Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209290 | XP_013463924.1 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209290 | sp|Q9QYL8|LYPA2_RAT | 34.071 | 226 | 123 | 6 | 30 | 248 | 22 | 228 | 9.06e-34 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209290 | A0A072V7E9 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0209290 | Msa0209710 | 0.828249 | 9.984513e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209290 | MtrunA17_Chr2g0306861 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 523 |
| Msa0209290 | MtrunA17_Chr3g0138041 | 72.458 | 236 | 65 | 0 | 17 | 252 | 19 | 254 | 2.81e-132 | 374 |
| Msa0209290 | MtrunA17_Chr2g0332581 | 67.717 | 254 | 80 | 1 | 1 | 252 | 1 | 254 | 8.56e-122 | 347 |
| Msa0209290 | MtrunA17_Chr4g0003791 | 66.255 | 243 | 82 | 0 | 10 | 252 | 13 | 255 | 1.95e-119 | 342 |
| Msa0209290 | MtrunA17_Chr4g0075571 | 27.632 | 228 | 134 | 7 | 32 | 248 | 4 | 211 | 3.22e-19 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209290 | AT5G20060.1 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209290 | AT5G20060.4 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209290 | AT5G20060.3 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209290 | AT5G20060.2 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209290 | AT3G15650.2 | 62.637 | 273 | 82 | 2 | 1 | 253 | 1 | 273 | 2.67e-125 | 357 |
| Msa0209290 | AT1G52700.3 | 64.961 | 254 | 88 | 1 | 1 | 253 | 1 | 254 | 2.86e-124 | 353 |
| Msa0209290 | AT1G52700.2 | 64.961 | 254 | 88 | 1 | 1 | 253 | 1 | 254 | 2.86e-124 | 353 |
| Msa0209290 | AT1G52700.4 | 65.984 | 244 | 83 | 0 | 10 | 253 | 2 | 245 | 1.49e-122 | 349 |
| Msa0209290 | AT3G15650.1 | 67.323 | 254 | 82 | 1 | 1 | 253 | 1 | 254 | 1.86e-121 | 347 |
| Msa0209290 | AT3G15650.3 | 69.620 | 237 | 72 | 0 | 17 | 253 | 28 | 264 | 5.10e-119 | 341 |
| Msa0209290 | AT1G52700.5 | 62.376 | 202 | 76 | 0 | 52 | 253 | 1 | 202 | 5.24e-95 | 278 |
| Msa0209290 | AT1G52700.6 | 66.667 | 195 | 64 | 1 | 1 | 194 | 1 | 195 | 5.98e-95 | 277 |
| Msa0209290 | AT1G52700.1 | 66.667 | 195 | 64 | 1 | 1 | 194 | 1 | 195 | 5.98e-95 | 277 |
| Msa0209290 | AT1G51300.3 | 40.928 | 237 | 132 | 2 | 18 | 252 | 34 | 264 | 2.81e-62 | 197 |
| Msa0209290 | AT1G51300.2 | 42.308 | 208 | 112 | 2 | 18 | 223 | 34 | 235 | 3.20e-56 | 181 |
| Msa0209290 | AT1G52695.1 | 38.430 | 242 | 134 | 5 | 10 | 250 | 4 | 231 | 1.05e-48 | 160 |
| Msa0209290 | AT1G51300.1 | 46.667 | 150 | 72 | 2 | 18 | 165 | 23 | 166 | 6.14e-42 | 142 |
| Msa0209290 | AT1G47786.1 | 41.463 | 164 | 80 | 4 | 4 | 165 | 34 | 183 | 8.92e-34 | 121 |
| Msa0209290 | AT1G52470.1 | 32.794 | 247 | 144 | 4 | 3 | 248 | 1 | 226 | 1.37e-32 | 119 |
| Msa0209290 | AT1G52460.1 | 37.395 | 238 | 112 | 9 | 23 | 251 | 12 | 221 | 1.94e-32 | 119 |
| Msa0209290 | AT1G47780.1 | 48.182 | 110 | 54 | 1 | 59 | 168 | 23 | 129 | 2.91e-27 | 102 |
| Msa0209290 | AT1G52470.3 | 33.500 | 200 | 111 | 4 | 3 | 201 | 1 | 179 | 4.31e-26 | 100 |
| Msa0209290 | AT1G52470.2 | 33.679 | 193 | 106 | 4 | 3 | 194 | 1 | 172 | 5.95e-25 | 97.8 |
| Msa0209290 | AT4G22300.1 | 31.111 | 225 | 124 | 7 | 35 | 248 | 51 | 255 | 1.44e-22 | 93.6 |
| Msa0209290 | AT1G52440.1 | 31.197 | 234 | 103 | 7 | 23 | 251 | 16 | 196 | 1.37e-21 | 89.7 |
| Msa0209290 | AT4G22305.1 | 27.803 | 223 | 134 | 6 | 35 | 248 | 6 | 210 | 2.06e-18 | 81.6 |
Find 101 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAAAATAACATGTTTATT+TGG | 0.153599 | 2_1:+46875171 | None:intergenic |
| TGCTTGGCTAACATCAAAAT+TGG | 0.165141 | 2_1:-46875394 | Msa0209290:CDS |
| GTTTCGACTTTCTACCTTAA+TGG | 0.221762 | 2_1:+46881089 | None:intergenic |
| TGCTTTACTTCCGGGAAGTA+TGG | 0.226039 | 2_1:-46876408 | Msa0209290:CDS |
| CAAACATCGTCCGTTTCTTC+TGG | 0.239861 | 2_1:+46875417 | None:intergenic |
| CAAATATGAGAAGTATTTAA+TGG | 0.256093 | 2_1:-46875226 | Msa0209290:three_prime_UTR |
| ACTCGGCCAATGTCTTTATT+TGG | 0.262981 | 2_1:-46877929 | Msa0209290:CDS |
| GTTGCTTGGTGTTTACCTTT+AGG | 0.271813 | 2_1:+46880120 | None:intergenic |
| TCGAAGTGCTTGACTTCTAA+TGG | 0.272094 | 2_1:-46875592 | Msa0209290:CDS |
| TTTATTTGGAAAGTAGAAAT+AGG | 0.276465 | 2_1:+46875185 | None:intergenic |
| ATTAAATAATAATAGGAAAA+AGG | 0.282793 | 2_1:+46875299 | None:intergenic |
| GTAACTTTCAAAGCTTATAA+TGG | 0.292571 | 2_1:-46875559 | Msa0209290:CDS |
| CTCAACACTGCCGGCCATTA+AGG | 0.294584 | 2_1:-46881103 | Msa0209290:intron |
| TCAATAGGTGTATTCTTTAG+AGG | 0.302615 | 2_1:-46880343 | Msa0209290:five_prime_UTR |
| TCTGCATCCTGCTTTACTTC+CGG | 0.304345 | 2_1:-46876417 | Msa0209290:CDS |
| AAGGAGACAAACATATGTTT+TGG | 0.307789 | 2_1:+46875008 | None:intergenic |
| TATTTGTGGGCGAGTACATT+GGG | 0.326199 | 2_1:-46875266 | Msa0209290:three_prime_UTR |
| CAGCTTTAAGACTGCTCAAT+AGG | 0.328540 | 2_1:-46880358 | Msa0209290:five_prime_UTR |
| TTTGTGTGATGCAGATTAAA+TGG | 0.339269 | 2_1:-46877970 | Msa0209290:intron |
| CTGCATCCTGCTTTACTTCC+GGG | 0.350957 | 2_1:-46876416 | Msa0209290:CDS |
| TAACTTTCAAAGCTTATAAT+GGG | 0.351735 | 2_1:-46875558 | Msa0209290:intron |
| GACTAATATTAAATAATAAT+AGG | 0.361843 | 2_1:+46875292 | None:intergenic |
| CAGCTGTTGGTTTAAGTGGC+TGG | 0.364615 | 2_1:-46876353 | Msa0209290:CDS |
| CATCTAACAATCATGATTTA+CGG | 0.368703 | 2_1:+46875105 | None:intergenic |
| TTGCACGGCCTCGGTGATAA+TGG | 0.370731 | 2_1:-46880087 | Msa0209290:CDS |
| TGATTTCTCACCAAACTTGT+AGG | 0.380140 | 2_1:+46875615 | None:intergenic |
| CTTTCTTGCTAAAGCTAACT+AGG | 0.382057 | 2_1:+46875353 | None:intergenic |
| CTAGTTAGCTTTAGCAAGAA+AGG | 0.386301 | 2_1:-46875352 | Msa0209290:exon |
| AACACCAAGCAACTATAGTT+TGG | 0.387815 | 2_1:-46880110 | Msa0209290:CDS |
| CATGATTGTTAGATGGAGAT+TGG | 0.397270 | 2_1:-46875097 | Msa0209290:three_prime_UTR |
| ATTGCCATTCCCATACTTCC+CGG | 0.416403 | 2_1:+46876398 | None:intergenic |
| CGGCCAATGTCTTTATTTGG+TGG | 0.418435 | 2_1:-46877926 | Msa0209290:CDS |
| AATATTAGTCGCATATTTGT+GGG | 0.420399 | 2_1:-46875279 | Msa0209290:three_prime_UTR |
| GCTGCAACAGCATATGAGTT+TGG | 0.425946 | 2_1:-46880162 | Msa0209290:CDS |
| CGTAAATCATGATTGTTAGA+TGG | 0.429932 | 2_1:-46875104 | Msa0209290:three_prime_UTR |
| TCAAACATACAAGCAGTAGA+TGG | 0.440371 | 2_1:+46877899 | None:intergenic |
| TCCCGATGATCTAGAAGGTT+TGG | 0.440893 | 2_1:-46877580 | Msa0209290:CDS |
| TTTCCATGACACATCAAAAT+GGG | 0.444600 | 2_1:+46876169 | None:intergenic |
| ACATCAAAATTGGGCCTTGA+GGG | 0.445931 | 2_1:-46875384 | Msa0209290:CDS |
| AAAGCAGGATGCAGAGTAAA+GGG | 0.452204 | 2_1:+46876425 | None:intergenic |
| GGGTTCTGTAGACAACAAAT+TGG | 0.456631 | 2_1:+46877536 | None:intergenic |
| GAAGACAACGCGCGGAGCTT+CGG | 0.461410 | 2_1:-46881129 | Msa0209290:five_prime_UTR |
| TCCAAACCTTCTAGATCATC+GGG | 0.462352 | 2_1:+46877579 | None:intergenic |
| ATATTTGTGGGCGAGTACAT+TGG | 0.479607 | 2_1:-46875267 | Msa0209290:three_prime_UTR |
| GGTGTTGGAGGGTTTAGCAT+GGG | 0.479769 | 2_1:-46876459 | Msa0209290:CDS |
| ATAGTTTGGTTGCACGGCCT+CGG | 0.479960 | 2_1:-46880096 | Msa0209290:CDS |
| CAGTTAAGCTTGGTGTTGGA+GGG | 0.484354 | 2_1:-46876470 | Msa0209290:CDS |
| ACCTATGTAGTCAGGCCTAA+AGG | 0.485798 | 2_1:-46880135 | Msa0209290:CDS |
| GATGTGGTTCCCTACAAGTT+TGG | 0.487511 | 2_1:-46875625 | Msa0209290:CDS |
| GCTTGGCTAACATCAAAATT+GGG | 0.487927 | 2_1:-46875393 | Msa0209290:CDS |
| TAATATTAGTCGCATATTTG+TGG | 0.488745 | 2_1:-46875280 | Msa0209290:three_prime_UTR |
| AGTGCAGCTGTTGGTTTAAG+TGG | 0.489233 | 2_1:-46876357 | Msa0209290:CDS |
| TAAAGCAGGATGCAGAGTAA+AGG | 0.489254 | 2_1:+46876424 | None:intergenic |
| ATTGGCCGAGTTGGAGCAGT+TGG | 0.490592 | 2_1:+46877941 | None:intergenic |
| GATTTCTCACCAAACTTGTA+GGG | 0.491095 | 2_1:+46875616 | None:intergenic |
| GCAGTTAAGCTTGGTGTTGG+AGG | 0.491887 | 2_1:-46876471 | Msa0209290:intron |
| ATCCAAACCTTCTAGATCAT+CGG | 0.494755 | 2_1:+46877578 | None:intergenic |
| TTGGAAGAACCTATGTAGTC+AGG | 0.494901 | 2_1:-46880143 | Msa0209290:CDS |
| ACTAGGCAGCATTGCCCTCA+AGG | 0.499385 | 2_1:+46875370 | None:intergenic |
| GTGGCAGTTAAGCTTGGTGT+TGG | 0.509868 | 2_1:-46876474 | Msa0209290:intron |
| GAAGCTCCCGATGATCTAGA+AGG | 0.514604 | 2_1:-46877585 | Msa0209290:CDS |
| ACAGCTGCACTTATGTTGGC+TGG | 0.519457 | 2_1:+46876369 | None:intergenic |
| AGCTTTGCTGCATCATCAGT+TGG | 0.519628 | 2_1:-46880312 | Msa0209290:intron |
| ACCAACAGCTGCACTTATGT+TGG | 0.521248 | 2_1:+46876365 | None:intergenic |
| CGTGTCCTTACATTTGGAAG+AGG | 0.521764 | 2_1:+46878095 | None:intergenic |
| GCTTTACTTCCGGGAAGTAT+GGG | 0.521974 | 2_1:-46876407 | Msa0209290:CDS |
| AATAAAGACATTGGCCGAGT+TGG | 0.524082 | 2_1:+46877932 | None:intergenic |
| TGGTGTTGGAGGGTTTAGCA+TGG | 0.525161 | 2_1:-46876460 | Msa0209290:CDS |
| ACCTTGAGTAACAAGTTACA+AGG | 0.525726 | 2_1:-46876226 | Msa0209290:CDS |
| CTACACAATTCCAGAAGAAA+CGG | 0.532566 | 2_1:-46875427 | Msa0209290:CDS |
| GCCTCGGTGATAATGGCTCC+AGG | 0.537078 | 2_1:-46880080 | Msa0209290:intron |
| AACATCAAAATTGGGCCTTG+AGG | 0.541176 | 2_1:-46875385 | Msa0209290:CDS |
| TTTGGAGAACTAAACGGTAT+CGG | 0.545261 | 2_1:+46875026 | None:intergenic |
| CCCTTGTAACTTGTTACTCA+AGG | 0.547923 | 2_1:+46876225 | None:intergenic |
| ATACTTCCCGGAAGTAAAGC+AGG | 0.551492 | 2_1:+46876410 | None:intergenic |
| ACCTTTAGGCCTGACTACAT+AGG | 0.553075 | 2_1:+46880134 | None:intergenic |
| CGACTTTCTACCTTAATGGC+CGG | 0.553624 | 2_1:+46881093 | None:intergenic |
| AAACGGACGATGTTTGTGCT+TGG | 0.557700 | 2_1:-46875410 | Msa0209290:CDS |
| GGTAAGAAACCTACTGTCTG+TGG | 0.558443 | 2_1:+46877515 | None:intergenic |
| TATTATTTCAGGTGATGATG+TGG | 0.558646 | 2_1:-46875641 | Msa0209290:intron |
| GCAACTATAGTTTGGTTGCA+CGG | 0.566413 | 2_1:-46880102 | Msa0209290:CDS |
| TTTCTTCTGGAATTGTGTAG+TGG | 0.572704 | 2_1:+46875430 | None:intergenic |
| GCAACCAAACTATAGTTGCT+TGG | 0.580548 | 2_1:+46880106 | None:intergenic |
| ATGTGTGTGGCAGTTAAGCT+TGG | 0.584859 | 2_1:-46876480 | Msa0209290:intron |
| GCCAACATAAGTGCAGCTGT+TGG | 0.585194 | 2_1:-46876366 | Msa0209290:CDS |
| ATTGTTAGATGGAGATTGGA+TGG | 0.604130 | 2_1:-46875093 | Msa0209290:three_prime_UTR |
| ACTTCCGGGAAGTATGGGAA+TGG | 0.604302 | 2_1:-46876402 | Msa0209290:CDS |
| AAGCCACCAAATAAAGACAT+TGG | 0.605790 | 2_1:+46877923 | None:intergenic |
| ATATGGACATACTTTGAACA+TGG | 0.609897 | 2_1:+46876327 | None:intergenic |
| ATTTGTGGGCGAGTACATTG+GGG | 0.619389 | 2_1:-46875265 | Msa0209290:three_prime_UTR |
| ATGACACATCAAAATGGGAA+AGG | 0.628605 | 2_1:+46876174 | None:intergenic |
| CTTCGGAGTCTCAACACTGC+CGG | 0.632675 | 2_1:-46881112 | Msa0209290:five_prime_UTR |
| GTAAGAAACCTACTGTCTGT+GGG | 0.636798 | 2_1:+46877516 | None:intergenic |
| AAAGGACTGAGCACGCCTCG+TGG | 0.645439 | 2_1:+46876192 | None:intergenic |
| CCTTGAGTAACAAGTTACAA+GGG | 0.647196 | 2_1:-46876225 | Msa0209290:CDS |
| TATGTCCAACTGCTCCAACT+CGG | 0.665947 | 2_1:-46877946 | Msa0209290:CDS |
| TTTGTGGGCGAGTACATTGG+GGG | 0.671416 | 2_1:-46875264 | Msa0209290:three_prime_UTR |
| CTTGAGTAACAAGTTACAAG+GGG | 0.675390 | 2_1:-46876224 | Msa0209290:CDS |
| ACAGTTAAGAAGACAACGCG+CGG | 0.704215 | 2_1:-46881137 | Msa0209290:five_prime_UTR |
| ACCTGGAGCCATTATCACCG+AGG | 0.734493 | 2_1:+46880079 | None:intergenic |
| AAGGGGTAGATGAAGCCACG+AGG | 0.754925 | 2_1:-46876207 | Msa0209290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTATTTATAATTTTT+CGG | + | chr2_1:46880647-46880666 | None:intergenic | 0.0% |
| !!! | ATGAACAATTTATTATTTTT+AGG | - | chr2_1:46876221-46876240 | Msa0209290:CDS | 10.0% |
| !! | ATAAATTATAATTAGAGAAA+AGG | + | chr2_1:46877805-46877824 | None:intergenic | 10.0% |
| !!! | ATGTTTTCATATAATAAATT+AGG | - | chr2_1:46878346-46878365 | Msa0209290:intron | 10.0% |
| !! | ATTTACAAATATATTATTTC+AGG | - | chr2_1:46880521-46880540 | Msa0209290:intron | 10.0% |
| !! | ATTAAATAATAATAGGAAAA+AGG | + | chr2_1:46880877-46880896 | None:intergenic | 10.0% |
| !! | GACTAATATTAAATAATAAT+AGG | + | chr2_1:46880884-46880903 | None:intergenic | 10.0% |
| !! | ATTCATAATTGAAAATGAAA+AGG | + | chr2_1:46875155-46875174 | None:intergenic | 15.0% |
| !!! | TTTCATTTTCAATTATGAAT+TGG | - | chr2_1:46875155-46875174 | Msa0209290:three_prime_UTR | 15.0% |
| !!! | TTCATTTTCAATTATGAATT+GGG | - | chr2_1:46875156-46875175 | Msa0209290:three_prime_UTR | 15.0% |
| !! | AGAAAAAACAAAATATAACA+TGG | + | chr2_1:46875265-46875284 | None:intergenic | 15.0% |
| !!! | TATTTTGTTTTTTCTTTTCT+TGG | - | chr2_1:46875270-46875289 | Msa0209290:three_prime_UTR | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | - | chr2_1:46875451-46875470 | Msa0209290:intron | 15.0% |
| !! | AAATTTGGAAAAAACAAAAT+AGG | + | chr2_1:46876132-46876151 | None:intergenic | 15.0% |
| !!! | AAAATTCTTCTATTAGTTTT+CGG | - | chr2_1:46876161-46876180 | Msa0209290:intron | 15.0% |
| !! | TAATTTATAATTATTCACGT+TGG | - | chr2_1:46876188-46876207 | Msa0209290:CDS | 15.0% |
| !! | TTATAAGCAATTATTCAAAA+GGG | + | chr2_1:46876330-46876349 | None:intergenic | 15.0% |
| !! | ATTATAAGCAATTATTCAAA+AGG | + | chr2_1:46876331-46876350 | None:intergenic | 15.0% |
| !!! | TAATGTATTTATTTGATTTG+TGG | - | chr2_1:46876347-46876366 | Msa0209290:CDS | 15.0% |
| !!! | AATGTATTTATTTGATTTGT+GGG | - | chr2_1:46876348-46876367 | Msa0209290:CDS | 15.0% |
| !!! | CTATCTCTTTTTATATTTTT+TGG | - | chr2_1:46877191-46877210 | Msa0209290:intron | 15.0% |
| !!! | GATTCTAAAGATAAATAATT+TGG | + | chr2_1:46878140-46878159 | None:intergenic | 15.0% |
| !! | ATCTTAAAATAACCTTAAAT+TGG | - | chr2_1:46878500-46878519 | Msa0209290:intron | 15.0% |
| !!! | TTTTTTTTTTTCCTAAACAT+AGG | - | chr2_1:46879455-46879474 | Msa0209290:intron | 15.0% |
| !!! | ATTTTAAAAATTGAACGTAT+GGG | + | chr2_1:46879507-46879526 | None:intergenic | 15.0% |
| !!! | AATTTTAAAAATTGAACGTA+TGG | + | chr2_1:46879508-46879527 | None:intergenic | 15.0% |
| !!! | CAAAAAATTGACATTTTAAA+TGG | + | chr2_1:46880326-46880345 | None:intergenic | 15.0% |
| !! | TATTATTTGAACATCAATTT+CGG | + | chr2_1:46880350-46880369 | None:intergenic | 15.0% |
| !!! | TCATTTTCAATTATGAATTG+GGG | - | chr2_1:46875157-46875176 | Msa0209290:three_prime_UTR | 20.0% |
| !! | ATATAATTCAAATCCTAACA+TGG | + | chr2_1:46875493-46875512 | None:intergenic | 20.0% |
| !! | TAACTTTCTTTGTAAAATCA+TGG | - | chr2_1:46875695-46875714 | Msa0209290:intron | 20.0% |
| !!! | AATTTTCAGTCATACAAATT+TGG | + | chr2_1:46876147-46876166 | None:intergenic | 20.0% |
| !!! | AAATTCTTCTATTAGTTTTC+GGG | - | chr2_1:46876162-46876181 | Msa0209290:intron | 20.0% |
| !! | TATAAGCAATTATTCAAAAG+GGG | + | chr2_1:46876329-46876348 | None:intergenic | 20.0% |
| !!! | ATGTATTTATTTGATTTGTG+GGG | - | chr2_1:46876349-46876368 | Msa0209290:CDS | 20.0% |
| !! | AACACATTCTTATTGTAAAA+GGG | + | chr2_1:46876454-46876473 | None:intergenic | 20.0% |
| !! | AAACACATTCTTATTGTAAA+AGG | + | chr2_1:46876455-46876474 | None:intergenic | 20.0% |
| !! | AATATAAAAAGAGATAGTGA+TGG | + | chr2_1:46877188-46877207 | None:intergenic | 20.0% |
| !! | ATAATAACGATACTAATAAG+AGG | - | chr2_1:46877507-46877526 | Msa0209290:intron | 20.0% |
| !! | AAAAAAAGAGAGTTAAATCA+GGG | + | chr2_1:46878029-46878048 | None:intergenic | 20.0% |
| !!! | TATCTTTAGAATCAATAAGA+TGG | - | chr2_1:46878147-46878166 | Msa0209290:intron | 20.0% |
| !! | TATAATAAATTAGGTGTATG+AGG | - | chr2_1:46878355-46878374 | Msa0209290:intron | 20.0% |
| !! | AATTTATCAAGACCAATTTA+AGG | + | chr2_1:46878515-46878534 | None:intergenic | 20.0% |
| !!! | TATTTTCATCAAAAGCAAAA+GGG | + | chr2_1:46879331-46879350 | None:intergenic | 20.0% |
| !!! | TTATATTTCTATTGTTGTCT+AGG | - | chr2_1:46879924-46879943 | Msa0209290:intron | 20.0% |
| !! | TGAACTTAATTAAACATATG+TGG | - | chr2_1:46880069-46880088 | Msa0209290:intron | 20.0% |
| !! | TAACTTTCAAAGCTTATAAT+GGG | - | chr2_1:46880615-46880634 | Msa0209290:intron | 20.0% |
| !! | AAAAATTAATATGAAGCAAG+TGG | + | chr2_1:46880694-46880713 | None:intergenic | 20.0% |
| !!! | ACTTGCTTCATATTAATTTT+TGG | - | chr2_1:46880693-46880712 | Msa0209290:intron | 20.0% |
| !!! | CTTCATATTAATTTTTGGTT+TGG | - | chr2_1:46880698-46880717 | Msa0209290:intron | 20.0% |
| !!! | AGAATTCTTTTTTCACATTT+TGG | + | chr2_1:46880849-46880868 | None:intergenic | 20.0% |
| !!! | CAAATATGAGAAGTATTTAA+TGG | - | chr2_1:46880947-46880966 | Msa0209290:intron | 20.0% |
| !! | TTTATTTGGAAAGTAGAAAT+AGG | + | chr2_1:46880991-46881010 | None:intergenic | 20.0% |
| !! | GTCAAAATAACATGTTTATT+TGG | + | chr2_1:46881005-46881024 | None:intergenic | 20.0% |
| !! | AAAAAAAGCATGAGATTGTA+AGG | + | chr2_1:46875125-46875144 | None:intergenic | 25.0% |
| !!! | GGTTATTGATTTCTAAATTG+TGG | - | chr2_1:46875178-46875197 | Msa0209290:three_prime_UTR | 25.0% |
| !! | TTTTCTTTTCTTGGAATGTA+TGG | - | chr2_1:46875279-46875298 | Msa0209290:three_prime_UTR | 25.0% |
| ! | TATAGATGAGATTTGAACTA+TGG | - | chr2_1:46875334-46875353 | Msa0209290:three_prime_UTR | 25.0% |
| ! | ACATAAGTCAGTATAATCAT+AGG | + | chr2_1:46875432-46875451 | None:intergenic | 25.0% |
| ! | GATTTGAATTATATCCATTG+AGG | - | chr2_1:46875499-46875518 | Msa0209290:intron | 25.0% |
| ! | CATTTCTCTTTCAATAAAGT+GGG | + | chr2_1:46875568-46875587 | None:intergenic | 25.0% |
| ! | TCATTTCTCTTTCAATAAAG+TGG | + | chr2_1:46875569-46875588 | None:intergenic | 25.0% |
| ! | AATTACACGCATAATCAAAA+TGG | + | chr2_1:46875907-46875926 | None:intergenic | 25.0% |
| !! | TTGATTATGCGTGTAATTTT+CGG | - | chr2_1:46875909-46875928 | Msa0209290:intron | 25.0% |
| !! | TTATTATTTGGGATCTCTTA+CGG | - | chr2_1:46875954-46875973 | Msa0209290:intron | 25.0% |
| ! | ATTCTTATTGTAAAAGGGAA+GGG | + | chr2_1:46876449-46876468 | None:intergenic | 25.0% |
| !! | ACAATAAGAATGTGTTTTGT+TGG | - | chr2_1:46876458-46876477 | Msa0209290:CDS | 25.0% |
| !!! | CAATAAGAATGTGTTTTGTT+GGG | - | chr2_1:46876459-46876478 | Msa0209290:CDS | 25.0% |
| ! | CCTAGTTAGCATAATTATTT+GGG | + | chr2_1:46876945-46876964 | None:intergenic | 25.0% |
| ! | CCAAATAATTATGCTAACTA+GGG | - | chr2_1:46876943-46876962 | Msa0209290:intron | 25.0% |
| ! | TGATAATATAGCAGTTAGTT+CGG | - | chr2_1:46876981-46877000 | Msa0209290:intron | 25.0% |
| !!! | TGAAATAGTTCTGCAATTTT+TGG | - | chr2_1:46877042-46877061 | Msa0209290:intron | 25.0% |
| ! | ACATAGTTATCTTTACTTCA+GGG | - | chr2_1:46877089-46877108 | Msa0209290:intron | 25.0% |
| ! | AGTTAAAGAGAAATAGTGAT+GGG | + | chr2_1:46877341-46877360 | None:intergenic | 25.0% |
| ! | TCATTTATATCCATCAACAT+TGG | + | chr2_1:46877403-46877422 | None:intergenic | 25.0% |
| ! | AGTATCGTTATTATGAGATT+CGG | + | chr2_1:46877501-46877520 | None:intergenic | 25.0% |
| !! | TTATTTCATATCACCTTTTG+AGG | + | chr2_1:46877568-46877587 | None:intergenic | 25.0% |
| !! | GTTTTACGTATCTCTTTTAA+TGG | + | chr2_1:46877929-46877948 | None:intergenic | 25.0% |
| ! | CAAAAAAAGAGAGTTAAATC+AGG | + | chr2_1:46878030-46878049 | None:intergenic | 25.0% |
| !!! | TGTATGTTTGATTGTTTTGT+AGG | - | chr2_1:46878286-46878305 | Msa0209290:intron | 25.0% |
| ! | TTTCCATATTTAGTAATGCT+TGG | - | chr2_1:46878435-46878454 | Msa0209290:intron | 25.0% |
| ! | AGCATTAACAGATAAAATTC+AGG | + | chr2_1:46878682-46878701 | None:intergenic | 25.0% |
| ! | ATCAACATAAGAAAAATGCT+AGG | + | chr2_1:46878883-46878902 | None:intergenic | 25.0% |
| ! | CATTGACATACATAACTAAA+AGG | + | chr2_1:46879056-46879075 | None:intergenic | 25.0% |
| !!! | GTTCTTTTTGTATTAGTCTA+AGG | - | chr2_1:46879085-46879104 | Msa0209290:intron | 25.0% |
| !!! | ATTTTGCTATACTTATGCTT+CGG | - | chr2_1:46879140-46879159 | Msa0209290:intron | 25.0% |
| !! | CTATTTTCATCAAAAGCAAA+AGG | + | chr2_1:46879332-46879351 | None:intergenic | 25.0% |
| !!! | TTTGCTTTTGATGAAAATAG+TGG | - | chr2_1:46879332-46879351 | Msa0209290:intron | 25.0% |
| ! | TGTTGTAAAAACCTATGTTT+AGG | + | chr2_1:46879469-46879488 | None:intergenic | 25.0% |
| !! | AACATAGGTTTTTACAACAA+CGG | - | chr2_1:46879470-46879489 | Msa0209290:intron | 25.0% |
| ! | ATAACTCATTAACCATTAAC+TGG | - | chr2_1:46880113-46880132 | Msa0209290:CDS | 25.0% |
| ! | TAACTCATTAACCATTAACT+GGG | - | chr2_1:46880114-46880133 | Msa0209290:CDS | 25.0% |
| ! | CAGTTTATAGAATGTAATTG+TGG | + | chr2_1:46880427-46880446 | None:intergenic | 25.0% |
| ! | ATTAAATCACCTATGTTTCA+TGG | + | chr2_1:46880484-46880503 | None:intergenic | 25.0% |
| ! | CATAGGTGATTTAATGTAAA+TGG | - | chr2_1:46880489-46880508 | Msa0209290:intron | 25.0% |
| ! | GTAACTTTCAAAGCTTATAA+TGG | - | chr2_1:46880614-46880633 | Msa0209290:intron | 25.0% |
| ! | TAATATTAGTCGCATATTTG+TGG | - | chr2_1:46880893-46880912 | Msa0209290:intron | 25.0% |
| ! | AATATTAGTCGCATATTTGT+GGG | - | chr2_1:46880894-46880913 | Msa0209290:intron | 25.0% |
| ! | CATCTAACAATCATGATTTA+CGG | + | chr2_1:46881071-46881090 | None:intergenic | 25.0% |
| !!! | ATATGTTTTGGAGAACTAAA+CGG | + | chr2_1:46881156-46881175 | None:intergenic | 25.0% |
| TTTCTTGGAATGTATGGTAT+TGG | - | chr2_1:46875285-46875304 | Msa0209290:three_prime_UTR | 30.0% | |
| GCTTAACTTTATAACCTCAA+TGG | + | chr2_1:46875516-46875535 | None:intergenic | 30.0% | |
| TAAAATCATGGTTGTCAATG+TGG | - | chr2_1:46875707-46875726 | Msa0209290:intron | 30.0% | |
| TCAATAGGTGTATTCTTTAG+AGG | - | chr2_1:46875830-46875849 | Msa0209290:intron | 30.0% | |
| ! | TGATTATGCGTGTAATTTTC+GGG | - | chr2_1:46875910-46875929 | Msa0209290:intron | 30.0% |
| ! | GAGTTCTCGTGTTATTATTT+GGG | - | chr2_1:46875943-46875962 | Msa0209290:intron | 30.0% |
| ! | TGAAACTATCTCTTCCATTT+TGG | + | chr2_1:46876375-46876394 | None:intergenic | 30.0% |
| CATTCTTATTGTAAAAGGGA+AGG | + | chr2_1:46876450-46876469 | None:intergenic | 30.0% | |
| !!! | TGAACTTTTTGACTTGTGAT+AGG | - | chr2_1:46876899-46876918 | Msa0209290:intron | 30.0% |
| CCCAAATAATTATGCTAACT+AGG | - | chr2_1:46876942-46876961 | Msa0209290:intron | 30.0% | |
| CCCTAGTTAGCATAATTATT+TGG | + | chr2_1:46876946-46876965 | None:intergenic | 30.0% | |
| AGCAACTTAGTTGTAAAAAG+AGG | - | chr2_1:46877008-46877027 | Msa0209290:intron | 30.0% | |
| GCAACTTAGTTGTAAAAAGA+GGG | - | chr2_1:46877009-46877028 | Msa0209290:intron | 30.0% | |
| !!! | TAGTTCTGCAATTTTTGGTT+AGG | - | chr2_1:46877047-46877066 | Msa0209290:intron | 30.0% |
| GACATAGTTATCTTTACTTC+AGG | - | chr2_1:46877088-46877107 | Msa0209290:intron | 30.0% | |
| !! | TTTTTGGTCAAATAGCCTAA+TGG | - | chr2_1:46877207-46877226 | Msa0209290:intron | 30.0% |
| ! | GCTAGAAATTCACCTTTTTA+AGG | - | chr2_1:46877229-46877248 | Msa0209290:intron | 30.0% |
| !!! | ACCTTTTTAAGGTGAATAAG+TGG | - | chr2_1:46877240-46877259 | Msa0209290:intron | 30.0% |
| !!! | CCTTTTTAAGGTGAATAAGT+GGG | - | chr2_1:46877241-46877260 | Msa0209290:intron | 30.0% |
| !!! | CTTTTTAAGGTGAATAAGTG+GGG | - | chr2_1:46877242-46877261 | Msa0209290:intron | 30.0% |
| ACATTGCATAATATATGCAG+GGG | + | chr2_1:46877289-46877308 | None:intergenic | 30.0% | |
| GACATTGCATAATATATGCA+GGG | + | chr2_1:46877290-46877309 | None:intergenic | 30.0% | |
| GAGTTAAAGAGAAATAGTGA+TGG | + | chr2_1:46877342-46877361 | None:intergenic | 30.0% | |
| GAGATACGTAAAACTTCAAA+CGG | - | chr2_1:46877935-46877954 | Msa0209290:CDS | 30.0% | |
| TAAAACTTCAAACGGATAAC+AGG | - | chr2_1:46877943-46877962 | Msa0209290:CDS | 30.0% | |
| AATGCCAATTTGATGCTTTA+CGG | - | chr2_1:46877966-46877985 | Msa0209290:intron | 30.0% | |
| !!! | TAACTCTCTTTTTTTGCAGT+TGG | - | chr2_1:46878034-46878053 | Msa0209290:intron | 30.0% |
| TTTGTGTGATGCAGATTAAA+TGG | - | chr2_1:46878203-46878222 | Msa0209290:intron | 30.0% | |
| AAGTTGAAGACAATAATCAG+AGG | + | chr2_1:46878316-46878335 | None:intergenic | 30.0% | |
| ACTCCAAGCATTACTAAATA+TGG | + | chr2_1:46878441-46878460 | None:intergenic | 30.0% | |
| AACAAACACAGAAAATATGC+TGG | - | chr2_1:46878938-46878957 | Msa0209290:intron | 30.0% | |
| ACATAACTAAAAGGTTAGAC+AGG | + | chr2_1:46879047-46879066 | None:intergenic | 30.0% | |
| AAAATTGAACGTATGGGTAT+GGG | + | chr2_1:46879501-46879520 | None:intergenic | 30.0% | |
| AAAAATTGAACGTATGGGTA+TGG | + | chr2_1:46879502-46879521 | None:intergenic | 30.0% | |
| TTTCAATTCTGATATGTGTG+TGG | - | chr2_1:46879680-46879699 | Msa0209290:intron | 30.0% | |
| ATATGGACATACTTTGAACA+TGG | + | chr2_1:46879849-46879868 | None:intergenic | 30.0% | |
| TTTCCATGACACATCAAAAT+GGG | + | chr2_1:46880007-46880026 | None:intergenic | 30.0% | |
| ! | TTTTCCATGACACATCAAAA+TGG | + | chr2_1:46880008-46880027 | None:intergenic | 30.0% |
| !! | ATTTTGATGTGTCATGGAAA+AGG | - | chr2_1:46880007-46880026 | Msa0209290:intron | 30.0% |
| AGGTGATTTAATGTAAATGG+TGG | - | chr2_1:46880492-46880511 | Msa0209290:intron | 30.0% | |
| ! | TATTATTTCAGGTGATGATG+TGG | - | chr2_1:46880532-46880551 | Msa0209290:intron | 30.0% |
| !! | GTTTGGTTCTTACACATTAT+AGG | - | chr2_1:46880715-46880734 | Msa0209290:intron | 30.0% |
| CGTAAATCATGATTGTTAGA+TGG | - | chr2_1:46881069-46881088 | Msa0209290:intron | 30.0% | |
| GTTTCGACTTTCTACCTTAA+TGG | + | chr2_1:46875087-46875106 | None:intergenic | 35.0% | |
| AGATGAGATTTGAACTATGG+AGG | - | chr2_1:46875337-46875356 | Msa0209290:three_prime_UTR | 35.0% | |
| !! | ATAATCATAGGTGTTGGTGT+CGG | + | chr2_1:46875420-46875439 | None:intergenic | 35.0% |
| GTCAGTATAATCATAGGTGT+TGG | + | chr2_1:46875426-46875445 | None:intergenic | 35.0% | |
| TCAAATCCTAACATGGACAT+TGG | + | chr2_1:46875486-46875505 | None:intergenic | 35.0% | |
| !!! | GTAATTTTCGGGTGTAACTT+CGG | - | chr2_1:46875921-46875940 | Msa0209290:intron | 35.0% |
| ! | GGAGTTCTCGTGTTATTATT+TGG | - | chr2_1:46875942-46875961 | Msa0209290:intron | 35.0% |
| !!! | GGATGACTGTTGTTTTTATC+AGG | - | chr2_1:46875978-46875997 | Msa0209290:intron | 35.0% |
| !!! | TGACTGTTGTTTTTATCAGG+TGG | - | chr2_1:46875981-46876000 | Msa0209290:intron | 35.0% |
| AACACCAAGCAACTATAGTT+TGG | - | chr2_1:46876063-46876082 | Msa0209290:intron | 35.0% | |
| ATAGGTAATGTCATATCACC+TGG | + | chr2_1:46876114-46876133 | None:intergenic | 35.0% | |
| TTTCAAGACAGAAACCAAAC+AGG | - | chr2_1:46876390-46876409 | Msa0209290:CDS | 35.0% | |
| ACACAAGATGTTCTATTGCA+TGG | + | chr2_1:46876511-46876530 | None:intergenic | 35.0% | |
| CTAAGACACGCTTGTAAAAT+GGG | + | chr2_1:46876579-46876598 | None:intergenic | 35.0% | |
| AAGAAAAAAGTTTGCACGAG+AGG | - | chr2_1:46876663-46876682 | Msa0209290:intron | 35.0% | |
| AAGAAAAATGACAAGTGACC+AGG | - | chr2_1:46876715-46876734 | Msa0209290:intron | 35.0% | |
| ! | ATTTCTCTCTGGTTTACAGT+AGG | - | chr2_1:46876788-46876807 | Msa0209290:intron | 35.0% |
| TGGTTTACAGTAGGTTAATC+AGG | - | chr2_1:46876797-46876816 | Msa0209290:intron | 35.0% | |
| !!! | ATTTTTGGTTAGGACCTTAG+AGG | - | chr2_1:46877057-46877076 | Msa0209290:intron | 35.0% |
| TATGTCTTCTCAAACCTCTA+AGG | + | chr2_1:46877074-46877093 | None:intergenic | 35.0% | |
| !! | AAGGTGAATTTCTAGCCATT+AGG | + | chr2_1:46877225-46877244 | None:intergenic | 35.0% |
| CCCACTTATTCACCTTAAAA+AGG | + | chr2_1:46877244-46877263 | None:intergenic | 35.0% | |
| GGACATTGCATAATATATGC+AGG | + | chr2_1:46877291-46877310 | None:intergenic | 35.0% | |
| !! | ATTGGCTCTACCTCAAATTT+AGG | + | chr2_1:46877385-46877404 | None:intergenic | 35.0% |
| GGATATAAATGAAGCTCACA+TGG | - | chr2_1:46877411-46877430 | Msa0209290:intron | 35.0% | |
| TATAAATGAAGCTCACATGG+TGG | - | chr2_1:46877414-46877433 | Msa0209290:intron | 35.0% | |
| ATAAATGAAGCTCACATGGT+GGG | - | chr2_1:46877415-46877434 | Msa0209290:intron | 35.0% | |
| TTAGGAAGCAGCTATATACT+AGG | + | chr2_1:46877462-46877481 | None:intergenic | 35.0% | |
| GGCTGTAGTTATTGTGTATT+AGG | + | chr2_1:46877480-46877499 | None:intergenic | 35.0% | |
| !! | CATATCACCTTTTGAGGAAA+AGG | + | chr2_1:46877562-46877581 | None:intergenic | 35.0% |
| ! | GAATTTTCAGATTTCCTCCA+TGG | - | chr2_1:46877641-46877660 | Msa0209290:intron | 35.0% |
| ! | TTGGGAATCAAACTAGTTCT+CGG | + | chr2_1:46877679-46877698 | None:intergenic | 35.0% |
| GATAGTGACTATTGCTTACA+AGG | - | chr2_1:46877761-46877780 | Msa0209290:intron | 35.0% | |
| TGCATTTGATTAGAAACAGC+AGG | + | chr2_1:46877901-46877920 | None:intergenic | 35.0% | |
| !!! | TTACGGTGGTTTTAATGTTG+TGG | - | chr2_1:46877983-46878002 | Msa0209290:intron | 35.0% |
| ATCTGCATCACACAAATCAA+CGG | + | chr2_1:46878199-46878218 | None:intergenic | 35.0% | |
| AAGCCACCAAATAAAGACAT+TGG | + | chr2_1:46878253-46878272 | None:intergenic | 35.0% | |
| TCAAACATACAAGCAGTAGA+TGG | + | chr2_1:46878277-46878296 | None:intergenic | 35.0% | |
| CAAAATGCATTCAATGAACG+AGG | - | chr2_1:46878463-46878482 | Msa0209290:intron | 35.0% | |
| !!! | ATGTCTTTTAGGGTTTGATG+TGG | - | chr2_1:46878551-46878570 | Msa0209290:intron | 35.0% |
| ATCCAAACCTTCTAGATCAT+CGG | + | chr2_1:46878598-46878617 | None:intergenic | 35.0% | |
| TCTGACGTAATTCGTATTTG+TGG | - | chr2_1:46878702-46878721 | Msa0209290:intron | 35.0% | |
| TCTAACACTCACTCTCTTAT+TGG | - | chr2_1:46878751-46878770 | Msa0209290:intron | 35.0% | |
| CTAACACTCACTCTCTTATT+GGG | - | chr2_1:46878752-46878771 | Msa0209290:intron | 35.0% | |
| TTATTGGGTGAAATCCATGT+GGG | - | chr2_1:46878767-46878786 | Msa0209290:intron | 35.0% | |
| ATCTAACACTCTCTCCAATT+GGG | + | chr2_1:46878848-46878867 | None:intergenic | 35.0% | |
| TATCTAACACTCTCTCCAAT+TGG | + | chr2_1:46878849-46878868 | None:intergenic | 35.0% | |
| AATGGTATGGGTACGAAATA+CGG | + | chr2_1:46879533-46879552 | None:intergenic | 35.0% | |
| TTTCGTACCCATACCATTAT+TGG | - | chr2_1:46879535-46879554 | Msa0209290:intron | 35.0% | |
| TTCGTACCCATACCATTATT+GGG | - | chr2_1:46879536-46879555 | Msa0209290:intron | 35.0% | |
| ATGATGCATAGGTACAAGTA+CGG | + | chr2_1:46879564-46879583 | None:intergenic | 35.0% | |
| TACTTGTACCTATGCATCAT+AGG | - | chr2_1:46879564-46879583 | Msa0209290:intron | 35.0% | |
| AGGATTTACCTATGATGCAT+AGG | + | chr2_1:46879575-46879594 | None:intergenic | 35.0% | |
| TCCTCAATTTCAGATGATGT+TGG | - | chr2_1:46879591-46879610 | Msa0209290:intron | 35.0% | |
| ! | TCCAACATCATCTGAAATTG+AGG | + | chr2_1:46879595-46879614 | None:intergenic | 35.0% |
| CAATTTCAGATGATGTTGGA+AGG | - | chr2_1:46879595-46879614 | Msa0209290:intron | 35.0% | |
| TGATGCGCTGAAGTAAAATA+TGG | + | chr2_1:46879866-46879885 | None:intergenic | 35.0% | |
| ACCTTGAGTAACAAGTTACA+AGG | - | chr2_1:46879947-46879966 | Msa0209290:intron | 35.0% | |
| CCTTGAGTAACAAGTTACAA+GGG | - | chr2_1:46879948-46879967 | Msa0209290:intron | 35.0% | |
| CTTGAGTAACAAGTTACAAG+GGG | - | chr2_1:46879949-46879968 | Msa0209290:intron | 35.0% | |
| ATGACACATCAAAATGGGAA+AGG | + | chr2_1:46880002-46880021 | None:intergenic | 35.0% | |
| !! | TTTCCCATTTTGATGTGTCA+TGG | - | chr2_1:46880001-46880020 | Msa0209290:intron | 35.0% |
| GGTAAGTGAGATATCAAGAT+TGG | - | chr2_1:46880090-46880109 | Msa0209290:CDS | 35.0% | |
| TGTTCATCTCTACATGTTGT+TGG | + | chr2_1:46880188-46880207 | None:intergenic | 35.0% | |
| !! | GATTAATCACGTTTAGCTTG+TGG | - | chr2_1:46880220-46880239 | Msa0209290:intron | 35.0% |
| GGCTAATAAAGTTCAGTAGA+CGG | - | chr2_1:46880241-46880260 | Msa0209290:intron | 35.0% | |
| ! | TTTTTGCTGCCATGAAACAT+AGG | - | chr2_1:46880472-46880491 | Msa0209290:intron | 35.0% |
| GATTTCTCACCAAACTTGTA+GGG | + | chr2_1:46880560-46880579 | None:intergenic | 35.0% | |
| TGATTTCTCACCAAACTTGT+AGG | + | chr2_1:46880561-46880580 | None:intergenic | 35.0% | |
| GTTCTTACACATTATAGGCT+TGG | - | chr2_1:46880720-46880739 | Msa0209290:intron | 35.0% | |
| !! | TTTCTTCTGGAATTGTGTAG+TGG | + | chr2_1:46880746-46880765 | None:intergenic | 35.0% |
| CTACACAATTCCAGAAGAAA+CGG | - | chr2_1:46880746-46880765 | Msa0209290:intron | 35.0% | |
| TGCTTGGCTAACATCAAAAT+TGG | - | chr2_1:46880779-46880798 | Msa0209290:intron | 35.0% | |
| GCTTGGCTAACATCAAAATT+GGG | - | chr2_1:46880780-46880799 | Msa0209290:intron | 35.0% | |
| CTTTCTTGCTAAAGCTAACT+AGG | + | chr2_1:46880823-46880842 | None:intergenic | 35.0% | |
| !! | CTAGTTAGCTTTAGCAAGAA+AGG | - | chr2_1:46880821-46880840 | Msa0209290:intron | 35.0% |
| CATGATTGTTAGATGGAGAT+TGG | - | chr2_1:46881076-46881095 | Msa0209290:intron | 35.0% | |
| ATTGTTAGATGGAGATTGGA+TGG | - | chr2_1:46881080-46881099 | Msa0209290:intron | 35.0% | |
| TTTGGAGAACTAAACGGTAT+CGG | + | chr2_1:46881150-46881169 | None:intergenic | 35.0% | |
| !!! | ACTAACGCTTTTTCCAACTC+AGG | + | chr2_1:46875389-46875408 | None:intergenic | 40.0% |
| CAAACCATATGACATGTCAG+TGG | + | chr2_1:46875544-46875563 | None:intergenic | 40.0% | |
| ACTTTCTCTCTCTACTGCTT+TGG | - | chr2_1:46875656-46875675 | Msa0209290:intron | 40.0% | |
| !! | CAGCTTTAAGACTGCTCAAT+AGG | - | chr2_1:46875815-46875834 | Msa0209290:intron | 40.0% |
| ! | TTATTTGGGATCTCTTACGG+TGG | - | chr2_1:46875957-46875976 | Msa0209290:intron | 40.0% |
| TTGGAAGAACCTATGTAGTC+AGG | - | chr2_1:46876030-46876049 | Msa0209290:intron | 40.0% | |
| !! | GTTGCTTGGTGTTTACCTTT+AGG | + | chr2_1:46876056-46876075 | None:intergenic | 40.0% |
| GCAACCAAACTATAGTTGCT+TGG | + | chr2_1:46876070-46876089 | None:intergenic | 40.0% | |
| GCAACTATAGTTTGGTTGCA+CGG | - | chr2_1:46876071-46876090 | Msa0209290:intron | 40.0% | |
| TTCTCCACCTCATAACTTAC+TGG | - | chr2_1:46876268-46876287 | Msa0209290:intron | 40.0% | |
| TTCACCAGTAAGTTATGAGG+TGG | + | chr2_1:46876275-46876294 | None:intergenic | 40.0% | |
| CCTTTCACCAGTAAGTTATG+AGG | + | chr2_1:46876278-46876297 | None:intergenic | 40.0% | |
| CCTCATAACTTACTGGTGAA+AGG | - | chr2_1:46876275-46876294 | Msa0209290:intron | 40.0% | |
| !! | TTTGATTTGTGGGGCCAAAA+TGG | - | chr2_1:46876358-46876377 | Msa0209290:CDS | 40.0% |
| GACAGATATGAAAGCCTGTT+TGG | + | chr2_1:46876407-46876426 | None:intergenic | 40.0% | |
| CCTAAGACACGCTTGTAAAA+TGG | + | chr2_1:46876580-46876599 | None:intergenic | 40.0% | |
| ! | CCATTTTACAAGCGTGTCTT+AGG | - | chr2_1:46876577-46876596 | Msa0209290:intron | 40.0% |
| TTACAAGCGTGTCTTAGGAT+AGG | - | chr2_1:46876582-46876601 | Msa0209290:intron | 40.0% | |
| TACAAGCGTGTCTTAGGATA+GGG | - | chr2_1:46876583-46876602 | Msa0209290:intron | 40.0% | |
| TGTCTTAGGATAGGGAAAAG+AGG | - | chr2_1:46876591-46876610 | Msa0209290:intron | 40.0% | |
| GTCTTAGGATAGGGAAAAGA+GGG | - | chr2_1:46876592-46876611 | Msa0209290:intron | 40.0% | |
| AGAGGGAAAGAGAAGGATAA+TGG | - | chr2_1:46876609-46876628 | Msa0209290:intron | 40.0% | |
| GAGGGAAAGAGAAGGATAAT+GGG | - | chr2_1:46876610-46876629 | Msa0209290:intron | 40.0% | |
| AAAGTTTGCACGAGAGGATT+TGG | - | chr2_1:46876669-46876688 | Msa0209290:intron | 40.0% | |
| !! | GAGAGGATTTGGTTTGAAGA+GGG | - | chr2_1:46876680-46876699 | Msa0209290:intron | 40.0% |
| !! | ATTTGGTTTGAAGAGGGAGT+TGG | - | chr2_1:46876686-46876705 | Msa0209290:intron | 40.0% |
| ATGCATGATTCATGCTAGGA+GGG | - | chr2_1:46876755-46876774 | Msa0209290:intron | 40.0% | |
| GGTATGAGATGATTTCTCTC+TGG | - | chr2_1:46876777-46876796 | Msa0209290:intron | 40.0% | |
| AGTAGGTTAATCAGGTTTCG+AGG | - | chr2_1:46876805-46876824 | Msa0209290:intron | 40.0% | |
| AATATAACACCAGCAGCATG+AGG | + | chr2_1:46876846-46876865 | None:intergenic | 40.0% | |
| !! | TTGTGATAGGACACTGACTT+TGG | - | chr2_1:46876912-46876931 | Msa0209290:intron | 40.0% |
| !! | TGTGATAGGACACTGACTTT+GGG | - | chr2_1:46876913-46876932 | Msa0209290:intron | 40.0% |
| TAACAAAAGAAAGCCCCTGT+AGG | + | chr2_1:46877136-46877155 | None:intergenic | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | + | chr2_1:46877312-46877331 | None:intergenic | 40.0% |
| TACCAACTGAGTTAAGCTCA+CGG | - | chr2_1:46877312-46877331 | Msa0209290:intron | 40.0% | |
| GTCTTACCTGCCTAAATTTG+AGG | - | chr2_1:46877372-46877391 | Msa0209290:intron | 40.0% | |
| TAAATGAAGCTCACATGGTG+GGG | - | chr2_1:46877416-46877435 | Msa0209290:intron | 40.0% | |
| ACTAGGTTGCAGTTATGTAC+TGG | + | chr2_1:46877445-46877464 | None:intergenic | 40.0% | |
| ! | GAAAAGGTGATGCTTTTGTG+AGG | + | chr2_1:46877546-46877565 | None:intergenic | 40.0% |
| ! | AGCATCACCTTTTCCTCAAA+AGG | - | chr2_1:46877552-46877571 | Msa0209290:CDS | 40.0% |
| CATGATAGTTGCAATGCAAC+CGG | - | chr2_1:46877595-46877614 | Msa0209290:CDS | 40.0% | |
| TCCCTAGTGGCTTCAAAATT+CGG | - | chr2_1:46877619-46877638 | Msa0209290:intron | 40.0% | |
| !!! | TCCGAATTTTGAAGCCACTA+GGG | + | chr2_1:46877623-46877642 | None:intergenic | 40.0% |
| !!! | TTCCGAATTTTGAAGCCACT+AGG | + | chr2_1:46877624-46877643 | None:intergenic | 40.0% |
| ! | TTTTCAGATTTCCTCCATGG+TGG | - | chr2_1:46877644-46877663 | Msa0209290:intron | 40.0% |
| ! | CAAACTAGTTCTCGGAGTAA+TGG | + | chr2_1:46877671-46877690 | None:intergenic | 40.0% |
| ! | ACCACCGTAAAGCATCAAAT+TGG | + | chr2_1:46877973-46877992 | None:intergenic | 40.0% |
| CTCTTCCTCTTCCAAATGTA+AGG | - | chr2_1:46878073-46878092 | Msa0209290:intron | 40.0% | |
| CAAAGTCGTGTCCTTACATT+TGG | + | chr2_1:46878087-46878106 | None:intergenic | 40.0% | |
| AAGGACACGACTTTGATTGT+TGG | - | chr2_1:46878092-46878111 | Msa0209290:intron | 40.0% | |
| AATAAAGACATTGGCCGAGT+TGG | + | chr2_1:46878244-46878263 | None:intergenic | 40.0% | |
| ACTCGGCCAATGTCTTTATT+TGG | - | chr2_1:46878244-46878263 | Msa0209290:intron | 40.0% | |
| ! | ACTGCGACTCTATGTCTTTT+AGG | - | chr2_1:46878540-46878559 | Msa0209290:intron | 40.0% |
| ! | CTGCGACTCTATGTCTTTTA+GGG | - | chr2_1:46878541-46878560 | Msa0209290:intron | 40.0% |
| TCCAAACCTTCTAGATCATC+GGG | + | chr2_1:46878597-46878616 | None:intergenic | 40.0% | |
| GGGTTCTGTAGACAACAAAT+TGG | + | chr2_1:46878640-46878659 | None:intergenic | 40.0% | |
| GTAAGAAACCTACTGTCTGT+GGG | + | chr2_1:46878660-46878679 | None:intergenic | 40.0% | |
| CTTATTGGGTGAAATCCATG+TGG | - | chr2_1:46878766-46878785 | Msa0209290:intron | 40.0% | |
| ! | TGGGTACCATACTTTGGAAA+TGG | - | chr2_1:46878786-46878805 | Msa0209290:intron | 40.0% |
| ! | GGGTACCATACTTTGGAAAT+GGG | - | chr2_1:46878787-46878806 | Msa0209290:intron | 40.0% |
| GAAATGGGTCCCAAATAAAG+TGG | - | chr2_1:46878802-46878821 | Msa0209290:intron | 40.0% | |
| ! | TGGGTCTCACCACTTTATTT+GGG | + | chr2_1:46878814-46878833 | None:intergenic | 40.0% |
| CTTATCTCGGGTATTTACCA+CGG | - | chr2_1:46879018-46879037 | Msa0209290:intron | 40.0% | |
| TGTGAATCCCTCTTAAGCAT+GGG | - | chr2_1:46879170-46879189 | Msa0209290:intron | 40.0% | |
| AAGCATGGGTACTCCTAAAA+TGG | - | chr2_1:46879184-46879203 | Msa0209290:intron | 40.0% | |
| ! | TACGGGTACTTCACCATTTT+AGG | + | chr2_1:46879200-46879219 | None:intergenic | 40.0% |
| !! | GATGAAAATAGTGGATTCGC+TGG | - | chr2_1:46879341-46879360 | Msa0209290:intron | 40.0% |
| GAAGCATGATGATAGATGTG+TGG | - | chr2_1:46879383-46879402 | Msa0209290:intron | 40.0% | |
| TAGATGTGTGGTTAAACACG+TGG | - | chr2_1:46879395-46879414 | Msa0209290:intron | 40.0% | |
| ACGGTACCCAATAATGGTAT+GGG | + | chr2_1:46879545-46879564 | None:intergenic | 40.0% | |
| TACGGTACCCAATAATGGTA+TGG | + | chr2_1:46879546-46879565 | None:intergenic | 40.0% | |
| ACAAGTACGGTACCCAATAA+TGG | + | chr2_1:46879551-46879570 | None:intergenic | 40.0% | |
| AAAGCAGGATGCAGAGTAAA+GGG | + | chr2_1:46879751-46879770 | None:intergenic | 40.0% | |
| TAAAGCAGGATGCAGAGTAA+AGG | + | chr2_1:46879752-46879771 | None:intergenic | 40.0% | |
| !! | CCCTTGTAACTTGTTACTCA+AGG | + | chr2_1:46879951-46879970 | None:intergenic | 40.0% |
| GCTTAATTGAGCCCAGTTAA+TGG | + | chr2_1:46880128-46880147 | None:intergenic | 40.0% | |
| ! | TCGAAGTGCTTGACTTCTAA+TGG | - | chr2_1:46880581-46880600 | Msa0209290:intron | 40.0% |
| AACATCAAAATTGGGCCTTG+AGG | - | chr2_1:46880788-46880807 | Msa0209290:intron | 40.0% | |
| ACATCAAAATTGGGCCTTGA+GGG | - | chr2_1:46880789-46880808 | Msa0209290:intron | 40.0% | |
| ATATTTGTGGGCGAGTACAT+TGG | - | chr2_1:46880906-46880925 | Msa0209290:intron | 40.0% | |
| TATTTGTGGGCGAGTACATT+GGG | - | chr2_1:46880907-46880926 | Msa0209290:intron | 40.0% | |
| ! | TTTTGTGACAGCAGACAATC+TGG | + | chr2_1:46881032-46881051 | None:intergenic | 40.0% |
| ACAGTTAAGAAGACAACGCG+CGG | - | chr2_1:46875036-46875055 | Msa0209290:three_prime_UTR | 45.0% | |
| CGACTTTCTACCTTAATGGC+CGG | + | chr2_1:46875083-46875102 | None:intergenic | 45.0% | |
| CAGTGTCCAATGTCCATGTT+AGG | - | chr2_1:46875477-46875496 | Msa0209290:intron | 45.0% | |
| CCATATGACATGTCAGTGGT+AGG | + | chr2_1:46875540-46875559 | None:intergenic | 45.0% | |
| CCTACCACTGACATGTCATA+TGG | - | chr2_1:46875537-46875556 | Msa0209290:intron | 45.0% | |
| AGCTTTGCTGCATCATCAGT+TGG | - | chr2_1:46875861-46875880 | Msa0209290:intron | 45.0% | |
| GCTGCAACAGCATATGAGTT+TGG | - | chr2_1:46876011-46876030 | Msa0209290:intron | 45.0% | |
| ACCTATGTAGTCAGGCCTAA+AGG | - | chr2_1:46876038-46876057 | Msa0209290:intron | 45.0% | |
| ACCTTTAGGCCTGACTACAT+AGG | + | chr2_1:46876042-46876061 | None:intergenic | 45.0% | |
| AGGGAAAAGAGGGAAAGAGA+AGG | - | chr2_1:46876602-46876621 | Msa0209290:intron | 45.0% | |
| !! | CGAGAGGATTTGGTTTGAAG+AGG | - | chr2_1:46876679-46876698 | Msa0209290:intron | 45.0% |
| GAGGATGCATGATTCATGCT+AGG | - | chr2_1:46876751-46876770 | Msa0209290:intron | 45.0% | |
| GATGCATGATTCATGCTAGG+AGG | - | chr2_1:46876754-46876773 | Msa0209290:intron | 45.0% | |
| TGCATGATTCATGCTAGGAG+GGG | - | chr2_1:46876756-46876775 | Msa0209290:intron | 45.0% | |
| AGGTTAATCAGGTTTCGAGG+AGG | - | chr2_1:46876808-46876827 | Msa0209290:intron | 45.0% | |
| ! | GTTCATCGCAAGTTGACAAC+AGG | + | chr2_1:46876884-46876903 | None:intergenic | 45.0% |
| TACTTCAGGGAGCTTAGCTA+TGG | - | chr2_1:46877102-46877121 | Msa0209290:intron | 45.0% | |
| ACTTCAGGGAGCTTAGCTAT+GGG | - | chr2_1:46877103-46877122 | Msa0209290:intron | 45.0% | |
| CTATGGGATTACAGCCTACA+GGG | - | chr2_1:46877119-46877138 | Msa0209290:intron | 45.0% | |
| TATGGGATTACAGCCTACAG+GGG | - | chr2_1:46877120-46877139 | Msa0209290:intron | 45.0% | |
| TGCATAATATATGCAGGGGC+CGG | + | chr2_1:46877285-46877304 | None:intergenic | 45.0% | |
| GTGAGCTTAACTCAGTTGGT+AGG | + | chr2_1:46877313-46877332 | None:intergenic | 45.0% | |
| ACCAACTGAGTTAAGCTCAC+GGG | - | chr2_1:46877313-46877332 | Msa0209290:intron | 45.0% | |
| GCTCTACCTCAAATTTAGGC+AGG | + | chr2_1:46877381-46877400 | None:intergenic | 45.0% | |
| TGAGGTAGAGCCAATGTTGA+TGG | - | chr2_1:46877390-46877409 | Msa0209290:intron | 45.0% | |
| CGGTTGCATTGCAACTATCA+TGG | + | chr2_1:46877597-46877616 | None:intergenic | 45.0% | |
| !!! | TTTTGAAGCCACTAGGGAAC+CGG | + | chr2_1:46877617-46877636 | None:intergenic | 45.0% |
| !! | CACGACAGGATATCGACTTT+GGG | + | chr2_1:46877697-46877716 | None:intergenic | 45.0% |
| !! | TCACGACAGGATATCGACTT+TGG | + | chr2_1:46877698-46877717 | None:intergenic | 45.0% |
| TCCGCTAAACACTGCAATAG+CGG | - | chr2_1:46877719-46877738 | Msa0209290:intron | 45.0% | |
| ACCGCTATTGCAGTGTTTAG+CGG | + | chr2_1:46877723-46877742 | None:intergenic | 45.0% | |
| GCCAATTTGATGCTTTACGG+TGG | - | chr2_1:46877969-46877988 | Msa0209290:intron | 45.0% | |
| CGTGTCCTTACATTTGGAAG+AGG | + | chr2_1:46878081-46878100 | None:intergenic | 45.0% | |
| GACACGACTTTGATTGTTGG+AGG | - | chr2_1:46878095-46878114 | Msa0209290:intron | 45.0% | |
| TATGTCCAACTGCTCCAACT+CGG | - | chr2_1:46878227-46878246 | Msa0209290:intron | 45.0% | |
| ! | CGGCCAATGTCTTTATTTGG+TGG | - | chr2_1:46878247-46878266 | Msa0209290:intron | 45.0% |
| TCCCGATGATCTAGAAGGTT+TGG | - | chr2_1:46878593-46878612 | Msa0209290:intron | 45.0% | |
| GGTAAGAAACCTACTGTCTG+TGG | + | chr2_1:46878661-46878680 | None:intergenic | 45.0% | |
| TCCATGTGGGTACCATACTT+TGG | - | chr2_1:46878780-46878799 | Msa0209290:intron | 45.0% | |
| TCCAAAGTATGGTACCCACA+TGG | + | chr2_1:46878784-46878803 | None:intergenic | 45.0% | |
| TGGGACCCATTTCCAAAGTA+TGG | + | chr2_1:46878795-46878814 | None:intergenic | 45.0% | |
| GTGGGTCTCACCACTTTATT+TGG | + | chr2_1:46878815-46878834 | None:intergenic | 45.0% | |
| CAATTGGGTGAAACTCGTGT+GGG | + | chr2_1:46878833-46878852 | None:intergenic | 45.0% | |
| AAAGGTTAGACAGGTATCCG+TGG | + | chr2_1:46879038-46879057 | None:intergenic | 45.0% | |
| GTGTGAATCCCTCTTAAGCA+TGG | - | chr2_1:46879169-46879188 | Msa0209290:intron | 45.0% | |
| !! | AGGAGTACCCATGCTTAAGA+GGG | + | chr2_1:46879180-46879199 | None:intergenic | 45.0% |
| !! | TAGGAGTACCCATGCTTAAG+AGG | + | chr2_1:46879181-46879200 | None:intergenic | 45.0% |
| ! | AAATGGTGAAGTACCCGTAC+CGG | - | chr2_1:46879201-46879220 | Msa0209290:intron | 45.0% |
| ATGTGTGTGGCAGTTAAGCT+TGG | - | chr2_1:46879693-46879712 | Msa0209290:intron | 45.0% | |
| !! | CAGTTAAGCTTGGTGTTGGA+GGG | - | chr2_1:46879703-46879722 | Msa0209290:intron | 45.0% |
| TCTGCATCCTGCTTTACTTC+CGG | - | chr2_1:46879756-46879775 | Msa0209290:intron | 45.0% | |
| ATACTTCCCGGAAGTAAAGC+AGG | + | chr2_1:46879766-46879785 | None:intergenic | 45.0% | |
| TGCTTTACTTCCGGGAAGTA+TGG | - | chr2_1:46879765-46879784 | Msa0209290:intron | 45.0% | |
| ! | GCTTTACTTCCGGGAAGTAT+GGG | - | chr2_1:46879766-46879785 | Msa0209290:intron | 45.0% |
| ATTGCCATTCCCATACTTCC+CGG | + | chr2_1:46879778-46879797 | None:intergenic | 45.0% | |
| ACCAACAGCTGCACTTATGT+TGG | + | chr2_1:46879811-46879830 | None:intergenic | 45.0% | |
| !! | AGTGCAGCTGTTGGTTTAAG+TGG | - | chr2_1:46879816-46879835 | Msa0209290:intron | 45.0% |
| GATGTGGTTCCCTACAAGTT+TGG | - | chr2_1:46880548-46880567 | Msa0209290:intron | 45.0% | |
| CAAACATCGTCCGTTTCTTC+TGG | + | chr2_1:46880759-46880778 | None:intergenic | 45.0% | |
| AAACGGACGATGTTTGTGCT+TGG | - | chr2_1:46880763-46880782 | Msa0209290:intron | 45.0% | |
| ATTTGTGGGCGAGTACATTG+GGG | - | chr2_1:46880908-46880927 | Msa0209290:intron | 45.0% | |
| !! | GTACATTGGGGGTATTGGTT+AGG | - | chr2_1:46880920-46880939 | Msa0209290:intron | 45.0% |
| TATGGAGGACAGACACTCCT+CGG | - | chr2_1:46875352-46875371 | Msa0209290:exon | 50.0% | |
| GGATTAGGTGTGTCCTGAGT+TGG | - | chr2_1:46875373-46875392 | Msa0209290:CDS | 50.0% | |
| !! | ATAGGTGTTGGTGTCGGAGT+TGG | + | chr2_1:46875414-46875433 | None:intergenic | 50.0% |
| ATAGTTTGGTTGCACGGCCT+CGG | - | chr2_1:46876077-46876096 | Msa0209290:intron | 50.0% | |
| ! | AAGTGACCAGGTGAGAGTGT+GGG | - | chr2_1:46876727-46876746 | Msa0209290:intron | 50.0% |
| ACACCAGCAGCATGAGGAAA+AGG | + | chr2_1:46876840-46876859 | None:intergenic | 50.0% | |
| GCTATGGGATTACAGCCTAC+AGG | - | chr2_1:46877118-46877137 | Msa0209290:intron | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | - | chr2_1:46877249-46877268 | Msa0209290:intron | 50.0% |
| CATAATATATGCAGGGGCCG+GGG | + | chr2_1:46877283-46877302 | None:intergenic | 50.0% | |
| GCATAATATATGCAGGGGCC+GGG | + | chr2_1:46877284-46877303 | None:intergenic | 50.0% | |
| CCAACTGAGTTAAGCTCACG+GGG | - | chr2_1:46877314-46877333 | Msa0209290:intron | 50.0% | |
| !! | ACAGCAGGAGAAGCATCAAG+TGG | + | chr2_1:46877886-46877905 | None:intergenic | 50.0% |
| GAAGCTCCCGATGATCTAGA+AGG | - | chr2_1:46878588-46878607 | Msa0209290:intron | 50.0% | |
| CTACAGAACCCACAGACAGT+AGG | - | chr2_1:46878649-46878668 | Msa0209290:intron | 50.0% | |
| CCAATTGGGTGAAACTCGTG+TGG | + | chr2_1:46878834-46878853 | None:intergenic | 50.0% | |
| CCACACGAGTTTCACCCAAT+TGG | - | chr2_1:46878831-46878850 | Msa0209290:intron | 50.0% | |
| ! | AATGGTGAAGTACCCGTACC+GGG | - | chr2_1:46879202-46879221 | Msa0209290:intron | 50.0% |
| TACTATGCCAGTACCCGGTA+CGG | + | chr2_1:46879218-46879237 | None:intergenic | 50.0% | |
| GCAAGTACTATGCCAGTACC+CGG | + | chr2_1:46879223-46879242 | None:intergenic | 50.0% | |
| !! | GTGGCAGTTAAGCTTGGTGT+TGG | - | chr2_1:46879699-46879718 | Msa0209290:intron | 50.0% |
| !! | GCAGTTAAGCTTGGTGTTGG+AGG | - | chr2_1:46879702-46879721 | Msa0209290:intron | 50.0% |
| ! | TGGTGTTGGAGGGTTTAGCA+TGG | - | chr2_1:46879713-46879732 | Msa0209290:intron | 50.0% |
| ! | GGTGTTGGAGGGTTTAGCAT+GGG | - | chr2_1:46879714-46879733 | Msa0209290:intron | 50.0% |
| CTGCATCCTGCTTTACTTCC+GGG | - | chr2_1:46879757-46879776 | Msa0209290:intron | 50.0% | |
| ! | ACTTCCGGGAAGTATGGGAA+TGG | - | chr2_1:46879771-46879790 | Msa0209290:intron | 50.0% |
| ACAGCTGCACTTATGTTGGC+TGG | + | chr2_1:46879807-46879826 | None:intergenic | 50.0% | |
| GCCAACATAAGTGCAGCTGT+TGG | - | chr2_1:46879807-46879826 | Msa0209290:intron | 50.0% | |
| !! | CAGCTGTTGGTTTAAGTGGC+TGG | - | chr2_1:46879820-46879839 | Msa0209290:intron | 50.0% |
| TTTGTGGGCGAGTACATTGG+GGG | - | chr2_1:46880909-46880928 | Msa0209290:intron | 50.0% | |
| CTTCGGAGTCTCAACACTGC+CGG | - | chr2_1:46875061-46875080 | Msa0209290:three_prime_UTR | 55.0% | |
| CTCAACACTGCCGGCCATTA+AGG | - | chr2_1:46875070-46875089 | Msa0209290:three_prime_UTR | 55.0% | |
| GGACAGACACTCCTCGGATT+AGG | - | chr2_1:46875358-46875377 | Msa0209290:exon | 55.0% | |
| CTCAGGACACACCTAATCCG+AGG | + | chr2_1:46875372-46875391 | None:intergenic | 55.0% | |
| TTGCACGGCCTCGGTGATAA+TGG | - | chr2_1:46876086-46876105 | Msa0209290:intron | 55.0% | |
| ACCTGGAGCCATTATCACCG+AGG | + | chr2_1:46876097-46876116 | None:intergenic | 55.0% | |
| CAAGTGACCAGGTGAGAGTG+TGG | - | chr2_1:46876726-46876745 | Msa0209290:intron | 55.0% | |
| ATCAGGTTTCGAGGAGGAGC+TGG | - | chr2_1:46876814-46876833 | Msa0209290:intron | 55.0% | |
| ! | TGGCCTTTTCCTCATGCTGC+TGG | - | chr2_1:46876834-46876853 | Msa0209290:intron | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | - | chr2_1:46877250-46877269 | Msa0209290:intron | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | - | chr2_1:46877251-46877270 | Msa0209290:intron | 55.0% |
| CCCCGTGAGCTTAACTCAGT+TGG | + | chr2_1:46877317-46877336 | None:intergenic | 55.0% | |
| ! | CAATGCAACCGGTTCCCTAG+TGG | - | chr2_1:46877606-46877625 | Msa0209290:CDS | 55.0% |
| !! | GGAGTAATGGACCACCATGG+AGG | + | chr2_1:46877658-46877677 | None:intergenic | 55.0% |
| !! | CTCGGAGTAATGGACCACCA+TGG | + | chr2_1:46877661-46877680 | None:intergenic | 55.0% |
| GTGTTTAGCGGAGTCACGAC+AGG | + | chr2_1:46877711-46877730 | None:intergenic | 55.0% | |
| ! | ATTGGCCGAGTTGGAGCAGT+TGG | + | chr2_1:46878235-46878254 | None:intergenic | 55.0% |
| ACTATGCCAGTACCCGGTAC+GGG | + | chr2_1:46879217-46879236 | None:intergenic | 55.0% | |
| CGTGTACGGATCGGTACGTA+TGG | + | chr2_1:46879247-46879266 | None:intergenic | 55.0% | |
| TTTCACCGCCTGCACGTGTA+CGG | + | chr2_1:46879261-46879280 | None:intergenic | 55.0% | |
| AAGGGGTAGATGAAGCCACG+AGG | - | chr2_1:46879966-46879985 | Msa0209290:intron | 55.0% | |
| ACTAGGCAGCATTGCCCTCA+AGG | + | chr2_1:46880806-46880825 | None:intergenic | 55.0% | |
| ! | GGCGAGTACATTGGGGGTAT+TGG | - | chr2_1:46880915-46880934 | Msa0209290:intron | 55.0% |
| GAAGACAACGCGCGGAGCTT+CGG | - | chr2_1:46875044-46875063 | Msa0209290:three_prime_UTR | 60.0% | |
| !! | GCCTCGGTGATAATGGCTCC+AGG | - | chr2_1:46876093-46876112 | Msa0209290:intron | 60.0% |
| ! | ACCAGGTGAGAGTGTGGGAG+AGG | - | chr2_1:46876732-46876751 | Msa0209290:intron | 60.0% |
| TCCTCTCCCACACTCTCACC+TGG | + | chr2_1:46876736-46876755 | None:intergenic | 60.0% | |
| ! | GAAGTACCCGTACCGGGTAC+TGG | - | chr2_1:46879208-46879227 | Msa0209290:intron | 60.0% |
| ! | GTACCGATCCGTACACGTGC+AGG | - | chr2_1:46879250-46879269 | Msa0209290:intron | 60.0% |
| AAAGGACTGAGCACGCCTCG+TGG | + | chr2_1:46879984-46880003 | None:intergenic | 60.0% | |
| CCGCCTGCACGTGTACGGAT+CGG | + | chr2_1:46879256-46879275 | None:intergenic | 65.0% | |
| CCGATCCGTACACGTGCAGG+CGG | - | chr2_1:46879253-46879272 | Msa0209290:intron | 65.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr2_1:46877263-46877282 | Msa0209290:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr2_1:46877271-46877290 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 46875015 | 46881180 | 46875015 | ID=Msa0209290;Name=Msa0209290 |
| chr2_1 | mRNA | 46875015 | 46881180 | 46875015 | ID=Msa0209290-mRNA-1;Parent=Msa0209290;Name=Msa0209290-mRNA-1;_AED=0.07;_eAED=0.07;_QI=117|1|1|1|0.88|0.8|10|356|255 |
| chr2_1 | exon | 46875015 | 46875458 | 46875015 | ID=Msa0209290-mRNA-1:exon:13327;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46875559 | 46875652 | 46875559 | ID=Msa0209290-mRNA-1:exon:13326;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46876167 | 46876249 | 46876167 | ID=Msa0209290-mRNA-1:exon:13325;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46876339 | 46876489 | 46876339 | ID=Msa0209290-mRNA-1:exon:13324;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46877529 | 46877633 | 46877529 | ID=Msa0209290-mRNA-1:exon:13323;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46877909 | 46877978 | 46877909 | ID=Msa0209290-mRNA-1:exon:13322;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46878106 | 46878142 | 46878106 | ID=Msa0209290-mRNA-1:exon:13321;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46880081 | 46880195 | 46880081 | ID=Msa0209290-mRNA-1:exon:13320;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46880313 | 46880377 | 46880313 | ID=Msa0209290-mRNA-1:exon:13319;Parent=Msa0209290-mRNA-1 |
| chr2_1 | exon | 46881104 | 46881180 | 46881104 | ID=Msa0209290-mRNA-1:exon:13318;Parent=Msa0209290-mRNA-1 |
| chr2_1 | five_prime_UTR | 46881104 | 46881180 | 46881104 | ID=Msa0209290-mRNA-1:five_prime_utr;Parent=Msa0209290-mRNA-1 |
| chr2_1 | five_prime_UTR | 46880338 | 46880377 | 46880338 | ID=Msa0209290-mRNA-1:five_prime_utr;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46880313 | 46880337 | 46880313 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46880081 | 46880195 | 46880081 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46878106 | 46878142 | 46878106 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46877909 | 46877978 | 46877909 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46877529 | 46877633 | 46877529 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46876339 | 46876489 | 46876339 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46876167 | 46876249 | 46876167 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46875559 | 46875652 | 46875559 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | CDS | 46875371 | 46875458 | 46875371 | ID=Msa0209290-mRNA-1:cds;Parent=Msa0209290-mRNA-1 |
| chr2_1 | three_prime_UTR | 46875015 | 46875370 | 46875015 | ID=Msa0209290-mRNA-1:three_prime_utr;Parent=Msa0209290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
