AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0208070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208070 MtrunA17_Chr2g0307011 98.408 377 6 0 1 377 1 377 0.0 773
Msa0208070 MtrunA17_Chr3g0081621 34.688 320 194 5 56 366 140 453 2.44e-55 189
Msa0208070 MtrunA17_Chr8g0354091 33.841 328 195 7 48 366 41 355 8.48e-55 184
Msa0208070 MtrunA17_Chr6g0466631 34.056 323 190 6 59 366 29 343 2.64e-54 182
Msa0208070 MtrunA17_Chr1g0201341 33.538 325 191 8 57 365 27 342 1.26e-49 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208070 AT2G26830.1 63.897 349 126 0 24 372 22 370 4.28e-171 482
Msa0208070 AT4G09760.1 35.577 312 185 6 64 366 38 342 4.30e-56 187
Msa0208070 AT4G09760.2 35.577 312 185 6 64 366 38 342 4.30e-56 187
Msa0208070 AT1G74320.1 32.209 326 198 9 56 368 32 347 4.46e-53 179
Msa0208070 AT1G71697.1 29.769 346 223 7 31 365 8 344 4.82e-48 166
Msa0208070 AT4G09760.3 30.208 192 126 4 64 253 38 223 5.54e-22 94.4
Msa0208070 AT4G09760.4 29.143 175 116 4 64 236 38 206 6.39e-18 82.0

Find 97 sgRNAs with CRISPR-Local

Find 749 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAGATATCATTCCATAAT+TGG 0.099867 2_1:-42292064 None:intergenic
TGATATTGTTCGTTCATATT+TGG 0.100547 2_1:-42297846 None:intergenic
TCTCACAATGACTTGCTTTC+TGG 0.116891 2_1:+42296674 Msa0208070:CDS
TTGCAGTTGTTTGGCTATTT+TGG 0.127146 2_1:-42292003 None:intergenic
GCAGCATCTGTTCTAGAATT+TGG 0.157391 2_1:+42293407 Msa0208070:intron
TTTAAAGTTGAGAAAATTTC+TGG 0.169623 2_1:+42289462 Msa0208070:CDS
GCTAAGTGGCTTGGAATATT+TGG 0.191747 2_1:+42290856 Msa0208070:CDS
CAATAATATAATACTAATAA+TGG 0.204970 2_1:+42288756 Msa0208070:exon
TCCTATTCTGTCTTTCGAAT+TGG 0.255059 2_1:-42288592 None:intergenic
CCCAATTATGGAATGATATC+TGG 0.258364 2_1:+42292063 Msa0208070:CDS
TCTACTCATTCCTTTCTAAA+AGG 0.267387 2_1:-42299188 None:intergenic
GATATTGTTCGTTCATATTT+GGG 0.276266 2_1:-42297845 None:intergenic
CCAGATATCATTCCATAATT+GGG 0.278940 2_1:-42292063 None:intergenic
GTATTGTAATCCAGAAAATT+AGG 0.282777 2_1:+42299397 Msa0208070:three_prime_UTR
TACATCACTGCTGCAGGATT+TGG 0.299530 2_1:+42290832 Msa0208070:CDS
CCAATAGAATTTGATTATCT+TGG 0.305896 2_1:+42299096 Msa0208070:CDS
CAAGATAATCAAATTCTATT+GGG 0.308596 2_1:-42299095 None:intergenic
GCTCTAAGGAACCCCAATTA+TGG 0.311734 2_1:+42292051 Msa0208070:CDS
CCTATTCTGTCTTTCGAATT+GGG 0.312336 2_1:-42288591 None:intergenic
CCAAGATAATCAAATTCTAT+TGG 0.314209 2_1:-42299096 None:intergenic
ACTACGATCAAGGCAAATTT+AGG 0.324943 2_1:+42299340 Msa0208070:three_prime_UTR
AAAGGAGAATGGTGTTTATT+CGG 0.342021 2_1:-42288619 None:intergenic
AACATTTAACTACATGAATC+AGG 0.346353 2_1:-42299260 None:intergenic
TCAATGATATGCTCGGTGTT+GGG 0.351100 2_1:-42289772 None:intergenic
TTCAAGACCTGGTCAAGTTT+AGG 0.351629 2_1:+42289429 Msa0208070:CDS
TGGATTACAATACAACAATA+AGG 0.362339 2_1:-42299387 None:intergenic
ACGAACAATATCATTTCTTC+AGG 0.383658 2_1:+42297856 Msa0208070:CDS
GCTTGTTCTGCGATTTCAAC+GGG 0.403905 2_1:-42288802 None:intergenic
TGATCGCTTTCGAGAATTGC+AGG 0.404652 2_1:+42289792 Msa0208070:CDS
TTCAGATGACATAATTTGTT+CGG 0.410215 2_1:+42299506 Msa0208070:three_prime_UTR
TGTGGAAATTCCAGGCTCTA+AGG 0.418229 2_1:+42292037 Msa0208070:CDS
ATTACCTCTTGAGGTCTGTC+TGG 0.424572 2_1:-42297891 None:intergenic
TGGCTTGGAATATTTGGAAA+TGG 0.427165 2_1:+42290862 Msa0208070:CDS
ATCAATGATATGCTCGGTGT+TGG 0.428005 2_1:-42289773 None:intergenic
ATTATAACCATCAGATTGTA+TGG 0.431135 2_1:+42289748 Msa0208070:CDS
AATAATATAATACTAATAAT+GGG 0.437841 2_1:+42288757 Msa0208070:exon
AAGGGAAAGAGAAGGATCAA+TGG 0.457811 2_1:-42288866 None:intergenic
ATCAAATACATCACTGCTGC+AGG 0.459460 2_1:+42290826 Msa0208070:CDS
TGGGTGGAAAAGTTAAGATC+TGG 0.470594 2_1:+42288776 Msa0208070:CDS
GTATGCGCTCACTACGATCA+AGG 0.474926 2_1:+42299330 Msa0208070:three_prime_UTR
GCGCATACTCTTGCTCCATC+AGG 0.478124 2_1:+42290907 Msa0208070:CDS
AGATATGCGAGAACCAAAAC+TGG 0.481384 2_1:+42291977 Msa0208070:intron
AATTGGGGTTCCTTAGAGCC+TGG 0.484263 2_1:-42292047 None:intergenic
TATTATTGAATCGATGAGAA+AGG 0.485724 2_1:-42288741 None:intergenic
TTCGATACAACGAGTACAAA+AGG 0.487153 2_1:+42299130 Msa0208070:CDS
TAGGCCTTTAGTTTGAGCTC+TGG 0.487772 2_1:+42299359 Msa0208070:three_prime_UTR
AGGACTAGTGATCGTATCAT+TGG 0.488928 2_1:+42288557 Msa0208070:five_prime_UTR
AGCTTGTTCTGCGATTTCAA+CGG 0.491199 2_1:-42288803 None:intergenic
TTACAAGACAGTTTCATTCA+AGG 0.491822 2_1:+42293451 Msa0208070:CDS
AACTACAGAGGCTATGACAT+AGG 0.495161 2_1:+42297660 Msa0208070:CDS
CATTCTTTCTAGATGTATTG+TGG 0.495682 2_1:+42299437 Msa0208070:three_prime_UTR
TCTTAAAACTTTGTATGTTG+AGG 0.497216 2_1:+42298918 Msa0208070:CDS
TGATGAAATTTATGAGCTCC+AGG 0.497219 2_1:+42293481 Msa0208070:CDS
TTTCACGGTGTGGAAATTCC+AGG 0.499815 2_1:+42292029 Msa0208070:CDS
TGCAGCAGTGATGTATTTGA+TGG 0.502189 2_1:-42290824 None:intergenic
TTGAAATCGCAGAACAAGCT+CGG 0.518498 2_1:+42288806 Msa0208070:CDS
GGATCAATGGAGAGAAGAGA+AGG 0.518927 2_1:-42288853 None:intergenic
CAATGATATGCTCGGTGTTG+GGG 0.521995 2_1:-42289771 None:intergenic
ATGACGAGAGGTGTCATTTG+AGG 0.522794 2_1:-42288889 None:intergenic
GGATTTGGTGCTAAGTGGCT+TGG 0.523784 2_1:+42290847 Msa0208070:CDS
GCTACCAGAGCTCAAACTAA+AGG 0.526105 2_1:-42299363 None:intergenic
CTGCAGGATTTGGTGCTAAG+TGG 0.526710 2_1:+42290842 Msa0208070:CDS
GAAAGAAAAGCTTGTATCGA+TGG 0.527863 2_1:+42299155 Msa0208070:CDS
AATCACTTTGCAGAATATGC+TGG 0.528361 2_1:+42297684 Msa0208070:CDS
CTGAAGGTTTCAGTTAAACA+AGG 0.534256 2_1:+42289709 Msa0208070:CDS
AGATAGTTTCTACTTCATCA+AGG 0.534604 2_1:+42299210 Msa0208070:three_prime_UTR
CAGATATCATTCCATAATTG+GGG 0.535171 2_1:-42292062 None:intergenic
ATAATGATTAATCATGAAGA+AGG 0.535615 2_1:+42296701 Msa0208070:CDS
CCCAATTCGAAAGACAGAAT+AGG 0.536024 2_1:+42288591 Msa0208070:five_prime_UTR
CGAGAGGTGTCATTTGAGGA+AGG 0.544148 2_1:-42288885 None:intergenic
ACTACAGAGGCTATGACATA+GGG 0.549695 2_1:+42297661 Msa0208070:CDS
ACAGCCAGACAGACCTCAAG+AGG 0.575109 2_1:+42297887 Msa0208070:CDS
TGAATGCAGTAATTTGTGCA+AGG 0.578273 2_1:+42289401 Msa0208070:intron
GTCTTTCGAATTGGGCGGTG+TGG 0.581990 2_1:-42288583 None:intergenic
TGAGGTAAATACATATGCAC+TGG 0.582931 2_1:+42298936 Msa0208070:CDS
ACTGTGATTATTACCTCTTG+AGG 0.585155 2_1:-42297900 None:intergenic
CTCATTCCTTTCTAAAAGGT+AGG 0.596387 2_1:-42299184 None:intergenic
ATGTTTGTGAGAATGAGAAA+AGG 0.598143 2_1:-42288637 None:intergenic
CGATGAGAAAGGTTCAGAGG+TGG 0.602328 2_1:-42288730 None:intergenic
AAGATAATCAAATTCTATTG+GGG 0.603378 2_1:-42299094 None:intergenic
AAAGCGATCAATGATATGCT+CGG 0.607018 2_1:-42289779 None:intergenic
GAGAGGTGTCATTTGAGGAA+GGG 0.608013 2_1:-42288884 None:intergenic
ATTTGAGGAAGGGAAAGAGA+AGG 0.609170 2_1:-42288874 None:intergenic
TGAGAATGAGAAAAGGAGAA+TGG 0.613006 2_1:-42288630 None:intergenic
AAAGTTGAGAAAATTTCTGG+AGG 0.619890 2_1:+42289465 Msa0208070:CDS
GCAAGGACATGTTCAAGACC+TGG 0.621936 2_1:+42289418 Msa0208070:CDS
GTTGGGGCCATACAATCTGA+TGG 0.622325 2_1:-42289755 None:intergenic
AGAATCACCTAAACTTGACC+AGG 0.623881 2_1:-42289436 None:intergenic
ACATTTAACTACATGAATCA+GGG 0.626795 2_1:-42299259 None:intergenic
GAAGGTTTCAGTTAAACAAG+GGG 0.631491 2_1:+42289711 Msa0208070:CDS
AATATAATACTAATAATGGG+TGG 0.636817 2_1:+42288760 Msa0208070:exon
TGAAGGTTTCAGTTAAACAA+GGG 0.637167 2_1:+42289710 Msa0208070:CDS
AATCGATGAGAAAGGTTCAG+AGG 0.640508 2_1:-42288733 None:intergenic
ATTCTGTCTTTCGAATTGGG+CGG 0.659114 2_1:-42288588 None:intergenic
AGAGTTACTGACATGACGAG+AGG 0.684298 2_1:-42288901 None:intergenic
CAGAGACCAGAAAAGGTGTG+AGG 0.696052 2_1:-42298959 None:intergenic
TATGCATCATACAACTACAG+AGG 0.713439 2_1:+42297648 Msa0208070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATAATAAAAAAT+GGG - chr2_1:42290126-42290145 None:intergenic 0.0%
!! CAATAATATAATACTAATAA+TGG + chr2_1:42288756-42288775 Msa0208070:exon 10.0%
!!! AATTTGAATTATTTAGTTTT+GGG + chr2_1:42289317-42289336 Msa0208070:intron 10.0%
!!! TATGATAATTTTGAATTTAT+TGG - chr2_1:42290574-42290593 None:intergenic 10.0%
!!! AATGAATTTTAAACAAATTA+TGG - chr2_1:42293904-42293923 None:intergenic 10.0%
!! TAATTAAATAAAAATTAAGG+TGG + chr2_1:42293934-42293953 Msa0208070:intron 10.0%
!! AAGCTAATAAAATAAATTAT+TGG - chr2_1:42294610-42294629 None:intergenic 10.0%
!! TACATTTCAAATTATATAAA+CGG - chr2_1:42294780-42294799 None:intergenic 10.0%
!!! GAAATAAATATTTATTGTTT+TGG - chr2_1:42296941-42296960 None:intergenic 10.0%
!! AGATTTACTAATAAATAAAT+AGG - chr2_1:42297565-42297584 None:intergenic 10.0%
!!! GAATTTGAATTATTTAGTTT+TGG + chr2_1:42289316-42289335 Msa0208070:intron 15.0%
!!! ATTTGAATTATTTAGTTTTG+GGG + chr2_1:42289318-42289337 Msa0208070:intron 15.0%
!!! TTTTTAAAGATTAATGGAAA+AGG + chr2_1:42290190-42290209 Msa0208070:intron 15.0%
!!! TTTTAAAGATTAATGGAAAA+GGG + chr2_1:42290191-42290210 Msa0208070:intron 15.0%
!!! ATGAAATACATTTTAAATTC+TGG - chr2_1:42290410-42290429 None:intergenic 15.0%
!! TAATATGTATTAAGTTATCA+TGG - chr2_1:42291339-42291358 None:intergenic 15.0%
!! TGAGATTTAATTAAAAAAGT+TGG - chr2_1:42291381-42291400 None:intergenic 15.0%
!!! ATTTCTTTTTCTTGAATTTT+GGG - chr2_1:42292550-42292569 None:intergenic 15.0%
!!! AATTTCTTTTTCTTGAATTT+TGG - chr2_1:42292551-42292570 None:intergenic 15.0%
!!! TGAATTTTAAGTAATGTTTA+AGG - chr2_1:42292796-42292815 None:intergenic 15.0%
!! ATAGAAAAAGTTAGATAATA+AGG - chr2_1:42293288-42293307 None:intergenic 15.0%
!!! AAAACTTTTAGATTTAAGAT+TGG + chr2_1:42293617-42293636 Msa0208070:intron 15.0%
!! ATTAAATAACAAAATTAAGG+TGG - chr2_1:42294234-42294253 None:intergenic 15.0%
!! AATATTATATATGCATAACT+TGG + chr2_1:42294956-42294975 Msa0208070:intron 15.0%
!!! AAATATTAAGTTTTATTCCT+AGG + chr2_1:42295821-42295840 Msa0208070:intron 15.0%
!! AAAACCAAATAAATAGAAAT+TGG + chr2_1:42296382-42296401 Msa0208070:intron 15.0%
!! TAATCCAATTTCTATTTATT+TGG - chr2_1:42296389-42296408 None:intergenic 15.0%
!!! TATATTTTTTATTTTGCAAC+AGG + chr2_1:42296616-42296635 Msa0208070:intron 15.0%
!! TAGTTTATAATAAAGTCATA+AGG + chr2_1:42297456-42297475 Msa0208070:intron 15.0%
!!! ATATAGGTTATTTTCTTTTT+CGG + chr2_1:42298843-42298862 Msa0208070:intron 15.0%
!!! TAACTACTTTTTTTTTTATC+AGG - chr2_1:42299287-42299306 None:intergenic 15.0%
!!! AATATAATACTAATAATGGG+TGG + chr2_1:42288760-42288779 Msa0208070:exon 20.0%
!! AAAGTGAAAAAATTTGCAAA+AGG - chr2_1:42288961-42288980 None:intergenic 20.0%
!!! CAAGCAATCATTTTTTTTTA+AGG - chr2_1:42289144-42289163 None:intergenic 20.0%
!! CTTAAAAAAAAATGATTGCT+TGG + chr2_1:42289142-42289161 Msa0208070:intron 20.0%
!! TTCTAATTACTTAGTTATTG+CGG + chr2_1:42289233-42289252 Msa0208070:intron 20.0%
!! ACATTTCAATTTCTTTGATT+TGG + chr2_1:42289267-42289286 Msa0208070:intron 20.0%
!!! TTTAAAGTTGAGAAAATTTC+TGG + chr2_1:42289462-42289481 Msa0208070:CDS 20.0%
!! ACAAAAAGTAATAATTAAGC+TGG - chr2_1:42289566-42289585 None:intergenic 20.0%
!! AAGTGTTTGTAATAATTAGT+TGG + chr2_1:42289624-42289643 Msa0208070:intron 20.0%
!! ATCAATAAAACAACAAAAGT+GGG - chr2_1:42290036-42290055 None:intergenic 20.0%
!! AAAAAATTGAAGATTTGAGT+GGG - chr2_1:42290085-42290104 None:intergenic 20.0%
!!! TCAAATCTTCAATTTTTTGT+TGG + chr2_1:42290087-42290106 Msa0208070:intron 20.0%
!! TTTAAAGATTAATGGAAAAG+GGG + chr2_1:42290192-42290211 Msa0208070:intron 20.0%
!! AATAACAAAGATTATGAAGA+GGG + chr2_1:42290531-42290550 Msa0208070:intron 20.0%
!!! TTTTTTAAATTTGTACCTGA+TGG - chr2_1:42290925-42290944 None:intergenic 20.0%
!! TATTATCTAGGGATAATATT+AGG + chr2_1:42291111-42291130 Msa0208070:intron 20.0%
!! ATTATCTAGGGATAATATTA+GGG + chr2_1:42291112-42291131 Msa0208070:intron 20.0%
!! TATGCTAGAAAAATGAAAAT+TGG + chr2_1:42291432-42291451 Msa0208070:intron 20.0%
!! AAATAAAATACCAAAGAAAG+TGG + chr2_1:42291551-42291570 Msa0208070:intron 20.0%
!! AGTAAGTTATAGTATGATAT+TGG + chr2_1:42291859-42291878 Msa0208070:intron 20.0%
!! CAAAGTTCATATTAGTTATA+GGG - chr2_1:42292118-42292137 None:intergenic 20.0%
!! TCAAAGTTCATATTAGTTAT+AGG - chr2_1:42292119-42292138 None:intergenic 20.0%
!!! TATTTCTGTAATTTTTGCTA+AGG + chr2_1:42292164-42292183 Msa0208070:intron 20.0%
!! ACTTGATCAGTATATTAAAA+TGG + chr2_1:42292459-42292478 Msa0208070:intron 20.0%
!!! TTTCTTTTTCTTGAATTTTG+GGG - chr2_1:42292549-42292568 None:intergenic 20.0%
!! ATTGTATTATTGAATGTAGA+TGG + chr2_1:42292568-42292587 Msa0208070:intron 20.0%
!! TTGTATTATTGAATGTAGAT+GGG + chr2_1:42292569-42292588 Msa0208070:intron 20.0%
!!! GTATTTCTTTTTGAACAATA+TGG - chr2_1:42292766-42292785 None:intergenic 20.0%
!! TTCCTATCATATATCTTTAA+AGG + chr2_1:42293338-42293357 Msa0208070:intron 20.0%
!!! AACCTTTAAAGATATATGAT+AGG - chr2_1:42293343-42293362 None:intergenic 20.0%
!!! TATCATATATCTTTAAAGGT+TGG + chr2_1:42293342-42293361 Msa0208070:intron 20.0%
!! CAAATGAAAACAAAAAGTTA+AGG - chr2_1:42293388-42293407 None:intergenic 20.0%
!! AAAGTGATCAAAAATTTAAC+AGG - chr2_1:42293660-42293679 None:intergenic 20.0%
!!! ATGCATTTAGTTTATTTTCA+GGG - chr2_1:42294127-42294146 None:intergenic 20.0%
!! AATAGTAGGAAAAAACTTAT+GGG - chr2_1:42294461-42294480 None:intergenic 20.0%
!! AAATAGTAGGAAAAAACTTA+TGG - chr2_1:42294462-42294481 None:intergenic 20.0%
!!! TGCGTATATAAATGAAATTT+TGG + chr2_1:42294525-42294544 Msa0208070:intron 20.0%
!!! TTATGAGTTTTGATAGATTT+TGG - chr2_1:42294561-42294580 None:intergenic 20.0%
!! ATTTCAATGTTGCTAAAAAA+TGG - chr2_1:42294704-42294723 None:intergenic 20.0%
!! TTAATATGTGTCTTGTAAAT+AGG - chr2_1:42294877-42294896 None:intergenic 20.0%
!! CCAAGATATTTATTACAAAA+CGG + chr2_1:42295588-42295607 Msa0208070:intron 20.0%
!!! CTTTGGTAAATTCTTTAAAA+TGG + chr2_1:42296532-42296551 Msa0208070:intron 20.0%
!! ATAATGATTAATCATGAAGA+AGG + chr2_1:42296701-42296720 Msa0208070:CDS 20.0%
!! TAAATGCAACATACAAAAAA+TGG - chr2_1:42296880-42296899 None:intergenic 20.0%
!!! TTTCTTCAATAGTTTTGAAA+TGG + chr2_1:42297130-42297149 Msa0208070:intron 20.0%
!!! TATTCAATATTTTATCATGC+AGG + chr2_1:42297820-42297839 Msa0208070:intron 20.0%
!!! TGTCTTTTTATTTTGACTTT+TGG + chr2_1:42298108-42298127 Msa0208070:intron 20.0%
!!! GTCTTTTTATTTTGACTTTT+GGG + chr2_1:42298109-42298128 Msa0208070:intron 20.0%
!! ATTAATCTCAAATTGATACT+TGG + chr2_1:42298201-42298220 Msa0208070:intron 20.0%
!!! TAATCCTATTTTTGTAGAAT+AGG + chr2_1:42298340-42298359 Msa0208070:intron 20.0%
!!! AATCCTATTTTTGTAGAATA+GGG + chr2_1:42298341-42298360 Msa0208070:intron 20.0%
!!! TAATCTTTTACGATTCAAAT+CGG - chr2_1:42298374-42298393 None:intergenic 20.0%
!! GTACTATATAACTGTAATAT+AGG + chr2_1:42298827-42298846 Msa0208070:intron 20.0%
!! TTAATACCAATTCATAATAC+AGG + chr2_1:42298882-42298901 Msa0208070:intron 20.0%
!! TCTTATTAAAATGATATCCA+TGG + chr2_1:42299032-42299051 Msa0208070:intron 20.0%
!! TATTTCTTTGCATAATAAAC+AGG + chr2_1:42299062-42299081 Msa0208070:intron 20.0%
!! AAGATAATCAAATTCTATTG+GGG - chr2_1:42299097-42299116 None:intergenic 20.0%
!! CAAGATAATCAAATTCTATT+GGG - chr2_1:42299098-42299117 None:intergenic 20.0%
!!! GATCTTTACAAATTTTGATA+TGG + chr2_1:42299461-42299480 Msa0208070:three_prime_UTR 20.0%
! TATTATTGAATCGATGAGAA+AGG - chr2_1:42288744-42288763 None:intergenic 25.0%
!!! ACATTTCCCTTTTTTTAAAC+CGG - chr2_1:42289094-42289113 None:intergenic 25.0%
! AAAAAAAGGGAAATGTTAAC+TGG + chr2_1:42289098-42289117 Msa0208070:intron 25.0%
!!! ATTTCTTTGATTTGGACTAA+TGG + chr2_1:42289275-42289294 Msa0208070:intron 25.0%
!!! TTTCTTTGATTTGGACTAAT+GGG + chr2_1:42289276-42289295 Msa0208070:intron 25.0%
!!! TTATTACTTTTTGTTCATCC+TGG + chr2_1:42289572-42289591 Msa0208070:intron 25.0%
!!! TATTACTTTTTGTTCATCCT+GGG + chr2_1:42289573-42289592 Msa0208070:intron 25.0%
!! ATCAAATATCAACTAGTTTG+AGG - chr2_1:42289667-42289686 None:intergenic 25.0%
!!! TTCATTATTTTCAGTACTGA+AGG + chr2_1:42289693-42289712 Msa0208070:intron 25.0%
! ATTATAACCATCAGATTGTA+TGG + chr2_1:42289748-42289767 Msa0208070:CDS 25.0%
!! GCAATTTTATGTACAAAACA+TGG + chr2_1:42289833-42289852 Msa0208070:intron 25.0%
! GCAACATCAATACAAAATAA+TGG - chr2_1:42289880-42289899 None:intergenic 25.0%
! TAATACAGATTCACTCAAAA+GGG - chr2_1:42290004-42290023 None:intergenic 25.0%
! TCAATAAAACAACAAAAGTG+GGG - chr2_1:42290035-42290054 None:intergenic 25.0%
! CATCAATAAAACAACAAAAG+TGG - chr2_1:42290037-42290056 None:intergenic 25.0%
!!! CACTTTTGTTGTTTTATTGA+TGG + chr2_1:42290035-42290054 Msa0208070:intron 25.0%
! AAAAATTGAAGATTTGAGTG+GGG - chr2_1:42290084-42290103 None:intergenic 25.0%
! CAAAAAATTGAAGATTTGAG+TGG - chr2_1:42290086-42290105 None:intergenic 25.0%
! TTAAAGATTAATGGAAAAGG+GGG + chr2_1:42290193-42290212 Msa0208070:intron 25.0%
!! TCATTATCCTTGAGTATTTT+AGG + chr2_1:42290277-42290296 Msa0208070:intron 25.0%
!!! TACAGATGCTTTTAGTTTTT+CGG + chr2_1:42290382-42290401 Msa0208070:intron 25.0%
! AAATCTGCAGAACATATTAA+AGG - chr2_1:42290453-42290472 None:intergenic 25.0%
! TTCCTGAATATGCTTTAATA+AGG + chr2_1:42290477-42290496 Msa0208070:intron 25.0%
! CAATAACAAAGATTATGAAG+AGG + chr2_1:42290530-42290549 Msa0208070:intron 25.0%
! TTTGAATTTATTGGAAGTTC+AGG - chr2_1:42290565-42290584 None:intergenic 25.0%
!! GGTTTCTATTTTCTCATTTT+AGG - chr2_1:42290644-42290663 None:intergenic 25.0%
! TATTGTAATTGCTTGTGAAA+TGG + chr2_1:42290793-42290812 Msa0208070:intron 25.0%
! TTATCTAGGGATAATATTAG+GGG + chr2_1:42291113-42291132 Msa0208070:intron 25.0%
!! AAATTGAAATCGATTCAGAA+GGG - chr2_1:42291188-42291207 None:intergenic 25.0%
!! TAAATTGAAATCGATTCAGA+AGG - chr2_1:42291189-42291208 None:intergenic 25.0%
!!! GAAAAATGAAAATTGGTTTG+AGG + chr2_1:42291439-42291458 Msa0208070:intron 25.0%
!!! TTTGGTATTTTATTTGCAGT+GGG - chr2_1:42291546-42291565 None:intergenic 25.0%
! AATACAGGAAACAAGATAAA+CGG - chr2_1:42291702-42291721 None:intergenic 25.0%
!!! TGGAAATGGATTAGAAAATA+GGG - chr2_1:42291777-42291796 None:intergenic 25.0%
!!! TTGGAAATGGATTAGAAAAT+AGG - chr2_1:42291778-42291797 None:intergenic 25.0%
! CATCTGAATTAAGTATCATA+TGG + chr2_1:42291836-42291855 Msa0208070:intron 25.0%
! AAACAACTGCAAAAATTTCA+CGG + chr2_1:42292014-42292033 Msa0208070:CDS 25.0%
!! TAATTTTTGCTAAGGTGAAT+TGG + chr2_1:42292172-42292191 Msa0208070:intron 25.0%
!! TTCTCTCAAATTTGAAATCA+GGG - chr2_1:42292287-42292306 None:intergenic 25.0%
!! TTTCTCTCAAATTTGAAATC+AGG - chr2_1:42292288-42292307 None:intergenic 25.0%
! CATTACTTTAAACCGTTTAA+GGG - chr2_1:42292850-42292869 None:intergenic 25.0%
! GAAAAAGTTAGATAATAAGG+TGG - chr2_1:42293285-42293304 None:intergenic 25.0%
!! AATCTAAAAGTTTTCACACT+TGG - chr2_1:42293611-42293630 None:intergenic 25.0%
!!! GTTTATTTTCAGGGTTATTT+TGG - chr2_1:42294118-42294137 None:intergenic 25.0%
!!! CATGCATTTAGTTTATTTTC+AGG - chr2_1:42294128-42294147 None:intergenic 25.0%
! TGAATTTGTAGATATCATTC+CGG + chr2_1:42294205-42294224 Msa0208070:intron 25.0%
! TTCTAACTAGTATGTCATAT+AGG - chr2_1:42294368-42294387 None:intergenic 25.0%
! TTATTTATTCGCAAAACTCT+TGG - chr2_1:42294584-42294603 None:intergenic 25.0%
! ACTGAAATGTTAAGTTATTC+TGG - chr2_1:42294646-42294665 None:intergenic 25.0%
! TCATTATCAATGTTGTTGAA+AGG + chr2_1:42295274-42295293 Msa0208070:intron 25.0%
! CATTATCAATGTTGTTGAAA+GGG + chr2_1:42295275-42295294 Msa0208070:intron 25.0%
! ATTATCAATGTTGTTGAAAG+GGG + chr2_1:42295276-42295295 Msa0208070:intron 25.0%
!!! GTTTTTTGATTGAGAGTTTA+GGG + chr2_1:42295370-42295389 Msa0208070:intron 25.0%
!! CCGTTTTGTAATAAATATCT+TGG - chr2_1:42295591-42295610 None:intergenic 25.0%
! GATATTTGGACTTCAAATAA+TGG - chr2_1:42295694-42295713 None:intergenic 25.0%
! AAATGTGAACATCAGATATT+TGG - chr2_1:42295708-42295727 None:intergenic 25.0%
!!! ATCAATATACAGAAAGTGTT+GGG - chr2_1:42295762-42295781 None:intergenic 25.0%
!! AATCAATATACAGAAAGTGT+TGG - chr2_1:42295763-42295782 None:intergenic 25.0%
! ACAACAAAAACTCAAGTTAA+TGG + chr2_1:42295859-42295878 Msa0208070:intron 25.0%
! CAACAAAAACTCAAGTTAAT+GGG + chr2_1:42295860-42295879 Msa0208070:intron 25.0%
!! AATCTTTAGTTTAGGGATTT+AGG - chr2_1:42295918-42295937 None:intergenic 25.0%
!! TCTCTCAAATCTTTAGTTTA+GGG - chr2_1:42295925-42295944 None:intergenic 25.0%
!! TTCTCTCAAATCTTTAGTTT+AGG - chr2_1:42295926-42295945 None:intergenic 25.0%
! AGTTATGTTCACTCTATAAT+TGG + chr2_1:42295955-42295974 Msa0208070:intron 25.0%
! TAGTGACAACTATAAATAGA+TGG - chr2_1:42296025-42296044 None:intergenic 25.0%
! TATTTATAGTTGTCACTATG+AGG + chr2_1:42296027-42296046 Msa0208070:intron 25.0%
!!! TTTCACATTTTGATTGATGT+AGG - chr2_1:42296239-42296258 None:intergenic 25.0%
! TCATTGTGAGAAAAAATTAC+AGG - chr2_1:42296665-42296684 None:intergenic 25.0%
! TATTACATTATTGAGGTATG+TGG - chr2_1:42296730-42296749 None:intergenic 25.0%
! GCATAACTATTACATTATTG+AGG - chr2_1:42296737-42296756 None:intergenic 25.0%
! AACTAAAATATACAGCAACA+AGG - chr2_1:42296765-42296784 None:intergenic 25.0%
!!! AGAATATGTTTTAATGTCAG+CGG - chr2_1:42296819-42296838 None:intergenic 25.0%
! AGATATAATCATACTCTCAA+AGG - chr2_1:42296909-42296928 None:intergenic 25.0%
!! TTGAGAGTATGATTATATCT+CGG + chr2_1:42296909-42296928 Msa0208070:intron 25.0%
!!! TCTAGTATAATCCATTTTTC+CGG - chr2_1:42297240-42297259 None:intergenic 25.0%
! TTTCTGTTATCAAACAAACT+TGG - chr2_1:42297284-42297303 None:intergenic 25.0%
!!! TTATTTTATAGCCGGAAAAA+TGG + chr2_1:42297355-42297374 Msa0208070:intron 25.0%
! TTTCTGTTATCAAACAAACT+TGG - chr2_1:42297284-42297303 None:intergenic 25.0%
! TCAATGAAGTAAAGTTTATC+TGG - chr2_1:42297621-42297640 None:intergenic 25.0%
! GATATTGTTCGTTCATATTT+GGG - chr2_1:42297848-42297867 None:intergenic 25.0%
! TGATATTGTTCGTTCATATT+TGG - chr2_1:42297849-42297868 None:intergenic 25.0%
!!! TTTATTTTGACTTTTGGGTA+TGG + chr2_1:42298114-42298133 Msa0208070:intron 25.0%
!!! TTATTTTGACTTTTGGGTAT+GGG + chr2_1:42298115-42298134 Msa0208070:intron 25.0%
! TGATACTTGGAAAATTTACT+TGG + chr2_1:42298214-42298233 Msa0208070:intron 25.0%
! TAAGACTTTACAATTCGAAT+CGG - chr2_1:42298275-42298294 None:intergenic 25.0%
!! AATCTTTTACGATTCAAATC+GGG - chr2_1:42298373-42298392 None:intergenic 25.0%
! TCATTTGGAAATTAAACAGA+AGG - chr2_1:42298484-42298503 None:intergenic 25.0%
!! AGTATTTCAAGTGTGATTTA+AGG + chr2_1:42298541-42298560 Msa0208070:intron 25.0%
!! AAGGTTTTCTTTCTTTGATT+CGG + chr2_1:42298560-42298579 Msa0208070:intron 25.0%
!!! CACACATATTTTTGAAAACT+CGG + chr2_1:42298628-42298647 Msa0208070:intron 25.0%
! TCTTAAAACTTTGTATGTTG+AGG + chr2_1:42298918-42298937 Msa0208070:CDS 25.0%
! CCAAGATAATCAAATTCTAT+TGG - chr2_1:42299099-42299118 None:intergenic 25.0%
! CCAATAGAATTTGATTATCT+TGG + chr2_1:42299096-42299115 Msa0208070:CDS 25.0%
! ACATTTAACTACATGAATCA+GGG - chr2_1:42299262-42299281 None:intergenic 25.0%
! AACATTTAACTACATGAATC+AGG - chr2_1:42299263-42299282 None:intergenic 25.0%
! TGGATTACAATACAACAATA+AGG - chr2_1:42299390-42299409 None:intergenic 25.0%
! GTATTGTAATCCAGAAAATT+AGG + chr2_1:42299397-42299416 Msa0208070:three_prime_UTR 25.0%
!!! TTCAGATGACATAATTTGTT+CGG + chr2_1:42299506-42299525 Msa0208070:three_prime_UTR 25.0%
AAAGGAGAATGGTGTTTATT+CGG - chr2_1:42288622-42288641 None:intergenic 30.0%
ATGTTTGTGAGAATGAGAAA+AGG - chr2_1:42288640-42288659 None:intergenic 30.0%
TGTATATAAAATTACCCGCA+CGG + chr2_1:42288982-42289001 Msa0208070:intron 30.0%
!!! ATCTAACTGGTTTTTTTCCT+CGG - chr2_1:42289037-42289056 None:intergenic 30.0%
!!! CATTTCCCTTTTTTTAAACC+GGG - chr2_1:42289093-42289112 None:intergenic 30.0%
! AAAGTTGAGAAAATTTCTGG+AGG + chr2_1:42289465-42289484 Msa0208070:CDS 30.0%
! AATTAAGCTGGCAATTTTTC+TGG - chr2_1:42289554-42289573 None:intergenic 30.0%
AATAACATCACAAAATACCC+AGG - chr2_1:42289593-42289612 None:intergenic 30.0%
TGAAGGTTTCAGTTAAACAA+GGG + chr2_1:42289710-42289729 Msa0208070:CDS 30.0%
! TTGCCTGTGGTAATATTTTT+CGG + chr2_1:42289919-42289938 Msa0208070:intron 30.0%
ATTCCGAAAAATATTACCAC+AGG - chr2_1:42289925-42289944 None:intergenic 30.0%
AATACAGATTCACTCAAAAG+GGG - chr2_1:42290003-42290022 None:intergenic 30.0%
CTAATACAGATTCACTCAAA+AGG - chr2_1:42290005-42290024 None:intergenic 30.0%
!! CTTTTGAGTGAATCTGTATT+AGG + chr2_1:42290003-42290022 Msa0208070:intron 30.0%
! TTCTGCTACTTCAAAAAGAA+GGG - chr2_1:42290305-42290324 None:intergenic 30.0%
! TTTCTGCTACTTCAAAAAGA+AGG - chr2_1:42290306-42290325 None:intergenic 30.0%
TTATTGTGCTTCTAAGTTAG+AGG + chr2_1:42290341-42290360 Msa0208070:intron 30.0%
GACCTTATTAAAGCATATTC+AGG - chr2_1:42290482-42290501 None:intergenic 30.0%
!! ACCATTTTTCATTTGATCAG+AGG + chr2_1:42290661-42290680 Msa0208070:intron 30.0%
TCCTCTGATCAAATGAAAAA+TGG - chr2_1:42290665-42290684 None:intergenic 30.0%
! GAGGAAAATATGAGTTCTAA+TGG + chr2_1:42290680-42290699 Msa0208070:intron 30.0%
! ATTTTCAGCTCAAATGACAA+AGG + chr2_1:42290948-42290967 Msa0208070:intron 30.0%
!!! TTTGTTAGATTGCGCTTTTT+TGG + chr2_1:42290981-42291000 Msa0208070:intron 30.0%
ATGCAGCATATCTATTATCT+AGG + chr2_1:42291099-42291118 Msa0208070:intron 30.0%
TGCAGCATATCTATTATCTA+GGG + chr2_1:42291100-42291119 Msa0208070:intron 30.0%
GATTTCAATTTATACCCAGT+TGG + chr2_1:42291197-42291216 Msa0208070:intron 30.0%
TGTTATGAGAAAAGACTACA+AGG - chr2_1:42291311-42291330 None:intergenic 30.0%
TAGCATAAACATGATCTACA+TGG - chr2_1:42291419-42291438 None:intergenic 30.0%
!! CTTTGGTATTTTATTTGCAG+TGG - chr2_1:42291547-42291566 None:intergenic 30.0%
TATAATGTTGTCATGCATTG+AGG + chr2_1:42291605-42291624 Msa0208070:intron 30.0%
AAACTGGAAATGCAAAATAC+AGG - chr2_1:42291717-42291736 None:intergenic 30.0%
!! AAATGGATTAGAAAATAGGG+TGG - chr2_1:42291774-42291793 None:intergenic 30.0%
! TAATTAGGTTGTCATTCTAC+AGG - chr2_1:42291928-42291947 None:intergenic 30.0%
GCATTCAGGAAACATTAATT+AGG - chr2_1:42291943-42291962 None:intergenic 30.0%
! GTGAAATTTTTGCAGTTGTT+TGG - chr2_1:42292015-42292034 None:intergenic 30.0%
CAGATATCATTCCATAATTG+GGG - chr2_1:42292065-42292084 None:intergenic 30.0%
CCAGATATCATTCCATAATT+GGG - chr2_1:42292066-42292085 None:intergenic 30.0%
TCCAGATATCATTCCATAAT+TGG - chr2_1:42292067-42292086 None:intergenic 30.0%
!!! ATCTGGAAGTTTTTTGAGAA+AGG + chr2_1:42292080-42292099 Msa0208070:CDS 30.0%
! TCTCTCAAATTTGAAATCAG+GGG - chr2_1:42292286-42292305 None:intergenic 30.0%
!! ATGATTTGTTATCCTATGTG+AGG + chr2_1:42292325-42292344 Msa0208070:intron 30.0%
AGATGAATTCTAAGCCAATT+AGG - chr2_1:42292369-42292388 None:intergenic 30.0%
! TAATGTCCCCATATTTTTCT+TGG + chr2_1:42292392-42292411 Msa0208070:intron 30.0%
TGACAAAAGAAAATTGCACA+AGG - chr2_1:42292504-42292523 None:intergenic 30.0%
ATTACAAAACCACCCTTAAA+CGG + chr2_1:42292835-42292854 Msa0208070:intron 30.0%
CCATTACTTTAAACCGTTTA+AGG - chr2_1:42292851-42292870 None:intergenic 30.0%
! CCTTAAACGGTTTAAAGTAA+TGG + chr2_1:42292848-42292867 Msa0208070:intron 30.0%
AAGTTTCTCATGAGTTGTTT+GGG - chr2_1:42293141-42293160 None:intergenic 30.0%
AAAGTTTCTCATGAGTTGTT+TGG - chr2_1:42293142-42293161 None:intergenic 30.0%
ATATATGATAGGAACCTGAA+AGG - chr2_1:42293332-42293351 None:intergenic 30.0%
TTACAAGACAGTTTCATTCA+AGG + chr2_1:42293451-42293470 Msa0208070:CDS 30.0%
ATAAGAAAAGAATAAGCACC+TGG - chr2_1:42293502-42293521 None:intergenic 30.0%
ATTCGAACTACATTAAGACT+GGG + chr2_1:42293688-42293707 Msa0208070:intron 30.0%
TTCTAACTAGTATGTCATAG+AGG + chr2_1:42293804-42293823 Msa0208070:intron 30.0%
! AAATTAAGGTGGTGTCAAAA+TGG + chr2_1:42293945-42293964 Msa0208070:intron 30.0%
! AATTAAGGTGGTGTCAAAAT+GGG + chr2_1:42293946-42293965 Msa0208070:intron 30.0%
AAATAGGTTAAGAGAGAGAT+TGG + chr2_1:42294064-42294083 Msa0208070:intron 30.0%
!! TGCTCTTTAGAATGAATTCA+AGG - chr2_1:42294422-42294441 None:intergenic 30.0%
!!! GGTTTTTTGATTGAGAGTTT+AGG + chr2_1:42295369-42295388 Msa0208070:intron 30.0%
!! TGAATTGATTTGAGCTTCTT+TGG + chr2_1:42295430-42295449 Msa0208070:intron 30.0%
!! TAGAATTTCTAGCTGGTAAT+CGG - chr2_1:42295552-42295571 None:intergenic 30.0%
!! TCAATATACAGAAAGTGTTG+GGG - chr2_1:42295761-42295780 None:intergenic 30.0%
ATTGAAATGTCCATTAAGCT+CGG + chr2_1:42295780-42295799 Msa0208070:intron 30.0%
TGACAACTATAAATAGATGG+TGG - chr2_1:42296022-42296041 None:intergenic 30.0%
AAATGTGAAAGTTTGATTGC+AGG + chr2_1:42296249-42296268 Msa0208070:intron 30.0%
! CATGACTCTTTCTTCTTTTT+GGG - chr2_1:42296336-42296355 None:intergenic 30.0%
! ACATGACTCTTTCTTCTTTT+TGG - chr2_1:42296337-42296356 None:intergenic 30.0%
TGATAGATCTACTTCATGAA+TGG - chr2_1:42296429-42296448 None:intergenic 30.0%
GGTAGTTTATGAATAAGCTT+TGG + chr2_1:42296515-42296534 Msa0208070:intron 30.0%
!! CTTTAAAATGGATGAAGTAG+TGG + chr2_1:42296544-42296563 Msa0208070:intron 30.0%
TAAAATATACAGCAACAAGG+TGG - chr2_1:42296762-42296781 None:intergenic 30.0%
GTGAGCAAGTTAAAATGTAA+TGG + chr2_1:42297069-42297088 Msa0208070:intron 30.0%
TAACTCGTCAACATTGAAAA+TGG - chr2_1:42297209-42297228 None:intergenic 30.0%
TTAACTTATAGCCGGAAAAA+TGG + chr2_1:42297226-42297245 Msa0208070:intron 30.0%
TAACTCGTCAACATTGAAAA+TGG - chr2_1:42297209-42297228 None:intergenic 30.0%
!! TTGACGAGTTATTTTATAGC+CGG + chr2_1:42297347-42297366 Msa0208070:intron 30.0%
!! TCTAGTATAGTCCATTTTTC+CGG - chr2_1:42297369-42297388 None:intergenic 30.0%
GCAAGCATAAATAACTTACA+AGG - chr2_1:42297727-42297746 None:intergenic 30.0%
ACGAACAATATCATTTCTTC+AGG + chr2_1:42297856-42297875 Msa0208070:CDS 30.0%
AGGTAATAATCACAGTGAAA+GGG + chr2_1:42297907-42297926 Msa0208070:intron 30.0%
! ACTATATGGATCTCGTTTTA+CGG - chr2_1:42297984-42298003 None:intergenic 30.0%
TCCATATAGTCTATCAACTA+TGG + chr2_1:42297994-42298013 Msa0208070:intron 30.0%
AAGACTTTACAATTCGAATC+GGG - chr2_1:42298274-42298293 None:intergenic 30.0%
! ATCTTGCGATTTAGTGATTT+TGG + chr2_1:42298442-42298461 Msa0208070:intron 30.0%
CAAAGAAATATCAATAGCCA+TGG - chr2_1:42299052-42299071 None:intergenic 30.0%
TCTACTCATTCCTTTCTAAA+AGG - chr2_1:42299191-42299210 None:intergenic 30.0%
AGATAGTTTCTACTTCATCA+AGG + chr2_1:42299210-42299229 Msa0208070:three_prime_UTR 30.0%
! GATTTGAAAGCCTAATTTTC+TGG - chr2_1:42299410-42299429 None:intergenic 30.0%
CATTCTTTCTAGATGTATTG+TGG + chr2_1:42299437-42299456 Msa0208070:three_prime_UTR 30.0%
CCTATTCTGTCTTTCGAATT+GGG - chr2_1:42288594-42288613 None:intergenic 35.0%
TCCTATTCTGTCTTTCGAAT+TGG - chr2_1:42288595-42288614 None:intergenic 35.0%
TGAGAATGAGAAAAGGAGAA+TGG - chr2_1:42288633-42288652 None:intergenic 35.0%
GTGCAGGAAGAAAAGAAAAA+GGG - chr2_1:42288936-42288955 None:intergenic 35.0%
AGTGCAGGAAGAAAAGAAAA+AGG - chr2_1:42288937-42288956 None:intergenic 35.0%
! AAATTTGCAAAAGGAAGTGC+AGG - chr2_1:42288952-42288971 None:intergenic 35.0%
! TGAATGCAGTAATTTGTGCA+AGG + chr2_1:42289401-42289420 Msa0208070:intron 35.0%
! ATCAACTAGTTTGAGGTCAT+TGG - chr2_1:42289660-42289679 None:intergenic 35.0%
CTGAAGGTTTCAGTTAAACA+AGG + chr2_1:42289709-42289728 Msa0208070:CDS 35.0%
GAAGGTTTCAGTTAAACAAG+GGG + chr2_1:42289711-42289730 Msa0208070:CDS 35.0%
AAAGCGATCAATGATATGCT+CGG - chr2_1:42289782-42289801 None:intergenic 35.0%
AAAAGGGGGCAAAAAATATG+GGG - chr2_1:42289988-42290007 None:intergenic 35.0%
CAAAAGGGGGCAAAAAATAT+GGG - chr2_1:42289989-42290008 None:intergenic 35.0%
TCAAAAGGGGGCAAAAAATA+TGG - chr2_1:42289990-42290009 None:intergenic 35.0%
ATACAGATTCACTCAAAAGG+GGG - chr2_1:42290002-42290021 None:intergenic 35.0%
!! TTTTATTGATGGCCCTATTG+AGG + chr2_1:42290046-42290065 Msa0208070:intron 35.0%
! TTTATTGATGGCCCTATTGA+GGG + chr2_1:42290047-42290066 Msa0208070:intron 35.0%
TTTAGGCCTCCTTCATATAT+GGG + chr2_1:42290221-42290240 Msa0208070:intron 35.0%
! TCTGCTACTTCAAAAAGAAG+GGG - chr2_1:42290304-42290323 None:intergenic 35.0%
TCTTGAACTAAGTCTTGCAA+TGG + chr2_1:42290718-42290737 Msa0208070:intron 35.0%
CTTGAACTAAGTCTTGCAAT+GGG + chr2_1:42290719-42290738 Msa0208070:intron 35.0%
TTGCTTGTGAAATGGTGTTT+AGG + chr2_1:42290801-42290820 Msa0208070:intron 35.0%
! TGGCTTGGAATATTTGGAAA+TGG + chr2_1:42290862-42290881 Msa0208070:CDS 35.0%
CCATACGTACAATGCAATAT+TGG - chr2_1:42291062-42291081 None:intergenic 35.0%
CCAATATTGCATTGTACGTA+TGG + chr2_1:42291059-42291078 Msa0208070:intron 35.0%
!!! TCGATTCAGAAGGGTATTTT+CGG - chr2_1:42291179-42291198 None:intergenic 35.0%
TGAGAAAAGACTACAAGGTT+GGG - chr2_1:42291306-42291325 None:intergenic 35.0%
ATGAGAAAAGACTACAAGGT+TGG - chr2_1:42291307-42291326 None:intergenic 35.0%
!! AAAATTGGTTTGAGGAGTAG+TGG + chr2_1:42291447-42291466 Msa0208070:intron 35.0%
!! AAATTGGTTTGAGGAGTAGT+GGG + chr2_1:42291448-42291467 Msa0208070:intron 35.0%
! ACAGATGAATTGAAGAGCAT+TGG + chr2_1:42291514-42291533 Msa0208070:intron 35.0%
TTTCAACGAACCACTTTCTT+TGG - chr2_1:42291564-42291583 None:intergenic 35.0%
GAAAGTGGTTCGTTGAAATT+TGG + chr2_1:42291566-42291585 Msa0208070:intron 35.0%
GTTGAAATTTGGAAGAGACT+CGG + chr2_1:42291577-42291596 Msa0208070:intron 35.0%
! TGAGTAGGATGGAATAGTTT+TGG + chr2_1:42291649-42291668 Msa0208070:intron 35.0%
CAAGATAAACGGAATTATGC+AGG - chr2_1:42291691-42291710 None:intergenic 35.0%
! TTGCATTTCCAGTTTTACAG+AGG + chr2_1:42291722-42291741 Msa0208070:intron 35.0%
! TGCATTTCCAGTTTTACAGA+GGG + chr2_1:42291723-42291742 Msa0208070:intron 35.0%
! TTGCAGTTGTTTGGCTATTT+TGG - chr2_1:42292006-42292025 None:intergenic 35.0%
CCCAATTATGGAATGATATC+TGG + chr2_1:42292063-42292082 Msa0208070:CDS 35.0%
AAAATTGAGGCAAAGCTGAA+GGG - chr2_1:42292256-42292275 None:intergenic 35.0%
TAAAATTGAGGCAAAGCTGA+AGG - chr2_1:42292257-42292276 None:intergenic 35.0%
GACCTTCCAAGAAAAATATG+GGG - chr2_1:42292401-42292420 None:intergenic 35.0%
GGACCTTCCAAGAAAAATAT+GGG - chr2_1:42292402-42292421 None:intergenic 35.0%
AGGACCTTCCAAGAAAAATA+TGG - chr2_1:42292403-42292422 None:intergenic 35.0%
GAGCAAGAATAACAAATGCA+AGG - chr2_1:42292423-42292442 None:intergenic 35.0%
ATACTGATCAAGTACTTTGC+AGG - chr2_1:42292452-42292471 None:intergenic 35.0%
AATGATCTCTGTTGTCAAAG+CGG + chr2_1:42292633-42292652 Msa0208070:intron 35.0%
TACTTTAAACCGTTTAAGGG+TGG - chr2_1:42292847-42292866 None:intergenic 35.0%
ATTTCCTCTGTTGTCAATAG+CGG - chr2_1:42293055-42293074 None:intergenic 35.0%
TCAATGGGGTTATAAAAGAC+AGG - chr2_1:42293190-42293209 None:intergenic 35.0%
! CATTGATAGTCATGTCAATG+GGG - chr2_1:42293204-42293223 None:intergenic 35.0%
! GCATTGATAGTCATGTCAAT+GGG - chr2_1:42293205-42293224 None:intergenic 35.0%
CACTAATTGTCATGTGAATG+GGG - chr2_1:42293262-42293281 None:intergenic 35.0%
GCACTAATTGTCATGTGAAT+GGG - chr2_1:42293263-42293282 None:intergenic 35.0%
TGATGAAATTTATGAGCTCC+AGG + chr2_1:42293481-42293500 Msa0208070:CDS 35.0%
!! AGTTTTCACACTTGGTGAAT+AGG - chr2_1:42293603-42293622 None:intergenic 35.0%
CATTCGAACTACATTAAGAC+TGG + chr2_1:42293687-42293706 Msa0208070:intron 35.0%
TTCGAACTACATTAAGACTG+GGG + chr2_1:42293689-42293708 Msa0208070:intron 35.0%
! CTTGGTAATTCCATTCATCA+GGG - chr2_1:42293730-42293749 None:intergenic 35.0%
! ACTTGGTAATTCCATTCATC+AGG - chr2_1:42293731-42293750 None:intergenic 35.0%
CTATCCTTGTCTTCATTCTA+AGG - chr2_1:42293757-42293776 None:intergenic 35.0%
GCGTAAATCTTTCTTTGTAC+AGG - chr2_1:42293835-42293854 None:intergenic 35.0%
! GATGGCATTGAATGTTGTAA+TGG + chr2_1:42294092-42294111 Msa0208070:intron 35.0%
AACAAAATTAAGGTGGTGTC+CGG - chr2_1:42294227-42294246 None:intergenic 35.0%
GTGCAAATCTTTCTTTGTAC+AGG + chr2_1:42294335-42294354 Msa0208070:intron 35.0%
!! GCTAAAAAATGGTGTCATGA+GGG - chr2_1:42294693-42294712 None:intergenic 35.0%
!! TGCTAAAAAATGGTGTCATG+AGG - chr2_1:42294694-42294713 None:intergenic 35.0%
ACTTTGTGATGTCTATGTGT+TGG - chr2_1:42294810-42294829 None:intergenic 35.0%
AAATAGGCTACAAATAGTCG+TGG - chr2_1:42294861-42294880 None:intergenic 35.0%
TTTGAGCTTCTTTGGCATAA+TGG + chr2_1:42295438-42295457 Msa0208070:intron 35.0%
!! ATCAGTCTAGAATTTCTAGC+TGG - chr2_1:42295559-42295578 None:intergenic 35.0%
TTGAAATGTCCATTAAGCTC+GGG + chr2_1:42295781-42295800 Msa0208070:intron 35.0%
ATGTAAATTCCCGAGCTTAA+TGG - chr2_1:42295793-42295812 None:intergenic 35.0%
TTCCTAGGCAATCAATCAAT+AGG + chr2_1:42295836-42295855 Msa0208070:intron 35.0%
TCAATCTGAACTTTCTTTCC+CGG - chr2_1:42295891-42295910 None:intergenic 35.0%
TTTCTGTGCATGTAGACATA+AGG - chr2_1:42296138-42296157 None:intergenic 35.0%
AAGACGAAACTGGAAAAGAA+GGG - chr2_1:42296489-42296508 None:intergenic 35.0%
AAAGACGAAACTGGAAAAGA+AGG - chr2_1:42296490-42296509 None:intergenic 35.0%
CAATAACATCAACACAGTCT+AGG - chr2_1:42296988-42297007 None:intergenic 35.0%
GAGTACAAAAGTCACCTTAA+AGG + chr2_1:42297155-42297174 Msa0208070:intron 35.0%
ACAAAAGTCACCTTAAAGGT+AGG + chr2_1:42297159-42297178 Msa0208070:intron 35.0%
CAAAAGTCACCTTAAAGGTA+GGG + chr2_1:42297160-42297179 Msa0208070:intron 35.0%
TTGACGAGTTAACTTATAGC+CGG + chr2_1:42297218-42297237 Msa0208070:intron 35.0%
!! ACAAACACACTTCTGGAATA+TGG + chr2_1:42297481-42297500 Msa0208070:intron 35.0%
!! CAAACACACTTCTGGAATAT+GGG + chr2_1:42297482-42297501 Msa0208070:intron 35.0%
!! AAACACACTTCTGGAATATG+GGG + chr2_1:42297483-42297502 Msa0208070:intron 35.0%
TATGCATCATACAACTACAG+AGG + chr2_1:42297648-42297667 Msa0208070:CDS 35.0%
AATCACTTTGCAGAATATGC+TGG + chr2_1:42297684-42297703 Msa0208070:CDS 35.0%
!! CTTGCTTTTCTTGCTTTACT+CGG + chr2_1:42297742-42297761 Msa0208070:intron 35.0%
ACTGTGATTATTACCTCTTG+AGG - chr2_1:42297903-42297922 None:intergenic 35.0%
GAGGTAATAATCACAGTGAA+AGG + chr2_1:42297906-42297925 Msa0208070:intron 35.0%
! TTTACGGATGCTTGATAATC+TGG - chr2_1:42297968-42297987 None:intergenic 35.0%
!! GCCATAGTTGATAGACTATA+TGG - chr2_1:42297998-42298017 None:intergenic 35.0%
GACAGAAAAGATGATGATCA+TGG - chr2_1:42298020-42298039 None:intergenic 35.0%
TACAAATGCTAACACTGAAG+TGG - chr2_1:42298085-42298104 None:intergenic 35.0%
! ATTTGAGATTAATCCCTGAC+AGG - chr2_1:42298194-42298213 None:intergenic 35.0%
TGGAAAATTTACTTGGCTAG+TGG + chr2_1:42298221-42298240 Msa0208070:intron 35.0%
AAAATTTACTTGGCTAGTGG+TGG + chr2_1:42298224-42298243 Msa0208070:intron 35.0%
TTTACAATTCGAATCGGGAT+TGG - chr2_1:42298269-42298288 None:intergenic 35.0%
CCACCCTATTCTACAAAAAT+AGG - chr2_1:42298347-42298366 None:intergenic 35.0%
!!! CCTATTTTTGTAGAATAGGG+TGG + chr2_1:42298344-42298363 Msa0208070:intron 35.0%
TGTGTACTCTTAATCGATGA+AGG - chr2_1:42298417-42298436 None:intergenic 35.0%
! CATGAGAGTTTGAAGTCATT+TGG - chr2_1:42298499-42298518 None:intergenic 35.0%
ATAATTTACATGCCCTCAAG+TGG - chr2_1:42298803-42298822 None:intergenic 35.0%
CAGACACCTGTATTATGAAT+TGG - chr2_1:42298891-42298910 None:intergenic 35.0%
TGAGGTAAATACATATGCAC+TGG + chr2_1:42298936-42298955 Msa0208070:CDS 35.0%
! TTTTGTACTCGTTGTATCGA+AGG - chr2_1:42299131-42299150 None:intergenic 35.0%
TTCGATACAACGAGTACAAA+AGG + chr2_1:42299130-42299149 Msa0208070:CDS 35.0%
GAAAGAAAAGCTTGTATCGA+TGG + chr2_1:42299155-42299174 Msa0208070:CDS 35.0%
! CTCATTCCTTTCTAAAAGGT+AGG - chr2_1:42299187-42299206 None:intergenic 35.0%
ACTACGATCAAGGCAAATTT+AGG + chr2_1:42299340-42299359 Msa0208070:three_prime_UTR 35.0%
! AGGACTAGTGATCGTATCAT+TGG + chr2_1:42288557-42288576 Msa0208070:five_prime_UTR 40.0%
ATTCTGTCTTTCGAATTGGG+CGG - chr2_1:42288591-42288610 None:intergenic 40.0%
CCCAATTCGAAAGACAGAAT+AGG + chr2_1:42288591-42288610 Msa0208070:five_prime_UTR 40.0%
AATCGATGAGAAAGGTTCAG+AGG - chr2_1:42288736-42288755 None:intergenic 40.0%
TGGGTGGAAAAGTTAAGATC+TGG + chr2_1:42288776-42288795 Msa0208070:CDS 40.0%
! AGCTTGTTCTGCGATTTCAA+CGG - chr2_1:42288806-42288825 None:intergenic 40.0%
TTGAAATCGCAGAACAAGCT+CGG + chr2_1:42288806-42288825 Msa0208070:CDS 40.0%
AAGGGAAAGAGAAGGATCAA+TGG - chr2_1:42288869-42288888 None:intergenic 40.0%
ATTTGAGGAAGGGAAAGAGA+AGG - chr2_1:42288877-42288896 None:intergenic 40.0%
TGATAACATGACTTTCTCCG+AGG + chr2_1:42289017-42289036 Msa0208070:intron 40.0%
!!! CCTTTTTTTAAACCGGGACT+GGG - chr2_1:42289087-42289106 None:intergenic 40.0%
CCAGTCCCGGTTTAAAAAAA+GGG + chr2_1:42289085-42289104 Msa0208070:intron 40.0%
! TTTAAGGTCTAACCAATGCC+CGG - chr2_1:42289128-42289147 None:intergenic 40.0%
! CTTGAGAATTAGTCTCGTAG+CGG + chr2_1:42289172-42289191 Msa0208070:intron 40.0%
TTCAAGACCTGGTCAAGTTT+AGG + chr2_1:42289429-42289448 Msa0208070:CDS 40.0%
AGAATCACCTAAACTTGACC+AGG - chr2_1:42289439-42289458 None:intergenic 40.0%
!! TCAATGATATGCTCGGTGTT+GGG - chr2_1:42289775-42289794 None:intergenic 40.0%
!! ATCAATGATATGCTCGGTGT+TGG - chr2_1:42289776-42289795 None:intergenic 40.0%
!!! GATTTTGTTTCTGTTGCCTG+TGG + chr2_1:42289906-42289925 Msa0208070:intron 40.0%
AAACAACAAAAGTGGGGCTA+GGG - chr2_1:42290029-42290048 None:intergenic 40.0%
AAAACAACAAAAGTGGGGCT+AGG - chr2_1:42290030-42290049 None:intergenic 40.0%
ATATGAAGGAGGCCTAAAGT+TGG - chr2_1:42290219-42290238 None:intergenic 40.0%
CTTTAGGCCTCCTTCATATA+TGG + chr2_1:42290220-42290239 Msa0208070:intron 40.0%
TTAGGCCTCCTTCATATATG+GGG + chr2_1:42290222-42290241 Msa0208070:intron 40.0%
ATTGTAGGCCCCATATATGA+AGG - chr2_1:42290233-42290252 None:intergenic 40.0%
! ATATGGGGCCTACAATTTTG+CGG + chr2_1:42290237-42290256 Msa0208070:intron 40.0%
TCCATAAGCCGCAAAATTGT+AGG - chr2_1:42290248-42290267 None:intergenic 40.0%
! TTTTGCGGCTTATGGAAAAG+AGG + chr2_1:42290252-42290271 Msa0208070:intron 40.0%
TTTGCGGCTTATGGAAAAGA+GGG + chr2_1:42290253-42290272 Msa0208070:intron 40.0%
! CTGCTACTTCAAAAAGAAGG+GGG - chr2_1:42290303-42290322 None:intergenic 40.0%
TGCAGCAGTGATGTATTTGA+TGG - chr2_1:42290827-42290846 None:intergenic 40.0%
ATCAAATACATCACTGCTGC+AGG + chr2_1:42290826-42290845 Msa0208070:CDS 40.0%
! GCTAAGTGGCTTGGAATATT+TGG + chr2_1:42290856-42290875 Msa0208070:CDS 40.0%
!! GCGTTCTAAAGTTAAGATCC+AGG - chr2_1:42291225-42291244 None:intergenic 40.0%
AGGAATTTACCTCAGGACTA+TGG - chr2_1:42291247-42291266 None:intergenic 40.0%
TCCTGAGGTAAATTCCTTAC+TGG + chr2_1:42291250-42291269 Msa0208070:intron 40.0%
TCCAGTAAGGAATTTACCTC+AGG - chr2_1:42291254-42291273 None:intergenic 40.0%
GAGAAAAGACTACAAGGTTG+GGG - chr2_1:42291305-42291324 None:intergenic 40.0%
AAATTTGGAAGAGACTCGGA+AGG + chr2_1:42291581-42291600 Msa0208070:intron 40.0%
TGTGTGTGAGAACTTGGAAA+TGG - chr2_1:42291791-42291810 None:intergenic 40.0%
AGATATGCGAGAACCAAAAC+TGG + chr2_1:42291977-42291996 Msa0208070:intron 40.0%
!!! GCTATTTTGGCAACCAGTTT+TGG - chr2_1:42291993-42292012 None:intergenic 40.0%
ACTGCAAAAATTTCACGGTG+TGG + chr2_1:42292019-42292038 Msa0208070:CDS 40.0%
! GATTTGTGTCGATGAGTTGT+AGG + chr2_1:42292194-42292213 Msa0208070:intron 40.0%
GGATTTCAGCTATGTTTCGT+AGG + chr2_1:42292215-42292234 Msa0208070:intron 40.0%
ATCCTATGTGAGGATTCTCT+TGG + chr2_1:42292335-42292354 Msa0208070:intron 40.0%
TCCTATGTGAGGATTCTCTT+GGG + chr2_1:42292336-42292355 Msa0208070:intron 40.0%
! GTCCCCATATTTTTCTTGGA+AGG + chr2_1:42292396-42292415 Msa0208070:intron 40.0%
TCAAGTACTTTGCAGGACTA+GGG - chr2_1:42292445-42292464 None:intergenic 40.0%
ATCAAGTACTTTGCAGGACT+AGG - chr2_1:42292446-42292465 None:intergenic 40.0%
!! CGATGGTGGAAAAACTGAAA+AGG + chr2_1:42292609-42292628 Msa0208070:intron 40.0%
TAAAAGACAGGAAAGCCTAG+AGG - chr2_1:42293178-42293197 None:intergenic 40.0%
!! GGCATTGATAGTCATGTCAA+TGG - chr2_1:42293206-42293225 None:intergenic 40.0%
ATCTAAATCATCCATCCACG+TGG - chr2_1:42293227-42293246 None:intergenic 40.0%
TGTGAATGGGGAGAAGAAAA+GGG - chr2_1:42293250-42293269 None:intergenic 40.0%
ATGTGAATGGGGAGAAGAAA+AGG - chr2_1:42293251-42293270 None:intergenic 40.0%
GGCACTAATTGTCATGTGAA+TGG - chr2_1:42293264-42293283 None:intergenic 40.0%
! TGAAAGGTCAAAGTGGATTC+AGG - chr2_1:42293316-42293335 None:intergenic 40.0%
TGAATCCACTTTGACCTTTC+AGG + chr2_1:42293315-42293334 Msa0208070:intron 40.0%
!! GCAGCATCTGTTCTAGAATT+TGG + chr2_1:42293407-42293426 Msa0208070:intron 40.0%
! TCACACTTGGTGAATAGGAT+TGG - chr2_1:42293598-42293617 None:intergenic 40.0%
GTAGAAAGTTCCCTGATGAA+TGG + chr2_1:42293717-42293736 Msa0208070:intron 40.0%
!! TCTTCATTCTAAGGAGCACT+TGG - chr2_1:42293748-42293767 None:intergenic 40.0%
TGCTCCTTAGAATGAAGACA+AGG + chr2_1:42293750-42293769 Msa0208070:intron 40.0%
CCTATTTGCACTATGACTGT+AGG - chr2_1:42294051-42294070 None:intergenic 40.0%
CCTACAGTCATAGTGCAAAT+AGG + chr2_1:42294048-42294067 Msa0208070:intron 40.0%
AGACATGCACACAATTGAGA+AGG + chr2_1:42294149-42294168 Msa0208070:intron 40.0%
ACAAAGTCATGAACCCTTAC+AGG + chr2_1:42295022-42295041 Msa0208070:intron 40.0%
ATCAATGTTGTTGAAAGGGG+TGG + chr2_1:42295279-42295298 Msa0208070:intron 40.0%
AAACTACTTGTCGCTGACAT+AGG - chr2_1:42295329-42295348 None:intergenic 40.0%
TATGTCAGCGACAAGTAGTT+TGG + chr2_1:42295328-42295347 Msa0208070:intron 40.0%
!!! GCATAATGGTTTTGACAACG+TGG + chr2_1:42295452-42295471 Msa0208070:intron 40.0%
CATCCACATTACTTGTAGGA+AGG - chr2_1:42295498-42295517 None:intergenic 40.0%
GACTCATCCACATTACTTGT+AGG - chr2_1:42295502-42295521 None:intergenic 40.0%
!!! AGTCGAGTTTTGTTCCTACT+AGG + chr2_1:42295518-42295537 Msa0208070:intron 40.0%
!! GTTTTGTTCCTACTAGGTTG+TGG + chr2_1:42295524-42295543 Msa0208070:intron 40.0%
AACATAAAACTTGTGACCGC+TGG + chr2_1:42295626-42295645 Msa0208070:intron 40.0%
! GTCCTATTGATTGATTGCCT+AGG - chr2_1:42295841-42295860 None:intergenic 40.0%
CTCAAGTTAATGGGATGAAC+CGG + chr2_1:42295869-42295888 Msa0208070:intron 40.0%
TCAAGTTAATGGGATGAACC+GGG + chr2_1:42295870-42295889 Msa0208070:intron 40.0%
TCCTTTGAATTCCTACCTCA+AGG + chr2_1:42295979-42295998 Msa0208070:intron 40.0%
ACCTTGAGGTAGGAATTCAA+AGG - chr2_1:42295983-42296002 None:intergenic 40.0%
AATACTCACAACCTTGAGGT+AGG - chr2_1:42295993-42296012 None:intergenic 40.0%
AAAGGTTTCTGTGTCAACAC+TGG + chr2_1:42296169-42296188 Msa0208070:intron 40.0%
AGACGAAACTGGAAAAGAAG+GGG - chr2_1:42296488-42296507 None:intergenic 40.0%
TTCCAGTTTCGTCTTTGTGA+TGG + chr2_1:42296494-42296513 Msa0208070:intron 40.0%
TACCATCACAAAGACGAAAC+TGG - chr2_1:42296499-42296518 None:intergenic 40.0%
!! TCTCACAATGACTTGCTTTC+TGG + chr2_1:42296674-42296693 Msa0208070:CDS 40.0%
TCTAGGAAGAAGAATGGCAA+AGG - chr2_1:42296971-42296990 None:intergenic 40.0%
ACACAGTCTAGGAAGAAGAA+TGG - chr2_1:42296977-42296996 None:intergenic 40.0%
ACTAAATGAGTCAGCACATG+CGG + chr2_1:42297025-42297044 Msa0208070:intron 40.0%
TAAGGAGACAAACACACTTC+TGG + chr2_1:42297474-42297493 Msa0208070:intron 40.0%
ATTCTCATGTCCAGAGAGAA+TGG + chr2_1:42297531-42297550 Msa0208070:intron 40.0%
GGTTATCAAACCATTCTCTC+TGG - chr2_1:42297544-42297563 None:intergenic 40.0%
AACTACAGAGGCTATGACAT+AGG + chr2_1:42297660-42297679 Msa0208070:CDS 40.0%
ACTACAGAGGCTATGACATA+GGG + chr2_1:42297661-42297680 Msa0208070:CDS 40.0%
TCTGTCACGCGTGTTTATTT+AGG + chr2_1:42298034-42298053 Msa0208070:intron 40.0%
!!! TTTTGACTTTTGGGTATGGG+AGG + chr2_1:42298118-42298137 Msa0208070:intron 40.0%
!! TTTGACTTTTGGGTATGGGA+GGG + chr2_1:42298119-42298138 Msa0208070:intron 40.0%
ACAAAATTCACTGACCTGTC+AGG + chr2_1:42298177-42298196 Msa0208070:intron 40.0%
CAAAATTCACTGACCTGTCA+GGG + chr2_1:42298178-42298197 Msa0208070:intron 40.0%
TGTGTGCTCTTAATCGTTGA+GGG - chr2_1:42298318-42298337 None:intergenic 40.0%
TTGTGTGCTCTTAATCGTTG+AGG - chr2_1:42298319-42298338 None:intergenic 40.0%
AAAATATGTGTGCGTGTCTG+CGG - chr2_1:42298620-42298639 None:intergenic 40.0%
!! AGCTTTGCTCTGGCTTTAAA+CGG - chr2_1:42298714-42298733 None:intergenic 40.0%
!! CGCTATCCTACCTTTTAGAA+AGG + chr2_1:42299178-42299197 Msa0208070:CDS 40.0%
GCTTGTTCTGCGATTTCAAC+GGG - chr2_1:42288805-42288824 None:intergenic 45.0%
GGATCAATGGAGAGAAGAGA+AGG - chr2_1:42288856-42288875 None:intergenic 45.0%
!! GAGAGGTGTCATTTGAGGAA+GGG - chr2_1:42288887-42288906 None:intergenic 45.0%
!! ATGACGAGAGGTGTCATTTG+AGG - chr2_1:42288892-42288911 None:intergenic 45.0%
AGAGTTACTGACATGACGAG+AGG - chr2_1:42288904-42288923 None:intergenic 45.0%
TAAAATTACCCGCACGGTGT+TGG + chr2_1:42288988-42289007 Msa0208070:intron 45.0%
AAAATTACCCGCACGGTGTT+GGG + chr2_1:42288989-42289008 Msa0208070:intron 45.0%
GATTCCTCGAGTCGTCAATT+TGG + chr2_1:42289054-42289073 Msa0208070:intron 45.0%
CCCAGTCCCGGTTTAAAAAA+AGG + chr2_1:42289084-42289103 Msa0208070:intron 45.0%
!!! CCCTTTTTTTAAACCGGGAC+TGG - chr2_1:42289088-42289107 None:intergenic 45.0%
TTAAGGTCTAACCAATGCCC+GGG - chr2_1:42289127-42289146 None:intergenic 45.0%
AATCCTAGCTTAGGCCACTT+GGG - chr2_1:42289199-42289218 None:intergenic 45.0%
AAATCCTAGCTTAGGCCACT+TGG - chr2_1:42289200-42289219 None:intergenic 45.0%
GACACCAGAAATCCTAGCTT+AGG - chr2_1:42289208-42289227 None:intergenic 45.0%
!! CAATGATATGCTCGGTGTTG+GGG - chr2_1:42289774-42289793 None:intergenic 45.0%
TGATCGCTTTCGAGAATTGC+AGG + chr2_1:42289792-42289811 Msa0208070:CDS 45.0%
CCAAGAGTTGTCCCTCAATA+GGG - chr2_1:42290061-42290080 None:intergenic 45.0%
! GCCTACAATTTTGCGGCTTA+TGG + chr2_1:42290244-42290263 Msa0208070:intron 45.0%
AAGGGGGCCTAAAATACTCA+AGG - chr2_1:42290287-42290306 None:intergenic 45.0%
TACATCACTGCTGCAGGATT+TGG + chr2_1:42290832-42290851 Msa0208070:CDS 45.0%
! GCAGTTTACCACAGCTCTAA+AGG - chr2_1:42291142-42291161 None:intergenic 45.0%
! ATTTATACCCAGTTGGTGCC+TGG + chr2_1:42291204-42291223 Msa0208070:intron 45.0%
TTAAGATCCAGGCACCAACT+GGG - chr2_1:42291214-42291233 None:intergenic 45.0%
! TTTAGAACGCCATAGTCCTG+AGG + chr2_1:42291235-42291254 Msa0208070:intron 45.0%
CGATGCAAGTTCATCCAGTA+AGG - chr2_1:42291267-42291286 None:intergenic 45.0%
!! TAGTGGGTTGGATAGAAGTG+CGG + chr2_1:42291464-42291483 Msa0208070:intron 45.0%
TGTTGTCATGCATTGAGGAG+AGG + chr2_1:42291610-42291629 Msa0208070:intron 45.0%
GTTGTCATGCATTGAGGAGA+GGG + chr2_1:42291611-42291630 Msa0208070:intron 45.0%
AAGGAAGGCAAGGATTGAGT+AGG + chr2_1:42291634-42291653 Msa0208070:intron 45.0%
AAGGCAAGGATTGAGTAGGA+TGG + chr2_1:42291638-42291657 Msa0208070:intron 45.0%
AAAGCTGCCCTCTGTAAAAC+TGG - chr2_1:42291733-42291752 None:intergenic 45.0%
TGTGTGTGTGTGTGAGAACT+TGG - chr2_1:42291797-42291816 None:intergenic 45.0%
! TCCTGAATGCTTTTCCCCAA+TGG + chr2_1:42291953-42291972 Msa0208070:intron 45.0%
TTCTCGCATATCTGCCATTG+GGG - chr2_1:42291970-42291989 None:intergenic 45.0%
GTTCTCGCATATCTGCCATT+GGG - chr2_1:42291971-42291990 None:intergenic 45.0%
TTTCACGGTGTGGAAATTCC+AGG + chr2_1:42292029-42292048 Msa0208070:CDS 45.0%
TGTGGAAATTCCAGGCTCTA+AGG + chr2_1:42292037-42292056 Msa0208070:CDS 45.0%
!! GCTCTAAGGAACCCCAATTA+TGG + chr2_1:42292051-42292070 Msa0208070:CDS 45.0%
!! CAGGGGAAGTGCTAAAATTG+AGG - chr2_1:42292269-42292288 None:intergenic 45.0%
ACCCAAGAGAATCCTCACAT+AGG - chr2_1:42292340-42292359 None:intergenic 45.0%
TATGTGAGGATTCTCTTGGG+TGG + chr2_1:42292339-42292358 Msa0208070:intron 45.0%
TGAGCTTAAGAGCTCTACGA+TGG + chr2_1:42292592-42292611 Msa0208070:intron 45.0%
CTGTTGTCAAAGCGGAAATG+CGG + chr2_1:42292641-42292660 Msa0208070:intron 45.0%
AGCCACCTCAAAAATTGGTG+CGG + chr2_1:42292672-42292691 Msa0208070:intron 45.0%
CGTATTCAATGCTGCCAAAG+CGG - chr2_1:42292914-42292933 None:intergenic 45.0%
AGCGTGTCGTATGTGAATAG+TGG - chr2_1:42292968-42292987 None:intergenic 45.0%
TCTAGGAGCTTATCTCTGGT+AGG - chr2_1:42293101-42293120 None:intergenic 45.0%
AGAGAAGTTCTCTCTGGTCT+AGG - chr2_1:42293118-42293137 None:intergenic 45.0%
TTTGGGAGAGAAGTTCTCTC+TGG - chr2_1:42293124-42293143 None:intergenic 45.0%
TTCTGAATGCCTCATCCTCT+AGG + chr2_1:42293160-42293179 Msa0208070:intron 45.0%
ACATGACTATCAATGCCACG+TGG + chr2_1:42293209-42293228 Msa0208070:intron 45.0%
! GGTCAAAGTGGATTCAGGAA+TGG - chr2_1:42293311-42293330 None:intergenic 45.0%
AGGAACCTGAAAGGTCAAAG+TGG - chr2_1:42293323-42293342 None:intergenic 45.0%
CTACATTAAGACTGGGGCTA+AGG + chr2_1:42293695-42293714 Msa0208070:intron 45.0%
! ACAAGTAGTTTGGTGGAGGA+AGG + chr2_1:42295338-42295357 Msa0208070:intron 45.0%
! TTTGGTGGAGGAAGGTTTTG+TGG + chr2_1:42295346-42295365 Msa0208070:intron 45.0%
!! TTGGTGGAGGAAGGTTTTGT+GGG + chr2_1:42295347-42295366 Msa0208070:intron 45.0%
GAGCCTTCCTACAAGTAATG+TGG + chr2_1:42295492-42295511 Msa0208070:intron 45.0%
AATCGGAACCACAACCTAGT+AGG - chr2_1:42295535-42295554 None:intergenic 45.0%
GCTGAATACTCACAACCTTG+AGG - chr2_1:42295997-42296016 None:intergenic 45.0%
AAACAGACTTCATGGTGCAC+AGG - chr2_1:42296085-42296104 None:intergenic 45.0%
CGGCTTGAAAACAGACTTCA+TGG - chr2_1:42296093-42296112 None:intergenic 45.0%
AGCTAGCAAGTGCGTAAACA+CGG - chr2_1:42296113-42296132 None:intergenic 45.0%
ACAGAAAGTAGCCACAGGAA+AGG + chr2_1:42296151-42296170 Msa0208070:intron 45.0%
TGACACAGAAACCTTTCCTG+TGG - chr2_1:42296165-42296184 None:intergenic 45.0%
GAGACAGAGAAGACAGCAAA+TGG - chr2_1:42296208-42296227 None:intergenic 45.0%
ATCTATCATGCCCAAGTGTC+AGG + chr2_1:42296441-42296460 Msa0208070:intron 45.0%
TATCCCTAAGCCTGACACTT+GGG - chr2_1:42296454-42296473 None:intergenic 45.0%
ATATCCCTAAGCCTGACACT+TGG - chr2_1:42296455-42296474 None:intergenic 45.0%
AGCTCATGACCCTACCTTTA+AGG - chr2_1:42297172-42297191 None:intergenic 45.0%
TAAAGGTAGGGTCATGAGCT+TGG + chr2_1:42297172-42297191 Msa0208070:intron 45.0%
!! CTTCTGGAATATGGGGCATT+TGG + chr2_1:42297490-42297509 Msa0208070:intron 45.0%
ATTACCTCTTGAGGTCTGTC+TGG - chr2_1:42297894-42297913 None:intergenic 45.0%
!! TTGACTTTTGGGTATGGGAG+GGG + chr2_1:42298120-42298139 Msa0208070:intron 45.0%
! CAATTCGAATCGGGATTGGT+AGG - chr2_1:42298265-42298284 None:intergenic 45.0%
AAATATGTGTGCGTGTCTGC+GGG - chr2_1:42298619-42298638 None:intergenic 45.0%
! CCTCAGATTAGTCGTTCCTT+GGG - chr2_1:42298661-42298680 None:intergenic 45.0%
CCAAGGAACGACTAATCTGA+GGG + chr2_1:42298659-42298678 Msa0208070:intron 45.0%
CAAGGAACGACTAATCTGAG+GGG + chr2_1:42298660-42298679 Msa0208070:intron 45.0%
CCAATTCCACCATCCATTTG+CGG + chr2_1:42298684-42298703 Msa0208070:intron 45.0%
CAATTCCACCATCCATTTGC+GGG + chr2_1:42298685-42298704 Msa0208070:intron 45.0%
AATTCCACCATCCATTTGCG+GGG + chr2_1:42298686-42298705 Msa0208070:intron 45.0%
!! CTTTGCTCTGGCTTTAAACG+GGG - chr2_1:42298712-42298731 None:intergenic 45.0%
!! GCTTTGCTCTGGCTTTAAAC+GGG - chr2_1:42298713-42298732 None:intergenic 45.0%
!!! GTCTCAGTTTTGATTCCCAC+CGG - chr2_1:42298766-42298785 None:intergenic 45.0%
!! ACACCTTTTCTGGTCTCTGT+GGG + chr2_1:42298963-42298982 Msa0208070:CDS 45.0%
!! TAGGCCTTTAGTTTGAGCTC+TGG + chr2_1:42299359-42299378 Msa0208070:three_prime_UTR 45.0%
GCTACCAGAGCTCAAACTAA+AGG - chr2_1:42299366-42299385 None:intergenic 45.0%
!! AATAATATAATACTAATAAT+GGG + chr2_1:42288757-42288776 Msa0208070:exon 5.0%
!! CTAAAAAAAATAATAAAAAA+TGG - chr2_1:42290127-42290146 None:intergenic 5.0%
!!! ATTTTTTTTTTAAAGATTAA+TGG + chr2_1:42290184-42290203 Msa0208070:intron 5.0%
!!! TATATATTTTATAGTTATAT+AGG + chr2_1:42290598-42290617 Msa0208070:intron 5.0%
!! GAATAATTAAATAAAAATTA+AGG + chr2_1:42293931-42293950 Msa0208070:intron 5.0%
!! ATAATTAAATAACAAAATTA+AGG - chr2_1:42294237-42294256 None:intergenic 5.0%
!!! AATAAATTTTAAACAAATTA+TGG + chr2_1:42294266-42294285 Msa0208070:intron 5.0%
!! AAAAAAAAAAAAAAAATAGT+AGG - chr2_1:42294475-42294494 None:intergenic 5.0%
CGATGAGAAAGGTTCAGAGG+TGG - chr2_1:42288733-42288752 None:intergenic 50.0%
!! CGAGAGGTGTCATTTGAGGA+AGG - chr2_1:42288888-42288907 None:intergenic 50.0%
GACGACTCGAGGAATCTAAC+TGG - chr2_1:42289050-42289069 None:intergenic 50.0%
CCTTCCAAATTGACGACTCG+AGG - chr2_1:42289061-42289080 None:intergenic 50.0%
CCTCGAGTCGTCAATTTGGA+AGG + chr2_1:42289058-42289077 Msa0208070:intron 50.0%
GGAAATGTTAACTGGTGCCC+CGG + chr2_1:42289106-42289125 Msa0208070:intron 50.0%
GAAATGTTAACTGGTGCCCC+GGG + chr2_1:42289107-42289126 Msa0208070:intron 50.0%
TAAGGTCTAACCAATGCCCG+GGG - chr2_1:42289126-42289145 None:intergenic 50.0%
GTGGCCTAAGCTAGGATTTC+TGG + chr2_1:42289201-42289220 Msa0208070:intron 50.0%
GCAAGGACATGTTCAAGACC+TGG + chr2_1:42289418-42289437 Msa0208070:CDS 50.0%
GTTGGGGCCATACAATCTGA+TGG - chr2_1:42289758-42289777 None:intergenic 50.0%
CCCTATTGAGGGACAACTCT+TGG + chr2_1:42290058-42290077 Msa0208070:intron 50.0%
GCCAAGAGTTGTCCCTCAAT+AGG - chr2_1:42290062-42290081 None:intergenic 50.0%
TGGAAAAGGGGGCCAACTTT+AGG + chr2_1:42290204-42290223 Msa0208070:intron 50.0%
GTAGGCCCCATATATGAAGG+AGG - chr2_1:42290230-42290249 None:intergenic 50.0%
!! CTGCAGGATTTGGTGCTAAG+TGG + chr2_1:42290842-42290861 Msa0208070:CDS 50.0%
!! GGATTTGGTGCTAAGTGGCT+TGG + chr2_1:42290847-42290866 Msa0208070:CDS 50.0%
GTTAAGATCCAGGCACCAAC+TGG - chr2_1:42291215-42291234 None:intergenic 50.0%
!! TGGTTTGAGGAGTAGTGGGT+TGG + chr2_1:42291452-42291471 Msa0208070:intron 50.0%
!! AGTGGGTTGGATAGAAGTGC+GGG + chr2_1:42291465-42291484 Msa0208070:intron 50.0%
AGTGCGGGGATGCATTTGTT+AGG + chr2_1:42291480-42291499 Msa0208070:intron 50.0%
TCATGCATTGAGGAGAGGGA+AGG + chr2_1:42291615-42291634 Msa0208070:intron 50.0%
!! GCCATTGGGGAAAAGCATTC+AGG - chr2_1:42291957-42291976 None:intergenic 50.0%
GGTTCTCGCATATCTGCCAT+TGG - chr2_1:42291972-42291991 None:intergenic 50.0%
AATTGGGGTTCCTTAGAGCC+TGG - chr2_1:42292050-42292069 None:intergenic 50.0%
!! TCTTGGGTGGCTAGCCTAAT+TGG + chr2_1:42292352-42292371 Msa0208070:intron 50.0%
GCTTAAGAGCTCTACGATGG+TGG + chr2_1:42292595-42292614 Msa0208070:intron 50.0%
!! CACCGCACCAATTTTTGAGG+TGG - chr2_1:42292677-42292696 None:intergenic 50.0%
CCTCAAAAATTGGTGCGGTG+CGG + chr2_1:42292677-42292696 Msa0208070:intron 50.0%
CTCAAAAATTGGTGCGGTGC+GGG + chr2_1:42292678-42292697 Msa0208070:intron 50.0%
!!! GCGTAGTGGGCACTATTTTG+TGG + chr2_1:42292709-42292728 Msa0208070:intron 50.0%
GGTAGGAGTTCTCTGAACTC+TGG - chr2_1:42293084-42293103 None:intergenic 50.0%
CTGGTCTAGGAGCTTATCTC+TGG - chr2_1:42293105-42293124 None:intergenic 50.0%
ACAGGAAAGCCTAGAGGATG+AGG - chr2_1:42293172-42293191 None:intergenic 50.0%
GACTATCAATGCCACGTGGA+TGG + chr2_1:42293213-42293232 Msa0208070:intron 50.0%
ATGACTGTAGGCTGCACAAC+TGG - chr2_1:42294039-42294058 None:intergenic 50.0%
AGAGAGAGATTGGAGTGCGA+TGG + chr2_1:42294074-42294093 Msa0208070:intron 50.0%
AGGGGTTGTGCTACCTGTAA+GGG - chr2_1:42295038-42295057 None:intergenic 50.0%
TAGGGGTTGTGCTACCTGTA+AGG - chr2_1:42295039-42295058 None:intergenic 50.0%
TGGTCTACAACACAGGAGGA+GGG - chr2_1:42295067-42295086 None:intergenic 50.0%
ATGGTCTACAACACAGGAGG+AGG - chr2_1:42295068-42295087 None:intergenic 50.0%
GACAACGTCATTGTCGAGGA+GGG - chr2_1:42295091-42295110 None:intergenic 50.0%
TGACAACGTCATTGTCGAGG+AGG - chr2_1:42295092-42295111 None:intergenic 50.0%
TCCTCGACAATGACGTTGTC+AGG + chr2_1:42295091-42295110 Msa0208070:intron 50.0%
TCCTGACAACGTCATTGTCG+AGG - chr2_1:42295095-42295114 None:intergenic 50.0%
ACGTTTGAACCCCAAGCTCA+GGG - chr2_1:42295118-42295137 None:intergenic 50.0%
AACGTTTGAACCCCAAGCTC+AGG - chr2_1:42295119-42295138 None:intergenic 50.0%
GTTGTTGAAAGGGGTGGTCT+CGG + chr2_1:42295285-42295304 Msa0208070:intron 50.0%
GTCAGCGACAAGTAGTTTGG+TGG + chr2_1:42295331-42295350 Msa0208070:intron 50.0%
! AGCGACAAGTAGTTTGGTGG+AGG + chr2_1:42295334-42295353 Msa0208070:intron 50.0%
!! TGGTGGAGGAAGGTTTTGTG+GGG + chr2_1:42295348-42295367 Msa0208070:intron 50.0%
TTGTAGGAAGGCTCGATCAG+CGG - chr2_1:42295486-42295505 None:intergenic 50.0%
TGCTTGTGTTTCAGCTCCAG+CGG - chr2_1:42295645-42295664 None:intergenic 50.0%
TGTCACTATGAGGCTGAGTG+TGG + chr2_1:42296037-42296056 Msa0208070:intron 50.0%
CTGAGTGTGGACACAAGACT+GGG + chr2_1:42296050-42296069 Msa0208070:intron 50.0%
TGAGTGTGGACACAAGACTG+GGG + chr2_1:42296051-42296070 Msa0208070:intron 50.0%
! GGACACAAGACTGGGGATTT+TGG + chr2_1:42296058-42296077 Msa0208070:intron 50.0%
CATGCACAGAAAGTAGCCAC+AGG + chr2_1:42296146-42296165 Msa0208070:intron 50.0%
ATGCCCAAGTGTCAGGCTTA+GGG + chr2_1:42296448-42296467 Msa0208070:intron 50.0%
!! TGACTTTTGGGTATGGGAGG+GGG + chr2_1:42298121-42298140 Msa0208070:intron 50.0%
AATATGTGTGCGTGTCTGCG+GGG - chr2_1:42298618-42298637 None:intergenic 50.0%
AAAACTCGGTATCCAGCCCA+AGG + chr2_1:42298642-42298661 Msa0208070:intron 50.0%
! AGATTAGTCGTTCCTTGGGC+TGG - chr2_1:42298657-42298676 None:intergenic 50.0%
CCCAAGGAACGACTAATCTG+AGG + chr2_1:42298658-42298677 Msa0208070:intron 50.0%
! CCCTCAGATTAGTCGTTCCT+TGG - chr2_1:42298662-42298681 None:intergenic 50.0%
!! CCGCAAATGGATGGTGGAAT+TGG - chr2_1:42298687-42298706 None:intergenic 50.0%
AGCCAGAGCAAAGCTCTGTA+TGG + chr2_1:42298719-42298738 Msa0208070:intron 50.0%
GTCCATACAGAGCTTTGCTC+TGG - chr2_1:42298724-42298743 None:intergenic 50.0%
ATGGACCAGTCCACCGAAAT+TGG + chr2_1:42298738-42298757 Msa0208070:intron 50.0%
! ATTCCCACCGGTGCCAATTT+CGG - chr2_1:42298754-42298773 None:intergenic 50.0%
TGAATGCCCTGTTCCACTTG+AGG + chr2_1:42298787-42298806 Msa0208070:intron 50.0%
GAATGCCCTGTTCCACTTGA+GGG + chr2_1:42298788-42298807 Msa0208070:intron 50.0%
ACATGCCCTCAAGTGGAACA+GGG - chr2_1:42298796-42298815 None:intergenic 50.0%
TACATGCCCTCAAGTGGAAC+AGG - chr2_1:42298797-42298816 None:intergenic 50.0%
! CAGAGACCAGAAAAGGTGTG+AGG - chr2_1:42298962-42298981 None:intergenic 50.0%
!! CACACCTTTTCTGGTCTCTG+TGG + chr2_1:42298962-42298981 Msa0208070:CDS 50.0%
!! CACCTTTTCTGGTCTCTGTG+GGG + chr2_1:42298964-42298983 Msa0208070:CDS 50.0%
!! ACCTTTTCTGGTCTCTGTGG+GGG + chr2_1:42298965-42298984 Msa0208070:CDS 50.0%
GTATGCGCTCACTACGATCA+AGG + chr2_1:42299330-42299349 Msa0208070:three_prime_UTR 50.0%
GTCTTTCGAATTGGGCGGTG+TGG - chr2_1:42288586-42288605 None:intergenic 55.0%
TCAACTCTCCCAACACCGTG+CGG - chr2_1:42289000-42289019 None:intergenic 55.0%
TTTGGAAGGTAGCCCAGTCC+CGG + chr2_1:42289072-42289091 Msa0208070:intron 55.0%
GCGCATACTCTTGCTCCATC+AGG + chr2_1:42290907-42290926 Msa0208070:CDS 55.0%
!! AGGGGTCTCCTTTAGAGCTG+TGG + chr2_1:42291131-42291150 Msa0208070:intron 55.0%
!! GTGGGTTGGATAGAAGTGCG+GGG + chr2_1:42291466-42291485 Msa0208070:intron 55.0%
GCATTGAGGAGAGGGAAGGA+AGG + chr2_1:42291619-42291638 Msa0208070:intron 55.0%
GGCGCAGCCACCTCAAAAAT+TGG + chr2_1:42292667-42292686 Msa0208070:intron 55.0%
! CCGCACCGCACCAATTTTTG+AGG - chr2_1:42292680-42292699 None:intergenic 55.0%
! GTGGGCACTATTTTGTGGCG+CGG + chr2_1:42292714-42292733 Msa0208070:intron 55.0%
GACCAAACCATCGTTCTGCG+TGG + chr2_1:42292870-42292889 Msa0208070:intron 55.0%
CACCACGCAGAACGATGGTT+TGG - chr2_1:42292875-42292894 None:intergenic 55.0%
ACACACACCACGCAGAACGA+TGG - chr2_1:42292880-42292899 None:intergenic 55.0%
CGTGGTGTGTGTGTGTGTAG+CGG + chr2_1:42292888-42292907 Msa0208070:intron 55.0%
GTCTACAACACAGGAGGAGG+GGG - chr2_1:42295065-42295084 None:intergenic 55.0%
GGTCTACAACACAGGAGGAG+GGG - chr2_1:42295066-42295085 None:intergenic 55.0%
GGGATGGTCTACAACACAGG+AGG - chr2_1:42295071-42295090 None:intergenic 55.0%
GGAGGGATGGTCTACAACAC+AGG - chr2_1:42295074-42295093 None:intergenic 55.0%
ACGTCATTGTCGAGGAGGGA+TGG - chr2_1:42295087-42295106 None:intergenic 55.0%
GTTGTCAGGACCCTGAGCTT+GGG + chr2_1:42295105-42295124 Msa0208070:intron 55.0%
TTGTCAGGACCCTGAGCTTG+GGG + chr2_1:42295106-42295125 Msa0208070:intron 55.0%
GTCTCGGTGGAGATTGGTGT+TGG + chr2_1:42295301-42295320 Msa0208070:intron 55.0%
GCTGAGTGTGGACACAAGAC+TGG + chr2_1:42296049-42296068 Msa0208070:intron 55.0%
CATGCCCAAGTGTCAGGCTT+AGG + chr2_1:42296447-42296466 Msa0208070:intron 55.0%
ACAGCCAGACAGACCTCAAG+AGG + chr2_1:42297887-42297906 Msa0208070:CDS 55.0%
!! GACTTTTGGGTATGGGAGGG+GGG + chr2_1:42298122-42298141 Msa0208070:intron 55.0%
!! ACTTTTGGGTATGGGAGGGG+GGG + chr2_1:42298123-42298142 Msa0208070:intron 55.0%
ATATGTGTGCGTGTCTGCGG+GGG - chr2_1:42298617-42298636 None:intergenic 55.0%
TTTAAACGGGGCCCCGCAAA+TGG - chr2_1:42298700-42298719 None:intergenic 55.0%
CAGTCCACCGAAATTGGCAC+CGG + chr2_1:42298744-42298763 Msa0208070:intron 55.0%
!! CACTGGCCTCACACCTTTTC+TGG + chr2_1:42298953-42298972 Msa0208070:CDS 55.0%
GTCTCTGTGGGGGCTAATTC+AGG + chr2_1:42298975-42298994 Msa0208070:CDS 55.0%
CAACTCTCCCAACACCGTGC+GGG - chr2_1:42288999-42289018 None:intergenic 60.0%
TTAACTGGTGCCCCGGGCAT+TGG + chr2_1:42289113-42289132 Msa0208070:intron 60.0%
!! AGTCTCGTAGCGGACCCAAG+TGG + chr2_1:42289182-42289201 Msa0208070:intron 60.0%
GGACCCAAGTGGCCTAAGCT+AGG + chr2_1:42289193-42289212 Msa0208070:intron 60.0%
GAGGAGAGGGAAGGAAGGCA+AGG + chr2_1:42291624-42291643 Msa0208070:intron 60.0%
GTCAAAGCGGAAATGCGGCG+CGG + chr2_1:42292646-42292665 Msa0208070:intron 60.0%
AAATTGGTGCGGTGCGGGAG+CGG + chr2_1:42292683-42292702 Msa0208070:intron 60.0%
TGTGTGTGTAGCGGCCGCTT+TGG + chr2_1:42292897-42292916 Msa0208070:intron 60.0%
AGCCCGCTATTCAGCAGTGC+GGG - chr2_1:42292938-42292957 None:intergenic 60.0%
CAGCCCGCTATTCAGCAGTG+CGG - chr2_1:42292939-42292958 None:intergenic 60.0%
ACATACGACACGCTCCGTCG+CGG + chr2_1:42292974-42292993 Msa0208070:intron 60.0%
TCCGCTGCGCTCCACTATAG+CGG + chr2_1:42293020-42293039 Msa0208070:intron 60.0%
GCGGCCGCTATTGACAACAG+AGG + chr2_1:42293048-42293067 Msa0208070:intron 60.0%
!! ACAGGAGGAGGGGGTGTTAG+GGG - chr2_1:42295056-42295075 None:intergenic 60.0%
!! CACAGGAGGAGGGGGTGTTA+GGG - chr2_1:42295057-42295076 None:intergenic 60.0%
!! ACACAGGAGGAGGGGGTGTT+AGG - chr2_1:42295058-42295077 None:intergenic 60.0%
CGTTGTCAGGACCCTGAGCT+TGG + chr2_1:42295104-42295123 Msa0208070:intron 60.0%
GTTGAAAGGGGTGGTCTCGG+TGG + chr2_1:42295288-42295307 Msa0208070:intron 60.0%
TAGGAAGGCTCGATCAGCGG+TGG - chr2_1:42295483-42295502 None:intergenic 60.0%
TATGTGTGCGTGTCTGCGGG+GGG - chr2_1:42298616-42298635 None:intergenic 60.0%
! CGGTGCCAATTTCGGTGGAC+TGG - chr2_1:42298746-42298765 None:intergenic 60.0%
! TCCACCGAAATTGGCACCGG+TGG + chr2_1:42298747-42298766 Msa0208070:intron 60.0%
!! CCACCGAAATTGGCACCGGT+GGG + chr2_1:42298748-42298767 Msa0208070:intron 60.0%
GCCCCCACAGAGACCAGAAA+AGG - chr2_1:42298969-42298988 None:intergenic 60.0%
AATTGGTGCGGTGCGGGAGC+GGG + chr2_1:42292684-42292703 Msa0208070:intron 65.0%
CGCCCCGCACTGCTGAATAG+CGG + chr2_1:42292932-42292951 Msa0208070:intron 65.0%
GCCCCGCACTGCTGAATAGC+GGG + chr2_1:42292933-42292952 Msa0208070:intron 65.0%
GCCCGCTATTCAGCAGTGCG+GGG - chr2_1:42292937-42292956 None:intergenic 65.0%
! CCCGCTATAGTGGAGCGCAG+CGG - chr2_1:42293024-42293043 None:intergenic 65.0%
CCGCTGCGCTCCACTATAGC+GGG + chr2_1:42293021-42293040 Msa0208070:intron 65.0%
! CTGCGCTCCACTATAGCGGG+TGG + chr2_1:42293024-42293043 Msa0208070:intron 65.0%
!! CTCCACTATAGCGGGTGGCG+CGG + chr2_1:42293029-42293048 Msa0208070:intron 65.0%
GGGGTGGTCTCGGTGGAGAT+TGG + chr2_1:42295295-42295314 Msa0208070:intron 65.0%
GAAGGCTCGATCAGCGGTGG+CGG - chr2_1:42295480-42295499 None:intergenic 65.0%
AACGGGGCCCCGCAAATGGA+TGG - chr2_1:42298696-42298715 None:intergenic 65.0%
! CCCACCGGTGCCAATTTCGG+TGG - chr2_1:42298751-42298770 None:intergenic 65.0%
ATTGGTGCGGTGCGGGAGCG+GGG + chr2_1:42292685-42292704 Msa0208070:intron 70.0%
TCCGTCGCGGCTAGGAGCAG+TGG + chr2_1:42292987-42293006 Msa0208070:intron 70.0%
CCCACTGCTCCTAGCCGCGA+CGG - chr2_1:42292991-42293010 None:intergenic 70.0%
CCGTCGCGGCTAGGAGCAGT+GGG + chr2_1:42292988-42293007 Msa0208070:intron 70.0%
GCGTGTCTGCGGGGGGATGT+GGG - chr2_1:42298609-42298628 None:intergenic 70.0%
TGCGTGTCTGCGGGGGGATG+TGG - chr2_1:42298610-42298629 None:intergenic 70.0%
GGGGCCCCGCAAATGGATGG+TGG - chr2_1:42298693-42298712 None:intergenic 70.0%
! TGCGGGAGCGGGGAGCGTAG+TGG + chr2_1:42292695-42292714 Msa0208070:intron 75.0%
! GCGGGAGCGGGGAGCGTAGT+GGG + chr2_1:42292696-42292715 Msa0208070:intron 75.0%
CGACACGCTCCGTCGCGGCT+AGG + chr2_1:42292979-42292998 Msa0208070:intron 75.0%
GGCCGCGCCACCCGCTATAG+TGG - chr2_1:42293034-42293053 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 42288541 42299534 42288541 ID=Msa0208070;Name=Msa0208070
chr2_1 mRNA 42288541 42299534 42288541 ID=Msa0208070-mRNA-1;Parent=Msa0208070;Name=Msa0208070-mRNA-1;_AED=0.06;_eAED=0.06;_QI=234|1|1|1|1|1|11|325|377
chr2_1 exon 42288541 42288911 42288541 ID=Msa0208070-mRNA-1:exon:12687;Parent=Msa0208070-mRNA-1
chr2_1 exon 42289410 42289501 42289410 ID=Msa0208070-mRNA-1:exon:12688;Parent=Msa0208070-mRNA-1
chr2_1 exon 42289707 42289813 42289707 ID=Msa0208070-mRNA-1:exon:12689;Parent=Msa0208070-mRNA-1
chr2_1 exon 42290823 42290928 42290823 ID=Msa0208070-mRNA-1:exon:12690;Parent=Msa0208070-mRNA-1
chr2_1 exon 42291979 42292101 42291979 ID=Msa0208070-mRNA-1:exon:12691;Parent=Msa0208070-mRNA-1
chr2_1 exon 42293411 42293502 42293411 ID=Msa0208070-mRNA-1:exon:12692;Parent=Msa0208070-mRNA-1
chr2_1 exon 42296638 42296722 42296638 ID=Msa0208070-mRNA-1:exon:12693;Parent=Msa0208070-mRNA-1
chr2_1 exon 42297622 42297727 42297622 ID=Msa0208070-mRNA-1:exon:12694;Parent=Msa0208070-mRNA-1
chr2_1 exon 42297842 42297908 42297842 ID=Msa0208070-mRNA-1:exon:12695;Parent=Msa0208070-mRNA-1
chr2_1 exon 42298904 42298996 42298904 ID=Msa0208070-mRNA-1:exon:12696;Parent=Msa0208070-mRNA-1
chr2_1 exon 42299084 42299534 42299084 ID=Msa0208070-mRNA-1:exon:12697;Parent=Msa0208070-mRNA-1
chr2_1 five_prime_UTR 42288541 42288774 42288541 ID=Msa0208070-mRNA-1:five_prime_utr;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42288775 42288911 42288775 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42289410 42289501 42289410 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42289707 42289813 42289707 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42290823 42290928 42290823 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42291979 42292101 42291979 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42293411 42293502 42293411 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42296638 42296722 42296638 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42297622 42297727 42297622 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42297842 42297908 42297842 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42298904 42298996 42298904 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 CDS 42299084 42299209 42299084 ID=Msa0208070-mRNA-1:cds;Parent=Msa0208070-mRNA-1
chr2_1 three_prime_UTR 42299210 42299534 42299210 ID=Msa0208070-mRNA-1:three_prime_utr;Parent=Msa0208070-mRNA-1
Gene Sequence

>Msa0208070

ATGGGTGGAAAAGTTAAGATCTGGAATCCCGTTGAAATCGCAGAACAAGCTCGGAATGATTACGCTTCGCAGATTTTTCCTTCTCTTCTCTCCATTGATCCTTCTCTTTCCCTTCCTCAAATGACACCTCTCGTCATTAATTTGTGCAAGGACATGTTCAAGACCTGGTCAAGTTTAGGTGATTCTTGCTTTAAAGTTGAGAAAATTTCTGGAGGCATAACAAATTTATTACTGAAGGTTTCAGTTAAACAAGGGGACTCTATTGATGATATTATAACCATCAGATTGTATGGCCCCAACACCGAGCATATCATTGATCGCTTTCGAGAATTGCAGGCCATCAAATACATCACTGCTGCAGGATTTGGTGCTAAGTGGCTTGGAATATTTGGAAATGGCATAGTGCAATCTTTTATTAATGCGCATACTCTTGCTCCATCAGATATGCGAGAACCAAAACTGGTTGCCAAAATAGCCAAACAACTGCAAAAATTTCACGGTGTGGAAATTCCAGGCTCTAAGGAACCCCAATTATGGAATGATATCTGGAAGTTTTTTGAGAAAGCATCTGTTCTAGAATTTGGTGATAATGAAAAGCAAAAGACTTACAAGACAGTTTCATTCAAGGAAGTTCATGATGAAATTTATGAGCTCCAGGTGTTGTGTGATCGTCTCAAATCTCCTGTAATTTTTTCTCACAATGACTTGCTTTCTGGAAACATAATGATTAATCATGAAGAAGATAAACTTTACTTCATTGATTATGAGTATGCATCATACAACTACAGAGGCTATGACATAGGGAATCACTTTGCAGAATATGCTGGTTTTGAATGTGATTACTCCTTGTACCCAAATATGAACGAACAATATCATTTCTTCAGGCATTACTTACAGCCAGACAGACCTCAAGAGGTGTCTGAGAATGATCTTAAAACTTTGTATGTTGAGGTAAATACATATGCACTGGCCTCACACCTTTTCTGGTCTCTGTGGGGGCTAATTCAGGCAAAGATGTCCCCAATAGAATTTGATTATCTTGGTTACTTTTTCCTTCGATACAACGAGTACAAAAGGCAGAAAGAAAAGCTTGTATCGATGGCGCTATCCTACCTTTTAGAAAGGAATGAGTAG

Protein sequence

>Msa0208070

MGGKVKIWNPVEIAEQARNDYASQIFPSLLSIDPSLSLPQMTPLVINLCKDMFKTWSSLGDSCFKVEKISGGITNLLLKVSVKQGDSIDDIITIRLYGPNTEHIIDRFRELQAIKYITAAGFGAKWLGIFGNGIVQSFINAHTLAPSDMREPKLVAKIAKQLQKFHGVEIPGSKEPQLWNDIWKFFEKASVLEFGDNEKQKTYKTVSFKEVHDEIYELQVLCDRLKSPVIFSHNDLLSGNIMINHEEDKLYFIDYEYASYNYRGYDIGNHFAEYAGFECDYSLYPNMNEQYHFFRHYLQPDRPQEVSENDLKTLYVEVNTYALASHLFWSLWGLIQAKMSPIEFDYLGYFFLRYNEYKRQKEKLVSMALSYLLERNE*