTA+TGG - chr4_3:64491676-64491695 None:intergenic 35.0%
! TACTTCAATGCCTGTAGTTT+TGG + chr4_3:64491716-64491735 Msa0655660:intron 35.0%
CCAATTAACCAAATTGAACC+AGG - chr4_3:64491861-64491880 None:intergenic 35.0%
CCTGGTTCAATTTGGTTAAT+TGG + chr4_3:64491858-64491877 Msa0655660:intron 35.0%
! GAGATTTGTTTGAAAGCCTT+GGG + chr4_3:64491979-64491998 Msa0655660:intron 35.0%
AGGATAACTTCACTATTGCT+GGG - chr4_3:64492051-64492070 None:intergenic 35.0%
AAGGATAACTTCACTATTGC+TGG - chr4_3:64492052-64492071 None:intergenic 35.0%
CTGAATGAATAAGCGACTTA+AGG + chr4_3:64492105-64492124 Msa0655660:intron 35.0%
ATTCTTATATCTGCCACACA+AGG - chr4_3:64492162-64492181 None:intergenic 35.0%
CTTCTTATGGGTGATTGTAA+AGG - chr4_3:64492263-64492282 None:intergenic 35.0%
CTTTACAATCACCCATAAGA+AGG + chr4_3:64492261-64492280 Msa0655660:intron 35.0%
AAGAAGGGTAGATTAAATGC+CGG + chr4_3:64492277-64492296 Msa0655660:intron 35.0%
ACCCATATTTAGTAAGGTTC+AGG + chr4_3:64492339-64492358 Msa0655660:intron 35.0%
TAACCTTGTCTAGTGAGAAT+TGG + chr4_3:64492396-64492415 Msa0655660:intron 35.0%
TACATCAGTTGTGTGTAAAG+TGG + chr4_3:64492457-64492476 Msa0655660:intron 35.0%
! ATTTCTGGATTTGCCCATAT+GGG - chr4_3:64492633-64492652 None:intergenic 35.0%
! AATTTCTGGATTTGCCCATA+TGG - chr4_3:64492634-64492653 None:intergenic 35.0%
TTGGATAAGGGAATTACTCA+AGG + chr4_3:64492675-64492694 Msa0655660:intron 35.0%
TGGATAAGGGAATTACTCAA+GGG + chr4_3:64492676-64492695 Msa0655660:intron 35.0%
CAACACAAGAGAAAAACATG+GGG + chr4_3:64492704-64492723 Msa0655660:intron 35.0%
AACACAAGAGAAAAACATGG+GGG + chr4_3:64492705-64492724 Msa0655660:intron 35.0%
ATACATGAGCTCATATCAAC+AGG - chr4_3:64492806-64492825 None:intergenic 35.0%
AAACATTTCACATCTCAGGA+AGG - chr4_3:64492888-64492907 None:intergenic 35.0%
! TTACCTCAATTGTGTTGACA+TGG + chr4_3:64493009-64493028 Msa0655660:intron 35.0%
! TACCTCAATTGTGTTGACAT+GGG + chr4_3:64493010-64493029 Msa0655660:intron 35.0%
! TTCCATAGGTCTTTTCTTTG+TGG + chr4_3:64493069-64493088 Msa0655660:intron 35.0%
! TCAACTGGCTTATTCATCTA+CGG + chr4_3:64493096-64493115 Msa0655660:CDS 35.0%
ATGCAAACTTCGTTCTTCTT+TGG + chr4_3:64493165-64493184 Msa0655660:CDS 35.0%
! GTAGTTGTGGTTGAATGTTT+TGG + chr4_3:64493293-64493312 Msa0655660:exon 35.0%
TCAAAGCTTCTGTTGTTATC+AGG - chr4_3:64493407-64493426 None:intergenic 35.0%
!!! TAAGGTAGATTTTGGAACCA+TGG + chr4_3:64493483-64493502 Msa0655660:three_prime_UTR 35.0%
!!! AAGGTAGATTTTGGAACCAT+GGG + chr4_3:64493484-64493503 Msa0655660:three_prime_UTR 35.0%
ATCTGACAGAGAAGGAAAGA+AGG + chr4_3:64487544-64487563 Msa0655660:five_prime_UTR 40.0%
AGAAGGAAAGAAGGAAGAGA+AGG + chr4_3:64487553-64487572 Msa0655660:five_prime_UTR 40.0%
CCTCTTTACGCCAATAAAGT+CGG + chr4_3:64487683-64487702 Msa0655660:CDS 40.0%
ATTGAAAAGAGATCGGACCT+GGG - chr4_3:64487722-64487741 None:intergenic 40.0%
AATTGAAAAGAGATCGGACC+TGG - chr4_3:64487723-64487742 None:intergenic 40.0%
TGACCCAAAATTGAAAACGG+TGG - chr4_3:64487765-64487784 None:intergenic 40.0%
!! TAATATGGCGTTGACATGGA+AGG - chr4_3:64487819-64487838 None:intergenic 40.0%
TTACACAGAATGGAAGGTCA+AGG - chr4_3:64487918-64487937 None:intergenic 40.0%
TACCTGTTACACAGAATGGA+AGG - chr4_3:64487924-64487943 None:intergenic 40.0%
ATGTATGCATGAGCTTCATG+AGG - chr4_3:64488073-64488092 None:intergenic 40.0%
AGATCAATGCCTTACCTTTC+CGG + chr4_3:64488177-64488196 Msa0655660:intron 40.0%
GATGTTTAACCGGAAAGGTA+AGG - chr4_3:64488189-64488208 None:intergenic 40.0%
AGCAAGATGTTTAACCGGAA+AGG - chr4_3:64488194-64488213 None:intergenic 40.0%
ATAACATACAACGCCACTAG+AGG - chr4_3:64488487-64488506 None:intergenic 40.0%
GTCATAAGTTACAGACAACC+AGG - chr4_3:64488592-64488611 None:intergenic 40.0%
! ACGGGCTAAACAAAGTTCAA+AGG - chr4_3:64488751-64488770 None:intergenic 40.0%
TTGTCACATAACTGCTACAG+AGG + chr4_3:64489025-64489044 Msa0655660:intron 40.0%
! AAAGAAAAGACTGAAGCGCT+TGG + chr4_3:64489289-64489308 Msa0655660:CDS 40.0%
!! GTTCATAAGGAGCACTAACA+AGG - chr4_3:64489336-64489355 None:intergenic 40.0%
!! AGTCCTTTTTAACTGCCTCT+CGG - chr4_3:64489432-64489451 None:intergenic 40.0%
! ATTACGATGACTTGCCAATC+TGG + chr4_3:64489467-64489486 Msa0655660:CDS 40.0%
! TTACGATGACTTGCCAATCT+GGG + chr4_3:64489468-64489487 Msa0655660:CDS 40.0%
TTGCCAATCTGGGGATTTAT+TGG + chr4_3:64489478-64489497 Msa0655660:CDS 40.0%
GTTCCAATAAATCCCCAGAT+TGG - chr4_3:64489484-64489503 None:intergenic 40.0%
TTCTTCTCTTCCACATCACT+TGG + chr4_3:64489741-64489760 Msa0655660:CDS 40.0%
CATCATAAACTCCTGTGTGA+CGG + chr4_3:64489780-64489799 Msa0655660:CDS 40.0%
!!! TCTTCTTTTGACTGGTTTCC+TGG + chr4_3:64489804-64489823 Msa0655660:CDS 40.0%
! ACAGGATGGAAGTACATTCA+CGG + chr4_3:64490025-64490044 Msa0655660:CDS 40.0%
TGGACTTGAACTTAGGAAAC+CGG - chr4_3:64490060-64490079 None:intergenic 40.0%
AATAAAGCTCCTCGGTTGTA+GGG - chr4_3:64490276-64490295 None:intergenic 40.0%
AAATAAAGCTCCTCGGTTGT+AGG - chr4_3:64490277-64490296 None:intergenic 40.0%
GTGCAGTAAATAAAGCTCCT+CGG - chr4_3:64490284-64490303 None:intergenic 40.0%
!! AGCTTTATTTACTGCACTCG+TGG + chr4_3:64490287-64490306 Msa0655660:CDS 40.0%
GTCATATATGCTCTCACATC+TGG + chr4_3:64490309-64490328 Msa0655660:CDS 40.0%
GCAAATTGTGCCAAAAGGAA+GGG - chr4_3:64490578-64490597 None:intergenic 40.0%
ATCACGCAAATTGTGCCAAA+AGG - chr4_3:64490583-64490602 None:intergenic 40.0%
AAGTTACCAGCGTCCATATT+AGG - chr4_3:64490609-64490628 None:intergenic 40.0%
ACTTCGCCATTACTTGTGTT+AGG + chr4_3:64490625-64490644 Msa0655660:CDS 40.0%
AAGGAAGAGGTGGAATTTCT+CGG - chr4_3:64490714-64490733 None:intergenic 40.0%
! CTATGTAGATGGCACTGAAT+GGG - chr4_3:64490780-64490799 None:intergenic 40.0%
! TCTATGTAGATGGCACTGAA+TGG - chr4_3:64490781-64490800 None:intergenic 40.0%
GTAGTACAGCTCTATGTAGA+TGG - chr4_3:64490791-64490810 None:intergenic 40.0%
TTGCTGCAGAAGATCATGAA+TGG + chr4_3:64490929-64490948 Msa0655660:CDS 40.0%
GTCTTCGACTCTATGTAATG+GGG + chr4_3:64491271-64491290 Msa0655660:intron 40.0%
TCTTCGACTCTATGTAATGG+GGG + chr4_3:64491272-64491291 Msa0655660:intron 40.0%
CATGAGAAGAAAGAGATGAG+TGG - chr4_3:64491526-64491545 None:intergenic 40.0%
AATCAAACTGGCTAGACCTT+CGG + chr4_3:64491763-64491782 Msa0655660:intron 40.0%
! GGAGATTTGTTTGAAAGCCT+TGG + chr4_3:64491978-64491997 Msa0655660:intron 40.0%
GGTTAGGGAGTTTATGTGAT+TGG + chr4_3:64492006-64492025 Msa0655660:intron 40.0%
ACTATTGCTGGGTCACAAAT+TGG - chr4_3:64492040-64492059 None:intergenic 40.0%
AGGAAGAAAGGAGAGAGAAA+AGG - chr4_3:64492071-64492090 None:intergenic 40.0%
! ACACAAAAGTAAGCCTTGTG+TGG + chr4_3:64492146-64492165 Msa0655660:intron 40.0%
GGGTGATTGTAAAGGTCATT+TGG - chr4_3:64492255-64492274 None:intergenic 40.0%
GGATAAGGGAATTACTCAAG+GGG + chr4_3:64492677-64492696 Msa0655660:intron 40.0%
ACACAAGAGAAAAACATGGG+GGG + chr4_3:64492706-64492725 Msa0655660:intron 40.0%
GGACAAACATTTCACATCTC+AGG - chr4_3:64492892-64492911 None:intergenic 40.0%
CACCACAAAGAAAAGACCTA+TGG - chr4_3:64493074-64493093 None:intergenic 40.0%
! CATAGGTCTTTTCTTTGTGG+TGG + chr4_3:64493072-64493091 Msa0655660:intron 40.0%
!! TTTCTTTGTGGTGGATCAAC+TGG + chr4_3:64493081-64493100 Msa0655660:CDS 40.0%
TACGCAAGATCAGATATGTC+TGG + chr4_3:64493138-64493157 Msa0655660:CDS 40.0%
TTCGTTCTTCTTTGGCTACA+TGG + chr4_3:64493173-64493192 Msa0655660:CDS 40.0%
TATGGCTTCTTTCTCATGCT+CGG + chr4_3:64493207-64493226 Msa0655660:CDS 40.0%
TTGCACAAGCTTGACACTTA+AGG + chr4_3:64493465-64493484 Msa0655660:three_prime_UTR 40.0%
!!! AGGTAGATTTTGGAACCATG+GGG + chr4_3:64493485-64493504 Msa0655660:three_prime_UTR 40.0%
CCGACTTTATTGGCGTAAAG+AGG - chr4_3:64487686-64487705 None:intergenic 45.0%
! GTGAAAGGGACCGACTTTAT+TGG - chr4_3:64487696-64487715 None:intergenic 45.0%
TTGAAAAGAGATCGGACCTG+GGG - chr4_3:64487721-64487740 None:intergenic 45.0%
GACCTTCCATTCTGTGTAAC+AGG + chr4_3:64487919-64487938 Msa0655660:CDS 45.0%
! TAGCTGCTGTTTGACAACAC+TGG - chr4_3:64488952-64488971 None:intergenic 45.0%
! CATTCGGACGCACTCATTTT+AGG - chr4_3:64489257-64489276 None:intergenic 45.0%
! GTCTTTTCTTTCTCGTGACC+TGG - chr4_3:64489280-64489299 None:intergenic 45.0%
GCAAGTTAATCAGTTCCGAG+AGG + chr4_3:64489414-64489433 Msa0655660:CDS 45.0%
GTTCCGAGAGGCAGTTAAAA+AGG + chr4_3:64489426-64489445 Msa0655660:intron 45.0%
! TACGATGACTTGCCAATCTG+GGG + chr4_3:64489469-64489488 Msa0655660:CDS 45.0%
GATTGAAATCAGTGCCCGTA+TGG + chr4_3:64489597-64489616 Msa0655660:CDS 45.0%
TCAGGTCAACCACAGAATGA+GGG - chr4_3:64489624-64489643 None:intergenic 45.0%
CAGTGAATCTCCAAGTGATG+TGG - chr4_3:64489754-64489773 None:intergenic 45.0%
CACATCACTTGGAGATTCAC+TGG + chr4_3:64489752-64489771 Msa0655660:CDS 45.0%
CGTCACACAGGAGTTTATGA+TGG - chr4_3:64489782-64489801 None:intergenic 45.0%
CAAAAGAAGAACCGTCACAC+AGG - chr4_3:64489794-64489813 None:intergenic 45.0%
! GTGACGGTTCTTCTTTTGAC+TGG + chr4_3:64489796-64489815 Msa0655660:CDS 45.0%
CTTCAAGACACGCATGAGAA+TGG - chr4_3:64489833-64489852 None:intergenic 45.0%
TTCCTCGTCTTGAGCATATC+TGG - chr4_3:64489984-64490003 None:intergenic 45.0%
ATGATCAAGAGGAGACAGGA+TGG + chr4_3:64490011-64490030 Msa0655660:CDS 45.0%
! ACATTCACGGCGATGTTTTC+CGG + chr4_3:64490038-64490057 Msa0655660:CDS 45.0%
CAGAGTGAATAACTGAGTGC+CGG - chr4_3:64490104-64490123 None:intergenic 45.0%
GTATTCTATCCCTACAACCG+AGG + chr4_3:64490264-64490283 Msa0655660:CDS 45.0%
CGCAAATTGTGCCAAAAGGA+AGG - chr4_3:64490579-64490598 None:intergenic 45.0%
GATAGTCCTAATATGGACGC+TGG + chr4_3:64490600-64490619 Msa0655660:CDS 45.0%
TCGCCATTACTTGTGTTAGG+TGG + chr4_3:64490628-64490647 Msa0655660:intron 45.0%
CTTGTGTTAGGTGGAATTGC+AGG + chr4_3:64490637-64490656 Msa0655660:intron 45.0%
GGATATTTAGTAGTGCGGAC+AGG - chr4_3:64490691-64490710 None:intergenic 45.0%
CTCGGGGATATTTAGTAGTG+CGG - chr4_3:64490696-64490715 None:intergenic 45.0%
AGGAAGAGGTGGAATTTCTC+GGG - chr4_3:64490713-64490732 None:intergenic 45.0%
GAGAAATTCCACCTCTTCCT+TGG + chr4_3:64490713-64490732 Msa0655660:CDS 45.0%
CTGCAGAAGATCATGAATGG+TGG + chr4_3:64490932-64490951 Msa0655660:CDS 45.0%
CAGAAGATCATGAATGGTGG+TGG + chr4_3:64490935-64490954 Msa0655660:CDS 45.0%
!! AAGATCATGAATGGTGGTGG+AGG + chr4_3:64490938-64490957 Msa0655660:CDS 45.0%
! CTTCGACTCTATGTAATGGG+GGG + chr4_3:64491273-64491292 Msa0655660:intron 45.0%
! TTCGACTCTATGTAATGGGG+GGG + chr4_3:64491274-64491293 Msa0655660:intron 45.0%
CACATGCTCCTTGATGTTGA+GGG - chr4_3:64491563-64491582 None:intergenic 45.0%
ACACATGCTCCTTGATGTTG+AGG - chr4_3:64491564-64491583 None:intergenic 45.0%
ATCAAACTGGCTAGACCTTC+GGG + chr4_3:64491764-64491783 Msa0655660:intron 45.0%
GTTCAATTAGCGGTTCAACC+TGG + chr4_3:64491840-64491859 Msa0655660:intron 45.0%
CGGTTCAACCTGGTTCAATT+TGG + chr4_3:64491850-64491869 Msa0655660:intron 45.0%
AAAATCTGGACCGGTTGAAC+CGG - chr4_3:64491930-64491949 None:intergenic 45.0%
TGTTTGAAAGCCTTGGGTGT+AGG + chr4_3:64491985-64492004 Msa0655660:intron 45.0%
AAAGCCTTGGGTGTAGGTTA+GGG + chr4_3:64491991-64492010 Msa0655660:intron 45.0%
ATTGCTGGGTCACAAATTGG+AGG - chr4_3:64492037-64492056 None:intergenic 45.0%
GAGCCAATTCTCACTAGACA+AGG - chr4_3:64492402-64492421 None:intergenic 45.0%
! TGTCTAGTGAGAATTGGCTC+TGG + chr4_3:64492402-64492421 Msa0655660:intron 45.0%
TTAGTATAAGGGTAGGGCCA+TGG + chr4_3:64492601-64492620 Msa0655660:intron 45.0%
GCCATGGTATCAACCCATAT+GGG + chr4_3:64492617-64492636 Msa0655660:intron 45.0%
CTATGATCAGAAACCCCAAG+TGG - chr4_3:64492750-64492769 None:intergenic 45.0%
CACTTGGGGTTTCTGATCAT+AGG + chr4_3:64492748-64492767 Msa0655660:intron 45.0%
CTCCCATGTCAACACAATTG+AGG - chr4_3:64493015-64493034 None:intergenic 45.0%
AAAGAAGCCATAGCAGATGC+AGG - chr4_3:64493199-64493218 None:intergenic 45.0%
TCTTTGTCCGCCACATATAC+CGG + chr4_3:64493256-64493275 Msa0655660:CDS 45.0%
! ACTTGATGGACCGGTATATG+TGG - chr4_3:64493269-64493288 None:intergenic 45.0%
! ACTACTCACACTTGATGGAC+CGG - chr4_3:64493278-64493297 None:intergenic 45.0%
CCACAACTACTCACACTTGA+TGG - chr4_3:64493283-64493302 None:intergenic 45.0%
CCATCAAGTGTGAGTAGTTG+TGG + chr4_3:64493280-64493299 Msa0655660:exon 45.0%
!!! TTTTTTTTTTTTTTTTTTGA+TGG + chr4_3:64488387-64488406 Msa0655660:intron 5.0%
!!! ATTATTATTTTTTTATTTGA+TGG + chr4_3:64489125-64489144 Msa0655660:intron 5.0%
! GTAACGATGATCGGAGGCAT+CGG - chr4_3:64487645-64487664 None:intergenic 50.0%
TCCGATCATCGTTACAGCGA+CGG + chr4_3:64487650-64487669 Msa0655660:CDS 50.0%
ACAACGCCACTAGAGGTTTC+TGG - chr4_3:64488480-64488499 None:intergenic 50.0%
!! TCTGACTGTTGTAATGGGCC+TGG + chr4_3:64488571-64488590 Msa0655660:intron 50.0%
CTTTCTCGTGACCTGGCATT+CGG - chr4_3:64489273-64489292 None:intergenic 50.0%
! AAAGACTGAAGCGCTTGGTG+AGG + chr4_3:64489294-64489313 Msa0655660:CDS 50.0%
TCTGCAAGAAGACGCTCACA+AGG + chr4_3:64489389-64489408 Msa0655660:CDS 50.0%
CTGCAAGAAGACGCTCACAA+GGG + chr4_3:64489390-64489409 Msa0655660:CDS 50.0%
CACAGAATGAGGGTCCATAC+GGG - chr4_3:64489614-64489633 None:intergenic 50.0%
CCACAGAATGAGGGTCCATA+CGG - chr4_3:64489615-64489634 None:intergenic 50.0%
GTCAGGTCAACCACAGAATG+AGG - chr4_3:64489625-64489644 None:intergenic 50.0%
TTCTGTGGTTGACCTGACTG+AGG + chr4_3:64489627-64489646 Msa0655660:CDS 50.0%
CACCAGATATGCTCAAGACG+AGG + chr4_3:64489979-64489998 Msa0655660:intron 50.0%
GGAAGCTGCTGATGATCAAG+AGG + chr4_3:64490000-64490019 Msa0655660:CDS 50.0%
GCTGATGATCAAGAGGAGAC+AGG + chr4_3:64490007-64490026 Msa0655660:CDS 50.0%
TCCATATTTGCAGCTGCCCT+TGG + chr4_3:64490076-64490095 Msa0655660:CDS 50.0%
ACCAAGGGCAGCTGCAAATA+TGG - chr4_3:64490080-64490099 None:intergenic 50.0%
!! TAACTGAGTGCCGGAACCAA+GGG - chr4_3:64490095-64490114 None:intergenic 50.0%
!! ATAACTGAGTGCCGGAACCA+AGG - chr4_3:64490096-64490115 None:intergenic 50.0%
! GCTCTCACATCTGGAATTGC+TGG + chr4_3:64490318-64490337 Msa0655660:CDS 50.0%
! CTGACAGGATGCCTCTTTTG+TGG + chr4_3:64490490-64490509 Msa0655660:CDS 50.0%
GGAAAAGAGGGCCACAAAAG+AGG - chr4_3:64490504-64490523 None:intergenic 50.0%
GGAAGAGGTGGAATTTCTCG+GGG - chr4_3:64490712-64490731 None:intergenic 50.0%
TTCCACCTCTTCCTTGGTAC+AGG + chr4_3:64490719-64490738 Msa0655660:CDS 50.0%
AAACCCTGCCATTGCCATCT+GGG - chr4_3:64490755-64490774 None:intergenic 50.0%
CGTCACTGCTTTCATCACTG+TGG + chr4_3:64490888-64490907 Msa0655660:CDS 50.0%
! TCGACTCTATGTAATGGGGG+GGG + chr4_3:64491275-64491294 Msa0655660:intron 50.0%
ATTGGGCTCCCTCAACATCA+AGG + chr4_3:64491552-64491571 Msa0655660:intron 50.0%
TCAAACTGGCTAGACCTTCG+GGG + chr4_3:64491765-64491784 Msa0655660:intron 50.0%
GTTTGAACCAACCAGCACAC+AGG + chr4_3:64491897-64491916 Msa0655660:intron 50.0%
AAATCTGGACCGGTTGAACC+GGG - chr4_3:64491929-64491948 None:intergenic 50.0%
GAAAGCCTTGGGTGTAGGTT+AGG + chr4_3:64491990-64492009 Msa0655660:intron 50.0%
AACTCCCTAACCTACACCCA+AGG - chr4_3:64491998-64492017 None:intergenic 50.0%
GGCCATGGTATCAACCCATA+TGG + chr4_3:64492616-64492635 Msa0655660:intron 50.0%
!! GCCCATATGGGTTGATACCA+TGG - chr4_3:64492621-64492640 None:intergenic 50.0%
GAAAAACATGGGGGGACTTG+AGG + chr4_3:64492714-64492733 Msa0655660:intron 50.0%
TACATGGCCTGCATCTGCTA+TGG + chr4_3:64493189-64493208 Msa0655660:CDS 50.0%
TTTCTCATGCTCGGTAGCGT+AGG + chr4_3:64493216-64493235 Msa0655660:CDS 50.0%
!! TATGTGGCGGACAAAGAGCA+GGG - chr4_3:64493253-64493272 None:intergenic 50.0%
!! ATATGTGGCGGACAAAGAGC+AGG - chr4_3:64493254-64493273 None:intergenic 50.0%
! TGATGGACCGGTATATGTGG+CGG - chr4_3:64493266-64493285 None:intergenic 50.0%
CGAGAAGAGAGATCAGCAGG+TGG - chr4_3:64487604-64487623 None:intergenic 55.0%
CAGCGAGAAGAGAGATCAGC+AGG - chr4_3:64487607-64487626 None:intergenic 55.0%
GTCGCTGTAACGATGATCGG+AGG - chr4_3:64487651-64487670 None:intergenic 55.0%
GCCGTCGCTGTAACGATGAT+CGG - chr4_3:64487654-64487673 None:intergenic 55.0%
TCGGACCTGGGGTTGTGAAA+GGG - chr4_3:64487710-64487729 None:intergenic 55.0%
ATCGGACCTGGGGTTGTGAA+AGG - chr4_3:64487711-64487730 None:intergenic 55.0%
AATGAGTGCGTCCGAATGCC+AGG + chr4_3:64489259-64489278 Msa0655660:intron 55.0%
!! GCGCTTGGTGAGGTGTTGAA+TGG + chr4_3:64489304-64489323 Msa0655660:CDS 55.0%
CCGTATGGACCCTCATTCTG+TGG + chr4_3:64489612-64489631 Msa0655660:CDS 55.0%
TGGTTGACCTGACTGAGGAC+AGG + chr4_3:64489632-64489651 Msa0655660:CDS 55.0%
GGTTGACCTGACTGAGGACA+GGG + chr4_3:64489633-64489652 Msa0655660:CDS 55.0%
CACGCATGAGAATGGTTGCC+AGG - chr4_3:64489825-64489844 None:intergenic 55.0%
TTTGCAGCTGCCCTTGGTTC+CGG + chr4_3:64490082-64490101 Msa0655660:CDS 55.0%
! GCAACTGCTGCCCTTCCTTT+TGG + chr4_3:64490565-64490584 Msa0655660:CDS 55.0%
TAGTAGTGCGGACAGGTGCT+TGG - chr4_3:64490684-64490703 None:intergenic 55.0%
CTCCTGTACCAAGGAAGAGG+TGG - chr4_3:64490724-64490743 None:intergenic 55.0%
GTGCTCCTGTACCAAGGAAG+AGG - chr4_3:64490727-64490746 None:intergenic 55.0%
GGAATGGTGCTCCTGTACCA+AGG - chr4_3:64490733-64490752 None:intergenic 55.0%
CACCATTCCCCAGATGGCAA+TGG + chr4_3:64490744-64490763 Msa0655660:CDS 55.0%
TGCCATTGCCATCTGGGGAA+TGG - chr4_3:64490749-64490768 None:intergenic 55.0%
ATTCCCCAGATGGCAATGGC+AGG + chr4_3:64490748-64490767 Msa0655660:CDS 55.0%
TTCCCCAGATGGCAATGGCA+GGG + chr4_3:64490749-64490768 Msa0655660:CDS 55.0%
AACCCTGCCATTGCCATCTG+GGG - chr4_3:64490754-64490773 None:intergenic 55.0%
GAAACCCTGCCATTGCCATC+TGG - chr4_3:64490756-64490775 None:intergenic 55.0%
! CGACTCTATGTAATGGGGGG+GGG + chr4_3:64491276-64491295 Msa0655660:intron 55.0%
! GACTCTATGTAATGGGGGGG+GGG + chr4_3:64491277-64491296 Msa0655660:intron 55.0%
! ACTCTATGTAATGGGGGGGG+GGG + chr4_3:64491278-64491297 Msa0655660:intron 55.0%
CAGTTCAACCATCACCCCGA+AGG - chr4_3:64491782-64491801 None:intergenic 55.0%
! CTTCGGGGTGATGGTTGAAC+TGG + chr4_3:64491780-64491799 Msa0655660:intron 55.0%
GATCAGAAACCCCAAGTGGC+AGG - chr4_3:64492746-64492765 None:intergenic 55.0%
! GGCATCGGATCTGACGTGAG+TGG - chr4_3:64487630-64487649 None:intergenic 60.0%
TCGGTCCCTTTCACAACCCC+AGG + chr4_3:64487702-64487721 Msa0655660:CDS 60.0%
CCACTTCCCTGTCCTCAGTC+AGG - chr4_3:64489642-64489661 None:intergenic 60.0%
CCTGACTGAGGACAGGGAAG+TGG + chr4_3:64489639-64489658 Msa0655660:CDS 60.0%
!! CAGGAGCACCATTCCCCAGA+TGG + chr4_3:64490738-64490757 Msa0655660:CDS 60.0%
! TTGCTAGTGTCTGGGGCCAC+AGG + chr4_3:64490815-64490834 Msa0655660:intron 60.0%
! CTCTATGTAATGGGGGGGGG+GGG + chr4_3:64491279-64491298 Msa0655660:intron 60.0%
! TCTATGTAATGGGGGGGGGG+GGG + chr4_3:64491280-64491299 Msa0655660:intron 60.0%
TGGCTAGACCTTCGGGGTGA+TGG + chr4_3:64491771-64491790 Msa0655660:intron 60.0%
! GAAGCAGCCTGTGTGCTGGT+TGG - chr4_3:64491907-64491926 None:intergenic 60.0%
AGGCTGCTTCCCGGTTCAAC+CGG + chr4_3:64491917-64491936 Msa0655660:intron 60.0%
AAACCCCAAGTGGCAGGCCA+AGG - chr4_3:64492740-64492759 None:intergenic 60.0%
GGACAAAGAGCAGGGAGGCA+CGG - chr4_3:64493245-64493264 None:intergenic 60.0%
! CTATGTAATGGGGGGGGGGG+GGG + chr4_3:64491281-64491300 Msa0655660:intron 65.0%
! TATGTAATGGGGGGGGGGGG+GGG + chr4_3:64491282-64491301 Msa0655660:intron 65.0%
CCAGCACACAGGCTGCTTCC+CGG + chr4_3:64491908-64491927 Msa0655660:intron 65.0%
CATGGGGGGACTTGAGGCCT+TGG + chr4_3:64492720-64492739 Msa0655660:intron 65.0%
TGAGGCCTTGGCCTGCCACT+TGG + chr4_3:64492732-64492751 Msa0655660:intron 65.0%
! GAGGCCTTGGCCTGCCACTT+GGG + chr4_3:64492733-64492752 Msa0655660:intron 65.0%
! AGGCCTTGGCCTGCCACTTG+GGG + chr4_3:64492734-64492753 Msa0655660:intron 65.0%
!! GTGGCGGACAAAGAGCAGGG+AGG - chr4_3:64493250-64493269 None:intergenic 65.0%
! ATGTAATGGGGGGGGGGGGG+GGG + chr4_3:64491283-64491302 Msa0655660:intron 70.0%
CCGGGAAGCAGCCTGTGTGC+TGG - chr4_3:64491911-64491930 None:intergenic 70.0%
! TGTAATGGGGGGGGGGGGGG+GGG + chr4_3:64491284-64491303 Msa0655660:intron 75.0%
!! GTAATGGGGGGGGGGGGGGG+GGG + chr4_3:64491285-64491304 Msa0655660:intron 80.0%
! TAATGGGGGGGGGGGGGGGG+GGG + chr4_3:64491286-64491305 Msa0655660:intron 80.0%
! AATGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491287-64491306 Msa0655660:intron 85.0%
! ATGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491288-64491307 Msa0655660:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr4_3:64491289-64491308 Msa0655660:intron 95.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 64487471 64493671 64487471 ID=Msa0655660;Name=Msa0655660
chr4_3 mRNA 64487471 64493671 64487471 ID=Msa0655660-mRNA-1;Parent=Msa0655660;Name=Msa0655660-mRNA-1;_AED=0.04;_eAED=0.04;_QI=107|0.6|0.45|1|0.5|0.36|11|375|573
chr4_3 exon 64487471 64487723 64487471 ID=Msa0655660-mRNA-1:exon:18239;Parent=Msa0655660-mRNA-1
chr4_3 exon 64487900 64487940 64487900 ID=Msa0655660-mRNA-1:exon:18240;Parent=Msa0655660-mRNA-1
chr4_3 exon 64489281 64489438 64489281 ID=Msa0655660-mRNA-1:exon:18241;Parent=Msa0655660-mRNA-1
chr4_3 exon 64489448 64489681 64489448 ID=Msa0655660-mRNA-1:exon:18242;Parent=Msa0655660-mRNA-1
chr4_3 exon 64489694 64489866 64489694 ID=Msa0655660-mRNA-1:exon:18243;Parent=Msa0655660-mRNA-1
chr4_3 exon 64489985 64490122 64489985 ID=Msa0655660-mRNA-1:exon:18244;Parent=Msa0655660-mRNA-1
chr4_3 exon 64490230 64490386 64490230 ID=Msa0655660-mRNA-1:exon:18245;Parent=Msa0655660-mRNA-1
chr4_3 exon 64490475 64490646 64490475 ID=Msa0655660-mRNA-1:exon:18246;Parent=Msa0655660-mRNA-1
chr4_3 exon 64490659 64490803 64490659 ID=Msa0655660-mRNA-1:exon:18247;Parent=Msa0655660-mRNA-1
chr4_3 exon 64490822 64490959 64490822 ID=Msa0655660-mRNA-1:exon:18248;Parent=Msa0655660-mRNA-1
chr4_3 exon 64493077 64493671 64493077 ID=Msa0655660-mRNA-1:exon:18249;Parent=Msa0655660-mRNA-1
chr4_3 five_prime_UTR 64487471 64487577 64487471 ID=Msa0655660-mRNA-1:five_prime_utr;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64487578 64487723 64487578 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64487900 64487940 64487900 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64489281 64489438 64489281 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64489448 64489681 64489448 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64489694 64489866 64489694 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64489985 64490122 64489985 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64490230 64490386 64490230 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64490475 64490646 64490475 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64490659 64490803 64490659 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64490822 64490959 64490822 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 CDS 64493077 64493296 64493077 ID=Msa0655660-mRNA-1:cds;Parent=Msa0655660-mRNA-1
chr4_3 three_prime_UTR 64493297 64493671 64493297 ID=Msa0655660-mRNA-1:three_prime_utr;Parent=Msa0655660-mRNA-1
Gene Sequence

>Msa0655660

ATGGGAAGAAGTGTCTTATGGATCCACCTGCTGATCTCTCTTCTCGCTGCCACTCACGTCAGATCCGATGCCTCCGATCATCGTTACAGCGACGGCGATGCCGTTCCTCTTTACGCCAATAAAGTCGGTCCCTTTCACAACCCCAGTGAAACGTATCGTTACCTTGACCTTCCATTCTGTGTAACAGGTCACGAGAAAGAAAAGACTGAAGCGCTTGGTGAGGTGTTGAATGGAGATCGCCTTGTTAGTGCTCCTTATGAACTTAAGTTTAAAAAAGAGAAAGACTCTACGGTTGTCTGCAAGAAGACGCTCACAAGGGAGCAAGTTAATCAGTTCCGAGAGGCAGACTATTATTTCCAAATGTATTACGATGACTTGCCAATCTGGGGATTTATTGGAACTGTTGACAAAGAAGGAAAGGCAGACCCGAGCGAGTATAAATATTTTCTTTACAAGCACATTCAGTTTGATGTTCTGTACAACAAAGATCGTGTGATTGAAATCAGTGCCCGTATGGACCCTCATTCTGTGGTTGACCTGACTGAGGACAGGGAAGTGGATGTTGAGTTTATGTACACAGAAACTGATATTCCTTTTGAGAAGAGAATGGAAAAATACTCTCAGTCTTCTTCTCTTCCACATCACTTGGAGATTCACTGGTTCTCCATCATAAACTCCTGTGTGACGGTTCTTCTTTTGACTGGTTTCCTGGCAACCATTCTCATGCGTGTCTTGAAGAATGATTTTATGAAATATGCTCAAGACGAGGAAGCTGCTGATGATCAAGAGGAGACAGGATGGAAGTACATTCACGGCGATGTTTTCCGGTTTCCTAAGTTCAAGTCCATATTTGCAGCTGCCCTTGGTTCCGGCACTCAGTTATTCACTCTCACAATCTTCATTTTTATGCTTGCACTGGTTGGTGTATTCTATCCCTACAACCGAGGAGCTTTATTTACTGCACTCGTGGTCATATATGCTCTCACATCTGGAATTGCTGGATATACTGCCACTTCCTTCTATATTCAACTTGAAGGGACTAATTGGGTTAGAAACTTATTGCTGACAGGATGCCTCTTTTGTGGCCCTCTTTTCCTTATGTTCTGCTTCCTTAACACAGTTGCAATTGCTTATAGTGCAACTGCTGCCCTTCCTTTTGGCACAATTTGCGTGATAGTCCTAATATGGACGCTGGTAACTTCGCCATTACTTGTGTTAGGTAAAAATAGCAAAACAGAGTTCCAAGCACCTGTCCGCACTACTAAATATCCCCGAGAAATTCCACCTCTTCCTTGGTACAGGAGCACCATTCCCCAGATGGCAATGGCAGGGTTTCTCCCATTCAGTGCCATCTACATAGAGCTTGTCTGGGGCCACAGGATTTACACTATCTACAGCATACTCTTCATCGTCTTTATTATTCTGTTGATCGTCACTGCTTTCATCACTGTGGCTTTGACATACTTTCAACTTGCTGCAGAAGATCATGAATGGTGGTGGAGGTCTTTTCTTTGTGGTGGATCAACTGGCTTATTCATCTACGGCTACTGCTTGTATTATTACTACGCAAGATCAGATATGTCTGGTTTTATGCAAACTTCGTTCTTCTTTGGCTACATGGCCTGCATCTGCTATGGCTTCTTTCTCATGCTCGGTAGCGTAGGTTTCCGTGCCTCCCTGCTCTTTGTCCGCCACATATACCGGTCCATCAAGTGTGAGTAG
Protein sequence

>Msa0655660

MGRSVLWIHLLISLLAATHVRSDASDHRYSDGDAVPLYANKVGPFHNPSETYRYLDLPFCVTGHEKEKTEALGEVLNGDRLVSAPYELKFKKEKDSTVVCKKTLTREQVNQFREADYYFQMYYDDLPIWGFIGTVDKEGKADPSEYKYFLYKHIQFDVLYNKDRVIEISARMDPHSVVDLTEDREVDVEFMYTETDIPFEKRMEKYSQSSSLPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFMKYAQDEEAADDQEETGWKYIHGDVFRFPKFKSIFAAALGSGTQLFTLTIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIAGYTATSFYIQLEGTNWVRNLLLTGCLFCGPLFLMFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTSPLLVLGKNSKTEFQAPVRTTKYPREIPPLPWYRSTIPQMAMAGFLPFSAIYIELVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE*