AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0209240


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209240 MtrunA17_Chr2g0307011 98.408 377 6 0 1 377 1 377 0.0 773
Msa0209240 MtrunA17_Chr3g0081621 34.688 320 194 5 56 366 140 453 2.44e-55 189
Msa0209240 MtrunA17_Chr8g0354091 33.841 328 195 7 48 366 41 355 8.48e-55 184
Msa0209240 MtrunA17_Chr6g0466631 34.056 323 190 6 59 366 29 343 2.64e-54 182
Msa0209240 MtrunA17_Chr1g0201341 33.538 325 191 8 57 365 27 342 1.26e-49 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209240 AT2G26830.1 63.897 349 126 0 24 372 22 370 4.28e-171 482
Msa0209240 AT4G09760.1 35.577 312 185 6 64 366 38 342 4.30e-56 187
Msa0209240 AT4G09760.2 35.577 312 185 6 64 366 38 342 4.30e-56 187
Msa0209240 AT1G74320.1 32.209 326 198 9 56 368 32 347 4.46e-53 179
Msa0209240 AT1G71697.1 29.769 346 223 7 31 365 8 344 4.82e-48 166
Msa0209240 AT4G09760.3 30.208 192 126 4 64 253 38 223 5.54e-22 94.4
Msa0209240 AT4G09760.4 29.143 175 116 4 64 236 38 206 6.39e-18 82.0

Find 97 sgRNAs with CRISPR-Local

Find 748 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAGATATCATTCCATAAT+TGG 0.099867 2_1:-46630570 None:intergenic
TGATATTGTTCGTTCATATT+TGG 0.100547 2_1:-46636352 None:intergenic
TCTCACAATGACTTGCTTTC+TGG 0.116891 2_1:+46635180 Msa0209240:CDS
TTGCAGTTGTTTGGCTATTT+TGG 0.127146 2_1:-46630509 None:intergenic
GCAGCATCTGTTCTAGAATT+TGG 0.157391 2_1:+46631913 Msa0209240:intron
TTTAAAGTTGAGAAAATTTC+TGG 0.169623 2_1:+46627969 Msa0209240:CDS
GCTAAGTGGCTTGGAATATT+TGG 0.191747 2_1:+46629362 Msa0209240:CDS
CAATAATATAATACTAATAA+TGG 0.204970 2_1:+46627262 Msa0209240:exon
TCCTATTCTGTCTTTCGAAT+TGG 0.255059 2_1:-46627098 None:intergenic
CCCAATTATGGAATGATATC+TGG 0.258364 2_1:+46630569 Msa0209240:CDS
TCTACTCATTCCTTTCTAAA+AGG 0.267387 2_1:-46637693 None:intergenic
GATATTGTTCGTTCATATTT+GGG 0.276266 2_1:-46636351 None:intergenic
CCAGATATCATTCCATAATT+GGG 0.278940 2_1:-46630569 None:intergenic
GTATTGTAATCCAGAAAATT+AGG 0.282777 2_1:+46637902 Msa0209240:three_prime_UTR
TACATCACTGCTGCAGGATT+TGG 0.299530 2_1:+46629338 Msa0209240:CDS
CCAATAGAATTTGATTATCT+TGG 0.305896 2_1:+46637601 Msa0209240:CDS
CAAGATAATCAAATTCTATT+GGG 0.308596 2_1:-46637600 None:intergenic
GCTCTAAGGAACCCCAATTA+TGG 0.311734 2_1:+46630557 Msa0209240:CDS
CCTATTCTGTCTTTCGAATT+GGG 0.312336 2_1:-46627097 None:intergenic
CCAAGATAATCAAATTCTAT+TGG 0.314209 2_1:-46637601 None:intergenic
ACTACGATCAAGGCAAATTT+AGG 0.324943 2_1:+46637845 Msa0209240:three_prime_UTR
AAAGGAGAATGGTGTTTATT+CGG 0.342021 2_1:-46627125 None:intergenic
AACATTTAACTACATGAATC+AGG 0.346353 2_1:-46637765 None:intergenic
TCAATGATATGCTCGGTGTT+GGG 0.351100 2_1:-46628279 None:intergenic
TTCAAGACCTGGTCAAGTTT+AGG 0.351629 2_1:+46627936 Msa0209240:CDS
TGGATTACAATACAACAATA+AGG 0.362339 2_1:-46637892 None:intergenic
ACGAACAATATCATTTCTTC+AGG 0.383658 2_1:+46636362 Msa0209240:CDS
AGGACTAGTGATCATTTCAT+TGG 0.387701 2_1:+46627063 Msa0209240:five_prime_UTR
GCTTGTTCTGCGATTTCAAC+GGG 0.403905 2_1:-46627308 None:intergenic
TGATCGCTTTCGAGAATTGC+AGG 0.404652 2_1:+46628299 Msa0209240:CDS
TTCAGATGACATAATTTGTT+CGG 0.410215 2_1:+46638011 Msa0209240:three_prime_UTR
TGTGGAAATTCCAGGCTCTA+AGG 0.418229 2_1:+46630543 Msa0209240:CDS
ATTACCTCTTGAGGTCTGTC+TGG 0.424572 2_1:-46636397 None:intergenic
TGGCTTGGAATATTTGGAAA+TGG 0.427165 2_1:+46629368 Msa0209240:CDS
ATCAATGATATGCTCGGTGT+TGG 0.428005 2_1:-46628280 None:intergenic
ATTATAACCATCAGATTGTA+TGG 0.431135 2_1:+46628255 Msa0209240:CDS
AATAATATAATACTAATAAT+GGG 0.437841 2_1:+46627263 Msa0209240:exon
AAGGGAAAGAGAAGGATCAA+TGG 0.457811 2_1:-46627372 None:intergenic
ATCAAATACATCACTGCTGC+AGG 0.459460 2_1:+46629332 Msa0209240:CDS
TGGGTGGAAAAGTTAAGATC+TGG 0.470594 2_1:+46627282 Msa0209240:CDS
GTATGCGCTCACTACGATCA+AGG 0.474926 2_1:+46637835 Msa0209240:three_prime_UTR
GCGCATACTCTTGCTCCATC+AGG 0.478124 2_1:+46629413 Msa0209240:CDS
AGATATGCGAGAACCAAAAC+TGG 0.481384 2_1:+46630483 Msa0209240:intron
AATTGGGGTTCCTTAGAGCC+TGG 0.484263 2_1:-46630553 None:intergenic
TATTATTGAATCGATGAGAA+AGG 0.485724 2_1:-46627247 None:intergenic
TTCGATACAACGAGTACAAA+AGG 0.487153 2_1:+46637635 Msa0209240:CDS
TAGGCCTTTAGTTTGAGCTC+TGG 0.487772 2_1:+46637864 Msa0209240:three_prime_UTR
AGCTTGTTCTGCGATTTCAA+CGG 0.491199 2_1:-46627309 None:intergenic
TTACAAGACAGTTTCATTCA+AGG 0.491822 2_1:+46631957 Msa0209240:CDS
AACTACAGAGGCTATGACAT+AGG 0.495161 2_1:+46636166 Msa0209240:CDS
CATTCTTTCTAGATGTATTG+TGG 0.495682 2_1:+46637942 Msa0209240:three_prime_UTR
TCTTAAAACTTTGTATGTTG+AGG 0.497216 2_1:+46637423 Msa0209240:CDS
TGATGAAATTTATGAGCTCC+AGG 0.497219 2_1:+46631987 Msa0209240:CDS
TTTCACGGTGTGGAAATTCC+AGG 0.499815 2_1:+46630535 Msa0209240:CDS
TGCAGCAGTGATGTATTTGA+TGG 0.502189 2_1:-46629330 None:intergenic
TTGAAATCGCAGAACAAGCT+CGG 0.518498 2_1:+46627312 Msa0209240:CDS
GGATCAATGGAGAGAAGAGA+AGG 0.518927 2_1:-46627359 None:intergenic
CAATGATATGCTCGGTGTTG+GGG 0.521995 2_1:-46628278 None:intergenic
ATGACGAGAGGTGTCATTTG+AGG 0.522794 2_1:-46627395 None:intergenic
GGATTTGGTGCTAAGTGGCT+TGG 0.523784 2_1:+46629353 Msa0209240:CDS
GCTACCAGAGCTCAAACTAA+AGG 0.526105 2_1:-46637868 None:intergenic
CTGCAGGATTTGGTGCTAAG+TGG 0.526710 2_1:+46629348 Msa0209240:CDS
GAAAGAAAAGCTTGTATCGA+TGG 0.527863 2_1:+46637660 Msa0209240:CDS
AATCACTTTGCAGAATATGC+TGG 0.528361 2_1:+46636190 Msa0209240:CDS
CTGAAGGTTTCAGTTAAACA+AGG 0.534256 2_1:+46628216 Msa0209240:CDS
AGATAGTTTCTACTTCATCA+AGG 0.534604 2_1:+46637715 Msa0209240:three_prime_UTR
CAGATATCATTCCATAATTG+GGG 0.535171 2_1:-46630568 None:intergenic
ATAATGATTAATCATGAAGA+AGG 0.535615 2_1:+46635207 Msa0209240:CDS
CCCAATTCGAAAGACAGAAT+AGG 0.536024 2_1:+46627097 Msa0209240:five_prime_UTR
CGAGAGGTGTCATTTGAGGA+AGG 0.544148 2_1:-46627391 None:intergenic
ACTACAGAGGCTATGACATA+GGG 0.549695 2_1:+46636167 Msa0209240:CDS
ACAGCCAGACAGACCTCAAG+AGG 0.575109 2_1:+46636393 Msa0209240:CDS
TGAATGCAGTAATTTGTGCA+AGG 0.578273 2_1:+46627908 Msa0209240:intron
GTCTTTCGAATTGGGCGGTG+TGG 0.581990 2_1:-46627089 None:intergenic
TGAGGTAAATACATATGCAC+TGG 0.582931 2_1:+46637441 Msa0209240:CDS
ACTGTGATTATTACCTCTTG+AGG 0.585155 2_1:-46636406 None:intergenic
CTCATTCCTTTCTAAAAGGT+AGG 0.596387 2_1:-46637689 None:intergenic
ATGTTTGTGAGAATGAGAAA+AGG 0.598143 2_1:-46627143 None:intergenic
CGATGAGAAAGGTTCAGAGG+TGG 0.602328 2_1:-46627236 None:intergenic
AAGATAATCAAATTCTATTG+GGG 0.603378 2_1:-46637599 None:intergenic
AAAGCGATCAATGATATGCT+CGG 0.607018 2_1:-46628286 None:intergenic
GAGAGGTGTCATTTGAGGAA+GGG 0.608013 2_1:-46627390 None:intergenic
ATTTGAGGAAGGGAAAGAGA+AGG 0.609170 2_1:-46627380 None:intergenic
TGAGAATGAGAAAAGGAGAA+TGG 0.613006 2_1:-46627136 None:intergenic
AAAGTTGAGAAAATTTCTGG+AGG 0.619890 2_1:+46627972 Msa0209240:CDS
GCAAGGACATGTTCAAGACC+TGG 0.621936 2_1:+46627925 Msa0209240:CDS
GTTGGGGCCATACAATCTGA+TGG 0.622325 2_1:-46628262 None:intergenic
AGAATCACCTAAACTTGACC+AGG 0.623881 2_1:-46627943 None:intergenic
ACATTTAACTACATGAATCA+GGG 0.626795 2_1:-46637764 None:intergenic
GAAGGTTTCAGTTAAACAAG+GGG 0.631491 2_1:+46628218 Msa0209240:CDS
AATATAATACTAATAATGGG+TGG 0.636817 2_1:+46627266 Msa0209240:exon
TGAAGGTTTCAGTTAAACAA+GGG 0.637167 2_1:+46628217 Msa0209240:CDS
AATCGATGAGAAAGGTTCAG+AGG 0.640508 2_1:-46627239 None:intergenic
ATTCTGTCTTTCGAATTGGG+CGG 0.659114 2_1:-46627094 None:intergenic
AGAGTTACTGACATGACGAG+AGG 0.684298 2_1:-46627407 None:intergenic
CAGAGACCAGAAAAGGTGTG+AGG 0.696052 2_1:-46637464 None:intergenic
TATGCATCATACAACTACAG+AGG 0.713439 2_1:+46636154 Msa0209240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAATAAAAAAT+GGG - chr2_1:46628632-46628651 None:intergenic 0.0%
!! CAATAATATAATACTAATAA+TGG + chr2_1:46627262-46627281 Msa0209240:exon 10.0%
!!! AATTTGAATTATTTAGTTTT+GGG + chr2_1:46627824-46627843 Msa0209240:intron 10.0%
!!! TATGATAATTTTGAATTTAT+TGG - chr2_1:46629080-46629099 None:intergenic 10.0%
!!! AATGAATTTTAAACAAATTA+TGG - chr2_1:46632410-46632429 None:intergenic 10.0%
!! TAATTAAATAAAAATTAAGG+TGG + chr2_1:46632440-46632459 Msa0209240:intron 10.0%
!! AAGCTAATAAAATAAATTAT+TGG - chr2_1:46633116-46633135 None:intergenic 10.0%
!! TACATTTCAAATTATATAAA+CGG - chr2_1:46633286-46633305 None:intergenic 10.0%
!!! GAAATAAATATTTATTGTTT+TGG - chr2_1:46635447-46635466 None:intergenic 10.0%
!! AGATTTACTAATAAATAAAT+AGG - chr2_1:46636071-46636090 None:intergenic 10.0%
!!! GAATTTGAATTATTTAGTTT+TGG + chr2_1:46627823-46627842 Msa0209240:intron 15.0%
!!! ATTTGAATTATTTAGTTTTG+GGG + chr2_1:46627825-46627844 Msa0209240:intron 15.0%
!!! TTTTTAAAGATTAATGGAAA+AGG + chr2_1:46628696-46628715 Msa0209240:intron 15.0%
!!! TTTTAAAGATTAATGGAAAA+GGG + chr2_1:46628697-46628716 Msa0209240:intron 15.0%
!!! ATGAAATACATTTTAAATTC+TGG - chr2_1:46628916-46628935 None:intergenic 15.0%
!! TAATATGTATTAAGTTATCA+TGG - chr2_1:46629845-46629864 None:intergenic 15.0%
!! TGAGATTTAATTAAAAAAGT+TGG - chr2_1:46629887-46629906 None:intergenic 15.0%
!!! ATTTCTTTTTCTTGAATTTT+GGG - chr2_1:46631056-46631075 None:intergenic 15.0%
!!! AATTTCTTTTTCTTGAATTT+TGG - chr2_1:46631057-46631076 None:intergenic 15.0%
!!! TGAATTTTAAGTAATGTTTA+AGG - chr2_1:46631302-46631321 None:intergenic 15.0%
!! ATAGAAAAAGTTAGATAATA+AGG - chr2_1:46631794-46631813 None:intergenic 15.0%
!!! AAAACTTTTAGATTTAAGAT+TGG + chr2_1:46632123-46632142 Msa0209240:intron 15.0%
!! ATTAAATAACAAAATTAAGG+TGG - chr2_1:46632740-46632759 None:intergenic 15.0%
!! AATATTATATATGCATAACT+TGG + chr2_1:46633462-46633481 Msa0209240:intron 15.0%
!!! AAATATTAAGTTTTATTCCT+AGG + chr2_1:46634327-46634346 Msa0209240:intron 15.0%
!! AAAACCAAATAAATAGAAAT+TGG + chr2_1:46634888-46634907 Msa0209240:intron 15.0%
!! TAATCCAATTTCTATTTATT+TGG - chr2_1:46634895-46634914 None:intergenic 15.0%
!!! TATATTTTTTATTTTGCAAC+AGG + chr2_1:46635122-46635141 Msa0209240:intron 15.0%
!! TAGTTTATAATAAAGTCATA+AGG + chr2_1:46635962-46635981 Msa0209240:intron 15.0%
!!! ATATAGGTTATTTTCTTTTT+CGG + chr2_1:46637348-46637367 Msa0209240:intron 15.0%
!!! TAACTACTTTTTTTTTTATC+AGG - chr2_1:46637792-46637811 None:intergenic 15.0%
!!! AATATAATACTAATAATGGG+TGG + chr2_1:46627266-46627285 Msa0209240:exon 20.0%
!! AAAGTGAAAAAATTTGCAAA+AGG - chr2_1:46627467-46627486 None:intergenic 20.0%
!!! CAAGCAATCATTTTTTTTTA+AGG - chr2_1:46627651-46627670 None:intergenic 20.0%
!! CTTAAAAAAAAATGATTGCT+TGG + chr2_1:46627649-46627668 Msa0209240:intron 20.0%
!! TTCTAATTACTTAGTTATTG+CGG + chr2_1:46627740-46627759 Msa0209240:intron 20.0%
!! ACATTTCAATTTCTTTGATT+TGG + chr2_1:46627774-46627793 Msa0209240:intron 20.0%
!!! TTTAAAGTTGAGAAAATTTC+TGG + chr2_1:46627969-46627988 Msa0209240:CDS 20.0%
!! ACAAAAAGTAATAATTAAGC+TGG - chr2_1:46628073-46628092 None:intergenic 20.0%
!! AAGTGTTTGTAATAATTAGT+TGG + chr2_1:46628131-46628150 Msa0209240:intron 20.0%
!! ATCAATAAAACAACAAAAGT+GGG - chr2_1:46628543-46628562 None:intergenic 20.0%
!! AAAAAATTGAAGATTTGAGT+GGG - chr2_1:46628592-46628611 None:intergenic 20.0%
!!! TCAAATCTTCAATTTTTTGT+TGG + chr2_1:46628594-46628613 Msa0209240:intron 20.0%
!! TTTAAAGATTAATGGAAAAG+GGG + chr2_1:46628698-46628717 Msa0209240:intron 20.0%
!! AATAACAAAGATTATGAAGA+GGG + chr2_1:46629037-46629056 Msa0209240:intron 20.0%
!!! TTTTTTAAATTTGTACCTGA+TGG - chr2_1:46629431-46629450 None:intergenic 20.0%
!! TATTATCTAGGGATAATATT+AGG + chr2_1:46629617-46629636 Msa0209240:intron 20.0%
!! ATTATCTAGGGATAATATTA+GGG + chr2_1:46629618-46629637 Msa0209240:intron 20.0%
!! TATGCTAGAAAAATGAAAAT+TGG + chr2_1:46629938-46629957 Msa0209240:intron 20.0%
!! AAATAAAATACCAAAGAAAG+TGG + chr2_1:46630057-46630076 Msa0209240:intron 20.0%
!! AGTAAGTTATACTATGATAT+TGG + chr2_1:46630365-46630384 Msa0209240:intron 20.0%
!! CAAAGTTCATATTAGTTATA+GGG - chr2_1:46630624-46630643 None:intergenic 20.0%
!! TCAAAGTTCATATTAGTTAT+AGG - chr2_1:46630625-46630644 None:intergenic 20.0%
!!! TATTTCTGTAATTTTTGCTA+AGG + chr2_1:46630670-46630689 Msa0209240:intron 20.0%
!! ACTTGATCAGTATATTAAAA+TGG + chr2_1:46630965-46630984 Msa0209240:intron 20.0%
!!! TTTCTTTTTCTTGAATTTTG+GGG - chr2_1:46631055-46631074 None:intergenic 20.0%
!! ATTGTATTATTGAATGTAGA+TGG + chr2_1:46631074-46631093 Msa0209240:intron 20.0%
!! TTGTATTATTGAATGTAGAT+GGG + chr2_1:46631075-46631094 Msa0209240:intron 20.0%
!!! GTATTTCTTTTTGAACAATA+TGG - chr2_1:46631272-46631291 None:intergenic 20.0%
!! TTCCTATCATATATCTTTAA+AGG + chr2_1:46631844-46631863 Msa0209240:intron 20.0%
!!! AACCTTTAAAGATATATGAT+AGG - chr2_1:46631849-46631868 None:intergenic 20.0%
!!! TATCATATATCTTTAAAGGT+TGG + chr2_1:46631848-46631867 Msa0209240:intron 20.0%
!! CAAATGAAAACAAAAAGTTA+AGG - chr2_1:46631894-46631913 None:intergenic 20.0%
!! AAAGTGATCAAAAATTTAAC+AGG - chr2_1:46632166-46632185 None:intergenic 20.0%
!!! ATGCATTTAGTTTATTTTCA+GGG - chr2_1:46632633-46632652 None:intergenic 20.0%
!! AATAGTAGGAAAAAACTTAT+GGG - chr2_1:46632967-46632986 None:intergenic 20.0%
!! AAATAGTAGGAAAAAACTTA+TGG - chr2_1:46632968-46632987 None:intergenic 20.0%
!!! TGCGTATATAAATGAAATTT+TGG + chr2_1:46633031-46633050 Msa0209240:intron 20.0%
!!! TTATGAGTTTTGATAGATTT+TGG - chr2_1:46633067-46633086 None:intergenic 20.0%
!!! ACTGAAATGTTAAGTTATTT+TGG - chr2_1:46633152-46633171 None:intergenic 20.0%
!! ATTTCAATGTTGCTAAAAAA+TGG - chr2_1:46633210-46633229 None:intergenic 20.0%
!! TTAATATGTGTCTTGTAAAT+AGG - chr2_1:46633383-46633402 None:intergenic 20.0%
!! CCAAGATATTTATTACAAAA+CGG + chr2_1:46634094-46634113 Msa0209240:intron 20.0%
!!! CTTTGGTAAATTCTTTAAAA+TGG + chr2_1:46635038-46635057 Msa0209240:intron 20.0%
!! ATAATGATTAATCATGAAGA+AGG + chr2_1:46635207-46635226 Msa0209240:CDS 20.0%
!! TAAATGCAACATACAAAAAA+TGG - chr2_1:46635386-46635405 None:intergenic 20.0%
!!! TTTCTTCAATAGTTTTGAAA+TGG + chr2_1:46635636-46635655 Msa0209240:intron 20.0%
!!! TATTCAATATTTTATCATGC+AGG + chr2_1:46636326-46636345 Msa0209240:intron 20.0%
!!! TTGTCTTTTTATTTGACTTT+TGG + chr2_1:46636613-46636632 Msa0209240:intron 20.0%
!!! TGTCTTTTTATTTGACTTTT+GGG + chr2_1:46636614-46636633 Msa0209240:intron 20.0%
!! ATTAATCTCAAATTGATACT+TGG + chr2_1:46636706-46636725 Msa0209240:intron 20.0%
!!! TAATCCTATTTTTGTAGAAT+AGG + chr2_1:46636845-46636864 Msa0209240:intron 20.0%
!!! AATCCTATTTTTGTAGAATA+GGG + chr2_1:46636846-46636865 Msa0209240:intron 20.0%
!!! TAATCTTTTACGATTCAAAT+CGG - chr2_1:46636879-46636898 None:intergenic 20.0%
!! GTACTATATAACTGTAATAT+AGG + chr2_1:46637332-46637351 Msa0209240:intron 20.0%
!! TTAATACCAATTCATAATAC+AGG + chr2_1:46637387-46637406 Msa0209240:intron 20.0%
!! TCTTATTAAAATGATATCCA+TGG + chr2_1:46637537-46637556 Msa0209240:intron 20.0%
!! TATTTCTTTGCATAATAAAC+AGG + chr2_1:46637567-46637586 Msa0209240:intron 20.0%
!! AAGATAATCAAATTCTATTG+GGG - chr2_1:46637602-46637621 None:intergenic 20.0%
!! CAAGATAATCAAATTCTATT+GGG - chr2_1:46637603-46637622 None:intergenic 20.0%
!!! GATCTTTACAAATTTTGATA+TGG + chr2_1:46637966-46637985 Msa0209240:three_prime_UTR 20.0%
! TATTATTGAATCGATGAGAA+AGG - chr2_1:46627250-46627269 None:intergenic 25.0%
!!! ACATTTCCCTTTTTTTAAAC+CGG - chr2_1:46627601-46627620 None:intergenic 25.0%
! AAAAAAAGGGAAATGTTAAC+TGG + chr2_1:46627605-46627624 Msa0209240:intron 25.0%
!!! ATTTCTTTGATTTGGACTAA+TGG + chr2_1:46627782-46627801 Msa0209240:intron 25.0%
!!! TTTCTTTGATTTGGACTAAT+GGG + chr2_1:46627783-46627802 Msa0209240:intron 25.0%
!!! TTATTACTTTTTGTTCATCC+TGG + chr2_1:46628079-46628098 Msa0209240:intron 25.0%
!!! TATTACTTTTTGTTCATCCT+GGG + chr2_1:46628080-46628099 Msa0209240:intron 25.0%
!! ATCAAATATCAACTAGTTTG+AGG - chr2_1:46628174-46628193 None:intergenic 25.0%
!!! TTCATTATTTTCAGTACTGA+AGG + chr2_1:46628200-46628219 Msa0209240:intron 25.0%
! ATTATAACCATCAGATTGTA+TGG + chr2_1:46628255-46628274 Msa0209240:CDS 25.0%
!! GCAATTTTATGTACAAAACA+TGG + chr2_1:46628340-46628359 Msa0209240:intron 25.0%
! GCAACATCAATACAAAATAA+TGG - chr2_1:46628387-46628406 None:intergenic 25.0%
! TAATACAGATTCACTCAAAA+GGG - chr2_1:46628511-46628530 None:intergenic 25.0%
! TCAATAAAACAACAAAAGTG+GGG - chr2_1:46628542-46628561 None:intergenic 25.0%
! CATCAATAAAACAACAAAAG+TGG - chr2_1:46628544-46628563 None:intergenic 25.0%
!!! CACTTTTGTTGTTTTATTGA+TGG + chr2_1:46628542-46628561 Msa0209240:intron 25.0%
! AAAAATTGAAGATTTGAGTG+GGG - chr2_1:46628591-46628610 None:intergenic 25.0%
! CAAAAAATTGAAGATTTGAG+TGG - chr2_1:46628593-46628612 None:intergenic 25.0%
! TTAAAGATTAATGGAAAAGG+GGG + chr2_1:46628699-46628718 Msa0209240:intron 25.0%
!! TCATTATCCTTGAGTATTTT+AGG + chr2_1:46628783-46628802 Msa0209240:intron 25.0%
!!! TACAGATGCTTTTAGTTTTT+CGG + chr2_1:46628888-46628907 Msa0209240:intron 25.0%
! AAATCTGCAGAACATATTAA+AGG - chr2_1:46628959-46628978 None:intergenic 25.0%
! TTCCTGAATATGCTTTAATA+AGG + chr2_1:46628983-46629002 Msa0209240:intron 25.0%
! CAATAACAAAGATTATGAAG+AGG + chr2_1:46629036-46629055 Msa0209240:intron 25.0%
! TTTGAATTTATTGGAAGTTC+AGG - chr2_1:46629071-46629090 None:intergenic 25.0%
!! GGTTTCTATTTTCTCATTTT+AGG - chr2_1:46629150-46629169 None:intergenic 25.0%
! TATTGTAATTGCTTGTGAAA+TGG + chr2_1:46629299-46629318 Msa0209240:intron 25.0%
! TTATCTAGGGATAATATTAG+GGG + chr2_1:46629619-46629638 Msa0209240:intron 25.0%
!! AAATTGAAATCGATTCAGAA+GGG - chr2_1:46629694-46629713 None:intergenic 25.0%
!! TAAATTGAAATCGATTCAGA+AGG - chr2_1:46629695-46629714 None:intergenic 25.0%
!!! GAAAAATGAAAATTGGTTTG+AGG + chr2_1:46629945-46629964 Msa0209240:intron 25.0%
!!! TTTGGTATTTTATTTGCAGT+GGG - chr2_1:46630052-46630071 None:intergenic 25.0%
! AATACAGGAAACAAGATAAA+CGG - chr2_1:46630208-46630227 None:intergenic 25.0%
!!! TGGAAATGGATTAGAAAATA+GGG - chr2_1:46630283-46630302 None:intergenic 25.0%
!!! TTGGAAATGGATTAGAAAAT+AGG - chr2_1:46630284-46630303 None:intergenic 25.0%
! CATCTGAATTAAGTATCATA+TGG + chr2_1:46630342-46630361 Msa0209240:intron 25.0%
! AAACAACTGCAAAAATTTCA+CGG + chr2_1:46630520-46630539 Msa0209240:CDS 25.0%
!! TAATTTTTGCTAAGGTGAAT+TGG + chr2_1:46630678-46630697 Msa0209240:intron 25.0%
!! TTCTCTCAAATTTGAAATCA+GGG - chr2_1:46630793-46630812 None:intergenic 25.0%
!! TTTCTCTCAAATTTGAAATC+AGG - chr2_1:46630794-46630813 None:intergenic 25.0%
! CATTACTTTAAACCGTTTAA+GGG - chr2_1:46631356-46631375 None:intergenic 25.0%
! GAAAAAGTTAGATAATAAGG+TGG - chr2_1:46631791-46631810 None:intergenic 25.0%
!! AATCTAAAAGTTTTCACACT+TGG - chr2_1:46632117-46632136 None:intergenic 25.0%
!!! GTTTATTTTCAGGGTTATTT+TGG - chr2_1:46632624-46632643 None:intergenic 25.0%
!!! CATGCATTTAGTTTATTTTC+AGG - chr2_1:46632634-46632653 None:intergenic 25.0%
! TGAATTTGTAGATATCATTC+CGG + chr2_1:46632711-46632730 Msa0209240:intron 25.0%
! TTCTAACTAGTATGTCATAT+AGG - chr2_1:46632874-46632893 None:intergenic 25.0%
! TTATTTATTCGCAAAACTCT+TGG - chr2_1:46633090-46633109 None:intergenic 25.0%
! TCATTATCAATGTTGTTGAA+AGG + chr2_1:46633780-46633799 Msa0209240:intron 25.0%
! CATTATCAATGTTGTTGAAA+GGG + chr2_1:46633781-46633800 Msa0209240:intron 25.0%
! ATTATCAATGTTGTTGAAAG+GGG + chr2_1:46633782-46633801 Msa0209240:intron 25.0%
!!! GTTTTTTGATTGAGAGTTTA+GGG + chr2_1:46633876-46633895 Msa0209240:intron 25.0%
!! CCGTTTTGTAATAAATATCT+TGG - chr2_1:46634097-46634116 None:intergenic 25.0%
! GATATTTGGACTTCAAATAA+TGG - chr2_1:46634200-46634219 None:intergenic 25.0%
! AAATGTGAACATCAGATATT+TGG - chr2_1:46634214-46634233 None:intergenic 25.0%
!!! ATCAATATACAGAAAGTGTT+GGG - chr2_1:46634268-46634287 None:intergenic 25.0%
!! AATCAATATACAGAAAGTGT+TGG - chr2_1:46634269-46634288 None:intergenic 25.0%
! ACAACAAAAACTCAAGTTAA+TGG + chr2_1:46634365-46634384 Msa0209240:intron 25.0%
! CAACAAAAACTCAAGTTAAT+GGG + chr2_1:46634366-46634385 Msa0209240:intron 25.0%
!! AATCTTTAGTTTAGGGATTT+AGG - chr2_1:46634424-46634443 None:intergenic 25.0%
!! TCTCTCAAATCTTTAGTTTA+GGG - chr2_1:46634431-46634450 None:intergenic 25.0%
!! TTCTCTCAAATCTTTAGTTT+AGG - chr2_1:46634432-46634451 None:intergenic 25.0%
! AGTTATGTTCACTCTATAAT+TGG + chr2_1:46634461-46634480 Msa0209240:intron 25.0%
! TAGTGACAACTATAAATAGA+TGG - chr2_1:46634531-46634550 None:intergenic 25.0%
! TATTTATAGTTGTCACTATG+AGG + chr2_1:46634533-46634552 Msa0209240:intron 25.0%
!!! TTTCACATTTTGATTGATGT+AGG - chr2_1:46634745-46634764 None:intergenic 25.0%
! TGATAAATCTACTTCATGAA+TGG - chr2_1:46634935-46634954 None:intergenic 25.0%
! TCATTGTGAGAAAAAATTAC+AGG - chr2_1:46635171-46635190 None:intergenic 25.0%
! TATTACATTATTGAGGTATG+TGG - chr2_1:46635236-46635255 None:intergenic 25.0%
! GCATAACTATTACATTATTG+AGG - chr2_1:46635243-46635262 None:intergenic 25.0%
! AACTAAAATATACAGCAACA+AGG - chr2_1:46635271-46635290 None:intergenic 25.0%
!!! AGAATATGTTTTAATGTCAG+CGG - chr2_1:46635325-46635344 None:intergenic 25.0%
! AGATATAATCATACTCTCAA+AGG - chr2_1:46635415-46635434 None:intergenic 25.0%
!! TTGAGAGTATGATTATATCT+CGG + chr2_1:46635415-46635434 Msa0209240:intron 25.0%
!!! TCTAGTATAATCCATTTTTC+CGG - chr2_1:46635746-46635765 None:intergenic 25.0%
! TTTCTGTTATCAAACAAACT+TGG - chr2_1:46635790-46635809 None:intergenic 25.0%
!!! TTATTTTATAGCCGGAAAAA+TGG + chr2_1:46635861-46635880 Msa0209240:intron 25.0%
!!! TCTAGTATAATCCATTTTTC+CGG - chr2_1:46635746-46635765 None:intergenic 25.0%
! TTTCTGTTATCAAACAAACT+TGG - chr2_1:46635790-46635809 None:intergenic 25.0%
! TCAATGAAGTAAAGTTTATC+TGG - chr2_1:46636127-46636146 None:intergenic 25.0%
! GATATTGTTCGTTCATATTT+GGG - chr2_1:46636354-46636373 None:intergenic 25.0%
! TGATATTGTTCGTTCATATT+TGG - chr2_1:46636355-46636374 None:intergenic 25.0%
!!! TTTTATTTGACTTTTGGGTA+TGG + chr2_1:46636619-46636638 Msa0209240:intron 25.0%
!!! TTTATTTGACTTTTGGGTAT+GGG + chr2_1:46636620-46636639 Msa0209240:intron 25.0%
! TGATACTTGGAAAATTTACT+TGG + chr2_1:46636719-46636738 Msa0209240:intron 25.0%
! TAAGACTTTACAATTCGAAT+CGG - chr2_1:46636780-46636799 None:intergenic 25.0%
!! AATCTTTTACGATTCAAATC+GGG - chr2_1:46636878-46636897 None:intergenic 25.0%
! TCATTTGGAAATTAAACAGA+AGG - chr2_1:46636989-46637008 None:intergenic 25.0%
!! AAGGTTTTCTTTCTTTGATT+CGG + chr2_1:46637065-46637084 Msa0209240:intron 25.0%
!!! CACACATATTTTTGAAAACT+CGG + chr2_1:46637133-46637152 Msa0209240:intron 25.0%
! TCTTAAAACTTTGTATGTTG+AGG + chr2_1:46637423-46637442 Msa0209240:CDS 25.0%
! CCAAGATAATCAAATTCTAT+TGG - chr2_1:46637604-46637623 None:intergenic 25.0%
! CCAATAGAATTTGATTATCT+TGG + chr2_1:46637601-46637620 Msa0209240:CDS 25.0%
! ACATTTAACTACATGAATCA+GGG - chr2_1:46637767-46637786 None:intergenic 25.0%
! AACATTTAACTACATGAATC+AGG - chr2_1:46637768-46637787 None:intergenic 25.0%
! TGGATTACAATACAACAATA+AGG - chr2_1:46637895-46637914 None:intergenic 25.0%
! GTATTGTAATCCAGAAAATT+AGG + chr2_1:46637902-46637921 Msa0209240:three_prime_UTR 25.0%
!!! TTCAGATGACATAATTTGTT+CGG + chr2_1:46638011-46638030 Msa0209240:three_prime_UTR 25.0%
AAAGGAGAATGGTGTTTATT+CGG - chr2_1:46627128-46627147 None:intergenic 30.0%
ATGTTTGTGAGAATGAGAAA+AGG - chr2_1:46627146-46627165 None:intergenic 30.0%
TGTATATAAAATTACCCGCA+CGG + chr2_1:46627488-46627507 Msa0209240:intron 30.0%
!!! TCTAACTGGTTTTTTTTCCT+CGG - chr2_1:46627543-46627562 None:intergenic 30.0%
!!! CATTTCCCTTTTTTTAAACC+GGG - chr2_1:46627600-46627619 None:intergenic 30.0%
! AAAGTTGAGAAAATTTCTGG+AGG + chr2_1:46627972-46627991 Msa0209240:CDS 30.0%
! AATTAAGCTGGCAATTTTTC+TGG - chr2_1:46628061-46628080 None:intergenic 30.0%
AATAACATCACAAAATACCC+AGG - chr2_1:46628100-46628119 None:intergenic 30.0%
TGAAGGTTTCAGTTAAACAA+GGG + chr2_1:46628217-46628236 Msa0209240:CDS 30.0%
! TTGCCTGTGGTAATATTTTT+CGG + chr2_1:46628426-46628445 Msa0209240:intron 30.0%
ATTCCGAAAAATATTACCAC+AGG - chr2_1:46628432-46628451 None:intergenic 30.0%
AATACAGATTCACTCAAAAG+GGG - chr2_1:46628510-46628529 None:intergenic 30.0%
CTAATACAGATTCACTCAAA+AGG - chr2_1:46628512-46628531 None:intergenic 30.0%
!! CTTTTGAGTGAATCTGTATT+AGG + chr2_1:46628510-46628529 Msa0209240:intron 30.0%
! TTCTGCTACTTCAAAAAGAA+GGG - chr2_1:46628811-46628830 None:intergenic 30.0%
! TTTCTGCTACTTCAAAAAGA+AGG - chr2_1:46628812-46628831 None:intergenic 30.0%
TTATTGTGCTTCTAAGTTAG+AGG + chr2_1:46628847-46628866 Msa0209240:intron 30.0%
GACCTTATTAAAGCATATTC+AGG - chr2_1:46628988-46629007 None:intergenic 30.0%
!! ACCATTTTTCATTTGATCAG+AGG + chr2_1:46629167-46629186 Msa0209240:intron 30.0%
TCCTCTGATCAAATGAAAAA+TGG - chr2_1:46629171-46629190 None:intergenic 30.0%
! GAGGAAAATATGAGTTCTAA+TGG + chr2_1:46629186-46629205 Msa0209240:intron 30.0%
! ATTTTCAGCTCAAATGACAA+AGG + chr2_1:46629454-46629473 Msa0209240:intron 30.0%
!!! TTTGTTAGATTGCGCTTTTT+TGG + chr2_1:46629487-46629506 Msa0209240:intron 30.0%
ATGCAGCATATCTATTATCT+AGG + chr2_1:46629605-46629624 Msa0209240:intron 30.0%
TGCAGCATATCTATTATCTA+GGG + chr2_1:46629606-46629625 Msa0209240:intron 30.0%
GATTTCAATTTATACCCAGT+TGG + chr2_1:46629703-46629722 Msa0209240:intron 30.0%
TGTTATGAGAAAAGACTACA+AGG - chr2_1:46629817-46629836 None:intergenic 30.0%
TAGCATAAACATGATCTACA+TGG - chr2_1:46629925-46629944 None:intergenic 30.0%
!! CTTTGGTATTTTATTTGCAG+TGG - chr2_1:46630053-46630072 None:intergenic 30.0%
TATAATGTTGTCATGCATTG+AGG + chr2_1:46630111-46630130 Msa0209240:intron 30.0%
AAACTGGAAATGCAAAATAC+AGG - chr2_1:46630223-46630242 None:intergenic 30.0%
!! AAATGGATTAGAAAATAGGG+TGG - chr2_1:46630280-46630299 None:intergenic 30.0%
! TAATTAGGTTGTCATTCTAC+AGG - chr2_1:46630434-46630453 None:intergenic 30.0%
GCATTCAGGAAACATTAATT+AGG - chr2_1:46630449-46630468 None:intergenic 30.0%
! GTGAAATTTTTGCAGTTGTT+TGG - chr2_1:46630521-46630540 None:intergenic 30.0%
CAGATATCATTCCATAATTG+GGG - chr2_1:46630571-46630590 None:intergenic 30.0%
CCAGATATCATTCCATAATT+GGG - chr2_1:46630572-46630591 None:intergenic 30.0%
TCCAGATATCATTCCATAAT+TGG - chr2_1:46630573-46630592 None:intergenic 30.0%
!!! ATCTGGAAGTTTTTTGAGAA+AGG + chr2_1:46630586-46630605 Msa0209240:CDS 30.0%
! TCTCTCAAATTTGAAATCAG+GGG - chr2_1:46630792-46630811 None:intergenic 30.0%
!! ATGATTTGTTATCCTATGTG+AGG + chr2_1:46630831-46630850 Msa0209240:intron 30.0%
AGATGAATTCTAAGCCAATT+AGG - chr2_1:46630875-46630894 None:intergenic 30.0%
! TAATGTCCCCATATTTTTCT+TGG + chr2_1:46630898-46630917 Msa0209240:intron 30.0%
TGACAAAAGAAAATTGCACA+AGG - chr2_1:46631010-46631029 None:intergenic 30.0%
ATTACAAAACCACCCTTAAA+CGG + chr2_1:46631341-46631360 Msa0209240:intron 30.0%
CCATTACTTTAAACCGTTTA+AGG - chr2_1:46631357-46631376 None:intergenic 30.0%
! CCTTAAACGGTTTAAAGTAA+TGG + chr2_1:46631354-46631373 Msa0209240:intron 30.0%
AAGTTTCTCATGAGTTGTTT+GGG - chr2_1:46631647-46631666 None:intergenic 30.0%
AAAGTTTCTCATGAGTTGTT+TGG - chr2_1:46631648-46631667 None:intergenic 30.0%
ATATATGATAGGAACCTGAA+AGG - chr2_1:46631838-46631857 None:intergenic 30.0%
TTACAAGACAGTTTCATTCA+AGG + chr2_1:46631957-46631976 Msa0209240:CDS 30.0%
ATAAGAAAAGAATAAGCACC+TGG - chr2_1:46632008-46632027 None:intergenic 30.0%
ATTCGAACTACATTAAGACT+GGG + chr2_1:46632194-46632213 Msa0209240:intron 30.0%
TTCTAACTAGTATGTCATAG+AGG + chr2_1:46632310-46632329 Msa0209240:intron 30.0%
! AAATTAAGGTGGTGTCAAAA+TGG + chr2_1:46632451-46632470 Msa0209240:intron 30.0%
! AATTAAGGTGGTGTCAAAAT+GGG + chr2_1:46632452-46632471 Msa0209240:intron 30.0%
AAATAGGTTAAGAGAGAGAT+TGG + chr2_1:46632570-46632589 Msa0209240:intron 30.0%
!! TGCTCTTTAGAATGAATTCA+AGG - chr2_1:46632928-46632947 None:intergenic 30.0%
!!! GGTTTTTTGATTGAGAGTTT+AGG + chr2_1:46633875-46633894 Msa0209240:intron 30.0%
!! TGAATTGATTTGAGCTTCTT+TGG + chr2_1:46633936-46633955 Msa0209240:intron 30.0%
!! TAGAATTTCTAGCTGGTAAT+CGG - chr2_1:46634058-46634077 None:intergenic 30.0%
!! TCAATATACAGAAAGTGTTG+GGG - chr2_1:46634267-46634286 None:intergenic 30.0%
ATTGAAATGTCCATTAAGCT+CGG + chr2_1:46634286-46634305 Msa0209240:intron 30.0%
TGACAACTATAAATAGATGG+TGG - chr2_1:46634528-46634547 None:intergenic 30.0%
AAATGTGAAAGTTTGATTGC+AGG + chr2_1:46634755-46634774 Msa0209240:intron 30.0%
! CATGACTCTTTCTTCTTTTT+GGG - chr2_1:46634842-46634861 None:intergenic 30.0%
! ACATGACTCTTTCTTCTTTT+TGG - chr2_1:46634843-46634862 None:intergenic 30.0%
GGTAGTTTATGAATAAGCTT+TGG + chr2_1:46635021-46635040 Msa0209240:intron 30.0%
!! CTTTAAAATGGATGAAGTAG+TGG + chr2_1:46635050-46635069 Msa0209240:intron 30.0%
TAAAATATACAGCAACAAGG+TGG - chr2_1:46635268-46635287 None:intergenic 30.0%
GTGAGCAAGTTAAAATGTAA+TGG + chr2_1:46635575-46635594 Msa0209240:intron 30.0%
TAACTCGTCAACATTGAAAA+TGG - chr2_1:46635715-46635734 None:intergenic 30.0%
TTAACTTATAGCCGGAAAAA+TGG + chr2_1:46635732-46635751 Msa0209240:intron 30.0%
TAACTCGTCAACATTGAAAA+TGG - chr2_1:46635715-46635734 None:intergenic 30.0%
!! TTGACGAGTTATTTTATAGC+CGG + chr2_1:46635853-46635872 Msa0209240:intron 30.0%
GCAAGCATAAATAACTTACA+AGG - chr2_1:46636233-46636252 None:intergenic 30.0%
ACGAACAATATCATTTCTTC+AGG + chr2_1:46636362-46636381 Msa0209240:CDS 30.0%
AGGTAATAATCACAGTGAAA+GGG + chr2_1:46636413-46636432 Msa0209240:intron 30.0%
! ACTATATGGATCTCGTTTTA+CGG - chr2_1:46636490-46636509 None:intergenic 30.0%
TCCATATAGTCTATCAACTA+TGG + chr2_1:46636500-46636519 Msa0209240:intron 30.0%
AAGACTTTACAATTCGAATC+GGG - chr2_1:46636779-46636798 None:intergenic 30.0%
! ATCTTGCGATTTAGTGATTT+TGG + chr2_1:46636947-46636966 Msa0209240:intron 30.0%
CAAAGAAATATCAATAGCCA+TGG - chr2_1:46637557-46637576 None:intergenic 30.0%
TCTACTCATTCCTTTCTAAA+AGG - chr2_1:46637696-46637715 None:intergenic 30.0%
AGATAGTTTCTACTTCATCA+AGG + chr2_1:46637715-46637734 Msa0209240:three_prime_UTR 30.0%
! GATTTGAAAGCCTAATTTTC+TGG - chr2_1:46637915-46637934 None:intergenic 30.0%
CATTCTTTCTAGATGTATTG+TGG + chr2_1:46637942-46637961 Msa0209240:three_prime_UTR 30.0%
! AGGACTAGTGATCATTTCAT+TGG + chr2_1:46627063-46627082 Msa0209240:five_prime_UTR 35.0%
CCTATTCTGTCTTTCGAATT+GGG - chr2_1:46627100-46627119 None:intergenic 35.0%
TCCTATTCTGTCTTTCGAAT+TGG - chr2_1:46627101-46627120 None:intergenic 35.0%
TGAGAATGAGAAAAGGAGAA+TGG - chr2_1:46627139-46627158 None:intergenic 35.0%
GTGCAGGAAGAAAAGAAAAA+GGG - chr2_1:46627442-46627461 None:intergenic 35.0%
AGTGCAGGAAGAAAAGAAAA+AGG - chr2_1:46627443-46627462 None:intergenic 35.0%
! AAATTTGCAAAAGGAAGTGC+AGG - chr2_1:46627458-46627477 None:intergenic 35.0%
! TGAATGCAGTAATTTGTGCA+AGG + chr2_1:46627908-46627927 Msa0209240:intron 35.0%
! ATCAACTAGTTTGAGGTCAT+TGG - chr2_1:46628167-46628186 None:intergenic 35.0%
CTGAAGGTTTCAGTTAAACA+AGG + chr2_1:46628216-46628235 Msa0209240:CDS 35.0%
GAAGGTTTCAGTTAAACAAG+GGG + chr2_1:46628218-46628237 Msa0209240:CDS 35.0%
AAAGCGATCAATGATATGCT+CGG - chr2_1:46628289-46628308 None:intergenic 35.0%
AAAAGGGGGCAAAAAATATG+GGG - chr2_1:46628495-46628514 None:intergenic 35.0%
CAAAAGGGGGCAAAAAATAT+GGG - chr2_1:46628496-46628515 None:intergenic 35.0%
TCAAAAGGGGGCAAAAAATA+TGG - chr2_1:46628497-46628516 None:intergenic 35.0%
ATACAGATTCACTCAAAAGG+GGG - chr2_1:46628509-46628528 None:intergenic 35.0%
!! TTTTATTGATGGCCCTATTG+AGG + chr2_1:46628553-46628572 Msa0209240:intron 35.0%
! TTTATTGATGGCCCTATTGA+GGG + chr2_1:46628554-46628573 Msa0209240:intron 35.0%
TTTAGGCCTCCTTCATATAT+GGG + chr2_1:46628727-46628746 Msa0209240:intron 35.0%
! TCTGCTACTTCAAAAAGAAG+GGG - chr2_1:46628810-46628829 None:intergenic 35.0%
TCTTGAACTAAGTCTTGCAA+TGG + chr2_1:46629224-46629243 Msa0209240:intron 35.0%
CTTGAACTAAGTCTTGCAAT+GGG + chr2_1:46629225-46629244 Msa0209240:intron 35.0%
TTGCTTGTGAAATGGTGTTT+AGG + chr2_1:46629307-46629326 Msa0209240:intron 35.0%
! TGGCTTGGAATATTTGGAAA+TGG + chr2_1:46629368-46629387 Msa0209240:CDS 35.0%
CCATACGTACAATGCAATAT+TGG - chr2_1:46629568-46629587 None:intergenic 35.0%
CCAATATTGCATTGTACGTA+TGG + chr2_1:46629565-46629584 Msa0209240:intron 35.0%
!!! TCGATTCAGAAGGGTATTTT+CGG - chr2_1:46629685-46629704 None:intergenic 35.0%
TGAGAAAAGACTACAAGGTT+GGG - chr2_1:46629812-46629831 None:intergenic 35.0%
ATGAGAAAAGACTACAAGGT+TGG - chr2_1:46629813-46629832 None:intergenic 35.0%
!! AAAATTGGTTTGAGGAGTAG+TGG + chr2_1:46629953-46629972 Msa0209240:intron 35.0%
!! AAATTGGTTTGAGGAGTAGT+GGG + chr2_1:46629954-46629973 Msa0209240:intron 35.0%
! ACAGATGAATTGAAGAGCAT+TGG + chr2_1:46630020-46630039 Msa0209240:intron 35.0%
TTTCAACGAACCACTTTCTT+TGG - chr2_1:46630070-46630089 None:intergenic 35.0%
GAAAGTGGTTCGTTGAAATT+TGG + chr2_1:46630072-46630091 Msa0209240:intron 35.0%
GTTGAAATTTGGAAGAGACT+CGG + chr2_1:46630083-46630102 Msa0209240:intron 35.0%
! TGAGTAGGATGGAATAGTTT+TGG + chr2_1:46630155-46630174 Msa0209240:intron 35.0%
CAAGATAAACGGAATTATGC+AGG - chr2_1:46630197-46630216 None:intergenic 35.0%
! TTGCATTTCCAGTTTTACAG+AGG + chr2_1:46630228-46630247 Msa0209240:intron 35.0%
! TGCATTTCCAGTTTTACAGA+GGG + chr2_1:46630229-46630248 Msa0209240:intron 35.0%
! TTGCAGTTGTTTGGCTATTT+TGG - chr2_1:46630512-46630531 None:intergenic 35.0%
CCCAATTATGGAATGATATC+TGG + chr2_1:46630569-46630588 Msa0209240:CDS 35.0%
AAAATTGAGGCAAAGCTGAA+GGG - chr2_1:46630762-46630781 None:intergenic 35.0%
TAAAATTGAGGCAAAGCTGA+AGG - chr2_1:46630763-46630782 None:intergenic 35.0%
GACCTTCCAAGAAAAATATG+GGG - chr2_1:46630907-46630926 None:intergenic 35.0%
GGACCTTCCAAGAAAAATAT+GGG - chr2_1:46630908-46630927 None:intergenic 35.0%
AGGACCTTCCAAGAAAAATA+TGG - chr2_1:46630909-46630928 None:intergenic 35.0%
GAGCAAGAATAACAAATGCA+AGG - chr2_1:46630929-46630948 None:intergenic 35.0%
ATACTGATCAAGTACTTTGC+AGG - chr2_1:46630958-46630977 None:intergenic 35.0%
AATGATCTCTGTTGTCAAAG+CGG + chr2_1:46631139-46631158 Msa0209240:intron 35.0%
TACTTTAAACCGTTTAAGGG+TGG - chr2_1:46631353-46631372 None:intergenic 35.0%
ATTTCCTCTGTTGTCAATAG+CGG - chr2_1:46631561-46631580 None:intergenic 35.0%
TCAATGGGGTTATAAAAGAC+AGG - chr2_1:46631696-46631715 None:intergenic 35.0%
! CATTGATAGTCATGTCAATG+GGG - chr2_1:46631710-46631729 None:intergenic 35.0%
! GCATTGATAGTCATGTCAAT+GGG - chr2_1:46631711-46631730 None:intergenic 35.0%
CACTAATTGTCATGTGAATG+GGG - chr2_1:46631768-46631787 None:intergenic 35.0%
GCACTAATTGTCATGTGAAT+GGG - chr2_1:46631769-46631788 None:intergenic 35.0%
TGATGAAATTTATGAGCTCC+AGG + chr2_1:46631987-46632006 Msa0209240:CDS 35.0%
!! AGTTTTCACACTTGGTGAAT+AGG - chr2_1:46632109-46632128 None:intergenic 35.0%
CATTCGAACTACATTAAGAC+TGG + chr2_1:46632193-46632212 Msa0209240:intron 35.0%
TTCGAACTACATTAAGACTG+GGG + chr2_1:46632195-46632214 Msa0209240:intron 35.0%
! CTTGGTAATTCCATTCATCA+GGG - chr2_1:46632236-46632255 None:intergenic 35.0%
! ACTTGGTAATTCCATTCATC+AGG - chr2_1:46632237-46632256 None:intergenic 35.0%
CTATCCTTGTCTTCATTCTA+AGG - chr2_1:46632263-46632282 None:intergenic 35.0%
GCGTAAATCTTTCTTTGTAC+AGG - chr2_1:46632341-46632360 None:intergenic 35.0%
! GATGGCATTGAATGTTGTAA+TGG + chr2_1:46632598-46632617 Msa0209240:intron 35.0%
AACAAAATTAAGGTGGTGTC+CGG - chr2_1:46632733-46632752 None:intergenic 35.0%
GTGCAAATCTTTCTTTGTAC+AGG + chr2_1:46632841-46632860 Msa0209240:intron 35.0%
!! GCTAAAAAATGGTGTCATGA+GGG - chr2_1:46633199-46633218 None:intergenic 35.0%
!! TGCTAAAAAATGGTGTCATG+AGG - chr2_1:46633200-46633219 None:intergenic 35.0%
ACTTTGTGATGTCTATGTGT+TGG - chr2_1:46633316-46633335 None:intergenic 35.0%
AAATAGGCTACAAATAGTCG+TGG - chr2_1:46633367-46633386 None:intergenic 35.0%
TTTGAGCTTCTTTGGCATAA+TGG + chr2_1:46633944-46633963 Msa0209240:intron 35.0%
!! ATCAGTCTAGAATTTCTAGC+TGG - chr2_1:46634065-46634084 None:intergenic 35.0%
TTGAAATGTCCATTAAGCTC+GGG + chr2_1:46634287-46634306 Msa0209240:intron 35.0%
ATGTAAATTCCCGAGCTTAA+TGG - chr2_1:46634299-46634318 None:intergenic 35.0%
TTCCTAGGCAATCAATCAAT+AGG + chr2_1:46634342-46634361 Msa0209240:intron 35.0%
TCAATCTGAACTTTCTTTCC+CGG - chr2_1:46634397-46634416 None:intergenic 35.0%
TTTCTGTGCATGTAGACATA+AGG - chr2_1:46634644-46634663 None:intergenic 35.0%
AAGACGAAACTGGAAAAGAA+GGG - chr2_1:46634995-46635014 None:intergenic 35.0%
AAAGACGAAACTGGAAAAGA+AGG - chr2_1:46634996-46635015 None:intergenic 35.0%
CAATAACATCAACACAGTCT+AGG - chr2_1:46635494-46635513 None:intergenic 35.0%
GAGTACAAAAGTCACCTTAA+AGG + chr2_1:46635661-46635680 Msa0209240:intron 35.0%
ACAAAAGTCACCTTAAAGGT+AGG + chr2_1:46635665-46635684 Msa0209240:intron 35.0%
CAAAAGTCACCTTAAAGGTA+GGG + chr2_1:46635666-46635685 Msa0209240:intron 35.0%
TTGACGAGTTAACTTATAGC+CGG + chr2_1:46635724-46635743 Msa0209240:intron 35.0%
!! ACAAACACACTTCTGGAATA+TGG + chr2_1:46635987-46636006 Msa0209240:intron 35.0%
!! CAAACACACTTCTGGAATAT+GGG + chr2_1:46635988-46636007 Msa0209240:intron 35.0%
!! AAACACACTTCTGGAATATG+GGG + chr2_1:46635989-46636008 Msa0209240:intron 35.0%
TATGCATCATACAACTACAG+AGG + chr2_1:46636154-46636173 Msa0209240:CDS 35.0%
AATCACTTTGCAGAATATGC+TGG + chr2_1:46636190-46636209 Msa0209240:CDS 35.0%
!! CTTGCTTTTCTTGCTTTACT+CGG + chr2_1:46636248-46636267 Msa0209240:intron 35.0%
ACTGTGATTATTACCTCTTG+AGG - chr2_1:46636409-46636428 None:intergenic 35.0%
GAGGTAATAATCACAGTGAA+AGG + chr2_1:46636412-46636431 Msa0209240:intron 35.0%
! TTTACGGATGCTTGATAATC+TGG - chr2_1:46636474-46636493 None:intergenic 35.0%
!! GCCATAGTTGATAGACTATA+TGG - chr2_1:46636504-46636523 None:intergenic 35.0%
GACAGAAAAGATGATGATCA+TGG - chr2_1:46636526-46636545 None:intergenic 35.0%
TACAAATGCTAACACTGAAG+TGG - chr2_1:46636591-46636610 None:intergenic 35.0%
! ATTTGAGATTAATCCCTGAC+AGG - chr2_1:46636699-46636718 None:intergenic 35.0%
TGGAAAATTTACTTGGCTAG+TGG + chr2_1:46636726-46636745 Msa0209240:intron 35.0%
AAAATTTACTTGGCTAGTGG+TGG + chr2_1:46636729-46636748 Msa0209240:intron 35.0%
TTTACAATTCGAATCGGGAT+TGG - chr2_1:46636774-46636793 None:intergenic 35.0%
CCACCCTATTCTACAAAAAT+AGG - chr2_1:46636852-46636871 None:intergenic 35.0%
!!! CCTATTTTTGTAGAATAGGG+TGG + chr2_1:46636849-46636868 Msa0209240:intron 35.0%
TGTGTACTCTTAATCGATGA+AGG - chr2_1:46636922-46636941 None:intergenic 35.0%
! CATGAGAGTTTGAAGTCATT+TGG - chr2_1:46637004-46637023 None:intergenic 35.0%
ATAATTTACATGCCCTCAAG+TGG - chr2_1:46637308-46637327 None:intergenic 35.0%
CAGACACCTGTATTATGAAT+TGG - chr2_1:46637396-46637415 None:intergenic 35.0%
TGAGGTAAATACATATGCAC+TGG + chr2_1:46637441-46637460 Msa0209240:CDS 35.0%
! TTTTGTACTCGTTGTATCGA+AGG - chr2_1:46637636-46637655 None:intergenic 35.0%
TTCGATACAACGAGTACAAA+AGG + chr2_1:46637635-46637654 Msa0209240:CDS 35.0%
GAAAGAAAAGCTTGTATCGA+TGG + chr2_1:46637660-46637679 Msa0209240:CDS 35.0%
! CTCATTCCTTTCTAAAAGGT+AGG - chr2_1:46637692-46637711 None:intergenic 35.0%
ACTACGATCAAGGCAAATTT+AGG + chr2_1:46637845-46637864 Msa0209240:three_prime_UTR 35.0%
ATTCTGTCTTTCGAATTGGG+CGG - chr2_1:46627097-46627116 None:intergenic 40.0%
CCCAATTCGAAAGACAGAAT+AGG + chr2_1:46627097-46627116 Msa0209240:five_prime_UTR 40.0%
AATCGATGAGAAAGGTTCAG+AGG - chr2_1:46627242-46627261 None:intergenic 40.0%
TGGGTGGAAAAGTTAAGATC+TGG + chr2_1:46627282-46627301 Msa0209240:CDS 40.0%
! AGCTTGTTCTGCGATTTCAA+CGG - chr2_1:46627312-46627331 None:intergenic 40.0%
TTGAAATCGCAGAACAAGCT+CGG + chr2_1:46627312-46627331 Msa0209240:CDS 40.0%
AAGGGAAAGAGAAGGATCAA+TGG - chr2_1:46627375-46627394 None:intergenic 40.0%
ATTTGAGGAAGGGAAAGAGA+AGG - chr2_1:46627383-46627402 None:intergenic 40.0%
TGATAACATGACTTTCTCCG+AGG + chr2_1:46627523-46627542 Msa0209240:intron 40.0%
!!! CCTTTTTTTAAACCGGGACT+GGG - chr2_1:46627594-46627613 None:intergenic 40.0%
CCAGTCCCGGTTTAAAAAAA+GGG + chr2_1:46627592-46627611 Msa0209240:intron 40.0%
! TTTAAGGTCTAACCAATGCC+CGG - chr2_1:46627635-46627654 None:intergenic 40.0%
! CTTGAGAATTAGTCTCGTAG+CGG + chr2_1:46627679-46627698 Msa0209240:intron 40.0%
TTCAAGACCTGGTCAAGTTT+AGG + chr2_1:46627936-46627955 Msa0209240:CDS 40.0%
AGAATCACCTAAACTTGACC+AGG - chr2_1:46627946-46627965 None:intergenic 40.0%
!! TCAATGATATGCTCGGTGTT+GGG - chr2_1:46628282-46628301 None:intergenic 40.0%
!! ATCAATGATATGCTCGGTGT+TGG - chr2_1:46628283-46628302 None:intergenic 40.0%
!!! GATTTTGTTTCTGTTGCCTG+TGG + chr2_1:46628413-46628432 Msa0209240:intron 40.0%
AAACAACAAAAGTGGGGCTA+GGG - chr2_1:46628536-46628555 None:intergenic 40.0%
AAAACAACAAAAGTGGGGCT+AGG - chr2_1:46628537-46628556 None:intergenic 40.0%
ATATGAAGGAGGCCTAAAGT+TGG - chr2_1:46628725-46628744 None:intergenic 40.0%
CTTTAGGCCTCCTTCATATA+TGG + chr2_1:46628726-46628745 Msa0209240:intron 40.0%
TTAGGCCTCCTTCATATATG+GGG + chr2_1:46628728-46628747 Msa0209240:intron 40.0%
ATTGTAGGCCCCATATATGA+AGG - chr2_1:46628739-46628758 None:intergenic 40.0%
! ATATGGGGCCTACAATTTTG+CGG + chr2_1:46628743-46628762 Msa0209240:intron 40.0%
TCCATAAGCCGCAAAATTGT+AGG - chr2_1:46628754-46628773 None:intergenic 40.0%
! TTTTGCGGCTTATGGAAAAG+AGG + chr2_1:46628758-46628777 Msa0209240:intron 40.0%
TTTGCGGCTTATGGAAAAGA+GGG + chr2_1:46628759-46628778 Msa0209240:intron 40.0%
! CTGCTACTTCAAAAAGAAGG+GGG - chr2_1:46628809-46628828 None:intergenic 40.0%
TGCAGCAGTGATGTATTTGA+TGG - chr2_1:46629333-46629352 None:intergenic 40.0%
ATCAAATACATCACTGCTGC+AGG + chr2_1:46629332-46629351 Msa0209240:CDS 40.0%
! GCTAAGTGGCTTGGAATATT+TGG + chr2_1:46629362-46629381 Msa0209240:CDS 40.0%
!! GCGTTCTAAAGTTAAGATCC+AGG - chr2_1:46629731-46629750 None:intergenic 40.0%
AGGAATTTACCTCAGGACTA+TGG - chr2_1:46629753-46629772 None:intergenic 40.0%
TCCTGAGGTAAATTCCTTAC+TGG + chr2_1:46629756-46629775 Msa0209240:intron 40.0%
TCCAGTAAGGAATTTACCTC+AGG - chr2_1:46629760-46629779 None:intergenic 40.0%
GAGAAAAGACTACAAGGTTG+GGG - chr2_1:46629811-46629830 None:intergenic 40.0%
AAATTTGGAAGAGACTCGGA+AGG + chr2_1:46630087-46630106 Msa0209240:intron 40.0%
TGTGTGTGAGAACTTGGAAA+TGG - chr2_1:46630297-46630316 None:intergenic 40.0%
AGATATGCGAGAACCAAAAC+TGG + chr2_1:46630483-46630502 Msa0209240:intron 40.0%
!!! GCTATTTTGGCAACCAGTTT+TGG - chr2_1:46630499-46630518 None:intergenic 40.0%
ACTGCAAAAATTTCACGGTG+TGG + chr2_1:46630525-46630544 Msa0209240:CDS 40.0%
! GATTTGTGTCGATGAGTTGT+AGG + chr2_1:46630700-46630719 Msa0209240:intron 40.0%
GGATTTCAGCTATGTTTCGT+AGG + chr2_1:46630721-46630740 Msa0209240:intron 40.0%
ATCCTATGTGAGGATTCTCT+TGG + chr2_1:46630841-46630860 Msa0209240:intron 40.0%
TCCTATGTGAGGATTCTCTT+GGG + chr2_1:46630842-46630861 Msa0209240:intron 40.0%
! GTCCCCATATTTTTCTTGGA+AGG + chr2_1:46630902-46630921 Msa0209240:intron 40.0%
TCAAGTACTTTGCAGGACTA+GGG - chr2_1:46630951-46630970 None:intergenic 40.0%
ATCAAGTACTTTGCAGGACT+AGG - chr2_1:46630952-46630971 None:intergenic 40.0%
!! CGATGGTGGAAAAACTGAAA+AGG + chr2_1:46631115-46631134 Msa0209240:intron 40.0%
TAAAAGACAGGAAAGCCTAG+AGG - chr2_1:46631684-46631703 None:intergenic 40.0%
!! GGCATTGATAGTCATGTCAA+TGG - chr2_1:46631712-46631731 None:intergenic 40.0%
ATCTAAATCATCCATCCACG+TGG - chr2_1:46631733-46631752 None:intergenic 40.0%
TGTGAATGGGGAGAAGAAAA+GGG - chr2_1:46631756-46631775 None:intergenic 40.0%
ATGTGAATGGGGAGAAGAAA+AGG - chr2_1:46631757-46631776 None:intergenic 40.0%
GGCACTAATTGTCATGTGAA+TGG - chr2_1:46631770-46631789 None:intergenic 40.0%
! TGAAAGGTCAAAGTGGATTC+AGG - chr2_1:46631822-46631841 None:intergenic 40.0%
TGAATCCACTTTGACCTTTC+AGG + chr2_1:46631821-46631840 Msa0209240:intron 40.0%
!! GCAGCATCTGTTCTAGAATT+TGG + chr2_1:46631913-46631932 Msa0209240:intron 40.0%
! TCACACTTGGTGAATAGGAT+TGG - chr2_1:46632104-46632123 None:intergenic 40.0%
GTAGAAAGTTCCCTGATGAA+TGG + chr2_1:46632223-46632242 Msa0209240:intron 40.0%
!! TCTTCATTCTAAGGAGCACT+TGG - chr2_1:46632254-46632273 None:intergenic 40.0%
TGCTCCTTAGAATGAAGACA+AGG + chr2_1:46632256-46632275 Msa0209240:intron 40.0%
CCTATTTGCACTATGACTGT+AGG - chr2_1:46632557-46632576 None:intergenic 40.0%
CCTACAGTCATAGTGCAAAT+AGG + chr2_1:46632554-46632573 Msa0209240:intron 40.0%
AGACATGCACACAATTGAGA+AGG + chr2_1:46632655-46632674 Msa0209240:intron 40.0%
ACAAAGTCATGAACCCTTAC+AGG + chr2_1:46633528-46633547 Msa0209240:intron 40.0%
ATCAATGTTGTTGAAAGGGG+TGG + chr2_1:46633785-46633804 Msa0209240:intron 40.0%
AAACTACTTGTCGCTGACAT+AGG - chr2_1:46633835-46633854 None:intergenic 40.0%
TATGTCAGCGACAAGTAGTT+TGG + chr2_1:46633834-46633853 Msa0209240:intron 40.0%
!!! GCATAATGGTTTTGACAACG+TGG + chr2_1:46633958-46633977 Msa0209240:intron 40.0%
CATCCACATTACTTGTAGGA+AGG - chr2_1:46634004-46634023 None:intergenic 40.0%
GACTCATCCACATTACTTGT+AGG - chr2_1:46634008-46634027 None:intergenic 40.0%
!!! AGTCGAGTTTTGTTCCTACT+AGG + chr2_1:46634024-46634043 Msa0209240:intron 40.0%
!! GTTTTGTTCCTACTAGGTTG+TGG + chr2_1:46634030-46634049 Msa0209240:intron 40.0%
AACATAAAACTTGTGACCGC+TGG + chr2_1:46634132-46634151 Msa0209240:intron 40.0%
! GTCCTATTGATTGATTGCCT+AGG - chr2_1:46634347-46634366 None:intergenic 40.0%
CTCAAGTTAATGGGATGAAC+CGG + chr2_1:46634375-46634394 Msa0209240:intron 40.0%
TCAAGTTAATGGGATGAACC+GGG + chr2_1:46634376-46634395 Msa0209240:intron 40.0%
TCCTTTGAATTCCTACCTCA+AGG + chr2_1:46634485-46634504 Msa0209240:intron 40.0%
ACCTTGAGGTAGGAATTCAA+AGG - chr2_1:46634489-46634508 None:intergenic 40.0%
AATACTCACAACCTTGAGGT+AGG - chr2_1:46634499-46634518 None:intergenic 40.0%
AAAGGTTTCTGTGTCAACAC+TGG + chr2_1:46634675-46634694 Msa0209240:intron 40.0%
ATTTATCATGCCCAAGTGTC+AGG + chr2_1:46634947-46634966 Msa0209240:intron 40.0%
AGACGAAACTGGAAAAGAAG+GGG - chr2_1:46634994-46635013 None:intergenic 40.0%
TTCCAGTTTCGTCTTTGTGA+TGG + chr2_1:46635000-46635019 Msa0209240:intron 40.0%
TACCATCACAAAGACGAAAC+TGG - chr2_1:46635005-46635024 None:intergenic 40.0%
!! TCTCACAATGACTTGCTTTC+TGG + chr2_1:46635180-46635199 Msa0209240:CDS 40.0%
TCTAGGAAGAAGAATGGCAA+AGG - chr2_1:46635477-46635496 None:intergenic 40.0%
ACACAGTCTAGGAAGAAGAA+TGG - chr2_1:46635483-46635502 None:intergenic 40.0%
ACTAAATGAGTCAGCACATG+CGG + chr2_1:46635531-46635550 Msa0209240:intron 40.0%
TAAGGAGACAAACACACTTC+TGG + chr2_1:46635980-46635999 Msa0209240:intron 40.0%
ATTCTCATGTCCAGAGAGAA+TGG + chr2_1:46636037-46636056 Msa0209240:intron 40.0%
GGTTATCAAACCATTCTCTC+TGG - chr2_1:46636050-46636069 None:intergenic 40.0%
AACTACAGAGGCTATGACAT+AGG + chr2_1:46636166-46636185 Msa0209240:CDS 40.0%
ACTACAGAGGCTATGACATA+GGG + chr2_1:46636167-46636186 Msa0209240:CDS 40.0%
TCTGTCACGCGTGTTTATTT+AGG + chr2_1:46636540-46636559 Msa0209240:intron 40.0%
!! ATTTGACTTTTGGGTATGGG+AGG + chr2_1:46636623-46636642 Msa0209240:intron 40.0%
!! TTTGACTTTTGGGTATGGGA+GGG + chr2_1:46636624-46636643 Msa0209240:intron 40.0%
ACAAAATTCACTGACCTGTC+AGG + chr2_1:46636682-46636701 Msa0209240:intron 40.0%
CAAAATTCACTGACCTGTCA+GGG + chr2_1:46636683-46636702 Msa0209240:intron 40.0%
TGTGTGCTCTTAATCGTTGA+GGG - chr2_1:46636823-46636842 None:intergenic 40.0%
TTGTGTGCTCTTAATCGTTG+AGG - chr2_1:46636824-46636843 None:intergenic 40.0%
AAAATATGTGTGCGTGTCTG+CGG - chr2_1:46637125-46637144 None:intergenic 40.0%
!! AGCTTTGCTCTGGCTTTAAA+CGG - chr2_1:46637219-46637238 None:intergenic 40.0%
!! CGCTATCCTACCTTTTAGAA+AGG + chr2_1:46637683-46637702 Msa0209240:CDS 40.0%
GCTTGTTCTGCGATTTCAAC+GGG - chr2_1:46627311-46627330 None:intergenic 45.0%
GGATCAATGGAGAGAAGAGA+AGG - chr2_1:46627362-46627381 None:intergenic 45.0%
!! GAGAGGTGTCATTTGAGGAA+GGG - chr2_1:46627393-46627412 None:intergenic 45.0%
!! ATGACGAGAGGTGTCATTTG+AGG - chr2_1:46627398-46627417 None:intergenic 45.0%
AGAGTTACTGACATGACGAG+AGG - chr2_1:46627410-46627429 None:intergenic 45.0%
TAAAATTACCCGCACGGTGT+TGG + chr2_1:46627494-46627513 Msa0209240:intron 45.0%
AAAATTACCCGCACGGTGTT+GGG + chr2_1:46627495-46627514 Msa0209240:intron 45.0%
GATTCCTCGAGTCGTCAATT+TGG + chr2_1:46627561-46627580 Msa0209240:intron 45.0%
CCCAGTCCCGGTTTAAAAAA+AGG + chr2_1:46627591-46627610 Msa0209240:intron 45.0%
!!! CCCTTTTTTTAAACCGGGAC+TGG - chr2_1:46627595-46627614 None:intergenic 45.0%
TTAAGGTCTAACCAATGCCC+GGG - chr2_1:46627634-46627653 None:intergenic 45.0%
AATCCTAGCTTAGGCCACTT+GGG - chr2_1:46627706-46627725 None:intergenic 45.0%
AAATCCTAGCTTAGGCCACT+TGG - chr2_1:46627707-46627726 None:intergenic 45.0%
GACACCAGAAATCCTAGCTT+AGG - chr2_1:46627715-46627734 None:intergenic 45.0%
!! CAATGATATGCTCGGTGTTG+GGG - chr2_1:46628281-46628300 None:intergenic 45.0%
TGATCGCTTTCGAGAATTGC+AGG + chr2_1:46628299-46628318 Msa0209240:CDS 45.0%
CCAAGAGTTGTCCCTCAATA+GGG - chr2_1:46628568-46628587 None:intergenic 45.0%
! GCCTACAATTTTGCGGCTTA+TGG + chr2_1:46628750-46628769 Msa0209240:intron 45.0%
AAGGGGGCCTAAAATACTCA+AGG - chr2_1:46628793-46628812 None:intergenic 45.0%
TACATCACTGCTGCAGGATT+TGG + chr2_1:46629338-46629357 Msa0209240:CDS 45.0%
! GCAGTTTACCACAGCTCTAA+AGG - chr2_1:46629648-46629667 None:intergenic 45.0%
! ATTTATACCCAGTTGGTGCC+TGG + chr2_1:46629710-46629729 Msa0209240:intron 45.0%
TTAAGATCCAGGCACCAACT+GGG - chr2_1:46629720-46629739 None:intergenic 45.0%
! TTTAGAACGCCATAGTCCTG+AGG + chr2_1:46629741-46629760 Msa0209240:intron 45.0%
CGATGCAAGTTCATCCAGTA+AGG - chr2_1:46629773-46629792 None:intergenic 45.0%
!! TAGTGGGTTGGATAGAAGTG+CGG + chr2_1:46629970-46629989 Msa0209240:intron 45.0%
TGTTGTCATGCATTGAGGAG+AGG + chr2_1:46630116-46630135 Msa0209240:intron 45.0%
GTTGTCATGCATTGAGGAGA+GGG + chr2_1:46630117-46630136 Msa0209240:intron 45.0%
AAGGAAGGCAAGGATTGAGT+AGG + chr2_1:46630140-46630159 Msa0209240:intron 45.0%
AAGGCAAGGATTGAGTAGGA+TGG + chr2_1:46630144-46630163 Msa0209240:intron 45.0%
AAAGCTGCCCTCTGTAAAAC+TGG - chr2_1:46630239-46630258 None:intergenic 45.0%
TGTGTGTGTGTGTGAGAACT+TGG - chr2_1:46630303-46630322 None:intergenic 45.0%
! TCCTGAATGCTTTTCCCCAA+TGG + chr2_1:46630459-46630478 Msa0209240:intron 45.0%
TTCTCGCATATCTGCCATTG+GGG - chr2_1:46630476-46630495 None:intergenic 45.0%
GTTCTCGCATATCTGCCATT+GGG - chr2_1:46630477-46630496 None:intergenic 45.0%
TTTCACGGTGTGGAAATTCC+AGG + chr2_1:46630535-46630554 Msa0209240:CDS 45.0%
TGTGGAAATTCCAGGCTCTA+AGG + chr2_1:46630543-46630562 Msa0209240:CDS 45.0%
!! GCTCTAAGGAACCCCAATTA+TGG + chr2_1:46630557-46630576 Msa0209240:CDS 45.0%
!! CAGGGGAAGTGCTAAAATTG+AGG - chr2_1:46630775-46630794 None:intergenic 45.0%
ACCCAAGAGAATCCTCACAT+AGG - chr2_1:46630846-46630865 None:intergenic 45.0%
TATGTGAGGATTCTCTTGGG+TGG + chr2_1:46630845-46630864 Msa0209240:intron 45.0%
TGAGCTTAAGAGCTCTACGA+TGG + chr2_1:46631098-46631117 Msa0209240:intron 45.0%
CTGTTGTCAAAGCGGAAATG+CGG + chr2_1:46631147-46631166 Msa0209240:intron 45.0%
AGCCACCTCAAAAATTGGTG+CGG + chr2_1:46631178-46631197 Msa0209240:intron 45.0%
CGTATTCAATGCTGCCAAAG+CGG - chr2_1:46631420-46631439 None:intergenic 45.0%
AGCGTGTCGTATGTGAATAG+TGG - chr2_1:46631474-46631493 None:intergenic 45.0%
TCTAGGAGCTTATCTCTGGT+AGG - chr2_1:46631607-46631626 None:intergenic 45.0%
AGAGAAGTTCTCTCTGGTCT+AGG - chr2_1:46631624-46631643 None:intergenic 45.0%
TTTGGGAGAGAAGTTCTCTC+TGG - chr2_1:46631630-46631649 None:intergenic 45.0%
TTCTGAATGCCTCATCCTCT+AGG + chr2_1:46631666-46631685 Msa0209240:intron 45.0%
ACATGACTATCAATGCCACG+TGG + chr2_1:46631715-46631734 Msa0209240:intron 45.0%
! GGTCAAAGTGGATTCAGGAA+TGG - chr2_1:46631817-46631836 None:intergenic 45.0%
AGGAACCTGAAAGGTCAAAG+TGG - chr2_1:46631829-46631848 None:intergenic 45.0%
CTACATTAAGACTGGGGCTA+AGG + chr2_1:46632201-46632220 Msa0209240:intron 45.0%
! ACAAGTAGTTTGGTGGAGGA+AGG + chr2_1:46633844-46633863 Msa0209240:intron 45.0%
! TTTGGTGGAGGAAGGTTTTG+TGG + chr2_1:46633852-46633871 Msa0209240:intron 45.0%
!! TTGGTGGAGGAAGGTTTTGT+GGG + chr2_1:46633853-46633872 Msa0209240:intron 45.0%
GAGCCTTCCTACAAGTAATG+TGG + chr2_1:46633998-46634017 Msa0209240:intron 45.0%
AATCGGAACCACAACCTAGT+AGG - chr2_1:46634041-46634060 None:intergenic 45.0%
GCTGAATACTCACAACCTTG+AGG - chr2_1:46634503-46634522 None:intergenic 45.0%
AAACAGACTTCATGGTGCAC+AGG - chr2_1:46634591-46634610 None:intergenic 45.0%
CGGCTTGAAAACAGACTTCA+TGG - chr2_1:46634599-46634618 None:intergenic 45.0%
AGCTAGCAAGTGCGTAAACA+CGG - chr2_1:46634619-46634638 None:intergenic 45.0%
ACAGAAAGTAGCCACAGGAA+AGG + chr2_1:46634657-46634676 Msa0209240:intron 45.0%
TGACACAGAAACCTTTCCTG+TGG - chr2_1:46634671-46634690 None:intergenic 45.0%
GAGACAGAGAAGACAGCAAA+TGG - chr2_1:46634714-46634733 None:intergenic 45.0%
TATCCCTAAGCCTGACACTT+GGG - chr2_1:46634960-46634979 None:intergenic 45.0%
ATATCCCTAAGCCTGACACT+TGG - chr2_1:46634961-46634980 None:intergenic 45.0%
AGCTCATGACCCTACCTTTA+AGG - chr2_1:46635678-46635697 None:intergenic 45.0%
TAAAGGTAGGGTCATGAGCT+TGG + chr2_1:46635678-46635697 Msa0209240:intron 45.0%
!! CTTCTGGAATATGGGGCATT+TGG + chr2_1:46635996-46636015 Msa0209240:intron 45.0%
ATTACCTCTTGAGGTCTGTC+TGG - chr2_1:46636400-46636419 None:intergenic 45.0%
!! TTGACTTTTGGGTATGGGAG+GGG + chr2_1:46636625-46636644 Msa0209240:intron 45.0%
! CAATTCGAATCGGGATTGGT+AGG - chr2_1:46636770-46636789 None:intergenic 45.0%
AAATATGTGTGCGTGTCTGC+GGG - chr2_1:46637124-46637143 None:intergenic 45.0%
! CCTCAGATTAGTCGTTCCTT+GGG - chr2_1:46637166-46637185 None:intergenic 45.0%
CCAAGGAACGACTAATCTGA+GGG + chr2_1:46637164-46637183 Msa0209240:intron 45.0%
CAAGGAACGACTAATCTGAG+GGG + chr2_1:46637165-46637184 Msa0209240:intron 45.0%
CCAATTCCACCATCCATTTG+CGG + chr2_1:46637189-46637208 Msa0209240:intron 45.0%
CAATTCCACCATCCATTTGC+GGG + chr2_1:46637190-46637209 Msa0209240:intron 45.0%
AATTCCACCATCCATTTGCG+GGG + chr2_1:46637191-46637210 Msa0209240:intron 45.0%
!! CTTTGCTCTGGCTTTAAACG+GGG - chr2_1:46637217-46637236 None:intergenic 45.0%
!! GCTTTGCTCTGGCTTTAAAC+GGG - chr2_1:46637218-46637237 None:intergenic 45.0%
!!! GTCTCAGTTTTGATTCCCAC+CGG - chr2_1:46637271-46637290 None:intergenic 45.0%
!! ACACCTTTTCTGGTCTCTGT+GGG + chr2_1:46637468-46637487 Msa0209240:CDS 45.0%
!! TAGGCCTTTAGTTTGAGCTC+TGG + chr2_1:46637864-46637883 Msa0209240:three_prime_UTR 45.0%
GCTACCAGAGCTCAAACTAA+AGG - chr2_1:46637871-46637890 None:intergenic 45.0%
!! AATAATATAATACTAATAAT+GGG + chr2_1:46627263-46627282 Msa0209240:exon 5.0%
!! CTAAAAAAAAAAATAAAAAA+TGG - chr2_1:46628633-46628652 None:intergenic 5.0%
!!! ATTTTTTTTTTAAAGATTAA+TGG + chr2_1:46628690-46628709 Msa0209240:intron 5.0%
!!! TATATATTTTATAGTTATAT+AGG + chr2_1:46629104-46629123 Msa0209240:intron 5.0%
!! GAATAATTAAATAAAAATTA+AGG + chr2_1:46632437-46632456 Msa0209240:intron 5.0%
!! ATAATTAAATAACAAAATTA+AGG - chr2_1:46632743-46632762 None:intergenic 5.0%
!!! AATAAATTTTAAACAAATTA+TGG + chr2_1:46632772-46632791 Msa0209240:intron 5.0%
!! AAAAAAAAAAAAAAAATAGT+AGG - chr2_1:46632981-46633000 None:intergenic 5.0%
CGATGAGAAAGGTTCAGAGG+TGG - chr2_1:46627239-46627258 None:intergenic 50.0%
!! CGAGAGGTGTCATTTGAGGA+AGG - chr2_1:46627394-46627413 None:intergenic 50.0%
GACGACTCGAGGAATCTAAC+TGG - chr2_1:46627557-46627576 None:intergenic 50.0%
CCTTCCAAATTGACGACTCG+AGG - chr2_1:46627568-46627587 None:intergenic 50.0%
CCTCGAGTCGTCAATTTGGA+AGG + chr2_1:46627565-46627584 Msa0209240:intron 50.0%
GGAAATGTTAACTGGTGCCC+CGG + chr2_1:46627613-46627632 Msa0209240:intron 50.0%
GAAATGTTAACTGGTGCCCC+GGG + chr2_1:46627614-46627633 Msa0209240:intron 50.0%
TAAGGTCTAACCAATGCCCG+GGG - chr2_1:46627633-46627652 None:intergenic 50.0%
GTGGCCTAAGCTAGGATTTC+TGG + chr2_1:46627708-46627727 Msa0209240:intron 50.0%
GCAAGGACATGTTCAAGACC+TGG + chr2_1:46627925-46627944 Msa0209240:CDS 50.0%
GTTGGGGCCATACAATCTGA+TGG - chr2_1:46628265-46628284 None:intergenic 50.0%
CCCTATTGAGGGACAACTCT+TGG + chr2_1:46628565-46628584 Msa0209240:intron 50.0%
GCCAAGAGTTGTCCCTCAAT+AGG - chr2_1:46628569-46628588 None:intergenic 50.0%
TGGAAAAGGGGGCCAACTTT+AGG + chr2_1:46628710-46628729 Msa0209240:intron 50.0%
GTAGGCCCCATATATGAAGG+AGG - chr2_1:46628736-46628755 None:intergenic 50.0%
!! CTGCAGGATTTGGTGCTAAG+TGG + chr2_1:46629348-46629367 Msa0209240:CDS 50.0%
!! GGATTTGGTGCTAAGTGGCT+TGG + chr2_1:46629353-46629372 Msa0209240:CDS 50.0%
GTTAAGATCCAGGCACCAAC+TGG - chr2_1:46629721-46629740 None:intergenic 50.0%
!! TGGTTTGAGGAGTAGTGGGT+TGG + chr2_1:46629958-46629977 Msa0209240:intron 50.0%
!! AGTGGGTTGGATAGAAGTGC+GGG + chr2_1:46629971-46629990 Msa0209240:intron 50.0%
AGTGCGGGGATGCATTTGTT+AGG + chr2_1:46629986-46630005 Msa0209240:intron 50.0%
TCATGCATTGAGGAGAGGGA+AGG + chr2_1:46630121-46630140 Msa0209240:intron 50.0%
!! GCCATTGGGGAAAAGCATTC+AGG - chr2_1:46630463-46630482 None:intergenic 50.0%
GGTTCTCGCATATCTGCCAT+TGG - chr2_1:46630478-46630497 None:intergenic 50.0%
AATTGGGGTTCCTTAGAGCC+TGG - chr2_1:46630556-46630575 None:intergenic 50.0%
!! TCTTGGGTGGCTAGCCTAAT+TGG + chr2_1:46630858-46630877 Msa0209240:intron 50.0%
GCTTAAGAGCTCTACGATGG+TGG + chr2_1:46631101-46631120 Msa0209240:intron 50.0%
!! CACCGCACCAATTTTTGAGG+TGG - chr2_1:46631183-46631202 None:intergenic 50.0%
CCTCAAAAATTGGTGCGGTG+CGG + chr2_1:46631183-46631202 Msa0209240:intron 50.0%
CTCAAAAATTGGTGCGGTGC+GGG + chr2_1:46631184-46631203 Msa0209240:intron 50.0%
!!! GCGTAGTGGGCACTATTTTG+TGG + chr2_1:46631215-46631234 Msa0209240:intron 50.0%
GGTAGGAGTTCTCTGAACTC+TGG - chr2_1:46631590-46631609 None:intergenic 50.0%
CTGGTCTAGGAGCTTATCTC+TGG - chr2_1:46631611-46631630 None:intergenic 50.0%
ACAGGAAAGCCTAGAGGATG+AGG - chr2_1:46631678-46631697 None:intergenic 50.0%
GACTATCAATGCCACGTGGA+TGG + chr2_1:46631719-46631738 Msa0209240:intron 50.0%
ATGACTGTAGGCTGCACAAC+TGG - chr2_1:46632545-46632564 None:intergenic 50.0%
AGAGAGAGATTGGAGTGCGA+TGG + chr2_1:46632580-46632599 Msa0209240:intron 50.0%
AGGGGTTGTGCTACCTGTAA+GGG - chr2_1:46633544-46633563 None:intergenic 50.0%
TAGGGGTTGTGCTACCTGTA+AGG - chr2_1:46633545-46633564 None:intergenic 50.0%
TGGTCTACAACACAGGAGGA+GGG - chr2_1:46633573-46633592 None:intergenic 50.0%
ATGGTCTACAACACAGGAGG+AGG - chr2_1:46633574-46633593 None:intergenic 50.0%
GACAACGTCATTGTCGAGGA+GGG - chr2_1:46633597-46633616 None:intergenic 50.0%
TGACAACGTCATTGTCGAGG+AGG - chr2_1:46633598-46633617 None:intergenic 50.0%
TCCTCGACAATGACGTTGTC+AGG + chr2_1:46633597-46633616 Msa0209240:intron 50.0%
TCCTGACAACGTCATTGTCG+AGG - chr2_1:46633601-46633620 None:intergenic 50.0%
ACGTTTGAACCCCAAGCTCA+GGG - chr2_1:46633624-46633643 None:intergenic 50.0%
AACGTTTGAACCCCAAGCTC+AGG - chr2_1:46633625-46633644 None:intergenic 50.0%
GTTGTTGAAAGGGGTGGTCT+CGG + chr2_1:46633791-46633810 Msa0209240:intron 50.0%
GTCAGCGACAAGTAGTTTGG+TGG + chr2_1:46633837-46633856 Msa0209240:intron 50.0%
! AGCGACAAGTAGTTTGGTGG+AGG + chr2_1:46633840-46633859 Msa0209240:intron 50.0%
!! TGGTGGAGGAAGGTTTTGTG+GGG + chr2_1:46633854-46633873 Msa0209240:intron 50.0%
TTGTAGGAAGGCTCGATCAG+CGG - chr2_1:46633992-46634011 None:intergenic 50.0%
TGCTTGTGTTTCAGCTCCAG+CGG - chr2_1:46634151-46634170 None:intergenic 50.0%
TGTCACTATGAGGCTGAGTG+TGG + chr2_1:46634543-46634562 Msa0209240:intron 50.0%
CTGAGTGTGGACACAAGACT+GGG + chr2_1:46634556-46634575 Msa0209240:intron 50.0%
TGAGTGTGGACACAAGACTG+GGG + chr2_1:46634557-46634576 Msa0209240:intron 50.0%
! GGACACAAGACTGGGGATTT+TGG + chr2_1:46634564-46634583 Msa0209240:intron 50.0%
CATGCACAGAAAGTAGCCAC+AGG + chr2_1:46634652-46634671 Msa0209240:intron 50.0%
ATGCCCAAGTGTCAGGCTTA+GGG + chr2_1:46634954-46634973 Msa0209240:intron 50.0%
!! TGACTTTTGGGTATGGGAGG+GGG + chr2_1:46636626-46636645 Msa0209240:intron 50.0%
AATATGTGTGCGTGTCTGCG+GGG - chr2_1:46637123-46637142 None:intergenic 50.0%
AAAACTCGGTATCCAGCCCA+AGG + chr2_1:46637147-46637166 Msa0209240:intron 50.0%
! AGATTAGTCGTTCCTTGGGC+TGG - chr2_1:46637162-46637181 None:intergenic 50.0%
CCCAAGGAACGACTAATCTG+AGG + chr2_1:46637163-46637182 Msa0209240:intron 50.0%
! CCCTCAGATTAGTCGTTCCT+TGG - chr2_1:46637167-46637186 None:intergenic 50.0%
!! CCGCAAATGGATGGTGGAAT+TGG - chr2_1:46637192-46637211 None:intergenic 50.0%
AGCCAGAGCAAAGCTCTGTA+TGG + chr2_1:46637224-46637243 Msa0209240:intron 50.0%
GTCCATACAGAGCTTTGCTC+TGG - chr2_1:46637229-46637248 None:intergenic 50.0%
ATGGACCAGTCCACCGAAAT+TGG + chr2_1:46637243-46637262 Msa0209240:intron 50.0%
! ATTCCCACCGGTGCCAATTT+CGG - chr2_1:46637259-46637278 None:intergenic 50.0%
TGAATGCCCTGTTCCACTTG+AGG + chr2_1:46637292-46637311 Msa0209240:intron 50.0%
GAATGCCCTGTTCCACTTGA+GGG + chr2_1:46637293-46637312 Msa0209240:intron 50.0%
ACATGCCCTCAAGTGGAACA+GGG - chr2_1:46637301-46637320 None:intergenic 50.0%
TACATGCCCTCAAGTGGAAC+AGG - chr2_1:46637302-46637321 None:intergenic 50.0%
! CAGAGACCAGAAAAGGTGTG+AGG - chr2_1:46637467-46637486 None:intergenic 50.0%
!! CACACCTTTTCTGGTCTCTG+TGG + chr2_1:46637467-46637486 Msa0209240:CDS 50.0%
!! CACCTTTTCTGGTCTCTGTG+GGG + chr2_1:46637469-46637488 Msa0209240:CDS 50.0%
!! ACCTTTTCTGGTCTCTGTGG+GGG + chr2_1:46637470-46637489 Msa0209240:CDS 50.0%
GTATGCGCTCACTACGATCA+AGG + chr2_1:46637835-46637854 Msa0209240:three_prime_UTR 50.0%
GTCTTTCGAATTGGGCGGTG+TGG - chr2_1:46627092-46627111 None:intergenic 55.0%
TCAACTCTCCCAACACCGTG+CGG - chr2_1:46627506-46627525 None:intergenic 55.0%
TTTGGAAGGTAGCCCAGTCC+CGG + chr2_1:46627579-46627598 Msa0209240:intron 55.0%
GCGCATACTCTTGCTCCATC+AGG + chr2_1:46629413-46629432 Msa0209240:CDS 55.0%
!! AGGGGTCTCCTTTAGAGCTG+TGG + chr2_1:46629637-46629656 Msa0209240:intron 55.0%
!! GTGGGTTGGATAGAAGTGCG+GGG + chr2_1:46629972-46629991 Msa0209240:intron 55.0%
GCATTGAGGAGAGGGAAGGA+AGG + chr2_1:46630125-46630144 Msa0209240:intron 55.0%
GGCGCAGCCACCTCAAAAAT+TGG + chr2_1:46631173-46631192 Msa0209240:intron 55.0%
! CCGCACCGCACCAATTTTTG+AGG - chr2_1:46631186-46631205 None:intergenic 55.0%
! GTGGGCACTATTTTGTGGCG+CGG + chr2_1:46631220-46631239 Msa0209240:intron 55.0%
GACCAAACCATCGTTCTGCG+TGG + chr2_1:46631376-46631395 Msa0209240:intron 55.0%
CACCACGCAGAACGATGGTT+TGG - chr2_1:46631381-46631400 None:intergenic 55.0%
ACACACACCACGCAGAACGA+TGG - chr2_1:46631386-46631405 None:intergenic 55.0%
CGTGGTGTGTGTGTGTGTAG+CGG + chr2_1:46631394-46631413 Msa0209240:intron 55.0%
GTCTACAACACAGGAGGAGG+GGG - chr2_1:46633571-46633590 None:intergenic 55.0%
GGTCTACAACACAGGAGGAG+GGG - chr2_1:46633572-46633591 None:intergenic 55.0%
GGGATGGTCTACAACACAGG+AGG - chr2_1:46633577-46633596 None:intergenic 55.0%
GGAGGGATGGTCTACAACAC+AGG - chr2_1:46633580-46633599 None:intergenic 55.0%
ACGTCATTGTCGAGGAGGGA+TGG - chr2_1:46633593-46633612 None:intergenic 55.0%
GTTGTCAGGACCCTGAGCTT+GGG + chr2_1:46633611-46633630 Msa0209240:intron 55.0%
TTGTCAGGACCCTGAGCTTG+GGG + chr2_1:46633612-46633631 Msa0209240:intron 55.0%
GTCTCGGTGGAGATTGGTGT+TGG + chr2_1:46633807-46633826 Msa0209240:intron 55.0%
GCTGAGTGTGGACACAAGAC+TGG + chr2_1:46634555-46634574 Msa0209240:intron 55.0%
CATGCCCAAGTGTCAGGCTT+AGG + chr2_1:46634953-46634972 Msa0209240:intron 55.0%
ACAGCCAGACAGACCTCAAG+AGG + chr2_1:46636393-46636412 Msa0209240:CDS 55.0%
!! GACTTTTGGGTATGGGAGGG+GGG + chr2_1:46636627-46636646 Msa0209240:intron 55.0%
!! ACTTTTGGGTATGGGAGGGG+GGG + chr2_1:46636628-46636647 Msa0209240:intron 55.0%
ATATGTGTGCGTGTCTGCGG+GGG - chr2_1:46637122-46637141 None:intergenic 55.0%
TTTAAACGGGGCCCCGCAAA+TGG - chr2_1:46637205-46637224 None:intergenic 55.0%
CAGTCCACCGAAATTGGCAC+CGG + chr2_1:46637249-46637268 Msa0209240:intron 55.0%
!! CACTGGCCTCACACCTTTTC+TGG + chr2_1:46637458-46637477 Msa0209240:CDS 55.0%
GTCTCTGTGGGGGCTAATTC+AGG + chr2_1:46637480-46637499 Msa0209240:CDS 55.0%
CAACTCTCCCAACACCGTGC+GGG - chr2_1:46627505-46627524 None:intergenic 60.0%
TTAACTGGTGCCCCGGGCAT+TGG + chr2_1:46627620-46627639 Msa0209240:intron 60.0%
!! AGTCTCGTAGCGGACCCAAG+TGG + chr2_1:46627689-46627708 Msa0209240:intron 60.0%
GGACCCAAGTGGCCTAAGCT+AGG + chr2_1:46627700-46627719 Msa0209240:intron 60.0%
GAGGAGAGGGAAGGAAGGCA+AGG + chr2_1:46630130-46630149 Msa0209240:intron 60.0%
GTCAAAGCGGAAATGCGGCG+CGG + chr2_1:46631152-46631171 Msa0209240:intron 60.0%
AAATTGGTGCGGTGCGGGAG+CGG + chr2_1:46631189-46631208 Msa0209240:intron 60.0%
TGTGTGTGTAGCGGCCGCTT+TGG + chr2_1:46631403-46631422 Msa0209240:intron 60.0%
AGCCCGCTATTCAGCAGTGC+GGG - chr2_1:46631444-46631463 None:intergenic 60.0%
CAGCCCGCTATTCAGCAGTG+CGG - chr2_1:46631445-46631464 None:intergenic 60.0%
ACATACGACACGCTCCGTCG+CGG + chr2_1:46631480-46631499 Msa0209240:intron 60.0%
TCCGCTGCGCTCCACTATAG+CGG + chr2_1:46631526-46631545 Msa0209240:intron 60.0%
GCGGCCGCTATTGACAACAG+AGG + chr2_1:46631554-46631573 Msa0209240:intron 60.0%
!! ACAGGAGGAGGGGGTGTTAG+GGG - chr2_1:46633562-46633581 None:intergenic 60.0%
!! CACAGGAGGAGGGGGTGTTA+GGG - chr2_1:46633563-46633582 None:intergenic 60.0%
!! ACACAGGAGGAGGGGGTGTT+AGG - chr2_1:46633564-46633583 None:intergenic 60.0%
CGTTGTCAGGACCCTGAGCT+TGG + chr2_1:46633610-46633629 Msa0209240:intron 60.0%
GTTGAAAGGGGTGGTCTCGG+TGG + chr2_1:46633794-46633813 Msa0209240:intron 60.0%
TAGGAAGGCTCGATCAGCGG+TGG - chr2_1:46633989-46634008 None:intergenic 60.0%
TATGTGTGCGTGTCTGCGGG+GGG - chr2_1:46637121-46637140 None:intergenic 60.0%
! CGGTGCCAATTTCGGTGGAC+TGG - chr2_1:46637251-46637270 None:intergenic 60.0%
! TCCACCGAAATTGGCACCGG+TGG + chr2_1:46637252-46637271 Msa0209240:intron 60.0%
!! CCACCGAAATTGGCACCGGT+GGG + chr2_1:46637253-46637272 Msa0209240:intron 60.0%
GCCCCCACAGAGACCAGAAA+AGG - chr2_1:46637474-46637493 None:intergenic 60.0%
AATTGGTGCGGTGCGGGAGC+GGG + chr2_1:46631190-46631209 Msa0209240:intron 65.0%
CGCCCCGCACTGCTGAATAG+CGG + chr2_1:46631438-46631457 Msa0209240:intron 65.0%
GCCCCGCACTGCTGAATAGC+GGG + chr2_1:46631439-46631458 Msa0209240:intron 65.0%
GCCCGCTATTCAGCAGTGCG+GGG - chr2_1:46631443-46631462 None:intergenic 65.0%
! CCCGCTATAGTGGAGCGCAG+CGG - chr2_1:46631530-46631549 None:intergenic 65.0%
CCGCTGCGCTCCACTATAGC+GGG + chr2_1:46631527-46631546 Msa0209240:intron 65.0%
! CTGCGCTCCACTATAGCGGG+TGG + chr2_1:46631530-46631549 Msa0209240:intron 65.0%
!! CTCCACTATAGCGGGTGGCG+CGG + chr2_1:46631535-46631554 Msa0209240:intron 65.0%
GGGGTGGTCTCGGTGGAGAT+TGG + chr2_1:46633801-46633820 Msa0209240:intron 65.0%
GAAGGCTCGATCAGCGGTGG+CGG - chr2_1:46633986-46634005 None:intergenic 65.0%
AACGGGGCCCCGCAAATGGA+TGG - chr2_1:46637201-46637220 None:intergenic 65.0%
! CCCACCGGTGCCAATTTCGG+TGG - chr2_1:46637256-46637275 None:intergenic 65.0%
ATTGGTGCGGTGCGGGAGCG+GGG + chr2_1:46631191-46631210 Msa0209240:intron 70.0%
TCCGTCGCGGCTAGGAGCAG+TGG + chr2_1:46631493-46631512 Msa0209240:intron 70.0%
CCCACTGCTCCTAGCCGCGA+CGG - chr2_1:46631497-46631516 None:intergenic 70.0%
CCGTCGCGGCTAGGAGCAGT+GGG + chr2_1:46631494-46631513 Msa0209240:intron 70.0%
GCGTGTCTGCGGGGGGATGT+GGG - chr2_1:46637114-46637133 None:intergenic 70.0%
TGCGTGTCTGCGGGGGGATG+TGG - chr2_1:46637115-46637134 None:intergenic 70.0%
GGGGCCCCGCAAATGGATGG+TGG - chr2_1:46637198-46637217 None:intergenic 70.0%
! TGCGGGAGCGGGGAGCGTAG+TGG + chr2_1:46631201-46631220 Msa0209240:intron 75.0%
! GCGGGAGCGGGGAGCGTAGT+GGG + chr2_1:46631202-46631221 Msa0209240:intron 75.0%
CGACACGCTCCGTCGCGGCT+AGG + chr2_1:46631485-46631504 Msa0209240:intron 75.0%
GGCCGCGCCACCCGCTATAG+TGG - chr2_1:46631540-46631559 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 46627047 46638039 46627047 ID=Msa0209240;Name=Msa0209240
chr2_1 mRNA 46627047 46638039 46627047 ID=Msa0209240-mRNA-1;Parent=Msa0209240;Name=Msa0209240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=234|1|1|1|1|1|11|325|377
chr2_1 exon 46627047 46627417 46627047 ID=Msa0209240-mRNA-1:exon:13300;Parent=Msa0209240-mRNA-1
chr2_1 exon 46627917 46628008 46627917 ID=Msa0209240-mRNA-1:exon:13301;Parent=Msa0209240-mRNA-1
chr2_1 exon 46628214 46628320 46628214 ID=Msa0209240-mRNA-1:exon:13302;Parent=Msa0209240-mRNA-1
chr2_1 exon 46629329 46629434 46629329 ID=Msa0209240-mRNA-1:exon:13303;Parent=Msa0209240-mRNA-1
chr2_1 exon 46630485 46630607 46630485 ID=Msa0209240-mRNA-1:exon:13304;Parent=Msa0209240-mRNA-1
chr2_1 exon 46631917 46632008 46631917 ID=Msa0209240-mRNA-1:exon:13305;Parent=Msa0209240-mRNA-1
chr2_1 exon 46635144 46635228 46635144 ID=Msa0209240-mRNA-1:exon:13306;Parent=Msa0209240-mRNA-1
chr2_1 exon 46636128 46636233 46636128 ID=Msa0209240-mRNA-1:exon:13307;Parent=Msa0209240-mRNA-1
chr2_1 exon 46636348 46636414 46636348 ID=Msa0209240-mRNA-1:exon:13308;Parent=Msa0209240-mRNA-1
chr2_1 exon 46637409 46637501 46637409 ID=Msa0209240-mRNA-1:exon:13309;Parent=Msa0209240-mRNA-1
chr2_1 exon 46637589 46638039 46637589 ID=Msa0209240-mRNA-1:exon:13310;Parent=Msa0209240-mRNA-1
chr2_1 five_prime_UTR 46627047 46627280 46627047 ID=Msa0209240-mRNA-1:five_prime_utr;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46627281 46627417 46627281 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46627917 46628008 46627917 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46628214 46628320 46628214 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46629329 46629434 46629329 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46630485 46630607 46630485 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46631917 46632008 46631917 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46635144 46635228 46635144 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46636128 46636233 46636128 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46636348 46636414 46636348 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46637409 46637501 46637409 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 CDS 46637589 46637714 46637589 ID=Msa0209240-mRNA-1:cds;Parent=Msa0209240-mRNA-1
chr2_1 three_prime_UTR 46637715 46638039 46637715 ID=Msa0209240-mRNA-1:three_prime_utr;Parent=Msa0209240-mRNA-1
Gene Sequence

>Msa0209240

ATGGGTGGAAAAGTTAAGATCTGGAATCCCGTTGAAATCGCAGAACAAGCTCGGAATGATTACGCTTCGCAGATTTTTCCTTCTCTTCTCTCCATTGATCCTTCTCTTTCCCTTCCTCAAATGACACCTCTCGTCATTAATTTGTGCAAGGACATGTTCAAGACCTGGTCAAGTTTAGGTGATTCTTGCTTTAAAGTTGAGAAAATTTCTGGAGGCATAACAAATTTATTACTGAAGGTTTCAGTTAAACAAGGGGACTCTATTGATGATATTATAACCATCAGATTGTATGGCCCCAACACCGAGCATATCATTGATCGCTTTCGAGAATTGCAGGCCATCAAATACATCACTGCTGCAGGATTTGGTGCTAAGTGGCTTGGAATATTTGGAAATGGCATAGTGCAATCTTTTATTAATGCGCATACTCTTGCTCCATCAGATATGCGAGAACCAAAACTGGTTGCCAAAATAGCCAAACAACTGCAAAAATTTCACGGTGTGGAAATTCCAGGCTCTAAGGAACCCCAATTATGGAATGATATCTGGAAGTTTTTTGAGAAAGCATCTGTTCTAGAATTTGGTGATAATGAAAAGCAAAAGACTTACAAGACAGTTTCATTCAAGGAAGTTCATGATGAAATTTATGAGCTCCAGGTGTTGTGTGATCGTCTCAAATCTCCTGTAATTTTTTCTCACAATGACTTGCTTTCTGGAAACATAATGATTAATCATGAAGAAGATAAACTTTACTTCATTGATTATGAGTATGCATCATACAACTACAGAGGCTATGACATAGGGAATCACTTTGCAGAATATGCTGGTTTTGAATGTGATTACTCCTTGTACCCAAATATGAACGAACAATATCATTTCTTCAGGCATTACTTACAGCCAGACAGACCTCAAGAGGTGTCTGAGAATGATCTTAAAACTTTGTATGTTGAGGTAAATACATATGCACTGGCCTCACACCTTTTCTGGTCTCTGTGGGGGCTAATTCAGGCAAAGATGTCCCCAATAGAATTTGATTATCTTGGTTACTTTTTCCTTCGATACAACGAGTACAAAAGGCAGAAAGAAAAGCTTGTATCGATGGCGCTATCCTACCTTTTAGAAAGGAATGAGTAG

Protein sequence

>Msa0209240

MGGKVKIWNPVEIAEQARNDYASQIFPSLLSIDPSLSLPQMTPLVINLCKDMFKTWSSLGDSCFKVEKISGGITNLLLKVSVKQGDSIDDIITIRLYGPNTEHIIDRFRELQAIKYITAAGFGAKWLGIFGNGIVQSFINAHTLAPSDMREPKLVAKIAKQLQKFHGVEIPGSKEPQLWNDIWKFFEKASVLEFGDNEKQKTYKTVSFKEVHDEIYELQVLCDRLKSPVIFSHNDLLSGNIMINHEEDKLYFIDYEYASYNYRGYDIGNHFAEYAGFECDYSLYPNMNEQYHFFRHYLQPDRPQEVSENDLKTLYVEVNTYALASHLFWSLWGLIQAKMSPIEFDYLGYFFLRYNEYKRQKEKLVSMALSYLLERNE*