Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208420 | QKE45416.1 | 83.529 | 85 | 14 | 0 | 63 | 147 | 631 | 715 | 2.03e-39 | 151 |
| Msa0208420 | QKE45416.1 | 84.906 | 53 | 7 | 1 | 11 | 62 | 332 | 384 | 4.79e-19 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208420 | A0A7D3QB06 | 83.529 | 85 | 14 | 0 | 63 | 147 | 631 | 715 | 9.71e-40 | 151 |
| Msa0208420 | A0A7D3QB06 | 84.906 | 53 | 7 | 1 | 11 | 62 | 332 | 384 | 2.29e-19 | 94.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0208420 | Msa0209200 | 0.820529 | 6.536683e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0208420 | MtrunA17_Chr2g0307191 | 81.176 | 85 | 16 | 0 | 63 | 147 | 608 | 692 | 3.84e-41 | 145 |
| Msa0208420 | MtrunA17_Chr2g0307191 | 84.906 | 53 | 7 | 1 | 11 | 62 | 309 | 361 | 4.87e-23 | 94.0 |
| Msa0208420 | MtrunA17_Chr2g0298581 | 75.294 | 85 | 21 | 0 | 63 | 147 | 608 | 692 | 3.86e-40 | 142 |
| Msa0208420 | MtrunA17_Chr2g0298581 | 75.472 | 53 | 12 | 1 | 11 | 62 | 309 | 361 | 5.38e-21 | 88.2 |
| Msa0208420 | MtrunA17_Chr3g0095791 | 74.118 | 85 | 22 | 0 | 63 | 147 | 607 | 691 | 2.89e-39 | 140 |
| Msa0208420 | MtrunA17_Chr3g0095791 | 77.358 | 53 | 11 | 1 | 11 | 62 | 308 | 360 | 1.62e-20 | 86.7 |
| Msa0208420 | MtrunA17_Chr3g0077511 | 61.111 | 90 | 33 | 1 | 60 | 147 | 605 | 694 | 1.11e-33 | 124 |
| Msa0208420 | MtrunA17_Chr3g0077511 | 74.074 | 54 | 13 | 1 | 11 | 63 | 309 | 362 | 8.64e-21 | 87.4 |
| Msa0208420 | MtrunA17_Chr2g0307231 | 88.679 | 53 | 5 | 1 | 11 | 62 | 2 | 54 | 5.40e-27 | 97.1 |
| Msa0208420 | MtrunA17_Chr1g0186381 | 34.524 | 84 | 55 | 0 | 63 | 146 | 629 | 712 | 3.27e-15 | 71.6 |
| Msa0208420 | MtrunA17_Chr4g0046401 | 34.524 | 84 | 55 | 0 | 63 | 146 | 630 | 713 | 4.22e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 36 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAATATTGTTTGCTTCTT+TGG | 0.107692 | 2_1:-43521994 | Msa0208420:CDS |
| TTTGCTTCTTTGGTGGTTTA+TGG | 0.147499 | 2_1:-43521984 | Msa0208420:CDS |
| GGCTCTAAGTTATCCAATTC+TGG | 0.260282 | 2_1:-43521896 | Msa0208420:CDS |
| TTTCCTCATTAGCTATATAT+TGG | 0.271119 | 2_1:-43521917 | Msa0208420:CDS |
| GTTATATACCCTTCCAGAAT+TGG | 0.305407 | 2_1:+43521883 | None:intergenic |
| CAGGGTAAGTTTAATTTAGA+TGG | 0.311448 | 2_1:-43522057 | Msa0208420:CDS |
| AGTAGAAGTGCATTACTCTT+TGG | 0.329145 | 2_1:-43525902 | Msa0208420:CDS |
| TTTGGAAGTCCAAATCAAAA+AGG | 0.372372 | 2_1:-43525884 | Msa0208420:intron |
| CTAAGGTTGTGAAACATTTG+AGG | 0.415344 | 2_1:+43526264 | None:intergenic |
| ATTGTGATTAACACAGTCAA+TGG | 0.419239 | 2_1:+43522015 | None:intergenic |
| ATCATATGTCTTTCTTGCTA+AGG | 0.433387 | 2_1:+43526247 | None:intergenic |
| AATATTGTTTGCTTCTTTGG+TGG | 0.435397 | 2_1:-43521991 | Msa0208420:CDS |
| TAAGCTAAAGAAATATGAGC+AGG | 0.493122 | 2_1:-43522076 | Msa0208420:CDS |
| GAGCCAATATATAGCTAATG+AGG | 0.503805 | 2_1:+43521914 | None:intergenic |
| TAAGGTTGTGAAACATTTGA+GGG | 0.508349 | 2_1:+43526265 | None:intergenic |
| TTAAGAGGTCCAGGTCTTAG+TGG | 0.512478 | 2_1:-43525941 | Msa0208420:CDS |
| ATGGATGGATTAAGAGGTCC+AGG | 0.518984 | 2_1:-43525950 | Msa0208420:CDS |
| GGTCCAGGTCTTAGTGGCAG+TGG | 0.529165 | 2_1:-43525935 | Msa0208420:CDS |
| AAGGGTATATAACTACGAAA+AGG | 0.543180 | 2_1:-43521873 | Msa0208420:CDS |
| GCTTCTTTGGTGGTTTATGG+AGG | 0.543342 | 2_1:-43521981 | Msa0208420:CDS |
| TTAGACAATGTGGAAAGGAA+TGG | 0.546732 | 2_1:-43525969 | Msa0208420:intron |
| AGATGGTGCAGCAGTGCTCA+TGG | 0.553822 | 2_1:-43522040 | Msa0208420:CDS |
| CTAAGTTATCCAATTCTGGA+AGG | 0.554967 | 2_1:-43521892 | Msa0208420:CDS |
| TTTCCACTGCCACTAAGACC+TGG | 0.556095 | 2_1:+43525932 | None:intergenic |
| TAACTACGAAAAGGAAGGGT+GGG | 0.559047 | 2_1:-43521864 | Msa0208420:CDS |
| ACAATGTGGAAAGGAATGGA+TGG | 0.563719 | 2_1:-43525965 | Msa0208420:CDS |
| TTAACTTCTATTAGACAATG+TGG | 0.570854 | 2_1:-43525979 | Msa0208420:intron |
| GTATATAACTACGAAAAGGA+AGG | 0.575344 | 2_1:-43521869 | Msa0208420:CDS |
| TATGGAGGTTACTTAATGTG+AGG | 0.591047 | 2_1:-43521966 | Msa0208420:CDS |
| TTCTATTAGACAATGTGGAA+AGG | 0.606727 | 2_1:-43525974 | Msa0208420:intron |
| AAAGGAATGGATGGATTAAG+AGG | 0.618466 | 2_1:-43525956 | Msa0208420:CDS |
| TAAGTTATCCAATTCTGGAA+GGG | 0.623886 | 2_1:-43521891 | Msa0208420:CDS |
| TATATAACTACGAAAAGGAA+GGG | 0.628367 | 2_1:-43521868 | Msa0208420:CDS |
| AAGCTAAAGAAATATGAGCA+GGG | 0.640748 | 2_1:-43522075 | Msa0208420:CDS |
| ATAACTACGAAAAGGAAGGG+TGG | 0.654019 | 2_1:-43521865 | Msa0208420:CDS |
| AGACATATGATAGTCAGACT+AGG | 0.659222 | 2_1:-43526235 | Msa0208420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTTATTTTTATTAA+AGG | - | chr2_1:43522461-43522480 | Msa0208420:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr2_1:43522629-43522648 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr2_1:43522630-43522649 | None:intergenic | 0.0% |
| !!! | AAAAAAAAAGCTTAAAATTT+TGG | + | chr2_1:43521956-43521975 | None:intergenic | 10.0% |
| !! | ATTTAATATATTAAACATAG+GGG | + | chr2_1:43522592-43522611 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAATGTTTCTAT+AGG | + | chr2_1:43523021-43523040 | None:intergenic | 10.0% |
| !! | AAAGAAATTATTATCATAAA+AGG | + | chr2_1:43523658-43523677 | None:intergenic | 10.0% |
| !!! | TTTTTCCATAATTATATAAT+GGG | + | chr2_1:43523725-43523744 | None:intergenic | 10.0% |
| !! | TTATAAAAACTTAGTATTAA+AGG | - | chr2_1:43523782-43523801 | Msa0208420:intron | 10.0% |
| !! | TAAAAAACCAAAAAAAAAAT+GGG | - | chr2_1:43524188-43524207 | Msa0208420:intron | 10.0% |
| !! | TTTACAATAAAAAATATAAG+AGG | + | chr2_1:43524710-43524729 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTTGTTTTGTTT+TGG | + | chr2_1:43525112-43525131 | None:intergenic | 10.0% |
| !! | ACAAAAATAAAAATATTACA+AGG | - | chr2_1:43525119-43525138 | Msa0208420:intron | 10.0% |
| !! | TAACCTTCTTAATTAATATT+AGG | - | chr2_1:43522401-43522420 | Msa0208420:intron | 15.0% |
| !! | TATGATGAAATAAATTATAG+AGG | - | chr2_1:43522703-43522722 | Msa0208420:intron | 15.0% |
| !!! | ATTTTGTTTGGAATTTATAA+TGG | - | chr2_1:43522798-43522817 | Msa0208420:intron | 15.0% |
| !!! | GTTTTATCATATATTTTTGT+AGG | + | chr2_1:43523128-43523147 | None:intergenic | 15.0% |
| !! | AGTCTAAATGAAATTATATA+AGG | - | chr2_1:43523519-43523538 | Msa0208420:intron | 15.0% |
| !! | GTCTAAATGAAATTATATAA+GGG | - | chr2_1:43523520-43523539 | Msa0208420:intron | 15.0% |
| !!! | GTTTTTCCATAATTATATAA+TGG | + | chr2_1:43523726-43523745 | None:intergenic | 15.0% |
| !! | ATATCAGTCAAATTAATAAT+GGG | + | chr2_1:43523875-43523894 | None:intergenic | 15.0% |
| !! | TATATCAGTCAAATTAATAA+TGG | + | chr2_1:43523876-43523895 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTTTGGTTTTTT+AGG | + | chr2_1:43524189-43524208 | None:intergenic | 15.0% |
| !! | CTAAAAAACCAAAAAAAAAA+TGG | - | chr2_1:43524187-43524206 | Msa0208420:intron | 15.0% |
| !!! | AAAGAAAGTATATATTACTA+AGG | - | chr2_1:43524828-43524847 | Msa0208420:intron | 15.0% |
| !!! | ACTGAAATTTTATAAATTAC+AGG | - | chr2_1:43525064-43525083 | Msa0208420:intron | 15.0% |
| !!! | TCAAGATTATTATTTTTACT+TGG | + | chr2_1:43525236-43525255 | None:intergenic | 15.0% |
| !!! | TATTCACTATCATTTTTTTT+TGG | - | chr2_1:43525494-43525513 | Msa0208420:intron | 15.0% |
| !! | AATTAATAGAAGTAACATAT+TGG | + | chr2_1:43525527-43525546 | None:intergenic | 15.0% |
| !! | AAACAACAAAAAAAAAAGTT+TGG | - | chr2_1:43525998-43526017 | Msa0208420:intron | 15.0% |
| !! | AACAACAAAAAAAAAAGTTT+GGG | - | chr2_1:43525999-43526018 | Msa0208420:intron | 15.0% |
| !! | TTTATCTTTGAATCTTTCAT+CGG | - | chr2_1:43521988-43522007 | Msa0208420:CDS | 20.0% |
| !!! | ACAAAAATTAATGGATGAAA+GGG | + | chr2_1:43522111-43522130 | None:intergenic | 20.0% |
| !! | AACAAAGACACAAAAATTAA+TGG | + | chr2_1:43522120-43522139 | None:intergenic | 20.0% |
| !!! | TTATTTGTACCTTTTTGATT+TGG | + | chr2_1:43522273-43522292 | None:intergenic | 20.0% |
| !!! | TGTCTTTGTTTAAAGTTTTA+AGG | - | chr2_1:43522326-43522345 | Msa0208420:intron | 20.0% |
| !!! | GTCTTTGTTTAAAGTTTTAA+GGG | - | chr2_1:43522327-43522346 | Msa0208420:intron | 20.0% |
| !! | TGTCCTAATATTAATTAAGA+AGG | + | chr2_1:43522407-43522426 | None:intergenic | 20.0% |
| !!! | CTAATACTTATTTCTTTGTT+CGG | - | chr2_1:43522509-43522528 | Msa0208420:intron | 20.0% |
| !!! | TAATACTTATTTCTTTGTTC+GGG | - | chr2_1:43522510-43522529 | Msa0208420:intron | 20.0% |
| !! | ACAAAAATCTTTAGTCATAT+TGG | - | chr2_1:43522753-43522772 | Msa0208420:intron | 20.0% |
| !!! | CAATGTATTTTCATTTTGTT+TGG | - | chr2_1:43522786-43522805 | Msa0208420:intron | 20.0% |
| !! | TATGATAAAACTTAATTGAC+CGG | - | chr2_1:43523137-43523156 | Msa0208420:intron | 20.0% |
| !! | AATTCAATATGCAATAAGTA+TGG | + | chr2_1:43523493-43523512 | None:intergenic | 20.0% |
| !! | CTGTGTAATTAATACTAAAA+AGG | - | chr2_1:43523620-43523639 | Msa0208420:intron | 20.0% |
| !!! | TTTCTTCTTTTTTTTTCTCA+TGG | + | chr2_1:43524275-43524294 | None:intergenic | 20.0% |
| !!! | ATTTTATTGCTCCTTTAAAA+GGG | + | chr2_1:43524379-43524398 | None:intergenic | 20.0% |
| !! | ACTCACTTTCATTAATTATA+TGG | + | chr2_1:43524772-43524791 | None:intergenic | 20.0% |
| !!! | GGAAATAATTGTTTTTTACA+AGG | + | chr2_1:43524928-43524947 | None:intergenic | 20.0% |
| !!! | CAAAATTTTCTCAAATTACA+GGG | - | chr2_1:43525037-43525056 | Msa0208420:intron | 20.0% |
| !!! | AAAATTTTCTCAAATTACAG+GGG | - | chr2_1:43525038-43525057 | Msa0208420:intron | 20.0% |
| !!! | TGTTTTTTCTCTTGTAAAAT+AGG | + | chr2_1:43525191-43525210 | None:intergenic | 20.0% |
| !!! | TTACTTGGTAATTAGTAATA+GGG | + | chr2_1:43525221-43525240 | None:intergenic | 20.0% |
| !!! | TTTACTTGGTAATTAGTAAT+AGG | + | chr2_1:43525222-43525241 | None:intergenic | 20.0% |
| !! | ATATTGCATGTATAAATTCA+AGG | - | chr2_1:43525592-43525611 | Msa0208420:intron | 20.0% |
| !!! | ATAGATCCTTTAAGTTTTTT+AGG | - | chr2_1:43525658-43525677 | Msa0208420:intron | 20.0% |
| !! | GAAACAAACTCAAAATTTAA+AGG | + | chr2_1:43525725-43525744 | None:intergenic | 20.0% |
| !! | GTTACAAAAATGAAACTTAA+AGG | - | chr2_1:43525842-43525861 | Msa0208420:intron | 20.0% |
| !! | TCAACAAAATGTTGAAATTT+AGG | + | chr2_1:43525886-43525905 | None:intergenic | 20.0% |
| !!! | TAAATTTCAACATTTTGTTG+AGG | - | chr2_1:43525885-43525904 | Msa0208420:CDS | 20.0% |
| !! | ATAAATATTGTTTGCTTCTT+TGG | - | chr2_1:43526151-43526170 | Msa0208420:intron | 20.0% |
| !!! | AGGAATTTTAATGAAATGTT+TGG | - | chr2_1:43526199-43526218 | Msa0208420:intron | 20.0% |
| ! | TTATCTTTGAATCTTTCATC+GGG | - | chr2_1:43521989-43522008 | Msa0208420:CDS | 25.0% |
| ! | TCTACATTTGACCAAATTTA+CGG | - | chr2_1:43522021-43522040 | Msa0208420:CDS | 25.0% |
| ! | ATCTCTTCAAATAGAAGAAA+TGG | - | chr2_1:43522055-43522074 | Msa0208420:CDS | 25.0% |
| !! | CACAAAAATTAATGGATGAA+AGG | + | chr2_1:43522112-43522131 | None:intergenic | 25.0% |
| ! | TTAACTTCTATTAGACAATG+TGG | - | chr2_1:43522166-43522185 | Msa0208420:intron | 25.0% |
| ! | CATTCATTAACAATGATCTT+AGG | - | chr2_1:43522425-43522444 | Msa0208420:intron | 25.0% |
| ! | ACTAAGAGTTAATTAGTTAG+AGG | + | chr2_1:43522548-43522567 | None:intergenic | 25.0% |
| ! | ATAGGGGTAAGTATATTAAT+TGG | + | chr2_1:43522576-43522595 | None:intergenic | 25.0% |
| !!! | TGACTAAAGATTTTTGTTTG+AGG | + | chr2_1:43522750-43522769 | None:intergenic | 25.0% |
| ! | ATCCAAGTTAATAGCATAAA+AGG | - | chr2_1:43523095-43523114 | Msa0208420:intron | 25.0% |
| ! | TTATATAAGGGAAATGCTAA+CGG | - | chr2_1:43523532-43523551 | Msa0208420:intron | 25.0% |
| ! | TTGGTTAATGATGTTAGAAA+AGG | - | chr2_1:43523568-43523587 | Msa0208420:intron | 25.0% |
| ! | CATGACCCATTATATAATTA+TGG | - | chr2_1:43523717-43523736 | Msa0208420:intron | 25.0% |
| !! | TTAATTTGACTGATATACAC+AGG | - | chr2_1:43523879-43523898 | Msa0208420:intron | 25.0% |
| !! | TTTTGCCAATTTAACGAATT+CGG | - | chr2_1:43524089-43524108 | Msa0208420:intron | 25.0% |
| !!! | TTTTTGGTTTTTTAGGTCAA+GGG | + | chr2_1:43524182-43524201 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTTTTTTAGGTCA+AGG | + | chr2_1:43524183-43524202 | None:intergenic | 25.0% |
| !!! | TCAAAGACCCATTTTTTTTT+TGG | + | chr2_1:43524198-43524217 | None:intergenic | 25.0% |
| !! | GATTTTATTGCTCCTTTAAA+AGG | + | chr2_1:43524380-43524399 | None:intergenic | 25.0% |
| !! | GGAAATTACATATTTTACAG+GGG | + | chr2_1:43524869-43524888 | None:intergenic | 25.0% |
| !! | CGGAAATTACATATTTTACA+GGG | + | chr2_1:43524870-43524889 | None:intergenic | 25.0% |
| ! | CCTGTAAAATATGTAATTTC+CGG | - | chr2_1:43524868-43524887 | Msa0208420:intron | 25.0% |
| ! | CAGATAATTTGAGCAAATTT+CGG | + | chr2_1:43525009-43525028 | None:intergenic | 25.0% |
| !! | GAAATTTGCTCAAATTATCT+GGG | - | chr2_1:43525008-43525027 | Msa0208420:intron | 25.0% |
| !! | AAATTTGCTCAAATTATCTG+GGG | - | chr2_1:43525009-43525028 | Msa0208420:intron | 25.0% |
| !! | CCTGTAATTTGAGAAAATTT+TGG | + | chr2_1:43525039-43525058 | None:intergenic | 25.0% |
| !! | CCAAAATTTTCTCAAATTAC+AGG | - | chr2_1:43525036-43525055 | Msa0208420:intron | 25.0% |
| !!! | TTCCAAACCGAAATTTTTTT+AGG | - | chr2_1:43525147-43525166 | Msa0208420:intron | 25.0% |
| !!! | TCCAAACCGAAATTTTTTTA+GGG | - | chr2_1:43525148-43525167 | Msa0208420:intron | 25.0% |
| ! | TTACACCCCTAAAAAAATTT+CGG | + | chr2_1:43525157-43525176 | None:intergenic | 25.0% |
| ! | TCATTTAAGTGAATTAGAAC+AGG | - | chr2_1:43525462-43525481 | Msa0208420:intron | 25.0% |
| ! | ATTGTAAACACTATAAACCA+AGG | + | chr2_1:43525574-43525593 | None:intergenic | 25.0% |
| ! | CTGTTACCTAAAAAACTTAA+AGG | + | chr2_1:43525811-43525830 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTAGGTAACAGAT+AGG | - | chr2_1:43525669-43525688 | Msa0208420:intron | 25.0% |
| !!! | ATTTTGAGTTTGTTTCAGAT+AGG | - | chr2_1:43525729-43525748 | Msa0208420:intron | 25.0% |
| !!! | AAGTTTCTAAAGTTTCAGAT+AGG | + | chr2_1:43525780-43525799 | None:intergenic | 25.0% |
| !! | CTGAAACTTTAGAAACTTAA+AGG | - | chr2_1:43525782-43525801 | Msa0208420:intron | 25.0% |
| !!! | AAGTTTTTTAGGTAACAGAT+AGG | + | chr2_1:43525669-43525688 | None:intergenic | 25.0% |
| ! | CTGTTACCTAAAAAACTTAA+AGG | - | chr2_1:43525811-43525830 | Msa0208420:intron | 25.0% |
| !!! | ATAGGTCCTTTAAGTTTTTT+AGG | + | chr2_1:43525820-43525839 | None:intergenic | 25.0% |
| !!! | GTTTCATTTTTGTAACAGAT+AGG | + | chr2_1:43525838-43525857 | None:intergenic | 25.0% |
| ! | TTTCCTCATTAGCTATATAT+TGG | - | chr2_1:43526228-43526247 | Msa0208420:CDS | 25.0% |
| ! | TATATAACTACGAAAAGGAA+GGG | - | chr2_1:43526277-43526296 | Msa0208420:CDS | 25.0% |
| TAAGGTTGTGAAACATTTGA+GGG | + | chr2_1:43521883-43521902 | None:intergenic | 30.0% | |
| ATCATATGTCTTTCTTGCTA+AGG | + | chr2_1:43521901-43521920 | None:intergenic | 30.0% | |
| GTAAATTTGGTCAAATGTAG+AGG | + | chr2_1:43522022-43522041 | None:intergenic | 30.0% | |
| AAAGACACATACCGTAAATT+TGG | + | chr2_1:43522035-43522054 | None:intergenic | 30.0% | |
| TTCTATTAGACAATGTGGAA+AGG | - | chr2_1:43522171-43522190 | Msa0208420:intron | 30.0% | |
| TTTGGAAGTCCAAATCAAAA+AGG | - | chr2_1:43522261-43522280 | Msa0208420:intron | 30.0% | |
| TTCATCATATACATTGCTGA+AGG | + | chr2_1:43522692-43522711 | None:intergenic | 30.0% | |
| ! | TGTTTGGAATTTATAATGGC+AGG | - | chr2_1:43522802-43522821 | Msa0208420:intron | 30.0% |
| ! | GTTTGGAATTTATAATGGCA+GGG | - | chr2_1:43522803-43522822 | Msa0208420:intron | 30.0% |
| ! | TTTGGAATTTATAATGGCAG+GGG | - | chr2_1:43522804-43522823 | Msa0208420:intron | 30.0% |
| ! | TTTACAAGAAGCATATGAAG+TGG | - | chr2_1:43522939-43522958 | Msa0208420:intron | 30.0% |
| CTATGAGAGAAACACAAATT+GGG | - | chr2_1:43522972-43522991 | Msa0208420:intron | 30.0% | |
| TATGAGAGAAACACAAATTG+GGG | - | chr2_1:43522973-43522992 | Msa0208420:intron | 30.0% | |
| ! | TGCCTTTTATGCTATTAACT+TGG | + | chr2_1:43523100-43523119 | None:intergenic | 30.0% |
| CGGTATTCAATCAAAGATTT+GGG | + | chr2_1:43523197-43523216 | None:intergenic | 30.0% | |
| ATTTCATCATCTAAATGTGG+TGG | + | chr2_1:43523269-43523288 | None:intergenic | 30.0% | |
| GTGATTTCATCATCTAAATG+TGG | + | chr2_1:43523272-43523291 | None:intergenic | 30.0% | |
| AAAGAGAGAAAAAGATGAAG+AGG | - | chr2_1:43523330-43523349 | Msa0208420:intron | 30.0% | |
| AAGAGAGAAAAAGATGAAGA+GGG | - | chr2_1:43523331-43523350 | Msa0208420:intron | 30.0% | |
| AACCTATAGAGAGAAAACTA+TGG | - | chr2_1:43523412-43523431 | Msa0208420:intron | 30.0% | |
| ! | ATGGTGTTAAGTGTTTCTAT+AGG | + | chr2_1:43523474-43523493 | None:intergenic | 30.0% |
| TATATAAGGGAAATGCTAAC+GGG | - | chr2_1:43523533-43523552 | Msa0208420:intron | 30.0% | |
| TAACATCATTAACCAATACC+CGG | + | chr2_1:43523564-43523583 | None:intergenic | 30.0% | |
| AATGTCAACATCATGCTTTA+AGG | + | chr2_1:43523809-43523828 | None:intergenic | 30.0% | |
| AGTATGGAATTGAAATTCAG+TGG | + | chr2_1:43523987-43524006 | None:intergenic | 30.0% | |
| TTCCATACTAAGAAGCAATT+TGG | - | chr2_1:43523998-43524017 | Msa0208420:intron | 30.0% | |
| TCCATACTAAGAAGCAATTT+GGG | - | chr2_1:43523999-43524018 | Msa0208420:intron | 30.0% | |
| AATTTGGGTAATGCAAAATC+TGG | - | chr2_1:43524014-43524033 | Msa0208420:intron | 30.0% | |
| ATATTCATTGCTTCTCAGTA+TGG | + | chr2_1:43524050-43524069 | None:intergenic | 30.0% | |
| !!! | ATGGTTTTAATTTCACCAGT+TGG | + | chr2_1:43524256-43524275 | None:intergenic | 30.0% |
| AACCGTTTATTTCAATCCAA+TGG | - | chr2_1:43524402-43524421 | Msa0208420:intron | 30.0% | |
| GACCATTGGATTGAAATAAA+CGG | + | chr2_1:43524407-43524426 | None:intergenic | 30.0% | |
| ATTTCAATCCAATGGTCAAT+AGG | - | chr2_1:43524410-43524429 | Msa0208420:intron | 30.0% | |
| ! | CCGGAAATTACATATTTTAC+AGG | + | chr2_1:43524871-43524890 | None:intergenic | 30.0% |
| AAATTTCTTAGAGGGTAAAC+CGG | + | chr2_1:43524890-43524909 | None:intergenic | 30.0% | |
| CCAAACAGAAATTTCTTAGA+GGG | + | chr2_1:43524898-43524917 | None:intergenic | 30.0% | |
| TCCAAACAGAAATTTCTTAG+AGG | + | chr2_1:43524899-43524918 | None:intergenic | 30.0% | |
| ACTTTACAAATTCGATGATC+TGG | - | chr2_1:43524971-43524990 | Msa0208420:intron | 30.0% | |
| ! | CGAAATTTGCTCAAATTATC+TGG | - | chr2_1:43525007-43525026 | Msa0208420:intron | 30.0% |
| !!! | CCAAACCGAAATTTTTTTAG+GGG | - | chr2_1:43525149-43525168 | Msa0208420:intron | 30.0% |
| !!! | ATTTTTTTAGGGGTGTAAAC+CGG | - | chr2_1:43525159-43525178 | Msa0208420:intron | 30.0% |
| CTTGTAAAATAGGTCATTTC+CGG | + | chr2_1:43525181-43525200 | None:intergenic | 30.0% | |
| !! | TCCAGGGTACAATATTTTTA+GGG | + | chr2_1:43525262-43525281 | None:intergenic | 30.0% |
| TAAAAATATTGTACCCTGGA+CGG | - | chr2_1:43525262-43525281 | Msa0208420:intron | 30.0% | |
| CAAGTCTGTTTATAAGTTAG+AGG | + | chr2_1:43525318-43525337 | None:intergenic | 30.0% | |
| CTCTAACTTATAAACAGACT+TGG | - | chr2_1:43525316-43525335 | Msa0208420:intron | 30.0% | |
| TTAAGTGAATTAGAACAGGA+TGG | - | chr2_1:43525466-43525485 | Msa0208420:intron | 30.0% | |
| GTTACAAACGTGAAACTTAA+AGG | + | chr2_1:43525636-43525655 | None:intergenic | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr2_1:43525687-43525706 | Msa0208420:intron | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | + | chr2_1:43525696-43525715 | None:intergenic | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr2_1:43525698-43525717 | Msa0208420:intron | 30.0% |
| CTTTCATATCAACTTCGTTA+AGG | - | chr2_1:43525753-43525772 | Msa0208420:intron | 30.0% | |
| TTTGTTGAGGTAATTTCAAC+TGG | - | chr2_1:43525898-43525917 | Msa0208420:CDS | 30.0% | |
| AGTGCGATTGTAAAATCAAT+TGG | - | chr2_1:43525955-43525974 | Msa0208420:CDS | 30.0% | |
| GTGCGATTGTAAAATCAATT+GGG | - | chr2_1:43525956-43525975 | Msa0208420:CDS | 30.0% | |
| !! | AAAAAAGTTTGGGTTGAACA+AGG | - | chr2_1:43526009-43526028 | Msa0208420:intron | 30.0% |
| TAAGCTAAAGAAATATGAGC+AGG | - | chr2_1:43526069-43526088 | Msa0208420:intron | 30.0% | |
| AAGCTAAAGAAATATGAGCA+GGG | - | chr2_1:43526070-43526089 | Msa0208420:intron | 30.0% | |
| ! | CAGGGTAAGTTTAATTTAGA+TGG | - | chr2_1:43526088-43526107 | Msa0208420:intron | 30.0% |
| ATTGTGATTAACACAGTCAA+TGG | + | chr2_1:43526133-43526152 | None:intergenic | 30.0% | |
| AATATTGTTTGCTTCTTTGG+TGG | - | chr2_1:43526154-43526173 | Msa0208420:intron | 30.0% | |
| ! | TAAGTTATCCAATTCTGGAA+GGG | - | chr2_1:43526254-43526273 | Msa0208420:CDS | 30.0% |
| ! | AAGGGTATATAACTACGAAA+AGG | - | chr2_1:43526272-43526291 | Msa0208420:CDS | 30.0% |
| GTATATAACTACGAAAAGGA+AGG | - | chr2_1:43526276-43526295 | Msa0208420:CDS | 30.0% | |
| CTAAGGTTGTGAAACATTTG+AGG | + | chr2_1:43521884-43521903 | None:intergenic | 35.0% | |
| AGACATATGATAGTCAGACT+AGG | - | chr2_1:43521910-43521929 | Msa0208420:CDS | 35.0% | |
| GAAATGGAGAAAGACGTAAA+TGG | - | chr2_1:43522071-43522090 | Msa0208420:CDS | 35.0% | |
| TTAGACAATGTGGAAAGGAA+TGG | - | chr2_1:43522176-43522195 | Msa0208420:intron | 35.0% | |
| !! | AAAGGAATGGATGGATTAAG+AGG | - | chr2_1:43522189-43522208 | Msa0208420:intron | 35.0% |
| ! | AGTAGAAGTGCATTACTCTT+TGG | - | chr2_1:43522243-43522262 | Msa0208420:intron | 35.0% |
| ! | CTTGATGCTCTAAACAACTT+TGG | - | chr2_1:43522835-43522854 | Msa0208420:intron | 35.0% |
| !! | GAATCACTAAAAGCATTACG+TGG | - | chr2_1:43522877-43522896 | Msa0208420:intron | 35.0% |
| CCAATTTGTGTTTCTCTCAT+AGG | + | chr2_1:43522974-43522993 | None:intergenic | 35.0% | |
| CCTATGAGAGAAACACAAAT+TGG | - | chr2_1:43522971-43522990 | Msa0208420:intron | 35.0% | |
| TTAATTGACCGGAATATCCA+TGG | - | chr2_1:43523148-43523167 | Msa0208420:intron | 35.0% | |
| GCGGTATTCAATCAAAGATT+TGG | + | chr2_1:43523198-43523217 | None:intergenic | 35.0% | |
| !! | TTTTATTTCCCGTCTTCATG+CGG | + | chr2_1:43523217-43523236 | None:intergenic | 35.0% |
| AGAGAGAAAAAGATGAAGAG+GGG | - | chr2_1:43523332-43523351 | Msa0208420:intron | 35.0% | |
| TATAGAGAGAAAACTATGGC+CGG | - | chr2_1:43523416-43523435 | Msa0208420:intron | 35.0% | |
| AACATCATTAACCAATACCC+GGG | + | chr2_1:43523563-43523582 | None:intergenic | 35.0% | |
| ATTTGACTGATATACACAGG+TGG | - | chr2_1:43523882-43523901 | Msa0208420:intron | 35.0% | |
| TTTGACTGATATACACAGGT+GGG | - | chr2_1:43523883-43523902 | Msa0208420:intron | 35.0% | |
| !! | AAACTTGAGAGTACCATTAC+TGG | - | chr2_1:43523922-43523941 | Msa0208420:intron | 35.0% |
| ACCCAAATTGCTTCTTAGTA+TGG | + | chr2_1:43524003-43524022 | None:intergenic | 35.0% | |
| AGCAACCGAATTCGTTAAAT+TGG | + | chr2_1:43524097-43524116 | None:intergenic | 35.0% | |
| TGGGTCTTTGATTACAATGA+TGG | - | chr2_1:43524207-43524226 | Msa0208420:intron | 35.0% | |
| ! | AAGTTTTTGTTGAGACCAAC+TGG | - | chr2_1:43524238-43524257 | Msa0208420:intron | 35.0% |
| ! | AGAGGGCTTTTATAATGAGA+GGG | + | chr2_1:43524447-43524466 | None:intergenic | 35.0% |
| ! | CCCTCTAAGAAATTTCTGTT+TGG | - | chr2_1:43524895-43524914 | Msa0208420:intron | 35.0% |
| TATTTCCATAATATCCCCCT+AGG | - | chr2_1:43524941-43524960 | Msa0208420:intron | 35.0% | |
| TTGTAAAGTCAGATGACCTA+GGG | + | chr2_1:43524960-43524979 | None:intergenic | 35.0% | |
| TTTGTAAAGTCAGATGACCT+AGG | + | chr2_1:43524961-43524980 | None:intergenic | 35.0% | |
| !!! | TGTTTTGTTTTGGACCTTCA+TGG | + | chr2_1:43525102-43525121 | None:intergenic | 35.0% |
| CCCCTAAAAAAATTTCGGTT+TGG | + | chr2_1:43525152-43525171 | None:intergenic | 35.0% | |
| !!! | CCAGGGTACAATATTTTTAG+GGG | + | chr2_1:43525261-43525280 | None:intergenic | 35.0% |
| ! | GTCCAGGGTACAATATTTTT+AGG | + | chr2_1:43525263-43525282 | None:intergenic | 35.0% |
| !! | TTTTAAGTGTGCTCTTCTCA+AGG | - | chr2_1:43525366-43525385 | Msa0208420:intron | 35.0% |
| TATTACAGGTTACAGAACCT+TGG | - | chr2_1:43525554-43525573 | Msa0208420:intron | 35.0% | |
| AAATGAAACTTAAAGGACCC+AGG | - | chr2_1:43525849-43525868 | Msa0208420:intron | 35.0% | |
| AATGAAACTTAAAGGACCCA+GGG | - | chr2_1:43525850-43525869 | Msa0208420:intron | 35.0% | |
| ! | TTTGCTTCTTTGGTGGTTTA+TGG | - | chr2_1:43526161-43526180 | Msa0208420:intron | 35.0% |
| TATGGAGGTTACTTAATGTG+AGG | - | chr2_1:43526179-43526198 | Msa0208420:intron | 35.0% | |
| GAGCCAATATATAGCTAATG+AGG | + | chr2_1:43526234-43526253 | None:intergenic | 35.0% | |
| CTAAGTTATCCAATTCTGGA+AGG | - | chr2_1:43526253-43526272 | Msa0208420:CDS | 35.0% | |
| GTTATATACCCTTCCAGAAT+TGG | + | chr2_1:43526265-43526284 | None:intergenic | 35.0% | |
| !! | TCAGACTAGGACTGCTTTTA+CGG | - | chr2_1:43521923-43521942 | Msa0208420:CDS | 40.0% |
| ACAATGTGGAAAGGAATGGA+TGG | - | chr2_1:43522180-43522199 | Msa0208420:intron | 40.0% | |
| ! | TCTTTGTTCGGGTTTGAGTA+AGG | - | chr2_1:43522521-43522540 | Msa0208420:intron | 40.0% |
| AAACACAAATTGGGGTAACG+AGG | - | chr2_1:43522981-43523000 | Msa0208420:intron | 40.0% | |
| GATTGAATACCGCATGAAGA+CGG | - | chr2_1:43523205-43523224 | Msa0208420:intron | 40.0% | |
| ATTGAATACCGCATGAAGAC+GGG | - | chr2_1:43523206-43523225 | Msa0208420:intron | 40.0% | |
| TCTCCAGTTTCTTCATTGAG+GGG | + | chr2_1:43523389-43523408 | None:intergenic | 40.0% | |
| CTCTCCAGTTTCTTCATTGA+GGG | + | chr2_1:43523390-43523409 | None:intergenic | 40.0% | |
| TCTCTCCAGTTTCTTCATTG+AGG | + | chr2_1:43523391-43523410 | None:intergenic | 40.0% | |
| ! | GGCCATAGTTTTCTCTCTAT+AGG | + | chr2_1:43523417-43523436 | None:intergenic | 40.0% |
| AAAACTATCCTCCAACAAGC+CGG | + | chr2_1:43523438-43523457 | None:intergenic | 40.0% | |
| ACATCATTAACCAATACCCG+GGG | + | chr2_1:43523562-43523581 | None:intergenic | 40.0% | |
| TCGAGTCACAAGAAGATGTT+GGG | + | chr2_1:43524125-43524144 | None:intergenic | 40.0% | |
| TGACTCGAGTATAGATTTGC+AGG | - | chr2_1:43524137-43524156 | Msa0208420:intron | 40.0% | |
| AGAAAAAGAACGCGTCAAAG+TGG | - | chr2_1:43524321-43524340 | Msa0208420:intron | 40.0% | |
| GTCAAAGTGGAGAAGATGAA+AGG | - | chr2_1:43524334-43524353 | Msa0208420:intron | 40.0% | |
| AAAGTGGAGAAGATGAAAGG+TGG | - | chr2_1:43524337-43524356 | Msa0208420:intron | 40.0% | |
| ! | GTAGTGCATGACCCTTTTAA+AGG | - | chr2_1:43524365-43524384 | Msa0208420:intron | 40.0% |
| GAGCATTACCTATTGACCAT+TGG | + | chr2_1:43524421-43524440 | None:intergenic | 40.0% | |
| ! | GAGAGGGCTTTTATAATGAG+AGG | + | chr2_1:43524448-43524467 | None:intergenic | 40.0% |
| AGGGGATGTTTCAAATGAGA+GGG | + | chr2_1:43524464-43524483 | None:intergenic | 40.0% | |
| TAGGGGATGTTTCAAATGAG+AGG | + | chr2_1:43524465-43524484 | None:intergenic | 40.0% | |
| TGTAAAGTCAGATGACCTAG+GGG | + | chr2_1:43524959-43524978 | None:intergenic | 40.0% | |
| TACAAATTCGATGATCTGGC+AGG | - | chr2_1:43524975-43524994 | Msa0208420:intron | 40.0% | |
| ACAAATTCGATGATCTGGCA+GGG | - | chr2_1:43524976-43524995 | Msa0208420:intron | 40.0% | |
| CCCCTAAAAATATTGTACCC+TGG | - | chr2_1:43525258-43525277 | Msa0208420:intron | 40.0% | |
| TAAACAGACTTGGATTACCC+TGG | - | chr2_1:43525326-43525345 | Msa0208420:intron | 40.0% | |
| GTTGAGGTAATTTCAACTGG+TGG | - | chr2_1:43525901-43525920 | Msa0208420:CDS | 40.0% | |
| !! | GGCTCTAAGTTATCCAATTC+TGG | - | chr2_1:43526249-43526268 | Msa0208420:CDS | 40.0% |
| ATAACTACGAAAAGGAAGGG+TGG | - | chr2_1:43526280-43526299 | Msa0208420:CDS | 40.0% | |
| TAACTACGAAAAGGAAGGGT+GGG | - | chr2_1:43526281-43526300 | Msa0208420:CDS | 40.0% | |
| !! | CTAGGACTGCTTTTACGGTA+TGG | - | chr2_1:43521928-43521947 | Msa0208420:CDS | 45.0% |
| GGAGAAAGACGTAAATGGAG+AGG | - | chr2_1:43522076-43522095 | Msa0208420:CDS | 45.0% | |
| !! | ATGGATGGATTAAGAGGTCC+AGG | - | chr2_1:43522195-43522214 | Msa0208420:intron | 45.0% |
| TTAAGAGGTCCAGGTCTTAG+TGG | - | chr2_1:43522204-43522223 | Msa0208420:intron | 45.0% | |
| AGATGAAGAGGGGTGATTTC+AGG | - | chr2_1:43523342-43523361 | Msa0208420:intron | 45.0% | |
| ! | CTTCATTGAGGGGTGGTTTT+GGG | + | chr2_1:43523379-43523398 | None:intergenic | 45.0% |
| ! | TCTTCATTGAGGGGTGGTTT+TGG | + | chr2_1:43523380-43523399 | None:intergenic | 45.0% |
| CATCATTAACCAATACCCGG+GGG | + | chr2_1:43523561-43523580 | None:intergenic | 45.0% | |
| CTCGAGTCACAAGAAGATGT+TGG | + | chr2_1:43524126-43524145 | None:intergenic | 45.0% | |
| CTCGAGTATAGATTTGCAGG+TGG | - | chr2_1:43524140-43524159 | Msa0208420:intron | 45.0% | |
| GATGACCTAGGGGGATATTA+TGG | + | chr2_1:43524949-43524968 | None:intergenic | 45.0% | |
| GTAAAGTCAGATGACCTAGG+GGG | + | chr2_1:43524958-43524977 | None:intergenic | 45.0% | |
| CAAATTCGATGATCTGGCAG+GGG | - | chr2_1:43524977-43524996 | Msa0208420:intron | 45.0% | |
| AAATTCGATGATCTGGCAGG+GGG | - | chr2_1:43524978-43524997 | Msa0208420:intron | 45.0% | |
| GGAGACGAAATTTGCCATGA+AGG | - | chr2_1:43525085-43525104 | Msa0208420:intron | 45.0% | |
| CGTGAAACTTAAAGGACCCA+GGG | + | chr2_1:43525628-43525647 | None:intergenic | 45.0% | |
| ACGTGAAACTTAAAGGACCC+AGG | + | chr2_1:43525629-43525648 | None:intergenic | 45.0% | |
| TTTAGGCCAAATACCTCCCT+GGG | + | chr2_1:43525869-43525888 | None:intergenic | 45.0% | |
| ATTTAGGCCAAATACCTCCC+TGG | + | chr2_1:43525870-43525889 | None:intergenic | 45.0% | |
| TTCATTCCACCAACTCATCG+AGG | + | chr2_1:43525929-43525948 | None:intergenic | 45.0% | |
| ! | GCTTCTTTGGTGGTTTATGG+AGG | - | chr2_1:43526164-43526183 | Msa0208420:intron | 45.0% |
| !! | AATTTAATATATTAAACATA+GGG | + | chr2_1:43522593-43522612 | None:intergenic | 5.0% |
| !! | AAATTTAATATATTAAACAT+AGG | + | chr2_1:43522594-43522613 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr2_1:43522628-43522647 | None:intergenic | 5.0% |
| !!! | ATTAATTTATTTTTTATTAC+AGG | - | chr2_1:43525540-43525559 | Msa0208420:intron | 5.0% |
| TTTCCACTGCCACTAAGACC+TGG | + | chr2_1:43522216-43522235 | None:intergenic | 50.0% | |
| CCAGTTTCTTCATTGAGGGG+TGG | + | chr2_1:43523386-43523405 | None:intergenic | 50.0% | |
| CCACCCCTCAATGAAGAAAC+TGG | - | chr2_1:43523383-43523402 | Msa0208420:intron | 50.0% | |
| !! | GAAAACTATGGCCGGCTTGT+TGG | - | chr2_1:43523424-43523443 | Msa0208420:intron | 50.0% |
| GTGGAGGAGATAGCCAGTAA+TGG | + | chr2_1:43523938-43523957 | None:intergenic | 50.0% | |
| ATTGTACCCATCCTCTGCAG+TGG | + | chr2_1:43523957-43523976 | None:intergenic | 50.0% | |
| GTGGAGAAGATGAAAGGTGG+AGG | - | chr2_1:43524340-43524359 | Msa0208420:intron | 50.0% | |
| AATTCGATGATCTGGCAGGG+GGG | - | chr2_1:43524979-43524998 | Msa0208420:intron | 50.0% | |
| AGAGGAGTAGCTGTGAGCAT+GGG | + | chr2_1:43525300-43525319 | None:intergenic | 50.0% | |
| TAGAGGAGTAGCTGTGAGCA+TGG | + | chr2_1:43525301-43525320 | None:intergenic | 50.0% | |
| ACAGACTTGGATTACCCTGG+TGG | - | chr2_1:43525329-43525348 | Msa0208420:intron | 50.0% | |
| ! | TTGGATTACCCTGGTGGTGT+TGG | - | chr2_1:43525335-43525354 | Msa0208420:intron | 50.0% |
| TTCAAGGCCAAATACCTCCC+TGG | - | chr2_1:43525608-43525627 | Msa0208420:intron | 50.0% | |
| TCAAGGCCAAATACCTCCCT+GGG | - | chr2_1:43525609-43525628 | Msa0208420:intron | 50.0% | |
| !! | AAAGGACCCAGGGAGGTATT+TGG | + | chr2_1:43525860-43525879 | None:intergenic | 50.0% |
| GAAACTTAAAGGACCCAGGG+AGG | + | chr2_1:43525853-43525872 | None:intergenic | 50.0% | |
| GAAACTTAAAGGACCCAGGG+AGG | - | chr2_1:43525853-43525872 | Msa0208420:intron | 50.0% | |
| !! | AAAGGACCCAGGGAGGTATT+TGG | - | chr2_1:43525860-43525879 | Msa0208420:intron | 50.0% |
| ACCGGAATATCCATGGCCTC+CGG | - | chr2_1:43523155-43523174 | Msa0208420:intron | 55.0% | |
| TCCGGAGGCCATGGATATTC+CGG | + | chr2_1:43523159-43523178 | None:intergenic | 55.0% | |
| CGTCAACGTTACAGATCCGG+AGG | + | chr2_1:43523174-43523193 | None:intergenic | 55.0% | |
| GGGCGTCAACGTTACAGATC+CGG | + | chr2_1:43523177-43523196 | None:intergenic | 55.0% | |
| !! | AACTATGGCCGGCTTGTTGG+AGG | - | chr2_1:43523427-43523446 | Msa0208420:intron | 55.0% |
| ATCTCCTCCACTGCAGAGGA+TGG | - | chr2_1:43523947-43523966 | Msa0208420:intron | 55.0% | |
| TCTCCTCCACTGCAGAGGAT+GGG | - | chr2_1:43523948-43523967 | Msa0208420:intron | 55.0% | |
| !! | TTACCCTGGTGGTGTTGGCT+TGG | - | chr2_1:43525340-43525359 | Msa0208420:intron | 55.0% |
| !! | TACCCTGGTGGTGTTGGCTT+GGG | - | chr2_1:43525341-43525360 | Msa0208420:intron | 55.0% |
| AGATGGTGCAGCAGTGCTCA+TGG | - | chr2_1:43526105-43526124 | Msa0208420:intron | 55.0% | |
| GGTCCAGGTCTTAGTGGCAG+TGG | - | chr2_1:43522210-43522229 | Msa0208420:intron | 60.0% | |
| CGTTACAGATCCGGAGGCCA+TGG | + | chr2_1:43523168-43523187 | None:intergenic | 60.0% | |
| ! | GAAATGCTAACGGGTGCCCC+CGG | - | chr2_1:43523542-43523561 | Msa0208420:intron | 60.0% |
| ! | AAATGCTAACGGGTGCCCCC+GGG | - | chr2_1:43523543-43523562 | Msa0208420:intron | 60.0% |
| TGCCACCCTTAACCAGTGCC+CGG | - | chr2_1:43523681-43523700 | Msa0208420:intron | 60.0% | |
| GGCTATCTCCTCCACTGCAG+AGG | - | chr2_1:43523943-43523962 | Msa0208420:intron | 60.0% | |
| GTACCCATCCTCTGCAGTGG+AGG | + | chr2_1:43523954-43523973 | None:intergenic | 60.0% | |
| GAGTAGCTGTGAGCATGGGC+GGG | + | chr2_1:43525296-43525315 | None:intergenic | 60.0% | |
| GGAGTAGCTGTGAGCATGGG+CGG | + | chr2_1:43525297-43525316 | None:intergenic | 60.0% | |
| CTCCCAAGCCAACACCACCA+GGG | + | chr2_1:43525346-43525365 | None:intergenic | 60.0% | |
| ACTCCCAAGCCAACACCACC+AGG | + | chr2_1:43525347-43525366 | None:intergenic | 60.0% | |
| CTGGTGGCTCCTCGATGAGT+TGG | - | chr2_1:43525917-43525936 | Msa0208420:CDS | 60.0% | |
| ! | GTGGCTCCTCGATGAGTTGG+TGG | - | chr2_1:43525920-43525939 | Msa0208420:CDS | 60.0% |
| ! | TAACGGGTGCCCCCGGGTAT+TGG | - | chr2_1:43523549-43523568 | Msa0208420:intron | 65.0% |
| GCCACCCTTAACCAGTGCCC+GGG | - | chr2_1:43523682-43523701 | Msa0208420:intron | 65.0% | |
| CCACCCTTAACCAGTGCCCG+GGG | - | chr2_1:43523683-43523702 | Msa0208420:intron | 65.0% | |
| CACCCTTAACCAGTGCCCGG+GGG | - | chr2_1:43523684-43523703 | Msa0208420:intron | 65.0% | |
| !! | TGCCCCCGGGCACTGGTTAA+GGG | + | chr2_1:43523689-43523708 | None:intergenic | 65.0% |
| TCATGCTAACCGCTGCCCCC+GGG | + | chr2_1:43523702-43523721 | None:intergenic | 65.0% | |
| GTCATGCTAACCGCTGCCCC+CGG | + | chr2_1:43523703-43523722 | None:intergenic | 65.0% | |
| !! | CCCCGGGCACTGGTTAAGGG+TGG | + | chr2_1:43523686-43523705 | None:intergenic | 70.0% |
| !! | CTGCCCCCGGGCACTGGTTA+AGG | + | chr2_1:43523690-43523709 | None:intergenic | 70.0% |
| TAACCAGTGCCCGGGGGCAG+CGG | - | chr2_1:43523690-43523709 | Msa0208420:intron | 70.0% | |
| GTGAGCATGGGCGGGAGCAG+CGG | + | chr2_1:43525288-43525307 | None:intergenic | 70.0% | |
| TAACCGCTGCCCCCGGGCAC+TGG | + | chr2_1:43523696-43523715 | None:intergenic | 75.0% | |
| ! | GCGGGAGCAGCGGCCGTCCA+GGG | + | chr2_1:43525278-43525297 | None:intergenic | 80.0% |
| ! | GGCGGGAGCAGCGGCCGTCC+AGG | + | chr2_1:43525279-43525298 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 43521861 | 43526306 | 43521861 | ID=Msa0208420;Name=Msa0208420 |
| chr2_1 | mRNA | 43521861 | 43526306 | 43521861 | ID=Msa0208420-mRNA-1;Parent=Msa0208420;Name=Msa0208420-mRNA-1;_AED=0.45;_eAED=0.53;_QI=0|0|0|1|0|0|3|0|147 |
| chr2_1 | exon | 43526223 | 43526306 | 43526223 | ID=Msa0208420-mRNA-1:exon:12859;Parent=Msa0208420-mRNA-1 |
| chr2_1 | exon | 43525885 | 43525987 | 43525885 | ID=Msa0208420-mRNA-1:exon:12858;Parent=Msa0208420-mRNA-1 |
| chr2_1 | exon | 43521861 | 43522117 | 43521861 | ID=Msa0208420-mRNA-1:exon:12857;Parent=Msa0208420-mRNA-1 |
| chr2_1 | CDS | 43526223 | 43526306 | 43526223 | ID=Msa0208420-mRNA-1:cds;Parent=Msa0208420-mRNA-1 |
| chr2_1 | CDS | 43525885 | 43525987 | 43525885 | ID=Msa0208420-mRNA-1:cds;Parent=Msa0208420-mRNA-1 |
| chr2_1 | CDS | 43521861 | 43522117 | 43521861 | ID=Msa0208420-mRNA-1:cds;Parent=Msa0208420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
