AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0207320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207320 MtrunA17_Chr3g0121241 80.000 330 18 10 1 309 2 304 1.82e-170 474
Msa0207320 MtrunA17_Chr7g0275911 79.310 116 24 0 40 155 4 119 2.04e-68 214
Msa0207320 MtrunA17_Chr4g0070611 76.991 113 26 0 40 152 4 116 2.25e-64 205
Msa0207320 MtrunA17_Chr4g0037141 66.923 130 43 0 40 169 4 133 4.44e-64 203
Msa0207320 MtrunA17_Chr8g0349261 56.140 171 73 2 40 208 4 174 4.63e-64 204
Msa0207320 MtrunA17_Chr4g0070641 76.991 113 26 0 40 152 4 116 1.35e-63 198
Msa0207320 MtrunA17_Chr8g0346561 73.451 113 30 0 40 152 4 116 7.82e-63 201
Msa0207320 MtrunA17_Chr7g0217741 65.152 132 46 0 40 171 4 135 1.52e-61 197
Msa0207320 MtrunA17_Chr2g0281071 67.460 126 40 1 40 164 4 129 5.76e-61 197
Msa0207320 MtrunA17_Chr4g0039971 66.400 125 42 0 40 164 5 129 1.50e-60 196
Msa0207320 MtrunA17_Chr3g0131121 65.649 131 45 0 40 170 4 134 1.91e-60 194
Msa0207320 MtrunA17_Chr4g0042671 68.000 125 40 0 40 164 4 128 3.58e-60 197
Msa0207320 MtrunA17_Chr4g0048511 66.667 126 41 1 40 164 4 129 7.05e-60 195
Msa0207320 MtrunA17_Chr3g0115821 65.600 125 43 0 40 164 4 128 1.10e-59 194
Msa0207320 MtrunA17_Chr2g0323411 66.400 125 42 0 40 164 4 128 2.31e-59 192
Msa0207320 MtrunA17_Chr6g0453471 66.142 127 43 0 40 166 4 130 5.09e-59 192
Msa0207320 MtrunA17_Chr4g0068061 69.912 113 34 0 40 152 4 116 6.40e-59 192
Msa0207320 MtrunA17_Chr5g0410961 65.600 125 43 0 40 164 4 128 7.13e-59 192
Msa0207320 MtrunA17_Chr5g0435101 65.041 123 43 0 41 163 4 126 8.82e-59 187
Msa0207320 MtrunA17_Chr1g0187761 69.027 113 35 0 40 152 4 116 8.02e-58 186
Msa0207320 MtrunA17_Chr4g0057031 65.873 126 43 0 41 166 5 130 2.16e-57 186
Msa0207320 MtrunA17_Chr7g0274581 46.154 195 86 6 41 231 5 184 3.12e-57 183
Msa0207320 MtrunA17_Chr1g0194951 66.667 126 37 1 40 160 4 129 3.30e-57 188
Msa0207320 MtrunA17_Chr8g0385321 61.240 129 50 0 40 168 4 132 1.50e-56 185
Msa0207320 MtrunA17_Chr1g0167661 66.667 114 38 0 41 154 5 118 1.91e-56 183
Msa0207320 MtrunA17_Chr5g0434571 66.400 125 42 0 41 165 41 165 2.26e-56 186
Msa0207320 MtrunA17_Chr5g0395281 61.600 125 48 0 40 164 4 128 1.01e-55 182
Msa0207320 MtrunA17_Chr3g0110351 65.079 126 44 0 41 166 5 130 1.28e-55 182
Msa0207320 MtrunA17_Chr4g0058631 62.903 124 46 0 42 165 6 129 2.28e-55 183
Msa0207320 MtrunA17_Chr4g0044421 66.116 121 41 0 42 162 6 126 4.54e-55 177
Msa0207320 MtrunA17_Chr1g0167691 65.487 113 39 0 41 153 5 117 4.57e-55 179
Msa0207320 MtrunA17_Chr1g0203411 68.142 113 36 0 40 152 4 116 6.38e-55 180
Msa0207320 MtrunA17_Chr7g0228891 64.800 125 44 0 41 165 5 129 3.67e-54 177
Msa0207320 MtrunA17_Chr7g0261281 41.304 230 99 4 40 256 4 210 8.20e-54 177
Msa0207320 MtrunA17_Chr7g0270891 62.205 127 48 0 42 168 6 132 1.49e-53 179
Msa0207320 MtrunA17_Chr1g0193371 62.205 127 48 0 42 168 6 132 1.62e-53 179
Msa0207320 MtrunA17_Chr3g0103281 55.245 143 64 0 41 183 5 147 2.19e-53 177
Msa0207320 MtrunA17_Chr1g0193801 61.417 127 49 0 42 168 6 132 2.40e-53 179
Msa0207320 MtrunA17_Chr3g0117091 62.097 124 47 0 42 165 6 129 4.67e-53 177
Msa0207320 MtrunA17_Chr1g0211161 62.097 124 47 0 42 165 7 130 6.05e-53 173
Msa0207320 MtrunA17_Chr6g0452271 58.594 128 53 0 41 168 5 132 2.72e-52 174
Msa0207320 MtrunA17_Chr2g0309911 58.730 126 52 0 42 167 5 130 2.16e-51 172
Msa0207320 MtrunA17_Chr7g0269831 69.027 113 35 0 40 152 4 116 3.69e-51 172
Msa0207320 MtrunA17_Chr8g0343831 67.925 106 34 0 50 155 10 115 1.59e-50 167
Msa0207320 MtrunA17_Chr4g0055981 60.317 126 47 1 29 151 33 158 7.22e-50 165
Msa0207320 MtrunA17_Chr7g0254411 60.331 121 46 1 41 159 5 125 8.49e-50 168
Msa0207320 MtrunA17_Chr3g0092401 60.833 120 45 1 41 158 6 125 3.97e-49 166
Msa0207320 MtrunA17_Chr7g0271241 62.097 124 47 0 42 165 6 129 6.22e-49 167
Msa0207320 MtrunA17_Chr4g0060721 53.435 131 55 1 41 165 6 136 1.53e-48 165
Msa0207320 MtrunA17_Chr4g0022901 37.500 272 156 7 40 305 4 267 4.22e-48 162
Msa0207320 MtrunA17_Chr7g0220341 57.600 125 50 2 46 168 23 146 6.66e-48 161
Msa0207320 MtrunA17_Chr2g0330041 49.677 155 69 2 42 187 6 160 1.30e-47 164
Msa0207320 MtrunA17_Chr7g0217221 61.607 112 43 0 41 152 5 116 1.39e-47 160
Msa0207320 MtrunA17_Chr4g0022911 37.945 253 116 5 40 262 4 245 2.32e-47 160
Msa0207320 MtrunA17_Chr5g0434931 60.360 111 44 0 47 157 34 144 3.78e-47 160
Msa0207320 MtrunA17_Chr4g0022931 60.526 114 44 1 40 152 4 117 7.57e-47 159
Msa0207320 MtrunA17_Chr5g0434911 58.407 113 47 0 43 155 16 128 1.27e-46 158
Msa0207320 MtrunA17_Chr4g0022891 47.879 165 78 3 40 196 4 168 2.43e-46 156
Msa0207320 MtrunA17_Chr7g0228991 62.385 109 41 0 47 155 28 136 3.51e-46 157
Msa0207320 MtrunA17_Chr5g0417821 57.143 119 51 0 46 164 5 123 3.65e-46 157
Msa0207320 MtrunA17_Chr1g0151941 39.035 228 124 6 40 261 4 222 7.38e-46 155
Msa0207320 MtrunA17_Chr2g0323351 58.772 114 47 0 40 153 4 117 8.11e-46 155
Msa0207320 MtrunA17_Chr8g0342521 57.627 118 50 0 42 159 6 123 8.19e-46 158
Msa0207320 MtrunA17_Chr8g0387421 59.459 111 45 0 42 152 6 116 9.58e-46 157
Msa0207320 MtrunA17_Chr8g0342541 52.672 131 61 1 42 172 6 135 1.19e-45 157
Msa0207320 MtrunA17_Chr7g0264641 56.522 115 49 1 40 153 4 118 1.35e-45 155
Msa0207320 MtrunA17_Chr4g0028311 58.261 115 47 1 40 153 4 118 1.67e-45 157
Msa0207320 MtrunA17_Chr5g0434831 63.551 107 39 0 47 153 6 112 1.85e-45 152
Msa0207320 MtrunA17_Chr3g0135311 56.410 117 50 1 40 155 4 120 2.31e-45 157
Msa0207320 MtrunA17_Chr2g0327351 48.765 162 74 5 41 199 5 160 2.49e-45 156
Msa0207320 MtrunA17_Chr6g0453211 59.813 107 43 0 41 147 5 111 4.73e-45 155
Msa0207320 MtrunA17_Chr2g0311221 61.111 108 42 0 40 147 6 113 5.05e-45 155
Msa0207320 MtrunA17_Chr5g0400821 55.556 117 51 1 40 155 4 120 5.10e-45 155
Msa0207320 MtrunA17_Chr7g0240821 64.356 101 36 0 52 152 5 105 7.29e-45 152
Msa0207320 MtrunA17_Chr1g0209661 50.340 147 69 1 26 168 1 147 1.56e-44 154
Msa0207320 MtrunA17_Chr5g0434841 62.617 107 40 0 47 153 19 125 2.17e-44 154
Msa0207320 MtrunA17_Chr1g0152011 54.701 117 52 1 40 155 4 120 2.98e-44 154
Msa0207320 MtrunA17_Chr8g0360111 63.107 103 38 0 47 149 24 126 3.55e-44 151
Msa0207320 MtrunA17_Chr4g0032401 48.980 147 68 1 48 187 17 163 3.73e-44 153
Msa0207320 MtrunA17_Chr1g0168661 63.208 106 39 0 49 154 22 127 8.15e-44 150
Msa0207320 MtrunA17_Chr5g0397231 60.000 105 42 0 42 146 6 110 1.10e-43 152
Msa0207320 MtrunA17_Chr1g0186061 64.078 103 37 0 49 151 21 123 1.88e-43 149
Msa0207320 MtrunA17_Chr4g0022881 51.449 138 60 1 40 170 4 141 2.99e-43 148
Msa0207320 MtrunA17_Chr7g0247131 52.713 129 61 0 80 208 10 138 9.48e-43 148
Msa0207320 MtrunA17_Chr3g0088461 58.716 109 45 0 44 152 18 126 1.12e-42 150
Msa0207320 MtrunA17_Chr2g0328771 58.879 107 44 0 48 154 20 126 1.20e-42 149
Msa0207320 MtrunA17_Chr8g0342481 51.515 132 62 2 42 172 6 136 3.15e-42 150
Msa0207320 MtrunA17_Chr2g0294811 67.416 89 29 0 40 128 4 92 5.27e-42 141
Msa0207320 MtrunA17_Chr7g0228231 60.952 105 41 0 48 152 14 118 1.21e-41 143
Msa0207320 MtrunA17_Chr6g0487491 51.220 123 51 2 40 153 4 126 1.63e-41 144
Msa0207320 MtrunA17_Chr4g0054391 57.009 107 45 1 40 145 4 110 1.73e-41 145
Msa0207320 MtrunA17_Chr8g0354661 58.491 106 44 0 46 151 35 140 1.81e-41 150
Msa0207320 MtrunA17_Chr6g0450101 60.000 105 42 0 48 152 14 118 5.88e-41 141
Msa0207320 MtrunA17_Chr6g0470971 50.000 136 61 2 43 178 9 137 7.06e-41 143
Msa0207320 MtrunA17_Chr3g0080861 57.547 106 45 0 46 151 35 140 1.22e-40 148
Msa0207320 MtrunA17_Chr4g0072751 55.556 108 47 1 40 146 4 111 1.48e-40 144
Msa0207320 MtrunA17_Chr1g0203441 53.846 117 53 1 49 165 14 129 2.83e-40 141
Msa0207320 MtrunA17_Chr1g0194291 59.813 107 43 0 45 151 18 124 9.22e-40 140
Msa0207320 MtrunA17_Chr1g0194301 57.692 104 44 0 48 151 33 136 6.88e-39 138
Msa0207320 MtrunA17_Chr2g0322521 54.630 108 49 0 44 151 25 132 1.65e-38 140
Msa0207320 MtrunA17_Chr3g0099131 55.769 104 46 0 48 151 41 144 1.74e-38 142
Msa0207320 MtrunA17_Chr1g0180391 57.273 110 46 1 48 156 19 128 1.91e-38 135
Msa0207320 MtrunA17_Chr1g0154031 55.769 104 46 0 48 151 76 179 2.29e-38 140
Msa0207320 MtrunA17_Chr1g0192411 48.387 124 58 1 46 163 10 133 6.37e-37 136
Msa0207320 MtrunA17_Chr2g0327821 55.769 104 46 0 48 151 6 109 1.24e-36 131
Msa0207320 MtrunA17_Chr2g0293911 56.800 125 48 1 26 150 8 126 1.65e-36 133
Msa0207320 MtrunA17_Chr4g0042611 63.529 85 31 0 40 124 4 88 2.75e-36 125
Msa0207320 MtrunA17_Chr4g0068921 64.078 103 37 0 48 150 24 126 5.54e-36 128
Msa0207320 MtrunA17_Chr4g0030881 38.095 210 110 5 49 248 8 207 5.78e-36 130
Msa0207320 MtrunA17_Chr5g0395221 60.227 88 35 0 37 124 1 88 9.18e-34 119
Msa0207320 MtrunA17_Chr5g0440781 45.536 112 59 2 49 159 13 123 5.28e-31 115
Msa0207320 MtrunA17_Chr5g0441141 45.536 112 59 2 49 159 13 123 1.63e-30 116
Msa0207320 MtrunA17_Chr5g0440761 45.536 112 59 2 49 159 13 123 1.98e-30 115
Msa0207320 MtrunA17_Chr7g0229101 73.529 68 18 0 81 148 5 72 3.27e-30 113
Msa0207320 MtrunA17_Chr2g0323321 57.609 92 38 1 37 128 1 91 3.58e-30 110
Msa0207320 MtrunA17_Chr8g0342531 58.333 84 35 0 42 125 6 89 1.14e-29 110
Msa0207320 MtrunA17_Chr5g0441131 46.296 108 57 1 44 150 5 112 1.55e-29 111
Msa0207320 MtrunA17_Chr8g0342511 59.756 82 33 0 42 123 6 87 3.38e-29 107
Msa0207320 MtrunA17_Chr7g0229131 64.384 73 26 0 81 153 5 77 1.10e-28 108
Msa0207320 MtrunA17_Chr5g0434901 72.308 65 18 0 84 148 9 73 1.42e-28 106
Msa0207320 MtrunA17_Chr3g0099141 50.588 85 42 0 48 132 40 124 1.33e-27 104
Msa0207320 MtrunA17_Chr8g0342461 55.294 85 37 1 42 125 6 90 1.43e-27 104
Msa0207320 MtrunA17_Chr8g0342471 55.294 85 37 1 42 125 6 90 2.89e-27 103
Msa0207320 MtrunA17_Chr8g0334881 46.000 100 53 1 48 146 10 109 2.89e-27 108
Msa0207320 MtrunA17_Chr5g0401731 44.828 116 63 1 50 165 15 129 1.13e-26 107
Msa0207320 MtrunA17_Chr3g0093811 53.409 88 41 0 81 168 15 102 1.72e-26 105
Msa0207320 MtrunA17_Chr4g0013361 42.373 118 64 2 48 164 10 124 2.47e-26 105
Msa0207320 MtrunA17_Chr6g0454921 35.673 171 98 4 50 219 15 174 3.78e-26 102
Msa0207320 MtrunA17_Chr4g0053431 47.059 102 53 1 50 151 5 105 2.81e-25 102
Msa0207320 MtrunA17_Chr4g0008551 47.115 104 54 1 50 153 38 140 3.58e-25 103
Msa0207320 MtrunA17_Chr7g0238631 45.714 105 56 1 48 152 111 214 4.55e-24 102
Msa0207320 MtrunA17_Chr5g0429661 38.168 131 80 1 16 146 88 217 5.63e-24 100
Msa0207320 MtrunA17_Chr1g0157731 41.905 105 60 1 48 152 89 192 1.05e-23 101
Msa0207320 MtrunA17_Chr3g0133601 44.118 102 56 1 50 151 37 137 4.50e-23 95.1
Msa0207320 MtrunA17_Chr4g0058991 38.333 120 71 2 28 146 187 304 4.60e-23 98.6
Msa0207320 MtrunA17_Chr3g0139671 41.905 105 60 1 48 152 83 186 6.16e-23 99.4
Msa0207320 MtrunA17_Chr6g0480581 41.584 101 58 1 50 150 4 103 3.90e-22 92.8
Msa0207320 MtrunA17_Chr3g0117511 38.235 102 62 1 45 146 178 278 6.48e-22 95.5
Msa0207320 MtrunA17_Chr4g0042501 37.815 119 73 1 50 168 105 222 1.02e-21 94.7
Msa0207320 MtrunA17_Chr5g0417621 39.623 106 63 1 50 155 134 238 1.04e-21 94.7
Msa0207320 MtrunA17_Chr6g0453751 47.826 92 39 2 47 129 19 110 1.05e-21 89.0
Msa0207320 MtrunA17_Chr5g0425591 44.828 87 47 1 44 129 5 91 5.99e-21 85.5
Msa0207320 MtrunA17_Chr5g0397841 43.878 98 54 1 48 145 108 204 1.33e-20 91.7
Msa0207320 MtrunA17_Chr3g0125801 42.157 102 58 1 50 151 16 116 2.42e-20 89.0
Msa0207320 MtrunA17_Chr5g0437321 42.424 99 56 1 50 148 19 116 2.90e-20 89.0
Msa0207320 MtrunA17_Chr7g0228531 33.333 129 75 3 18 146 197 314 2.76e-19 87.8
Msa0207320 MtrunA17_Chr6g0460661 40.426 94 55 1 53 146 19 111 3.90e-19 82.8
Msa0207320 MtrunA17_Chr7g0238651 36.441 118 67 2 50 159 7 124 7.99e-19 85.9
Msa0207320 MtrunA17_Chr7g0254261 37.069 116 72 1 50 165 89 203 2.69e-18 84.3
Msa0207320 MtrunA17_Chr8g0362231 30.973 226 136 8 53 267 25 241 5.59e-18 84.0
Msa0207320 MtrunA17_Chr6g0460671 39.216 102 61 1 50 151 99 199 9.15e-18 82.8
Msa0207320 MtrunA17_Chr5g0434871 68.889 45 14 0 110 154 2 46 2.09e-17 75.5
Msa0207320 MtrunA17_Chr7g0228401 40.698 86 50 1 61 146 290 374 4.33e-17 81.6
Msa0207320 MtrunA17_Chr3g0145551 62.745 51 19 0 127 177 1 51 1.10e-16 73.9
Msa0207320 MtrunA17_Chr7g0247141 66.667 45 14 1 40 83 4 48 1.24e-16 73.2
Msa0207320 MtrunA17_Chr1g0177901 37.931 87 53 1 60 146 4 89 5.66e-16 75.5
Msa0207320 MtrunA17_Chr2g0322831 70.000 40 12 0 105 144 33 72 1.31e-15 70.9
Msa0207320 MtrunA17_Chr7g0233061 31.206 141 80 4 8 146 148 273 2.08e-15 75.9
Msa0207320 MtrunA17_Chr7g0228481 33.663 101 65 2 46 146 216 314 3.57e-15 75.5
Msa0207320 MtrunA17_Chr5g0416341 35.354 99 63 1 53 151 29 126 4.38e-15 75.5
Msa0207320 MtrunA17_Chr5g0395231 60.784 51 20 0 114 164 5 55 9.58e-15 72.8
Msa0207320 MtrunA17_Chr1g0193901 50.000 58 28 1 48 104 11 68 4.56e-14 67.4
Msa0207320 MtrunA17_Chr1g0193891 50.000 58 28 1 48 104 11 68 4.56e-14 67.4
Msa0207320 MtrunA17_Chr1g0193871 50.000 58 28 1 48 104 11 68 4.56e-14 67.4
Msa0207320 MtrunA17_Chr1g0193881 50.000 58 28 1 48 104 11 68 4.56e-14 67.4
Msa0207320 MtrunA17_Chr5g0434891 63.636 44 16 0 113 156 1 44 2.37e-13 66.6
Msa0207320 MtrunA17_Chr2g0288361 51.111 45 22 0 105 149 28 72 3.83e-13 63.9
Msa0207320 MtrunA17_Chr4g0042621 70.732 41 12 0 124 164 14 54 5.34e-13 68.6
Msa0207320 MtrunA17_Chr4g0024181 57.143 42 18 0 105 146 27 68 5.14e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207320 AT3G13540.1 56.667 240 71 7 35 270 10 220 2.87e-86 259
Msa0207320 AT3G61250.1 67.391 138 45 0 40 177 4 141 1.52e-66 211
Msa0207320 AT4G38620.1 56.977 172 66 2 40 211 4 167 3.00e-64 204
Msa0207320 AT4G21440.1 55.357 168 58 3 40 190 4 171 3.34e-63 204
Msa0207320 AT4G09460.1 64.122 131 47 0 40 170 4 134 3.88e-62 197
Msa0207320 AT1G22640.1 63.910 133 47 1 40 171 4 136 5.28e-62 197
Msa0207320 AT2G16720.1 66.142 127 43 0 40 166 4 130 3.22e-61 196
Msa0207320 AT5G16770.4 67.200 125 41 0 40 164 4 128 8.19e-61 197
Msa0207320 AT5G16770.3 67.200 125 41 0 40 164 4 128 8.19e-61 197
Msa0207320 AT3G02940.2 67.200 125 41 0 40 164 4 128 1.53e-60 196
Msa0207320 AT5G16770.1 67.200 125 41 0 40 164 4 128 1.78e-60 196
Msa0207320 AT5G16770.2 67.200 125 41 0 40 164 4 128 1.78e-60 196
Msa0207320 AT4G28110.1 64.800 125 44 0 40 164 4 128 2.46e-60 194
Msa0207320 AT5G60890.1 58.000 150 54 1 40 180 4 153 2.71e-60 194
Msa0207320 AT5G10280.1 43.966 232 120 3 40 266 4 230 2.95e-60 196
Msa0207320 AT1G35515.1 61.194 134 52 0 40 173 4 137 3.11e-60 191
Msa0207320 AT3G02940.1 67.200 125 41 0 40 164 4 128 3.16e-60 195
Msa0207320 AT3G02940.3 67.200 125 41 0 40 164 4 128 3.16e-60 195
Msa0207320 AT5G15310.4 66.142 127 43 0 40 166 4 130 7.14e-60 192
Msa0207320 AT4G34990.1 60.839 143 56 0 40 182 4 146 8.17e-60 192
Msa0207320 AT5G15310.1 66.142 127 43 0 40 166 4 130 8.50e-60 194
Msa0207320 AT5G15310.2 66.142 127 43 0 40 166 4 130 9.73e-60 194
Msa0207320 AT5G49330.1 72.566 113 31 0 40 152 4 116 1.39e-59 194
Msa0207320 AT4G05100.1 65.079 126 43 1 40 164 4 129 9.62e-59 191
Msa0207320 AT2G47460.1 63.571 140 49 1 40 179 4 141 1.13e-58 192
Msa0207320 AT3G01140.2 66.935 124 41 0 40 163 4 127 1.13e-58 192
Msa0207320 AT3G01140.1 58.219 146 61 0 18 163 25 170 1.19e-58 193
Msa0207320 AT5G61420.2 58.108 148 54 1 41 188 5 144 2.92e-58 191
Msa0207320 AT1G74080.1 47.716 197 92 2 40 236 4 189 3.88e-58 190
Msa0207320 AT4G12350.1 64.615 130 46 0 41 170 5 134 6.04e-58 188
Msa0207320 AT1G34670.1 63.235 136 46 1 40 175 4 135 9.13e-58 190
Msa0207320 AT4G22680.1 65.079 126 44 0 41 166 5 130 1.65e-57 186
Msa0207320 AT5G07690.1 61.832 131 50 0 41 171 5 135 1.66e-57 188
Msa0207320 AT4G17785.2 65.079 126 43 1 40 164 4 129 2.67e-57 188
Msa0207320 AT4G17785.1 65.079 126 43 1 40 164 4 129 3.44e-57 188
Msa0207320 AT2G31180.1 47.938 194 94 2 40 230 4 193 6.94e-57 184
Msa0207320 AT1G18570.1 64.341 129 45 1 40 167 4 132 7.72e-57 187
Msa0207320 AT5G54230.1 58.667 150 58 2 48 196 12 158 1.92e-56 185
Msa0207320 AT1G66230.1 64.844 128 45 0 41 168 5 132 2.89e-56 184
Msa0207320 AT1G06180.1 68.750 112 35 0 41 152 5 116 1.61e-55 181
Msa0207320 AT3G23250.1 63.415 123 44 1 40 161 4 126 1.63e-55 182
Msa0207320 AT3G62610.1 69.912 113 34 0 40 152 4 116 1.80e-55 183
Msa0207320 AT5G16600.1 65.600 125 43 0 41 165 5 129 2.05e-55 183
Msa0207320 AT1G57560.1 62.205 127 48 0 42 168 6 132 3.80e-55 182
Msa0207320 AT5G65230.1 62.400 125 47 0 40 164 4 128 5.35e-55 181
Msa0207320 AT5G07700.1 61.240 129 50 0 41 169 5 133 7.85e-55 182
Msa0207320 AT5G07700.2 61.240 129 50 0 41 169 5 133 7.85e-55 182
Msa0207320 AT5G26660.1 64.516 124 44 0 42 165 6 129 1.78e-54 181
Msa0207320 AT1G57560.2 62.903 124 46 0 42 165 6 129 3.44e-54 178
Msa0207320 AT5G14340.1 62.500 128 48 0 41 168 17 144 7.14e-54 177
Msa0207320 AT5G56110.1 55.556 144 64 0 40 183 4 147 1.04e-53 178
Msa0207320 AT1G09540.1 60.465 129 51 0 42 170 6 134 1.68e-53 179
Msa0207320 AT4G01680.3 62.016 129 49 0 42 170 6 134 2.25e-53 175
Msa0207320 AT4G01680.1 62.016 129 49 0 42 170 6 134 3.98e-53 177
Msa0207320 AT5G14750.1 69.231 104 32 0 49 152 17 120 9.00e-52 169
Msa0207320 AT1G08810.1 41.277 235 109 5 41 255 5 230 8.51e-51 169
Msa0207320 AT3G27920.1 53.103 145 67 1 49 192 15 159 1.09e-50 167
Msa0207320 AT1G74430.1 61.864 118 45 0 47 164 11 128 2.51e-50 168
Msa0207320 AT1G16490.1 62.832 113 42 0 40 152 6 118 2.85e-50 168
Msa0207320 AT5G35550.1 70.476 105 31 0 48 152 14 118 3.77e-50 167
Msa0207320 AT5G40330.1 67.308 104 34 0 49 152 13 116 4.62e-50 166
Msa0207320 AT4G01680.2 56.738 141 49 1 42 170 6 146 1.27e-49 168
Msa0207320 AT5G62320.1 55.970 134 52 1 41 167 6 139 1.92e-49 165
Msa0207320 AT1G66370.1 68.571 105 33 0 47 151 7 111 2.64e-49 164
Msa0207320 AT1G56160.1 63.717 113 41 0 40 152 6 118 3.91e-49 166
Msa0207320 AT3G47600.1 57.812 128 44 1 41 158 5 132 4.65e-49 166
Msa0207320 AT3G12720.1 57.025 121 52 0 42 162 16 136 5.93e-49 166
Msa0207320 AT1G74650.1 61.062 113 44 0 41 153 5 117 1.16e-48 165
Msa0207320 AT1G18710.1 57.983 119 50 0 47 165 11 129 1.36e-48 163
Msa0207320 AT5G52600.1 66.346 104 35 0 48 151 12 115 2.04e-48 160
Msa0207320 AT3G12820.1 61.207 116 45 0 40 155 6 121 4.41e-48 161
Msa0207320 AT1G79180.1 61.062 113 44 0 40 152 6 118 8.75e-48 162
Msa0207320 AT3G28910.1 61.538 117 43 1 41 155 5 121 1.07e-47 162
Msa0207320 AT5G62470.2 61.607 112 43 0 41 152 5 116 1.21e-47 163
Msa0207320 AT3G28470.1 54.545 132 60 0 41 172 5 136 1.05e-46 160
Msa0207320 AT3G13890.2 59.821 112 45 0 42 153 6 117 2.17e-46 160
Msa0207320 AT4G37780.1 56.410 117 50 1 40 155 4 120 2.26e-46 159
Msa0207320 AT3G49690.1 57.265 117 49 1 40 155 4 120 2.70e-46 159
Msa0207320 AT3G30210.1 66.346 104 35 0 47 150 26 129 2.76e-46 157
Msa0207320 AT5G62470.1 61.607 112 42 1 41 152 5 115 3.30e-46 159
Msa0207320 AT1G63910.1 58.559 111 46 0 42 152 6 116 3.52e-45 157
Msa0207320 AT2G32460.1 57.391 115 49 0 37 151 7 121 5.20e-45 159
Msa0207320 AT5G65790.1 55.556 117 51 1 40 155 4 120 5.92e-45 157
Msa0207320 AT5G23000.1 57.391 115 48 1 40 153 4 118 9.18e-45 155
Msa0207320 AT5G55020.1 59.821 112 44 1 46 157 24 134 1.25e-44 159
Msa0207320 AT5G57620.1 57.391 115 48 1 40 153 4 118 1.58e-44 155
Msa0207320 AT4G13480.1 66.990 103 34 0 49 151 7 109 1.69e-44 152
Msa0207320 AT3G24310.1 64.762 105 37 0 47 151 17 121 3.53e-44 152
Msa0207320 AT2G32460.2 60.000 105 42 0 47 151 5 109 5.46e-44 157
Msa0207320 AT2G36890.1 54.839 124 55 1 40 162 4 127 7.16e-44 152
Msa0207320 AT2G36890.2 50.685 146 68 2 21 162 23 168 7.82e-44 153
Msa0207320 AT5G12870.1 60.952 105 41 0 48 152 18 122 9.13e-44 151
Msa0207320 AT1G66380.1 69.444 108 33 0 44 151 4 111 1.02e-43 146
Msa0207320 AT1G25340.1 48.611 144 74 0 49 192 19 162 1.43e-43 151
Msa0207320 AT3G13890.1 55.372 121 45 1 42 153 6 126 2.08e-43 152
Msa0207320 AT3G08500.1 61.905 105 40 0 48 152 30 134 4.23e-43 151
Msa0207320 AT1G56650.1 69.444 108 33 0 44 151 4 111 4.89e-43 148
Msa0207320 AT1G66390.1 69.444 108 33 0 44 151 4 111 1.22e-42 147
Msa0207320 AT5G40350.1 58.716 109 45 0 48 156 17 125 2.13e-42 145
Msa0207320 AT4G26930.1 56.250 112 48 1 46 157 17 127 2.48e-42 150
Msa0207320 AT1G68320.1 54.472 123 56 0 48 170 19 141 6.72e-42 146
Msa0207320 AT3G27810.1 55.963 109 48 0 44 152 16 124 2.87e-41 143
Msa0207320 AT1G79180.2 47.260 146 44 1 40 152 6 151 6.13e-41 145
Msa0207320 AT3G01530.1 57.143 105 45 0 48 152 25 129 2.22e-40 140
Msa0207320 AT1G48000.1 55.000 120 52 1 46 163 30 149 4.95e-40 140
Msa0207320 AT5G06100.1 54.286 105 48 0 47 151 31 135 1.99e-39 144
Msa0207320 AT1G25340.2 46.528 144 72 1 49 192 19 157 2.23e-39 140
Msa0207320 AT5G14750.3 78.205 78 14 1 75 152 12 86 3.42e-39 136
Msa0207320 AT3G53200.1 61.538 104 40 0 48 151 9 112 4.36e-39 138
Msa0207320 AT5G26660.2 70.115 87 26 0 79 165 12 98 6.14e-39 140
Msa0207320 AT1G25340.3 46.528 144 72 1 49 192 19 157 6.40e-39 139
Msa0207320 AT3G11440.2 54.808 104 47 0 48 151 41 144 8.00e-39 142
Msa0207320 AT5G06100.5 54.286 105 48 0 47 151 31 135 8.05e-39 143
Msa0207320 AT5G06100.2 54.286 105 48 0 47 151 31 135 8.05e-39 143
Msa0207320 AT5G06100.3 54.286 105 48 0 47 151 31 135 8.05e-39 143
Msa0207320 AT5G06100.4 54.286 105 48 0 47 151 31 135 8.05e-39 143
Msa0207320 AT2G47190.1 55.769 104 46 0 48 151 20 123 1.15e-38 138
Msa0207320 AT3G11440.3 54.808 104 47 0 48 151 41 144 3.93e-38 142
Msa0207320 AT3G11440.4 54.808 104 47 0 48 151 41 144 3.93e-38 142
Msa0207320 AT3G11440.1 54.808 104 47 0 48 151 41 144 3.93e-38 142
Msa0207320 AT3G46130.1 57.143 105 45 0 47 151 8 112 1.13e-37 135
Msa0207320 AT4G25560.1 57.143 105 45 0 49 153 11 115 1.49e-37 135
Msa0207320 AT5G59780.3 57.282 103 44 0 49 151 9 111 3.45e-37 133
Msa0207320 AT3G06490.1 64.151 106 38 0 45 150 16 121 8.84e-37 134
Msa0207320 AT3G48920.1 46.715 137 68 1 44 180 14 145 3.44e-36 131
Msa0207320 AT2G26960.1 51.327 113 54 1 45 157 17 128 1.87e-35 133
Msa0207320 AT5G35550.2 77.778 72 16 0 81 152 50 121 4.38e-35 128
Msa0207320 AT5G49620.1 58.559 111 46 0 40 150 18 128 5.20e-34 126
Msa0207320 AT5G52260.1 55.238 105 47 0 49 153 13 117 5.94e-34 125
Msa0207320 AT1G22640.3 64.557 79 27 1 94 171 1 79 8.69e-32 117
Msa0207320 AT5G49620.2 53.333 120 42 1 45 150 23 142 1.85e-30 117
Msa0207320 AT3G46130.4 59.783 92 33 1 60 151 3 90 5.76e-30 114
Msa0207320 AT5G59780.2 59.783 92 33 1 60 151 3 90 1.20e-29 112
Msa0207320 AT3G53200.2 67.123 73 24 0 79 151 7 79 1.44e-29 112
Msa0207320 AT1G71030.2 62.338 77 29 0 87 163 5 81 1.83e-29 111
Msa0207320 AT3G12820.2 64.384 73 26 0 83 155 1 73 1.83e-29 111
Msa0207320 AT2G26950.1 46.667 105 56 0 42 146 10 114 2.25e-29 115
Msa0207320 AT1G71030.1 62.338 77 29 0 87 163 19 95 2.53e-29 111
Msa0207320 AT1G66380.3 76.389 72 17 0 80 151 7 78 1.11e-28 106
Msa0207320 AT3G47600.2 60.227 88 25 1 81 158 39 126 1.40e-28 112
Msa0207320 AT3G46130.3 64.103 78 28 0 74 151 3 80 1.56e-28 110
Msa0207320 AT5G40350.2 61.842 76 29 0 81 156 5 80 1.90e-28 108
Msa0207320 AT5G14750.4 77.966 59 13 0 94 152 1 59 4.89e-28 106
Msa0207320 AT5G14750.2 77.966 59 13 0 94 152 1 59 4.89e-28 106
Msa0207320 AT3G27810.2 62.500 72 27 0 81 152 4 75 6.00e-28 107
Msa0207320 AT3G60460.1 47.115 104 54 1 45 147 8 111 1.14e-27 109
Msa0207320 AT1G18960.1 40.945 127 69 3 42 168 5 125 3.89e-27 108
Msa0207320 AT1G66380.2 62.353 85 32 0 44 128 4 88 2.19e-26 100
Msa0207320 AT3G09230.1 44.954 109 51 2 50 154 55 158 2.33e-25 105
Msa0207320 AT1G69560.1 36.620 142 89 1 27 168 84 224 2.56e-25 103
Msa0207320 AT1G69560.2 36.620 142 89 1 27 168 100 240 3.85e-25 103
Msa0207320 AT5G02320.1 45.714 105 56 1 48 152 125 228 6.89e-25 105
Msa0207320 AT5G02320.2 45.714 105 56 1 48 152 125 228 6.89e-25 105
Msa0207320 AT5G02320.3 45.714 105 56 1 48 152 65 168 1.08e-24 103
Msa0207320 AT2G39880.1 47.170 106 55 1 50 155 50 154 2.54e-24 101
Msa0207320 AT5G11510.3 43.810 105 58 1 48 152 79 182 2.65e-24 103
Msa0207320 AT5G11510.1 43.810 105 58 1 48 152 79 182 2.65e-24 103
Msa0207320 AT5G11510.4 43.810 105 58 1 48 152 79 182 2.65e-24 103
Msa0207320 AT5G11510.5 43.810 105 58 1 48 152 79 182 3.41e-24 103
Msa0207320 AT5G11510.2 43.810 105 58 1 48 152 79 182 3.65e-24 103
Msa0207320 AT4G18770.1 36.364 143 80 3 45 179 212 351 3.80e-24 102
Msa0207320 AT3G55730.1 46.078 102 54 1 50 151 56 156 7.63e-24 100
Msa0207320 AT5G40360.1 30.481 187 107 5 48 231 156 322 3.99e-23 98.2
Msa0207320 AT3G23250.2 64.407 59 21 0 94 152 1 59 1.11e-22 94.4
Msa0207320 AT3G09370.1 44.444 108 51 2 48 151 128 230 1.17e-22 98.2
Msa0207320 AT3G09370.2 44.444 108 51 2 48 151 133 235 1.24e-22 98.2
Msa0207320 AT1G17950.1 43.137 102 57 1 50 151 5 105 1.46e-22 94.7
Msa0207320 AT3G09370.3 44.444 108 51 2 48 151 141 243 1.88e-22 97.8
Msa0207320 AT5G58850.1 43.434 99 55 1 48 146 103 200 2.08e-22 97.1
Msa0207320 AT1G26780.1 41.346 104 60 1 48 151 96 198 5.17e-22 94.0
Msa0207320 AT1G26780.2 41.346 104 60 1 48 151 96 198 5.59e-22 95.1
Msa0207320 AT3G27785.1 40.196 102 60 1 45 146 184 284 8.15e-22 95.5
Msa0207320 AT4G37260.1 42.056 107 61 1 50 156 13 118 9.89e-22 94.0
Msa0207320 AT4G32730.1 35.556 135 82 2 48 178 85 218 1.24e-21 95.9
Msa0207320 AT4G32730.5 35.556 135 82 2 48 178 85 218 1.42e-21 95.5
Msa0207320 AT4G32730.4 35.556 135 82 2 48 178 85 218 1.42e-21 95.5
Msa0207320 AT4G32730.3 35.556 135 82 2 48 178 85 218 1.42e-21 95.5
Msa0207320 AT4G32730.2 35.556 135 82 2 48 178 85 218 1.42e-21 95.5
Msa0207320 AT2G23290.1 42.453 106 52 2 50 151 13 113 2.21e-21 92.8
Msa0207320 AT5G67300.1 44.118 102 56 1 50 151 6 106 3.00e-21 92.0
Msa0207320 AT3G50060.1 43.137 102 57 1 50 151 6 106 5.76e-21 91.3
Msa0207320 AT5G11050.1 42.268 97 55 1 50 146 105 200 7.00e-21 92.8
Msa0207320 AT1G73410.1 43.689 103 55 2 50 151 6 106 1.87e-20 89.0
Msa0207320 AT3G29020.1 35.616 146 86 3 12 155 30 169 2.18e-20 88.2
Msa0207320 AT3G29020.2 35.616 146 86 3 12 155 32 171 3.04e-20 89.4
Msa0207320 AT1G73410.2 43.689 103 55 2 50 151 6 106 1.01e-19 85.9
Msa0207320 AT5G17800.1 39.286 112 62 2 40 151 88 193 1.29e-19 87.8
Msa0207320 AT4G33450.1 36.937 111 64 2 41 151 15 119 1.86e-19 86.3
Msa0207320 AT5G61420.1 58.333 72 22 1 117 188 2 65 9.46e-19 85.1
Msa0207320 AT2G25230.1 35.135 111 71 1 36 146 12 121 2.36e-18 82.8
Msa0207320 AT4G00540.2 40.741 108 60 2 48 152 101 207 6.28e-18 84.0
Msa0207320 AT4G00540.1 40.741 108 60 2 48 152 99 205 1.24e-17 83.2
Msa0207320 AT1G22640.2 69.388 49 14 1 124 171 16 64 1.57e-17 79.3
Msa0207320 AT2G02820.3 32.624 141 82 3 53 181 33 172 1.87e-17 82.0
Msa0207320 AT2G02820.1 32.624 141 82 3 53 181 33 172 2.00e-17 82.8
Msa0207320 AT2G02820.2 32.624 141 82 3 53 181 33 172 3.60e-17 82.0
Msa0207320 AT2G37630.1 36.190 105 65 1 49 151 3 107 3.86e-17 81.3
Msa0207320 AT1G14350.2 29.139 151 100 2 53 197 28 177 1.82e-15 77.0
Msa0207320 AT1G14350.1 29.139 151 100 2 53 197 28 177 1.82e-15 77.0
Msa0207320 AT5G40430.1 30.827 133 90 2 14 146 18 148 2.35e-15 74.7
Msa0207320 AT4G28110.2 70.732 41 12 0 124 164 4 44 4.09e-15 73.2
Msa0207320 AT5G15310.3 68.085 47 15 0 120 166 5 51 6.39e-15 73.6
Msa0207320 AT5G39700.1 35.238 105 67 1 51 155 57 160 2.33e-14 70.9
Msa0207320 AT5G59780.1 65.217 46 16 0 106 151 1 46 2.71e-14 70.1
Msa0207320 AT3G46130.2 65.217 46 16 0 106 151 1 46 3.09e-14 70.5
Msa0207320 AT4G25560.2 60.417 48 19 0 106 153 2 49 1.03e-13 69.7
Msa0207320 AT2G30420.1 43.590 78 36 1 106 183 40 109 1.31e-13 66.6
Msa0207320 AT1G74650.3 65.854 41 14 0 113 153 1 41 2.93e-12 65.9
Msa0207320 AT5G14340.2 60.000 45 18 0 124 168 10 54 3.16e-12 64.7
Msa0207320 AT2G46410.1 60.000 40 16 0 105 144 37 76 4.65e-12 61.6
Msa0207320 AT3G28910.2 64.444 45 14 1 113 155 1 45 6.85e-12 64.7
Msa0207320 AT1G01380.1 61.538 39 15 0 106 144 34 72 2.49e-11 59.3
Msa0207320 AT5G53200.1 65.714 35 12 0 110 144 37 71 3.20e-11 59.7
Msa0207320 AT1G74430.2 50.000 52 26 0 113 164 8 59 6.30e-11 61.2
Msa0207320 AT4G01060.3 58.974 39 16 0 106 144 33 71 7.07e-11 57.8

Find 61 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATGTGTTTACTTCATTTC+TGG 0.117632 2_1:-38024109 Msa0207320:CDS
AAGCTTTCCCGTCTTGGTTT+TGG 0.183376 2_1:+38023965 None:intergenic
ATTAAGAGGCTTATGAGTTC+TGG 0.273499 2_1:+38024392 None:intergenic
CGGAGAAGACCAGCACGTTT+TGG 0.283330 2_1:+38024814 None:intergenic
ATAGTATAATTAGTAGTAAT+TGG 0.300605 2_1:+38024306 None:intergenic
CTCCGCCTCCACCGTCTTCT+CGG 0.361745 2_1:-38024700 Msa0207320:CDS
ATCTCATTATCAGTTCTTCC+TGG 0.373269 2_1:+38024471 None:intergenic
AACAACAACAGAGGGGATTA+TGG 0.374480 2_1:-38024162 Msa0207320:CDS
TTGATAGCTGGGAGAATTCC+AGG 0.377223 2_1:-38024489 Msa0207320:CDS
TGCTGCACCACCAGCTTTGT+GGG 0.386603 2_1:-38024022 Msa0207320:CDS
CTGCTGCACCACCAGCTTTG+TGG 0.390612 2_1:-38024023 Msa0207320:CDS
ATCATGAAGCTTTCCCGTCT+TGG 0.395480 2_1:+38023959 None:intergenic
TTAAGAGGCTTATGAGTTCT+GGG 0.408909 2_1:+38024393 None:intergenic
ATAATCCCCTCTGTTGTTGT+TGG 0.419997 2_1:+38024164 None:intergenic
TCTTGATCTGTTGAAGAAGA+AGG 0.445888 2_1:+38025036 None:intergenic
TTATTCAACACAACAAGCTC+AGG 0.453173 2_1:-38024241 Msa0207320:CDS
TCCACCGTCTTCTCGGCAAC+AGG 0.456243 2_1:-38024693 Msa0207320:intron
GACAGTAGTAATAACAATTA+CGG 0.457012 2_1:-38024138 Msa0207320:CDS
CGAGAAGACGGTGGAGGCGG+AGG 0.459091 2_1:+38024701 None:intergenic
ACACCTTGTTGCAGTAAAGT+AGG 0.463550 2_1:-38024925 Msa0207320:CDS
GGAGTATTAACACTATTAAG+AGG 0.464809 2_1:+38024378 None:intergenic
TTCAGGTGGTCATTGATAGC+TGG 0.466971 2_1:-38024501 Msa0207320:intron
TCATCTTCTTCTGCAGTCCA+TGG 0.467738 2_1:+38024889 None:intergenic
ATCTGACCGCGTTTGACGGA+TGG 0.470830 2_1:+38024748 None:intergenic
AGGATGAGATCTTCTTCATC+AGG 0.478655 2_1:+38024721 None:intergenic
AGCGATCTGACCGCGTTTGA+CGG 0.486754 2_1:+38024744 None:intergenic
GATGAGAGGGATCATCAGAT+TGG 0.496562 2_1:+38024274 None:intergenic
AGTTAATGATGTTTCTGCAA+TGG 0.502787 2_1:-38024205 Msa0207320:CDS
TGCCGAGAAGACGGTGGAGG+CGG 0.507780 2_1:+38024698 None:intergenic
GCAAAAGCTGTCGTCTCCGT+TGG 0.511001 2_1:-38024786 Msa0207320:CDS
TCAGGTGGTCATTGATAGCT+GGG 0.518141 2_1:-38024500 Msa0207320:intron
GAGTTCTGGGATCAATCCCT+TGG 0.522632 2_1:+38024406 None:intergenic
CACCTTGTTGCAGTAAAGTA+GGG 0.522983 2_1:-38024924 Msa0207320:CDS
TCTGACCGCGTTTGACGGAT+GGG 0.542989 2_1:+38024749 None:intergenic
AGAACTCTCCCAAAACGTGC+TGG 0.544230 2_1:-38024823 Msa0207320:CDS
GCAGAAGATGATGCAAAGAA+AGG 0.545398 2_1:+38024357 None:intergenic
ATTTCACCCAAAACCAAGAC+GGG 0.547074 2_1:-38023972 Msa0207320:CDS
AGCGGCGATTCCCACAAAGC+TGG 0.550946 2_1:+38024012 None:intergenic
TGCTTACCAACAACAACAGA+GGG 0.561719 2_1:-38024170 Msa0207320:CDS
AGCAAGAAACTTATTAACCA+AGG 0.562069 2_1:-38024423 Msa0207320:CDS
GCAAGAAACTTATTAACCAA+GGG 0.569477 2_1:-38024422 Msa0207320:CDS
ATAATGATTATTATGATGAG+AGG 0.570926 2_1:+38024260 None:intergenic
TGTTGCCGAGAAGACGGTGG+AGG 0.589049 2_1:+38024695 None:intergenic
TAATGATTATTATGATGAGA+GGG 0.594985 2_1:+38024261 None:intergenic
GGCGAAGATAATTCATCCAA+CGG 0.603593 2_1:+38024770 None:intergenic
TATACCTGTTGCCGAGAAGA+CGG 0.604478 2_1:+38024689 None:intergenic
GGCGATTCCCACAAAGCTGG+TGG 0.607315 2_1:+38024015 None:intergenic
TGTTGATGATGATCAGAAAG+AGG 0.618206 2_1:+38024333 None:intergenic
AATTTCACCCAAAACCAAGA+CGG 0.622349 2_1:-38023973 Msa0207320:CDS
TATTCAACACAACAAGCTCA+GGG 0.630336 2_1:-38024240 Msa0207320:CDS
AACCCTACTTTACTGCAACA+AGG 0.643610 2_1:+38024922 None:intergenic
GGTGCAGCAGATGAGATCAA+AGG 0.650426 2_1:+38024036 None:intergenic
AGTAAAGTAGGGTTGAAGAG+AGG 0.673548 2_1:-38024913 Msa0207320:CDS
CTTCGCCCATCCGTCAAACG+CGG 0.674824 2_1:-38024754 Msa0207320:CDS
ACCTGTTGCCGAGAAGACGG+TGG 0.688134 2_1:+38024692 None:intergenic
TAGGGTTGAAGAGAGGACCA+TGG 0.693865 2_1:-38024906 Msa0207320:CDS
GTGCTTACCAACAACAACAG+AGG 0.695079 2_1:-38024171 Msa0207320:CDS
CGTGCTGGTCTTCTCCGTTG+CGG 0.716079 2_1:-38024808 Msa0207320:CDS
TTATGAGTAGACATGATGAG+CGG 0.724968 2_1:+38023994 None:intergenic
AGTAGTAATAACAATTACGG+CGG 0.747388 2_1:-38024135 Msa0207320:CDS
GCTTACCAACAACAACAGAG+GGG 0.820454 2_1:-38024169 Msa0207320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATTGATGAAAATAA+GGG + chr2_1:38024409-38024428 None:intergenic 10.0%
!! TAATTTAATTGATGAAAATA+AGG + chr2_1:38024410-38024429 None:intergenic 10.0%
!! ATAATGAGATAAAAAATTAT+TGG - chr2_1:38024544-38024563 Msa0207320:intron 10.0%
!! AATTTAATTGATGAAAATAA+GGG + chr2_1:38024409-38024428 None:intergenic 10.0%
!! TAATTTAATTGATGAAAATA+AGG + chr2_1:38024410-38024429 None:intergenic 10.0%
!! ATAATGAGATAAAAAATTAT+TGG - chr2_1:38024544-38024563 Msa0207320:intron 10.0%
!! TCAGAATATATTAAAAAAGA+AGG - chr2_1:38024143-38024162 Msa0207320:CDS 15.0%
!!! TTTCATTTTCATCAATATTT+AGG - chr2_1:38024367-38024386 Msa0207320:CDS 15.0%
!!! TTCATTTTCATCAATATTTA+GGG - chr2_1:38024368-38024387 Msa0207320:CDS 15.0%
!! AAAGAATTAATATATGATTC+AGG - chr2_1:38024484-38024503 Msa0207320:CDS 15.0%
!! ATAGTATAATTAGTAGTAAT+TGG + chr2_1:38024699-38024718 None:intergenic 15.0%
!! TCAGAATATATTAAAAAAGA+AGG - chr2_1:38024143-38024162 Msa0207320:CDS 15.0%
!!! TTTCATTTTCATCAATATTT+AGG - chr2_1:38024367-38024386 Msa0207320:CDS 15.0%
!!! TTCATTTTCATCAATATTTA+GGG - chr2_1:38024368-38024387 Msa0207320:CDS 15.0%
!! AAAGAATTAATATATGATTC+AGG - chr2_1:38024484-38024503 Msa0207320:CDS 15.0%
!! ATAGTATAATTAGTAGTAAT+TGG + chr2_1:38024699-38024718 None:intergenic 15.0%
!! TATATTAAAAAAGAAGGTGA+AGG - chr2_1:38024149-38024168 Msa0207320:CDS 20.0%
!! AAAATAAGGGTAACAAATTA+AGG + chr2_1:38024396-38024415 None:intergenic 20.0%
!! TAATGATTATTATGATGAGA+GGG + chr2_1:38024744-38024763 None:intergenic 20.0%
!! ATAATGATTATTATGATGAG+AGG + chr2_1:38024745-38024764 None:intergenic 20.0%
!! TATATTAAAAAAGAAGGTGA+AGG - chr2_1:38024149-38024168 Msa0207320:CDS 20.0%
!! AAAATAAGGGTAACAAATTA+AGG + chr2_1:38024396-38024415 None:intergenic 20.0%
!! TAATGATTATTATGATGAGA+GGG + chr2_1:38024744-38024763 None:intergenic 20.0%
!! ATAATGATTATTATGATGAG+AGG + chr2_1:38024745-38024764 None:intergenic 20.0%
!!! ATCTTCTTCTGTTTTTTGTT+TGG + chr2_1:38024017-38024036 None:intergenic 25.0%
! AAGAGGAATTGGTATATATA+CGG + chr2_1:38024339-38024358 None:intergenic 25.0%
! TATACCAATTCCTCTTATAT+AGG - chr2_1:38024343-38024362 Msa0207320:CDS 25.0%
! ATACCAATTCCTCTTATATA+GGG - chr2_1:38024344-38024363 Msa0207320:CDS 25.0%
! AAAATGAAACCCTATATAAG+AGG + chr2_1:38024356-38024375 None:intergenic 25.0%
! GAATTAATATATGATTCAGG+TGG - chr2_1:38024487-38024506 Msa0207320:CDS 25.0%
! GACAGTAGTAATAACAATTA+CGG - chr2_1:38024864-38024883 Msa0207320:CDS 25.0%
!!! ATCTTCTTCTGTTTTTTGTT+TGG + chr2_1:38024017-38024036 None:intergenic 25.0%
! AAGAGGAATTGGTATATATA+CGG + chr2_1:38024339-38024358 None:intergenic 25.0%
! TATACCAATTCCTCTTATAT+AGG - chr2_1:38024343-38024362 Msa0207320:CDS 25.0%
! ATACCAATTCCTCTTATATA+GGG - chr2_1:38024344-38024363 Msa0207320:CDS 25.0%
! AAAATGAAACCCTATATAAG+AGG + chr2_1:38024356-38024375 None:intergenic 25.0%
! GAATTAATATATGATTCAGG+TGG - chr2_1:38024487-38024506 Msa0207320:CDS 25.0%
! GACAGTAGTAATAACAATTA+CGG - chr2_1:38024864-38024883 Msa0207320:CDS 25.0%
AAACCCTATATAAGAGGAAT+TGG + chr2_1:38024350-38024369 None:intergenic 30.0%
AGCAAGAAACTTATTAACCA+AGG - chr2_1:38024579-38024598 Msa0207320:intron 30.0%
GCAAGAAACTTATTAACCAA+GGG - chr2_1:38024580-38024599 Msa0207320:intron 30.0%
! GGAGTATTAACACTATTAAG+AGG + chr2_1:38024627-38024646 None:intergenic 30.0%
! AGTTAATGATGTTTCTGCAA+TGG - chr2_1:38024797-38024816 Msa0207320:CDS 30.0%
AGTAGTAATAACAATTACGG+CGG - chr2_1:38024867-38024886 Msa0207320:CDS 30.0%
AAACCCTATATAAGAGGAAT+TGG + chr2_1:38024350-38024369 None:intergenic 30.0%
AGCAAGAAACTTATTAACCA+AGG - chr2_1:38024579-38024598 Msa0207320:intron 30.0%
GCAAGAAACTTATTAACCAA+GGG - chr2_1:38024580-38024599 Msa0207320:intron 30.0%
! GGAGTATTAACACTATTAAG+AGG + chr2_1:38024627-38024646 None:intergenic 30.0%
! AGTTAATGATGTTTCTGCAA+TGG - chr2_1:38024797-38024816 Msa0207320:CDS 30.0%
AGTAGTAATAACAATTACGG+CGG - chr2_1:38024867-38024886 Msa0207320:CDS 30.0%
TCTTGATCTGTTGAAGAAGA+AGG + chr2_1:38023969-38023988 None:intergenic 35.0%
ATCTCATTATCAGTTCTTCC+TGG + chr2_1:38024534-38024553 None:intergenic 35.0%
TTAAGAGGCTTATGAGTTCT+GGG + chr2_1:38024612-38024631 None:intergenic 35.0%
ATTAAGAGGCTTATGAGTTC+TGG + chr2_1:38024613-38024632 None:intergenic 35.0%
!! TGTTGATGATGATCAGAAAG+AGG + chr2_1:38024672-38024691 None:intergenic 35.0%
TTATTCAACACAACAAGCTC+AGG - chr2_1:38024761-38024780 Msa0207320:CDS 35.0%
TATTCAACACAACAAGCTCA+GGG - chr2_1:38024762-38024781 Msa0207320:CDS 35.0%
CGATGTGTTTACTTCATTTC+TGG - chr2_1:38024893-38024912 Msa0207320:CDS 35.0%
TTATGAGTAGACATGATGAG+CGG + chr2_1:38025011-38025030 None:intergenic 35.0%
AATTTCACCCAAAACCAAGA+CGG - chr2_1:38025029-38025048 Msa0207320:CDS 35.0%
TCTTGATCTGTTGAAGAAGA+AGG + chr2_1:38023969-38023988 None:intergenic 35.0%
ATCTCATTATCAGTTCTTCC+TGG + chr2_1:38024534-38024553 None:intergenic 35.0%
TTAAGAGGCTTATGAGTTCT+GGG + chr2_1:38024612-38024631 None:intergenic 35.0%
ATTAAGAGGCTTATGAGTTC+TGG + chr2_1:38024613-38024632 None:intergenic 35.0%
!! TGTTGATGATGATCAGAAAG+AGG + chr2_1:38024672-38024691 None:intergenic 35.0%
TTATTCAACACAACAAGCTC+AGG - chr2_1:38024761-38024780 Msa0207320:CDS 35.0%
TATTCAACACAACAAGCTCA+GGG - chr2_1:38024762-38024781 Msa0207320:CDS 35.0%
CGATGTGTTTACTTCATTTC+TGG - chr2_1:38024893-38024912 Msa0207320:CDS 35.0%
TTATGAGTAGACATGATGAG+CGG + chr2_1:38025011-38025030 None:intergenic 35.0%
AATTTCACCCAAAACCAAGA+CGG - chr2_1:38025029-38025048 Msa0207320:CDS 35.0%
ACACCTTGTTGCAGTAAAGT+AGG - chr2_1:38024077-38024096 Msa0207320:CDS 40.0%
CACCTTGTTGCAGTAAAGTA+GGG - chr2_1:38024078-38024097 Msa0207320:CDS 40.0%
AACCCTACTTTACTGCAACA+AGG + chr2_1:38024083-38024102 None:intergenic 40.0%
AGTAAAGTAGGGTTGAAGAG+AGG - chr2_1:38024089-38024108 Msa0207320:CDS 40.0%
AAAAAGAAGGTGAAGGTCGT+TGG - chr2_1:38024156-38024175 Msa0207320:CDS 40.0%
GGCGAAGATAATTCATCCAA+CGG + chr2_1:38024235-38024254 None:intergenic 40.0%
AGGATGAGATCTTCTTCATC+AGG + chr2_1:38024284-38024303 None:intergenic 40.0%
GCAGAAGATGATGCAAAGAA+AGG + chr2_1:38024648-38024667 None:intergenic 40.0%
TGCTTACCAACAACAACAGA+GGG - chr2_1:38024832-38024851 Msa0207320:CDS 40.0%
ATAATCCCCTCTGTTGTTGT+TGG + chr2_1:38024841-38024860 None:intergenic 40.0%
AACAACAACAGAGGGGATTA+TGG - chr2_1:38024840-38024859 Msa0207320:CDS 40.0%
ATTTCACCCAAAACCAAGAC+GGG - chr2_1:38025030-38025049 Msa0207320:CDS 40.0%
ACACCTTGTTGCAGTAAAGT+AGG - chr2_1:38024077-38024096 Msa0207320:CDS 40.0%
CACCTTGTTGCAGTAAAGTA+GGG - chr2_1:38024078-38024097 Msa0207320:CDS 40.0%
AACCCTACTTTACTGCAACA+AGG + chr2_1:38024083-38024102 None:intergenic 40.0%
AGTAAAGTAGGGTTGAAGAG+AGG - chr2_1:38024089-38024108 Msa0207320:CDS 40.0%
AAAAAGAAGGTGAAGGTCGT+TGG - chr2_1:38024156-38024175 Msa0207320:CDS 40.0%
GGCGAAGATAATTCATCCAA+CGG + chr2_1:38024235-38024254 None:intergenic 40.0%
AGGATGAGATCTTCTTCATC+AGG + chr2_1:38024284-38024303 None:intergenic 40.0%
GCAGAAGATGATGCAAAGAA+AGG + chr2_1:38024648-38024667 None:intergenic 40.0%
TGCTTACCAACAACAACAGA+GGG - chr2_1:38024832-38024851 Msa0207320:CDS 40.0%
ATAATCCCCTCTGTTGTTGT+TGG + chr2_1:38024841-38024860 None:intergenic 40.0%
AACAACAACAGAGGGGATTA+TGG - chr2_1:38024840-38024859 Msa0207320:CDS 40.0%
ATTTCACCCAAAACCAAGAC+GGG - chr2_1:38025030-38025049 Msa0207320:CDS 40.0%
TCATCTTCTTCTGCAGTCCA+TGG + chr2_1:38024116-38024135 None:intergenic 45.0%
TATACCTGTTGCCGAGAAGA+CGG + chr2_1:38024316-38024335 None:intergenic 45.0%
! TTCAGGTGGTCATTGATAGC+TGG - chr2_1:38024501-38024520 Msa0207320:intron 45.0%
! TCAGGTGGTCATTGATAGCT+GGG - chr2_1:38024502-38024521 Msa0207320:intron 45.0%
! TTGATAGCTGGGAGAATTCC+AGG - chr2_1:38024513-38024532 Msa0207320:intron 45.0%
GATGAGAGGGATCATCAGAT+TGG + chr2_1:38024731-38024750 None:intergenic 45.0%
GTGCTTACCAACAACAACAG+AGG - chr2_1:38024831-38024850 Msa0207320:CDS 45.0%
GCTTACCAACAACAACAGAG+GGG - chr2_1:38024833-38024852 Msa0207320:CDS 45.0%
!! AGCTTTCCCGTCTTGGTTTT+GGG + chr2_1:38025039-38025058 None:intergenic 45.0%
! AAGCTTTCCCGTCTTGGTTT+TGG + chr2_1:38025040-38025059 None:intergenic 45.0%
TCATCTTCTTCTGCAGTCCA+TGG + chr2_1:38024116-38024135 None:intergenic 45.0%
TATACCTGTTGCCGAGAAGA+CGG + chr2_1:38024316-38024335 None:intergenic 45.0%
! TTCAGGTGGTCATTGATAGC+TGG - chr2_1:38024501-38024520 Msa0207320:intron 45.0%
! TCAGGTGGTCATTGATAGCT+GGG - chr2_1:38024502-38024521 Msa0207320:intron 45.0%
! TTGATAGCTGGGAGAATTCC+AGG - chr2_1:38024513-38024532 Msa0207320:intron 45.0%
GATGAGAGGGATCATCAGAT+TGG + chr2_1:38024731-38024750 None:intergenic 45.0%
GTGCTTACCAACAACAACAG+AGG - chr2_1:38024831-38024850 Msa0207320:CDS 45.0%
GCTTACCAACAACAACAGAG+GGG - chr2_1:38024833-38024852 Msa0207320:CDS 45.0%
!! AGCTTTCCCGTCTTGGTTTT+GGG + chr2_1:38025039-38025058 None:intergenic 45.0%
! AAGCTTTCCCGTCTTGGTTT+TGG + chr2_1:38025040-38025059 None:intergenic 45.0%
TAGGGTTGAAGAGAGGACCA+TGG - chr2_1:38024096-38024115 Msa0207320:CDS 50.0%
AGAACTCTCCCAAAACGTGC+TGG - chr2_1:38024179-38024198 Msa0207320:CDS 50.0%
! GGAGAAGACCAGCACGTTTT+GGG + chr2_1:38024190-38024209 None:intergenic 50.0%
!! GAGTTCTGGGATCAATCCCT+TGG + chr2_1:38024599-38024618 None:intergenic 50.0%
GGTGCAGCAGATGAGATCAA+AGG + chr2_1:38024969-38024988 None:intergenic 50.0%
TAGGGTTGAAGAGAGGACCA+TGG - chr2_1:38024096-38024115 Msa0207320:CDS 50.0%
AGAACTCTCCCAAAACGTGC+TGG - chr2_1:38024179-38024198 Msa0207320:CDS 50.0%
! GGAGAAGACCAGCACGTTTT+GGG + chr2_1:38024190-38024209 None:intergenic 50.0%
!! GAGTTCTGGGATCAATCCCT+TGG + chr2_1:38024599-38024618 None:intergenic 50.0%
GGTGCAGCAGATGAGATCAA+AGG + chr2_1:38024969-38024988 None:intergenic 50.0%
! CGGAGAAGACCAGCACGTTT+TGG + chr2_1:38024191-38024210 None:intergenic 55.0%
! GACGACAGCTTTTGCCGCAA+CGG + chr2_1:38024211-38024230 None:intergenic 55.0%
GCAAAAGCTGTCGTCTCCGT+TGG - chr2_1:38024216-38024235 Msa0207320:CDS 55.0%
! TCTGACCGCGTTTGACGGAT+GGG + chr2_1:38024256-38024275 None:intergenic 55.0%
ATCTGACCGCGTTTGACGGA+TGG + chr2_1:38024257-38024276 None:intergenic 55.0%
AGCGATCTGACCGCGTTTGA+CGG + chr2_1:38024261-38024280 None:intergenic 55.0%
! TGCTGCACCACCAGCTTTGT+GGG - chr2_1:38024980-38024999 Msa0207320:CDS 55.0%
! CGGAGAAGACCAGCACGTTT+TGG + chr2_1:38024191-38024210 None:intergenic 55.0%
! GACGACAGCTTTTGCCGCAA+CGG + chr2_1:38024211-38024230 None:intergenic 55.0%
GCAAAAGCTGTCGTCTCCGT+TGG - chr2_1:38024216-38024235 Msa0207320:CDS 55.0%
! TCTGACCGCGTTTGACGGAT+GGG + chr2_1:38024256-38024275 None:intergenic 55.0%
ATCTGACCGCGTTTGACGGA+TGG + chr2_1:38024257-38024276 None:intergenic 55.0%
AGCGATCTGACCGCGTTTGA+CGG + chr2_1:38024261-38024280 None:intergenic 55.0%
! TGCTGCACCACCAGCTTTGT+GGG - chr2_1:38024980-38024999 Msa0207320:CDS 55.0%
!! CGTGCTGGTCTTCTCCGTTG+CGG - chr2_1:38024194-38024213 Msa0207320:CDS 60.0%
CTTCGCCCATCCGTCAAACG+CGG - chr2_1:38024248-38024267 Msa0207320:CDS 60.0%
TGTTGCCGAGAAGACGGTGG+AGG + chr2_1:38024310-38024329 None:intergenic 60.0%
TCCACCGTCTTCTCGGCAAC+AGG - chr2_1:38024309-38024328 Msa0207320:CDS 60.0%
ACCTGTTGCCGAGAAGACGG+TGG + chr2_1:38024313-38024332 None:intergenic 60.0%
CTGCTGCACCACCAGCTTTG+TGG - chr2_1:38024979-38024998 Msa0207320:CDS 60.0%
GGCGATTCCCACAAAGCTGG+TGG + chr2_1:38024990-38025009 None:intergenic 60.0%
AGCGGCGATTCCCACAAAGC+TGG + chr2_1:38024993-38025012 None:intergenic 60.0%
!! CGTGCTGGTCTTCTCCGTTG+CGG - chr2_1:38024194-38024213 Msa0207320:CDS 60.0%
CTTCGCCCATCCGTCAAACG+CGG - chr2_1:38024248-38024267 Msa0207320:CDS 60.0%
TGTTGCCGAGAAGACGGTGG+AGG + chr2_1:38024310-38024329 None:intergenic 60.0%
TCCACCGTCTTCTCGGCAAC+AGG - chr2_1:38024309-38024328 Msa0207320:CDS 60.0%
ACCTGTTGCCGAGAAGACGG+TGG + chr2_1:38024313-38024332 None:intergenic 60.0%
CTGCTGCACCACCAGCTTTG+TGG - chr2_1:38024979-38024998 Msa0207320:CDS 60.0%
GGCGATTCCCACAAAGCTGG+TGG + chr2_1:38024990-38025009 None:intergenic 60.0%
AGCGGCGATTCCCACAAAGC+TGG + chr2_1:38024993-38025012 None:intergenic 60.0%
CTCCGCCTCCACCGTCTTCT+CGG - chr2_1:38024302-38024321 Msa0207320:CDS 65.0%
TGCCGAGAAGACGGTGGAGG+CGG + chr2_1:38024307-38024326 None:intergenic 65.0%
CTCCGCCTCCACCGTCTTCT+CGG - chr2_1:38024302-38024321 Msa0207320:CDS 65.0%
TGCCGAGAAGACGGTGGAGG+CGG + chr2_1:38024307-38024326 None:intergenic 65.0%
CGAGAAGACGGTGGAGGCGG+AGG + chr2_1:38024304-38024323 None:intergenic 70.0%
CGAGAAGACGGTGGAGGCGG+AGG + chr2_1:38024304-38024323 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 38023960 38025064 38023960 ID=Msa0207320;Name=Msa0207320
chr2_1 mRNA 38023960 38025064 38023960 ID=Msa0207320-mRNA-1;Parent=Msa0207320;Name=Msa0207320-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|309
chr2_1 exon 38024694 38025064 38024694 ID=Msa0207320-mRNA-1:exon:12232;Parent=Msa0207320-mRNA-1
chr2_1 exon 38023960 38024518 38023960 ID=Msa0207320-mRNA-1:exon:12231;Parent=Msa0207320-mRNA-1
chr2_1 CDS 38024694 38025064 38024694 ID=Msa0207320-mRNA-1:cds;Parent=Msa0207320-mRNA-1
chr2_1 CDS 38023960 38024518 38023960 ID=Msa0207320-mRNA-1:cds;Parent=Msa0207320-mRNA-1
Gene Sequence

>Msa0207320

ATGAATCCTTCTTCTTCAACAGATCAAGACAAATCAGAAACAACAAATTCAACTCCAAACAAAAAACAGAAGAAGATCAGTAACAGTACAACAACAACAACAACAACAACAACAACTACACCTTGTTGCAGTAAAGTAGGGTTGAAGAGAGGACCATGGACTGCAGAAGAAGATGAAGTTTTATCAGAATATATTAAAAAAGAAGGTGAAGGTCGTTGGAGAACTCTCCCAAAACGTGCTGGTCTTCTCCGTTGCGGCAAAAGCTGTCGTCTCCGTTGGATGAATTATCTTCGCCCATCCGTCAAACGCGGTCAGATCGCTCCTGATGAAGAAGATCTCATCCTCCGCCTCCACCGTCTTCTCGGCAACAGGTGGTCATTGATAGCTGGGAGAATTCCAGGAAGAACTGATAATGAGATAAAAAATTATTGGAACACACATCTCAGCAAGAAACTTATTAACCAAGGGATTGATCCCAGAACTCATAAGCCTCTTAATAGTGTTAATACTCCTTTCTTTGCATCATCTTCTGCTCCTCTTTCTGATCATCATCAACATCATCCAATTACTACTAATTATACTATCACTAACAACCAATCTGATGATCCCTCTCATCATAATAATCATTATTCAACACAACAAGCTCAGGGTTGTGATAACTTAGTTAATGATGTTTCTGCAATGGATAATCATCATGTGCTTACCAACAACAACAGAGGGGATTATGGTGACAGTAGTAATAACAATTACGGCGGTGACGATGTGTTTACTTCATTTCTGGATTCATTGATCAACGACGATGCATTTGCTGCACACAGATCAGAGAATGATCCTTTGATCTCATCTGCTGCACCACCAGCTTTGTGGGAATCGCCGCTCATCATGTCTACTCATAATTTCACCCAAAACCAAGACGGGAAAGCTTCATGA
Protein sequence

>Msa0207320

MNPSSSTDQDKSETTNSTPNKKQKKISNSTTTTTTTTTTTPCCSKVGLKRGPWTAEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTHKPLNSVNTPFFASSSAPLSDHHQHHPITTNYTITNNQSDDPSHHNNHYSTQQAQGCDNLVNDVSAMDNHHVLTNNNRGDYGDSSNNNYGGDDVFTSFLDSLINDDAFAAHRSENDPLISSAAPPALWESPLIMSTHNFTQNQDGKAS*