Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209710 | XP_013463924.1 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209710 | sp|Q9QYL8|LYPA2_RAT | 34.071 | 226 | 123 | 6 | 30 | 248 | 22 | 228 | 9.06e-34 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209710 | A0A072V7E9 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0209290 | Msa0209710 | 0.828249 | 9.984513e-55 | -8.615850e-47 |
| Msa0209710 | Msa0324550 | 0.808156 | 3.557334e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209710 | MtrunA17_Chr2g0306861 | 99.216 | 255 | 2 | 0 | 1 | 255 | 1 | 255 | 0.0 | 523 |
| Msa0209710 | MtrunA17_Chr3g0138041 | 72.458 | 236 | 65 | 0 | 17 | 252 | 19 | 254 | 2.81e-132 | 374 |
| Msa0209710 | MtrunA17_Chr2g0332581 | 67.717 | 254 | 80 | 1 | 1 | 252 | 1 | 254 | 8.56e-122 | 347 |
| Msa0209710 | MtrunA17_Chr4g0003791 | 66.255 | 243 | 82 | 0 | 10 | 252 | 13 | 255 | 1.95e-119 | 342 |
| Msa0209710 | MtrunA17_Chr4g0075571 | 27.632 | 228 | 134 | 7 | 32 | 248 | 4 | 211 | 3.22e-19 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209710 | AT5G20060.1 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209710 | AT5G20060.4 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209710 | AT5G20060.3 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209710 | AT5G20060.2 | 73.123 | 253 | 66 | 2 | 1 | 252 | 1 | 252 | 1.97e-141 | 397 |
| Msa0209710 | AT3G15650.2 | 62.637 | 273 | 82 | 2 | 1 | 253 | 1 | 273 | 2.67e-125 | 357 |
| Msa0209710 | AT1G52700.3 | 64.961 | 254 | 88 | 1 | 1 | 253 | 1 | 254 | 2.86e-124 | 353 |
| Msa0209710 | AT1G52700.2 | 64.961 | 254 | 88 | 1 | 1 | 253 | 1 | 254 | 2.86e-124 | 353 |
| Msa0209710 | AT1G52700.4 | 65.984 | 244 | 83 | 0 | 10 | 253 | 2 | 245 | 1.49e-122 | 349 |
| Msa0209710 | AT3G15650.1 | 67.323 | 254 | 82 | 1 | 1 | 253 | 1 | 254 | 1.86e-121 | 347 |
| Msa0209710 | AT3G15650.3 | 69.620 | 237 | 72 | 0 | 17 | 253 | 28 | 264 | 5.10e-119 | 341 |
| Msa0209710 | AT1G52700.5 | 62.376 | 202 | 76 | 0 | 52 | 253 | 1 | 202 | 5.24e-95 | 278 |
| Msa0209710 | AT1G52700.6 | 66.667 | 195 | 64 | 1 | 1 | 194 | 1 | 195 | 5.98e-95 | 277 |
| Msa0209710 | AT1G52700.1 | 66.667 | 195 | 64 | 1 | 1 | 194 | 1 | 195 | 5.98e-95 | 277 |
| Msa0209710 | AT1G51300.3 | 40.928 | 237 | 132 | 2 | 18 | 252 | 34 | 264 | 2.81e-62 | 197 |
| Msa0209710 | AT1G51300.2 | 42.308 | 208 | 112 | 2 | 18 | 223 | 34 | 235 | 3.20e-56 | 181 |
| Msa0209710 | AT1G52695.1 | 38.430 | 242 | 134 | 5 | 10 | 250 | 4 | 231 | 1.05e-48 | 160 |
| Msa0209710 | AT1G51300.1 | 46.667 | 150 | 72 | 2 | 18 | 165 | 23 | 166 | 6.14e-42 | 142 |
| Msa0209710 | AT1G47786.1 | 41.463 | 164 | 80 | 4 | 4 | 165 | 34 | 183 | 8.92e-34 | 121 |
| Msa0209710 | AT1G52470.1 | 32.794 | 247 | 144 | 4 | 3 | 248 | 1 | 226 | 1.37e-32 | 119 |
| Msa0209710 | AT1G52460.1 | 37.395 | 238 | 112 | 9 | 23 | 251 | 12 | 221 | 1.94e-32 | 119 |
| Msa0209710 | AT1G47780.1 | 48.182 | 110 | 54 | 1 | 59 | 168 | 23 | 129 | 2.91e-27 | 102 |
| Msa0209710 | AT1G52470.3 | 33.500 | 200 | 111 | 4 | 3 | 201 | 1 | 179 | 4.31e-26 | 100 |
| Msa0209710 | AT1G52470.2 | 33.679 | 193 | 106 | 4 | 3 | 194 | 1 | 172 | 5.95e-25 | 97.8 |
| Msa0209710 | AT4G22300.1 | 31.111 | 225 | 124 | 7 | 35 | 248 | 51 | 255 | 1.44e-22 | 93.6 |
| Msa0209710 | AT1G52440.1 | 31.197 | 234 | 103 | 7 | 23 | 251 | 16 | 196 | 1.37e-21 | 89.7 |
| Msa0209710 | AT4G22305.1 | 27.803 | 223 | 134 | 6 | 35 | 248 | 6 | 210 | 2.06e-18 | 81.6 |
Find 101 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAAAATAACATGTTTATT+TGG | 0.153599 | 2_1:-48740269 | None:intergenic |
| TGCTTGGCTAACATCAAAAT+TGG | 0.165141 | 2_1:+48740046 | Msa0209710:CDS |
| GTTTCGACTTTCTACCTTAA+TGG | 0.221762 | 2_1:-48734351 | None:intergenic |
| TGCTTTACTTCCGGGAAGTA+TGG | 0.226039 | 2_1:+48739032 | Msa0209710:CDS |
| CAAACATCGTCCGTTTCTTC+TGG | 0.239861 | 2_1:-48740023 | None:intergenic |
| CAAATATGAGAAGTATTTAA+TGG | 0.256093 | 2_1:+48740214 | Msa0209710:three_prime_UTR |
| ACTCGGCCAATGTCTTTATT+TGG | 0.262981 | 2_1:+48737510 | Msa0209710:CDS |
| GTTGCTTGGTGTTTACCTTT+AGG | 0.271813 | 2_1:-48735319 | None:intergenic |
| TCGAAGTGCTTGACTTCTAA+TGG | 0.272094 | 2_1:+48739848 | Msa0209710:CDS |
| TTTATTTGGAAAGTAGAAAT+AGG | 0.276465 | 2_1:-48740255 | None:intergenic |
| ATTAAATAATAATAGGAAAA+AGG | 0.282793 | 2_1:-48740141 | None:intergenic |
| GTAACTTTCAAAGCTTATAA+TGG | 0.292571 | 2_1:+48739881 | Msa0209710:CDS |
| CTCAACACTGCCGGCCATTA+AGG | 0.294584 | 2_1:+48734337 | Msa0209710:five_prime_UTR |
| TCAATAGGTGTATTCTTTAG+AGG | 0.302615 | 2_1:+48735096 | Msa0209710:five_prime_UTR |
| TCTGCATCCTGCTTTACTTC+CGG | 0.304345 | 2_1:+48739023 | Msa0209710:CDS |
| AAGGAGACAAACATATGTTT+TGG | 0.307789 | 2_1:-48740432 | None:intergenic |
| TATTTGTGGGCGAGTACATT+GGG | 0.326199 | 2_1:+48740174 | Msa0209710:three_prime_UTR |
| CAGCTTTAAGACTGCTCAAT+AGG | 0.328540 | 2_1:+48735081 | Msa0209710:intron |
| TTTGTGTGATGCAGATTAAA+TGG | 0.339269 | 2_1:+48737469 | Msa0209710:intron |
| CTGCATCCTGCTTTACTTCC+GGG | 0.350957 | 2_1:+48739024 | Msa0209710:CDS |
| TAACTTTCAAAGCTTATAAT+GGG | 0.351735 | 2_1:+48739882 | Msa0209710:CDS |
| GACTAATATTAAATAATAAT+AGG | 0.361843 | 2_1:-48740148 | None:intergenic |
| CAGCTGTTGGTTTAAGTGGC+TGG | 0.364615 | 2_1:+48739087 | Msa0209710:CDS |
| CATCTAACAATCATGATTTA+CGG | 0.368703 | 2_1:-48740335 | None:intergenic |
| TTGCACGGCCTCGGTGATAA+TGG | 0.370731 | 2_1:+48735352 | Msa0209710:CDS |
| TGATTTCTCACCAAACTTGT+AGG | 0.380140 | 2_1:-48739825 | None:intergenic |
| CTTTCTTGCTAAAGCTAACT+AGG | 0.382057 | 2_1:-48740087 | None:intergenic |
| CTAGTTAGCTTTAGCAAGAA+AGG | 0.386301 | 2_1:+48740088 | Msa0209710:exon |
| AACACCAAGCAACTATAGTT+TGG | 0.387815 | 2_1:+48735329 | Msa0209710:CDS |
| CATGATTGTTAGATGGAGAT+TGG | 0.397270 | 2_1:+48740343 | Msa0209710:three_prime_UTR |
| ATTGCCATTCCCATACTTCC+CGG | 0.416403 | 2_1:-48739042 | None:intergenic |
| CGGCCAATGTCTTTATTTGG+TGG | 0.418435 | 2_1:+48737513 | Msa0209710:CDS |
| AATATTAGTCGCATATTTGT+GGG | 0.420399 | 2_1:+48740161 | Msa0209710:three_prime_UTR |
| GCTGCAACAGCATATGAGTT+TGG | 0.425946 | 2_1:+48735277 | Msa0209710:CDS |
| CGTAAATCATGATTGTTAGA+TGG | 0.429932 | 2_1:+48740336 | Msa0209710:three_prime_UTR |
| TCAAACATACAAGCAGTAGA+TGG | 0.440371 | 2_1:-48737540 | None:intergenic |
| TCCCGATGATCTAGAAGGTT+TGG | 0.440893 | 2_1:+48737859 | Msa0209710:CDS |
| TTTCCATGACACATCAAAAT+GGG | 0.444600 | 2_1:-48739271 | None:intergenic |
| ACATCAAAATTGGGCCTTGA+GGG | 0.445931 | 2_1:+48740056 | Msa0209710:CDS |
| AAAGCAGGATGCAGAGTAAA+GGG | 0.452204 | 2_1:-48739015 | None:intergenic |
| GGGTTCTGTAGACAACAAAT+TGG | 0.456631 | 2_1:-48737903 | None:intergenic |
| GAAGACAACGCGCGGAGCTT+CGG | 0.461410 | 2_1:+48734311 | Msa0209710:five_prime_UTR |
| TCCAAACCTTCTAGATCATC+GGG | 0.462352 | 2_1:-48737860 | None:intergenic |
| ATATTTGTGGGCGAGTACAT+TGG | 0.479607 | 2_1:+48740173 | Msa0209710:three_prime_UTR |
| GGTGTTGGAGGGTTTAGCAT+GGG | 0.479769 | 2_1:+48738981 | Msa0209710:CDS |
| ATAGTTTGGTTGCACGGCCT+CGG | 0.479960 | 2_1:+48735343 | Msa0209710:CDS |
| CAGTTAAGCTTGGTGTTGGA+GGG | 0.484354 | 2_1:+48738970 | Msa0209710:intron |
| ACCTATGTAGTCAGGCCTAA+AGG | 0.485798 | 2_1:+48735304 | Msa0209710:CDS |
| GATGTGGTTCCCTACAAGTT+TGG | 0.487511 | 2_1:+48739815 | Msa0209710:CDS |
| GCTTGGCTAACATCAAAATT+GGG | 0.487927 | 2_1:+48740047 | Msa0209710:CDS |
| TAATATTAGTCGCATATTTG+TGG | 0.488745 | 2_1:+48740160 | Msa0209710:three_prime_UTR |
| AGTGCAGCTGTTGGTTTAAG+TGG | 0.489233 | 2_1:+48739083 | Msa0209710:CDS |
| TAAAGCAGGATGCAGAGTAA+AGG | 0.489254 | 2_1:-48739016 | None:intergenic |
| ATTGGCCGAGTTGGAGCAGT+TGG | 0.490592 | 2_1:-48737498 | None:intergenic |
| GATTTCTCACCAAACTTGTA+GGG | 0.491095 | 2_1:-48739824 | None:intergenic |
| GCAGTTAAGCTTGGTGTTGG+AGG | 0.491887 | 2_1:+48738969 | Msa0209710:intron |
| ATCCAAACCTTCTAGATCAT+CGG | 0.494755 | 2_1:-48737861 | None:intergenic |
| TTGGAAGAACCTATGTAGTC+AGG | 0.494901 | 2_1:+48735296 | Msa0209710:CDS |
| ACTAGGCAGCATTGCCCTCA+AGG | 0.499385 | 2_1:-48740070 | None:intergenic |
| GTGGCAGTTAAGCTTGGTGT+TGG | 0.509868 | 2_1:+48738966 | Msa0209710:intron |
| GAAGCTCCCGATGATCTAGA+AGG | 0.514604 | 2_1:+48737854 | Msa0209710:CDS |
| ACAGCTGCACTTATGTTGGC+TGG | 0.519457 | 2_1:-48739071 | None:intergenic |
| AGCTTTGCTGCATCATCAGT+TGG | 0.519628 | 2_1:+48735127 | Msa0209710:CDS |
| ACCAACAGCTGCACTTATGT+TGG | 0.521248 | 2_1:-48739075 | None:intergenic |
| CGTGTCCTTACATTTGGAAG+AGG | 0.521764 | 2_1:-48737344 | None:intergenic |
| GCTTTACTTCCGGGAAGTAT+GGG | 0.521974 | 2_1:+48739033 | Msa0209710:CDS |
| AATAAAGACATTGGCCGAGT+TGG | 0.524082 | 2_1:-48737507 | None:intergenic |
| TGGTGTTGGAGGGTTTAGCA+TGG | 0.525161 | 2_1:+48738980 | Msa0209710:CDS |
| ACCTTGAGTAACAAGTTACA+AGG | 0.525726 | 2_1:+48739214 | Msa0209710:CDS |
| CTACACAATTCCAGAAGAAA+CGG | 0.532566 | 2_1:+48740013 | Msa0209710:CDS |
| GCCTCGGTGATAATGGCTCC+AGG | 0.537078 | 2_1:+48735359 | Msa0209710:CDS |
| AACATCAAAATTGGGCCTTG+AGG | 0.541176 | 2_1:+48740055 | Msa0209710:CDS |
| TTTGGAGAACTAAACGGTAT+CGG | 0.545261 | 2_1:-48740414 | None:intergenic |
| CCCTTGTAACTTGTTACTCA+AGG | 0.547923 | 2_1:-48739215 | None:intergenic |
| ATACTTCCCGGAAGTAAAGC+AGG | 0.551492 | 2_1:-48739030 | None:intergenic |
| ACCTTTAGGCCTGACTACAT+AGG | 0.553075 | 2_1:-48735305 | None:intergenic |
| CGACTTTCTACCTTAATGGC+CGG | 0.553624 | 2_1:-48734347 | None:intergenic |
| AAACGGACGATGTTTGTGCT+TGG | 0.557700 | 2_1:+48740030 | Msa0209710:CDS |
| GGTAAGAAACCTACTGTCTG+TGG | 0.558443 | 2_1:-48737924 | None:intergenic |
| TATTATTTCAGGTGATGATG+TGG | 0.558646 | 2_1:+48739799 | Msa0209710:intron |
| GCAACTATAGTTTGGTTGCA+CGG | 0.566413 | 2_1:+48735337 | Msa0209710:CDS |
| TTTCTTCTGGAATTGTGTAG+TGG | 0.572704 | 2_1:-48740010 | None:intergenic |
| GCAACCAAACTATAGTTGCT+TGG | 0.580548 | 2_1:-48735333 | None:intergenic |
| ATGTGTGTGGCAGTTAAGCT+TGG | 0.584859 | 2_1:+48738960 | Msa0209710:intron |
| GCCAACATAAGTGCAGCTGT+TGG | 0.585194 | 2_1:+48739074 | Msa0209710:CDS |
| ATTGTTAGATGGAGATTGGA+TGG | 0.604130 | 2_1:+48740347 | Msa0209710:three_prime_UTR |
| ACTTCCGGGAAGTATGGGAA+TGG | 0.604302 | 2_1:+48739038 | Msa0209710:CDS |
| AAGCCACCAAATAAAGACAT+TGG | 0.605790 | 2_1:-48737516 | None:intergenic |
| ATATGGACATACTTTGAACA+TGG | 0.609897 | 2_1:-48739113 | None:intergenic |
| ATTTGTGGGCGAGTACATTG+GGG | 0.619389 | 2_1:+48740175 | Msa0209710:three_prime_UTR |
| ATGACACATCAAAATGGGAA+AGG | 0.628605 | 2_1:-48739266 | None:intergenic |
| CTTCGGAGTCTCAACACTGC+CGG | 0.632675 | 2_1:+48734328 | Msa0209710:five_prime_UTR |
| GTAAGAAACCTACTGTCTGT+GGG | 0.636798 | 2_1:-48737923 | None:intergenic |
| AAAGGACTGAGCACGCCTCG+TGG | 0.645439 | 2_1:-48739248 | None:intergenic |
| CCTTGAGTAACAAGTTACAA+GGG | 0.647196 | 2_1:+48739215 | Msa0209710:CDS |
| TATGTCCAACTGCTCCAACT+CGG | 0.665947 | 2_1:+48737493 | Msa0209710:CDS |
| TTTGTGGGCGAGTACATTGG+GGG | 0.671416 | 2_1:+48740176 | Msa0209710:three_prime_UTR |
| CTTGAGTAACAAGTTACAAG+GGG | 0.675390 | 2_1:+48739216 | Msa0209710:CDS |
| AAAGTTAAGAAGACAACGCG+CGG | 0.684976 | 2_1:+48734303 | Msa0209710:five_prime_UTR |
| ACCTGGAGCCATTATCACCG+AGG | 0.734493 | 2_1:-48735360 | None:intergenic |
| AAGGGGTAGATGAAGCCACG+AGG | 0.754925 | 2_1:+48739233 | Msa0209710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTATTTATAATTTTT+CGG | - | chr2_1:48739914-48739933 | None:intergenic | 0.0% |
| !!! | ATGAACAATTTATTATTTTT+AGG | + | chr2_1:48735487-48735506 | Msa0209710:intron | 10.0% |
| !! | ATAAATTATAATTAGAGAAA+AGG | - | chr2_1:48737071-48737090 | None:intergenic | 10.0% |
| !!! | ATGTTTTCATATAATAAATT+AGG | + | chr2_1:48737612-48737631 | Msa0209710:intron | 10.0% |
| !! | ATTTACAAATATATTATTTC+AGG | + | chr2_1:48739788-48739807 | Msa0209710:intron | 10.0% |
| !! | ATTAAATAATAATAGGAAAA+AGG | - | chr2_1:48740144-48740163 | None:intergenic | 10.0% |
| !! | GACTAATATTAAATAATAAT+AGG | - | chr2_1:48740151-48740170 | None:intergenic | 10.0% |
| !! | ATTCATAATTGAAAATGAAA+AGG | - | chr2_1:48734421-48734440 | None:intergenic | 15.0% |
| !!! | TTTCATTTTCAATTATGAAT+TGG | + | chr2_1:48734421-48734440 | Msa0209710:intron | 15.0% |
| !!! | TTCATTTTCAATTATGAATT+GGG | + | chr2_1:48734422-48734441 | Msa0209710:intron | 15.0% |
| !! | AGAAAAAACAAAATATAACA+TGG | - | chr2_1:48734531-48734550 | None:intergenic | 15.0% |
| !!! | TATTTTGTTTTTTCTTTTCT+TGG | + | chr2_1:48734536-48734555 | Msa0209710:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | chr2_1:48734717-48734736 | Msa0209710:intron | 15.0% |
| !! | AAATTTGGAAAAAACAAAAT+AGG | - | chr2_1:48735398-48735417 | None:intergenic | 15.0% |
| !!! | AAAATTCTTCTATTAGTTTT+CGG | + | chr2_1:48735427-48735446 | Msa0209710:intron | 15.0% |
| !! | TAATTTATAATTATTCACGT+TGG | + | chr2_1:48735454-48735473 | Msa0209710:intron | 15.0% |
| !! | TTATAAGCAATTATTCAAAA+GGG | - | chr2_1:48735596-48735615 | None:intergenic | 15.0% |
| !! | ATTATAAGCAATTATTCAAA+AGG | - | chr2_1:48735597-48735616 | None:intergenic | 15.0% |
| !!! | TAATGTATTTATTTGATTTG+TGG | + | chr2_1:48735613-48735632 | Msa0209710:intron | 15.0% |
| !!! | AATGTATTTATTTGATTTGT+GGG | + | chr2_1:48735614-48735633 | Msa0209710:intron | 15.0% |
| !!! | CTATCTCTTTTTATATTTTT+TGG | + | chr2_1:48736457-48736476 | Msa0209710:intron | 15.0% |
| !!! | GATTCTAAAGATAAATAATT+TGG | - | chr2_1:48737406-48737425 | None:intergenic | 15.0% |
| !! | ATCTTAAAATAACCTTAAAT+TGG | + | chr2_1:48737766-48737785 | Msa0209710:intron | 15.0% |
| !!! | TTTTTTTTTTTCCTAAACAT+AGG | + | chr2_1:48738721-48738740 | Msa0209710:intron | 15.0% |
| !!! | ATTTTAAAAATTGAACGTAT+GGG | - | chr2_1:48738773-48738792 | None:intergenic | 15.0% |
| !!! | AATTTTAAAAATTGAACGTA+TGG | - | chr2_1:48738774-48738793 | None:intergenic | 15.0% |
| !!! | CAAAAAATTGACATTTTAAA+TGG | - | chr2_1:48739593-48739612 | None:intergenic | 15.0% |
| !! | TATTATTTGAACATCAATTT+CGG | - | chr2_1:48739617-48739636 | None:intergenic | 15.0% |
| !!! | TCATTTTCAATTATGAATTG+GGG | + | chr2_1:48734423-48734442 | Msa0209710:intron | 20.0% |
| !! | ATATAATTCAAATCCTAACA+TGG | - | chr2_1:48734759-48734778 | None:intergenic | 20.0% |
| !! | TAACTTTCTTTGTAAAATCA+TGG | + | chr2_1:48734961-48734980 | Msa0209710:intron | 20.0% |
| !!! | AATTTTCAGTCATACAAATT+TGG | - | chr2_1:48735413-48735432 | None:intergenic | 20.0% |
| !!! | AAATTCTTCTATTAGTTTTC+GGG | + | chr2_1:48735428-48735447 | Msa0209710:intron | 20.0% |
| !! | TATAAGCAATTATTCAAAAG+GGG | - | chr2_1:48735595-48735614 | None:intergenic | 20.0% |
| !!! | ATGTATTTATTTGATTTGTG+GGG | + | chr2_1:48735615-48735634 | Msa0209710:intron | 20.0% |
| !! | AACACATTCTTATTGTAAAA+GGG | - | chr2_1:48735720-48735739 | None:intergenic | 20.0% |
| !! | AAACACATTCTTATTGTAAA+AGG | - | chr2_1:48735721-48735740 | None:intergenic | 20.0% |
| !! | AATATAAAAAGAGATAGTGA+TGG | - | chr2_1:48736454-48736473 | None:intergenic | 20.0% |
| !! | ATAATAACGATACTAATAAG+AGG | + | chr2_1:48736773-48736792 | Msa0209710:intron | 20.0% |
| !! | AAAAAAAGAGAGTTAAATCA+GGG | - | chr2_1:48737295-48737314 | None:intergenic | 20.0% |
| !!! | TATCTTTAGAATCAATAAGA+TGG | + | chr2_1:48737413-48737432 | Msa0209710:intron | 20.0% |
| !! | TATAATAAATTAGGTGTATG+AGG | + | chr2_1:48737621-48737640 | Msa0209710:intron | 20.0% |
| !! | AATTTATCAAGACCAATTTA+AGG | - | chr2_1:48737781-48737800 | None:intergenic | 20.0% |
| !!! | TATTTTCATCAAAAGCAAAA+GGG | - | chr2_1:48738597-48738616 | None:intergenic | 20.0% |
| !!! | TTATATTTCTATTGTTGTCT+AGG | + | chr2_1:48739191-48739210 | Msa0209710:intron | 20.0% |
| !! | TGAACTTAATTAAACATATG+TGG | + | chr2_1:48739336-48739355 | Msa0209710:intron | 20.0% |
| !! | TAACTTTCAAAGCTTATAAT+GGG | + | chr2_1:48739882-48739901 | Msa0209710:CDS | 20.0% |
| !! | AAAAATTAATATGAAGCAAG+TGG | - | chr2_1:48739961-48739980 | None:intergenic | 20.0% |
| !!! | ACTTGCTTCATATTAATTTT+TGG | + | chr2_1:48739960-48739979 | Msa0209710:intron | 20.0% |
| !!! | CTTCATATTAATTTTTGGTT+TGG | + | chr2_1:48739965-48739984 | Msa0209710:intron | 20.0% |
| !!! | AGAATTCTTTTTTCACATTT+TGG | - | chr2_1:48740116-48740135 | None:intergenic | 20.0% |
| !!! | CAAATATGAGAAGTATTTAA+TGG | + | chr2_1:48740214-48740233 | Msa0209710:three_prime_UTR | 20.0% |
| !! | TTTATTTGGAAAGTAGAAAT+AGG | - | chr2_1:48740258-48740277 | None:intergenic | 20.0% |
| !! | GTCAAAATAACATGTTTATT+TGG | - | chr2_1:48740272-48740291 | None:intergenic | 20.0% |
| !! | AAAAAAAGCATGAGATTGTA+AGG | - | chr2_1:48734392-48734411 | None:intergenic | 25.0% |
| !!! | GGTTATTGATTTCTAAATTG+TGG | + | chr2_1:48734444-48734463 | Msa0209710:intron | 25.0% |
| !! | TTTTCTTTTCTTGGAATGTA+TGG | + | chr2_1:48734545-48734564 | Msa0209710:intron | 25.0% |
| ! | TATAGATGAGATTTGAACTA+TGG | + | chr2_1:48734600-48734619 | Msa0209710:intron | 25.0% |
| ! | ACATAAGTCAGTATAATCAT+AGG | - | chr2_1:48734698-48734717 | None:intergenic | 25.0% |
| ! | GATTTGAATTATATCCATTG+AGG | + | chr2_1:48734765-48734784 | Msa0209710:intron | 25.0% |
| ! | CATTTCTCTTTCAATAAAGT+GGG | - | chr2_1:48734834-48734853 | None:intergenic | 25.0% |
| ! | TCATTTCTCTTTCAATAAAG+TGG | - | chr2_1:48734835-48734854 | None:intergenic | 25.0% |
| ! | AATTACACGCATAATCAAAA+TGG | - | chr2_1:48735173-48735192 | None:intergenic | 25.0% |
| !! | TTGATTATGCGTGTAATTTT+CGG | + | chr2_1:48735175-48735194 | Msa0209710:intron | 25.0% |
| !! | TTATTATTTGGGATCTCTTA+CGG | + | chr2_1:48735220-48735239 | Msa0209710:intron | 25.0% |
| ! | ATTCTTATTGTAAAAGGGAA+GGG | - | chr2_1:48735715-48735734 | None:intergenic | 25.0% |
| !! | ACAATAAGAATGTGTTTTGT+TGG | + | chr2_1:48735724-48735743 | Msa0209710:intron | 25.0% |
| !!! | CAATAAGAATGTGTTTTGTT+GGG | + | chr2_1:48735725-48735744 | Msa0209710:intron | 25.0% |
| ! | CCTAGTTAGCATAATTATTT+GGG | - | chr2_1:48736211-48736230 | None:intergenic | 25.0% |
| ! | CCAAATAATTATGCTAACTA+GGG | + | chr2_1:48736209-48736228 | Msa0209710:intron | 25.0% |
| ! | TGATAATATAGCAGTTAGTT+CGG | + | chr2_1:48736247-48736266 | Msa0209710:intron | 25.0% |
| !!! | TGAAATAGTTCTGCAATTTT+TGG | + | chr2_1:48736308-48736327 | Msa0209710:intron | 25.0% |
| ! | ACATAGTTATCTTTACTTCA+GGG | + | chr2_1:48736355-48736374 | Msa0209710:intron | 25.0% |
| ! | AGTTAAAGAGAAATAGTGAT+GGG | - | chr2_1:48736607-48736626 | None:intergenic | 25.0% |
| ! | TCATTTATATCCATCAACAT+TGG | - | chr2_1:48736669-48736688 | None:intergenic | 25.0% |
| ! | AGTATCGTTATTATGAGATT+CGG | - | chr2_1:48736767-48736786 | None:intergenic | 25.0% |
| !! | TTATTTCATATCACCTTTTG+AGG | - | chr2_1:48736834-48736853 | None:intergenic | 25.0% |
| !! | GTTTTACGTATCTCTTTTAA+TGG | - | chr2_1:48737195-48737214 | None:intergenic | 25.0% |
| ! | CAAAAAAAGAGAGTTAAATC+AGG | - | chr2_1:48737296-48737315 | None:intergenic | 25.0% |
| !!! | TGTATGTTTGATTGTTTTGT+AGG | + | chr2_1:48737552-48737571 | Msa0209710:intron | 25.0% |
| ! | TTTCCATATTTAGTAATGCT+TGG | + | chr2_1:48737701-48737720 | Msa0209710:intron | 25.0% |
| ! | AGCATTAACAGATAAAATTC+AGG | - | chr2_1:48737948-48737967 | None:intergenic | 25.0% |
| ! | ATCAACATAAGAAAAATGCT+AGG | - | chr2_1:48738149-48738168 | None:intergenic | 25.0% |
| ! | CATTGACATACATAACTAAA+AGG | - | chr2_1:48738322-48738341 | None:intergenic | 25.0% |
| !!! | GTTCTTTTTGTATTAGTCTA+AGG | + | chr2_1:48738351-48738370 | Msa0209710:intron | 25.0% |
| !!! | ATTTTGCTATACTTATGCTT+CGG | + | chr2_1:48738406-48738425 | Msa0209710:intron | 25.0% |
| !! | CTATTTTCATCAAAAGCAAA+AGG | - | chr2_1:48738598-48738617 | None:intergenic | 25.0% |
| !!! | TTTGCTTTTGATGAAAATAG+TGG | + | chr2_1:48738598-48738617 | Msa0209710:intron | 25.0% |
| ! | TGTTGTAAAAACCTATGTTT+AGG | - | chr2_1:48738735-48738754 | None:intergenic | 25.0% |
| !! | AACATAGGTTTTTACAACAA+CGG | + | chr2_1:48738736-48738755 | Msa0209710:intron | 25.0% |
| ! | ATAACTCATTAACCATTAAC+TGG | + | chr2_1:48739380-48739399 | Msa0209710:intron | 25.0% |
| ! | TAACTCATTAACCATTAACT+GGG | + | chr2_1:48739381-48739400 | Msa0209710:intron | 25.0% |
| ! | CAGTTTATAGAATGTAATTG+TGG | - | chr2_1:48739694-48739713 | None:intergenic | 25.0% |
| ! | ATTAAATCACCTATGTTTCA+TGG | - | chr2_1:48739751-48739770 | None:intergenic | 25.0% |
| ! | CATAGGTGATTTAATGTAAA+TGG | + | chr2_1:48739756-48739775 | Msa0209710:intron | 25.0% |
| ! | GTAACTTTCAAAGCTTATAA+TGG | + | chr2_1:48739881-48739900 | Msa0209710:CDS | 25.0% |
| ! | TAATATTAGTCGCATATTTG+TGG | + | chr2_1:48740160-48740179 | Msa0209710:three_prime_UTR | 25.0% |
| ! | AATATTAGTCGCATATTTGT+GGG | + | chr2_1:48740161-48740180 | Msa0209710:three_prime_UTR | 25.0% |
| ! | CATCTAACAATCATGATTTA+CGG | - | chr2_1:48740338-48740357 | None:intergenic | 25.0% |
| !!! | ATATGTTTTGGAGAACTAAA+CGG | - | chr2_1:48740423-48740442 | None:intergenic | 25.0% |
| TTTCTTGGAATGTATGGTAT+TGG | + | chr2_1:48734551-48734570 | Msa0209710:intron | 30.0% | |
| GCTTAACTTTATAACCTCAA+TGG | - | chr2_1:48734782-48734801 | None:intergenic | 30.0% | |
| TAAAATCATGGTTGTCAATG+TGG | + | chr2_1:48734973-48734992 | Msa0209710:intron | 30.0% | |
| TCAATAGGTGTATTCTTTAG+AGG | + | chr2_1:48735096-48735115 | Msa0209710:five_prime_UTR | 30.0% | |
| ! | TGATTATGCGTGTAATTTTC+GGG | + | chr2_1:48735176-48735195 | Msa0209710:intron | 30.0% |
| ! | GAGTTCTCGTGTTATTATTT+GGG | + | chr2_1:48735209-48735228 | Msa0209710:intron | 30.0% |
| ! | TGAAACTATCTCTTCCATTT+TGG | - | chr2_1:48735641-48735660 | None:intergenic | 30.0% |
| CATTCTTATTGTAAAAGGGA+AGG | - | chr2_1:48735716-48735735 | None:intergenic | 30.0% | |
| !!! | TGAACTTTTTGACTTGTGAT+AGG | + | chr2_1:48736165-48736184 | Msa0209710:intron | 30.0% |
| CCCAAATAATTATGCTAACT+AGG | + | chr2_1:48736208-48736227 | Msa0209710:intron | 30.0% | |
| CCCTAGTTAGCATAATTATT+TGG | - | chr2_1:48736212-48736231 | None:intergenic | 30.0% | |
| AGCAACTTAGTTGTAAAAAG+AGG | + | chr2_1:48736274-48736293 | Msa0209710:intron | 30.0% | |
| GCAACTTAGTTGTAAAAAGA+GGG | + | chr2_1:48736275-48736294 | Msa0209710:intron | 30.0% | |
| !!! | TAGTTCTGCAATTTTTGGTT+AGG | + | chr2_1:48736313-48736332 | Msa0209710:intron | 30.0% |
| GACATAGTTATCTTTACTTC+AGG | + | chr2_1:48736354-48736373 | Msa0209710:intron | 30.0% | |
| !! | TTTTTGGTCAAATAGCCTAA+TGG | + | chr2_1:48736473-48736492 | Msa0209710:intron | 30.0% |
| ! | GCTAGAAATTCACCTTTTTA+AGG | + | chr2_1:48736495-48736514 | Msa0209710:intron | 30.0% |
| !!! | ACCTTTTTAAGGTGAATAAG+TGG | + | chr2_1:48736506-48736525 | Msa0209710:intron | 30.0% |
| !!! | CCTTTTTAAGGTGAATAAGT+GGG | + | chr2_1:48736507-48736526 | Msa0209710:intron | 30.0% |
| !!! | CTTTTTAAGGTGAATAAGTG+GGG | + | chr2_1:48736508-48736527 | Msa0209710:intron | 30.0% |
| ACATTGCATAATATATGCAG+GGG | - | chr2_1:48736555-48736574 | None:intergenic | 30.0% | |
| GACATTGCATAATATATGCA+GGG | - | chr2_1:48736556-48736575 | None:intergenic | 30.0% | |
| GAGTTAAAGAGAAATAGTGA+TGG | - | chr2_1:48736608-48736627 | None:intergenic | 30.0% | |
| GAGATACGTAAAACTTCAAA+CGG | + | chr2_1:48737201-48737220 | Msa0209710:intron | 30.0% | |
| TAAAACTTCAAACGGATAAC+AGG | + | chr2_1:48737209-48737228 | Msa0209710:intron | 30.0% | |
| AATGCCAATTTGATGCTTTA+CGG | + | chr2_1:48737232-48737251 | Msa0209710:intron | 30.0% | |
| !!! | TAACTCTCTTTTTTTGCAGT+TGG | + | chr2_1:48737300-48737319 | Msa0209710:intron | 30.0% |
| TTTGTGTGATGCAGATTAAA+TGG | + | chr2_1:48737469-48737488 | Msa0209710:intron | 30.0% | |
| AAGTTGAAGACAATAATCAG+AGG | - | chr2_1:48737582-48737601 | None:intergenic | 30.0% | |
| ACTCCAAGCATTACTAAATA+TGG | - | chr2_1:48737707-48737726 | None:intergenic | 30.0% | |
| AACAAACACAGAAAATATGC+TGG | + | chr2_1:48738204-48738223 | Msa0209710:intron | 30.0% | |
| ACATAACTAAAAGGTTAGAC+AGG | - | chr2_1:48738313-48738332 | None:intergenic | 30.0% | |
| AAAATTGAACGTATGGGTAT+GGG | - | chr2_1:48738767-48738786 | None:intergenic | 30.0% | |
| AAAAATTGAACGTATGGGTA+TGG | - | chr2_1:48738768-48738787 | None:intergenic | 30.0% | |
| TTTCAATTCTGATATGTGTG+TGG | + | chr2_1:48738947-48738966 | Msa0209710:intron | 30.0% | |
| ATATGGACATACTTTGAACA+TGG | - | chr2_1:48739116-48739135 | None:intergenic | 30.0% | |
| TTTCCATGACACATCAAAAT+GGG | - | chr2_1:48739274-48739293 | None:intergenic | 30.0% | |
| ! | TTTTCCATGACACATCAAAA+TGG | - | chr2_1:48739275-48739294 | None:intergenic | 30.0% |
| !! | ATTTTGATGTGTCATGGAAA+AGG | + | chr2_1:48739274-48739293 | Msa0209710:CDS | 30.0% |
| AGGTGATTTAATGTAAATGG+TGG | + | chr2_1:48739759-48739778 | Msa0209710:intron | 30.0% | |
| ! | TATTATTTCAGGTGATGATG+TGG | + | chr2_1:48739799-48739818 | Msa0209710:intron | 30.0% |
| !! | GTTTGGTTCTTACACATTAT+AGG | + | chr2_1:48739982-48740001 | Msa0209710:intron | 30.0% |
| CGTAAATCATGATTGTTAGA+TGG | + | chr2_1:48740336-48740355 | Msa0209710:three_prime_UTR | 30.0% | |
| GTTTCGACTTTCTACCTTAA+TGG | - | chr2_1:48734354-48734373 | None:intergenic | 35.0% | |
| AGATGAGATTTGAACTATGG+AGG | + | chr2_1:48734603-48734622 | Msa0209710:intron | 35.0% | |
| !! | ATAATCATAGGTGTTGGTGT+CGG | - | chr2_1:48734686-48734705 | None:intergenic | 35.0% |
| GTCAGTATAATCATAGGTGT+TGG | - | chr2_1:48734692-48734711 | None:intergenic | 35.0% | |
| TCAAATCCTAACATGGACAT+TGG | - | chr2_1:48734752-48734771 | None:intergenic | 35.0% | |
| !!! | GTAATTTTCGGGTGTAACTT+CGG | + | chr2_1:48735187-48735206 | Msa0209710:intron | 35.0% |
| ! | GGAGTTCTCGTGTTATTATT+TGG | + | chr2_1:48735208-48735227 | Msa0209710:intron | 35.0% |
| !!! | GGATGACTGTTGTTTTTATC+AGG | + | chr2_1:48735244-48735263 | Msa0209710:intron | 35.0% |
| !!! | TGACTGTTGTTTTTATCAGG+TGG | + | chr2_1:48735247-48735266 | Msa0209710:intron | 35.0% |
| AACACCAAGCAACTATAGTT+TGG | + | chr2_1:48735329-48735348 | Msa0209710:CDS | 35.0% | |
| ATAGGTAATGTCATATCACC+TGG | - | chr2_1:48735380-48735399 | None:intergenic | 35.0% | |
| TTTCAAGACAGAAACCAAAC+AGG | + | chr2_1:48735656-48735675 | Msa0209710:intron | 35.0% | |
| ACACAAGATGTTCTATTGCA+TGG | - | chr2_1:48735777-48735796 | None:intergenic | 35.0% | |
| CTAAGACACGCTTGTAAAAT+GGG | - | chr2_1:48735845-48735864 | None:intergenic | 35.0% | |
| AAGAAAAAAGTTTGCACGAG+AGG | + | chr2_1:48735929-48735948 | Msa0209710:intron | 35.0% | |
| AAGAAAAATGACAAGTGACC+AGG | + | chr2_1:48735981-48736000 | Msa0209710:intron | 35.0% | |
| ! | ATTTCTCTCTGGTTTACAGT+AGG | + | chr2_1:48736054-48736073 | Msa0209710:intron | 35.0% |
| TGGTTTACAGTAGGTTAATC+AGG | + | chr2_1:48736063-48736082 | Msa0209710:intron | 35.0% | |
| !!! | ATTTTTGGTTAGGACCTTAG+AGG | + | chr2_1:48736323-48736342 | Msa0209710:intron | 35.0% |
| TATGTCTTCTCAAACCTCTA+AGG | - | chr2_1:48736340-48736359 | None:intergenic | 35.0% | |
| !! | AAGGTGAATTTCTAGCCATT+AGG | - | chr2_1:48736491-48736510 | None:intergenic | 35.0% |
| CCCACTTATTCACCTTAAAA+AGG | - | chr2_1:48736510-48736529 | None:intergenic | 35.0% | |
| GGACATTGCATAATATATGC+AGG | - | chr2_1:48736557-48736576 | None:intergenic | 35.0% | |
| !! | ATTGGCTCTACCTCAAATTT+AGG | - | chr2_1:48736651-48736670 | None:intergenic | 35.0% |
| GGATATAAATGAAGCTCACA+TGG | + | chr2_1:48736677-48736696 | Msa0209710:intron | 35.0% | |
| TATAAATGAAGCTCACATGG+TGG | + | chr2_1:48736680-48736699 | Msa0209710:intron | 35.0% | |
| ATAAATGAAGCTCACATGGT+GGG | + | chr2_1:48736681-48736700 | Msa0209710:intron | 35.0% | |
| TTAGGAAGCAGCTATATACT+AGG | - | chr2_1:48736728-48736747 | None:intergenic | 35.0% | |
| GGCTGTAGTTATTGTGTATT+AGG | - | chr2_1:48736746-48736765 | None:intergenic | 35.0% | |
| !! | CATATCACCTTTTGAGGAAA+AGG | - | chr2_1:48736828-48736847 | None:intergenic | 35.0% |
| ! | GAATTTTCAGATTTCCTCCA+TGG | + | chr2_1:48736907-48736926 | Msa0209710:intron | 35.0% |
| ! | TTGGGAATCAAACTAGTTCT+CGG | - | chr2_1:48736945-48736964 | None:intergenic | 35.0% |
| GATAGTGACTATTGCTTACA+AGG | + | chr2_1:48737027-48737046 | Msa0209710:intron | 35.0% | |
| TGCATTTGATTAGAAACAGC+AGG | - | chr2_1:48737167-48737186 | None:intergenic | 35.0% | |
| !!! | TTACGGTGGTTTTAATGTTG+TGG | + | chr2_1:48737249-48737268 | Msa0209710:intron | 35.0% |
| ATCTGCATCACACAAATCAA+CGG | - | chr2_1:48737465-48737484 | None:intergenic | 35.0% | |
| AAGCCACCAAATAAAGACAT+TGG | - | chr2_1:48737519-48737538 | None:intergenic | 35.0% | |
| TCAAACATACAAGCAGTAGA+TGG | - | chr2_1:48737543-48737562 | None:intergenic | 35.0% | |
| CAAAATGCATTCAATGAACG+AGG | + | chr2_1:48737729-48737748 | Msa0209710:intron | 35.0% | |
| !!! | ATGTCTTTTAGGGTTTGATG+TGG | + | chr2_1:48737817-48737836 | Msa0209710:intron | 35.0% |
| ATCCAAACCTTCTAGATCAT+CGG | - | chr2_1:48737864-48737883 | None:intergenic | 35.0% | |
| TCTGACGTAATTCGTATTTG+TGG | + | chr2_1:48737968-48737987 | Msa0209710:intron | 35.0% | |
| TCTAACACTCACTCTCTTAT+TGG | + | chr2_1:48738017-48738036 | Msa0209710:intron | 35.0% | |
| CTAACACTCACTCTCTTATT+GGG | + | chr2_1:48738018-48738037 | Msa0209710:intron | 35.0% | |
| TTATTGGGTGAAATCCATGT+GGG | + | chr2_1:48738033-48738052 | Msa0209710:intron | 35.0% | |
| ATCTAACACTCTCTCCAATT+GGG | - | chr2_1:48738114-48738133 | None:intergenic | 35.0% | |
| TATCTAACACTCTCTCCAAT+TGG | - | chr2_1:48738115-48738134 | None:intergenic | 35.0% | |
| AATGGTATGGGTACGAAATA+CGG | - | chr2_1:48738799-48738818 | None:intergenic | 35.0% | |
| TTTCGTACCCATACCATTAT+TGG | + | chr2_1:48738801-48738820 | Msa0209710:intron | 35.0% | |
| TTCGTACCCATACCATTATT+GGG | + | chr2_1:48738802-48738821 | Msa0209710:intron | 35.0% | |
| ATGATGCATAGGTACAAGTA+CGG | - | chr2_1:48738830-48738849 | None:intergenic | 35.0% | |
| TACTTGTACCTATGCATCAT+AGG | + | chr2_1:48738830-48738849 | Msa0209710:intron | 35.0% | |
| AGGATTTACCTATGATGCAT+AGG | - | chr2_1:48738841-48738860 | None:intergenic | 35.0% | |
| TCCTCAATTTCAGATGATGT+TGG | + | chr2_1:48738857-48738876 | Msa0209710:intron | 35.0% | |
| ! | TCCAACATCATCTGAAATTG+AGG | - | chr2_1:48738861-48738880 | None:intergenic | 35.0% |
| CAATTTCAGATGATGTTGGA+AGG | + | chr2_1:48738861-48738880 | Msa0209710:intron | 35.0% | |
| TGATGCGCTGAAGTAAAATA+TGG | - | chr2_1:48739133-48739152 | None:intergenic | 35.0% | |
| ACCTTGAGTAACAAGTTACA+AGG | + | chr2_1:48739214-48739233 | Msa0209710:CDS | 35.0% | |
| CCTTGAGTAACAAGTTACAA+GGG | + | chr2_1:48739215-48739234 | Msa0209710:CDS | 35.0% | |
| CTTGAGTAACAAGTTACAAG+GGG | + | chr2_1:48739216-48739235 | Msa0209710:CDS | 35.0% | |
| ATGACACATCAAAATGGGAA+AGG | - | chr2_1:48739269-48739288 | None:intergenic | 35.0% | |
| !! | TTTCCCATTTTGATGTGTCA+TGG | + | chr2_1:48739268-48739287 | Msa0209710:CDS | 35.0% |
| GGTAAGTGAGATATCAAGAT+TGG | + | chr2_1:48739357-48739376 | Msa0209710:intron | 35.0% | |
| TGTTCATCTCTACATGTTGT+TGG | - | chr2_1:48739455-48739474 | None:intergenic | 35.0% | |
| !! | GATTAATCACGTTTAGCTTG+TGG | + | chr2_1:48739487-48739506 | Msa0209710:intron | 35.0% |
| GGCTAATAAAGTTCAGTAGA+CGG | + | chr2_1:48739508-48739527 | Msa0209710:intron | 35.0% | |
| ! | TTTTTGCTGCCATGAAACAT+AGG | + | chr2_1:48739739-48739758 | Msa0209710:intron | 35.0% |
| GATTTCTCACCAAACTTGTA+GGG | - | chr2_1:48739827-48739846 | None:intergenic | 35.0% | |
| TGATTTCTCACCAAACTTGT+AGG | - | chr2_1:48739828-48739847 | None:intergenic | 35.0% | |
| GTTCTTACACATTATAGGCT+TGG | + | chr2_1:48739987-48740006 | Msa0209710:intron | 35.0% | |
| !! | TTTCTTCTGGAATTGTGTAG+TGG | - | chr2_1:48740013-48740032 | None:intergenic | 35.0% |
| CTACACAATTCCAGAAGAAA+CGG | + | chr2_1:48740013-48740032 | Msa0209710:CDS | 35.0% | |
| TGCTTGGCTAACATCAAAAT+TGG | + | chr2_1:48740046-48740065 | Msa0209710:CDS | 35.0% | |
| GCTTGGCTAACATCAAAATT+GGG | + | chr2_1:48740047-48740066 | Msa0209710:CDS | 35.0% | |
| CTTTCTTGCTAAAGCTAACT+AGG | - | chr2_1:48740090-48740109 | None:intergenic | 35.0% | |
| !! | CTAGTTAGCTTTAGCAAGAA+AGG | + | chr2_1:48740088-48740107 | Msa0209710:exon | 35.0% |
| CATGATTGTTAGATGGAGAT+TGG | + | chr2_1:48740343-48740362 | Msa0209710:three_prime_UTR | 35.0% | |
| ATTGTTAGATGGAGATTGGA+TGG | + | chr2_1:48740347-48740366 | Msa0209710:three_prime_UTR | 35.0% | |
| TTTGGAGAACTAAACGGTAT+CGG | - | chr2_1:48740417-48740436 | None:intergenic | 35.0% | |
| AAAGTTAAGAAGACAACGCG+CGG | + | chr2_1:48734303-48734322 | Msa0209710:five_prime_UTR | 40.0% | |
| !!! | ACTAACGCTTTTTCCAACTC+AGG | - | chr2_1:48734655-48734674 | None:intergenic | 40.0% |
| CAAACCATATGACATGTCAG+TGG | - | chr2_1:48734810-48734829 | None:intergenic | 40.0% | |
| ACTTTCTCTCTCTACTGCTT+TGG | + | chr2_1:48734922-48734941 | Msa0209710:intron | 40.0% | |
| !! | CAGCTTTAAGACTGCTCAAT+AGG | + | chr2_1:48735081-48735100 | Msa0209710:intron | 40.0% |
| ! | TTATTTGGGATCTCTTACGG+TGG | + | chr2_1:48735223-48735242 | Msa0209710:intron | 40.0% |
| TTGGAAGAACCTATGTAGTC+AGG | + | chr2_1:48735296-48735315 | Msa0209710:CDS | 40.0% | |
| !! | GTTGCTTGGTGTTTACCTTT+AGG | - | chr2_1:48735322-48735341 | None:intergenic | 40.0% |
| GCAACCAAACTATAGTTGCT+TGG | - | chr2_1:48735336-48735355 | None:intergenic | 40.0% | |
| GCAACTATAGTTTGGTTGCA+CGG | + | chr2_1:48735337-48735356 | Msa0209710:CDS | 40.0% | |
| TTCTCCACCTCATAACTTAC+TGG | + | chr2_1:48735534-48735553 | Msa0209710:intron | 40.0% | |
| TTCACCAGTAAGTTATGAGG+TGG | - | chr2_1:48735541-48735560 | None:intergenic | 40.0% | |
| CCTTTCACCAGTAAGTTATG+AGG | - | chr2_1:48735544-48735563 | None:intergenic | 40.0% | |
| CCTCATAACTTACTGGTGAA+AGG | + | chr2_1:48735541-48735560 | Msa0209710:intron | 40.0% | |
| !! | TTTGATTTGTGGGGCCAAAA+TGG | + | chr2_1:48735624-48735643 | Msa0209710:intron | 40.0% |
| GACAGATATGAAAGCCTGTT+TGG | - | chr2_1:48735673-48735692 | None:intergenic | 40.0% | |
| CCTAAGACACGCTTGTAAAA+TGG | - | chr2_1:48735846-48735865 | None:intergenic | 40.0% | |
| ! | CCATTTTACAAGCGTGTCTT+AGG | + | chr2_1:48735843-48735862 | Msa0209710:intron | 40.0% |
| TTACAAGCGTGTCTTAGGAT+AGG | + | chr2_1:48735848-48735867 | Msa0209710:intron | 40.0% | |
| TACAAGCGTGTCTTAGGATA+GGG | + | chr2_1:48735849-48735868 | Msa0209710:intron | 40.0% | |
| TGTCTTAGGATAGGGAAAAG+AGG | + | chr2_1:48735857-48735876 | Msa0209710:intron | 40.0% | |
| GTCTTAGGATAGGGAAAAGA+GGG | + | chr2_1:48735858-48735877 | Msa0209710:intron | 40.0% | |
| AGAGGGAAAGAGAAGGATAA+TGG | + | chr2_1:48735875-48735894 | Msa0209710:intron | 40.0% | |
| GAGGGAAAGAGAAGGATAAT+GGG | + | chr2_1:48735876-48735895 | Msa0209710:intron | 40.0% | |
| AAAGTTTGCACGAGAGGATT+TGG | + | chr2_1:48735935-48735954 | Msa0209710:intron | 40.0% | |
| !! | GAGAGGATTTGGTTTGAAGA+GGG | + | chr2_1:48735946-48735965 | Msa0209710:intron | 40.0% |
| !! | ATTTGGTTTGAAGAGGGAGT+TGG | + | chr2_1:48735952-48735971 | Msa0209710:intron | 40.0% |
| ATGCATGATTCATGCTAGGA+GGG | + | chr2_1:48736021-48736040 | Msa0209710:intron | 40.0% | |
| GGTATGAGATGATTTCTCTC+TGG | + | chr2_1:48736043-48736062 | Msa0209710:intron | 40.0% | |
| AGTAGGTTAATCAGGTTTCG+AGG | + | chr2_1:48736071-48736090 | Msa0209710:intron | 40.0% | |
| AATATAACACCAGCAGCATG+AGG | - | chr2_1:48736112-48736131 | None:intergenic | 40.0% | |
| !! | TTGTGATAGGACACTGACTT+TGG | + | chr2_1:48736178-48736197 | Msa0209710:intron | 40.0% |
| !! | TGTGATAGGACACTGACTTT+GGG | + | chr2_1:48736179-48736198 | Msa0209710:intron | 40.0% |
| TAACAAAAGAAAGCCCCTGT+AGG | - | chr2_1:48736402-48736421 | None:intergenic | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+GGG | - | chr2_1:48736578-48736597 | None:intergenic | 40.0% |
| TACCAACTGAGTTAAGCTCA+CGG | + | chr2_1:48736578-48736597 | Msa0209710:intron | 40.0% | |
| GTCTTACCTGCCTAAATTTG+AGG | + | chr2_1:48736638-48736657 | Msa0209710:intron | 40.0% | |
| TAAATGAAGCTCACATGGTG+GGG | + | chr2_1:48736682-48736701 | Msa0209710:intron | 40.0% | |
| ACTAGGTTGCAGTTATGTAC+TGG | - | chr2_1:48736711-48736730 | None:intergenic | 40.0% | |
| ! | GAAAAGGTGATGCTTTTGTG+AGG | - | chr2_1:48736812-48736831 | None:intergenic | 40.0% |
| ! | AGCATCACCTTTTCCTCAAA+AGG | + | chr2_1:48736818-48736837 | Msa0209710:intron | 40.0% |
| CATGATAGTTGCAATGCAAC+CGG | + | chr2_1:48736861-48736880 | Msa0209710:intron | 40.0% | |
| TCCCTAGTGGCTTCAAAATT+CGG | + | chr2_1:48736885-48736904 | Msa0209710:intron | 40.0% | |
| !!! | TCCGAATTTTGAAGCCACTA+GGG | - | chr2_1:48736889-48736908 | None:intergenic | 40.0% |
| !!! | TTCCGAATTTTGAAGCCACT+AGG | - | chr2_1:48736890-48736909 | None:intergenic | 40.0% |
| ! | TTTTCAGATTTCCTCCATGG+TGG | + | chr2_1:48736910-48736929 | Msa0209710:intron | 40.0% |
| ! | CAAACTAGTTCTCGGAGTAA+TGG | - | chr2_1:48736937-48736956 | None:intergenic | 40.0% |
| ! | ACCACCGTAAAGCATCAAAT+TGG | - | chr2_1:48737239-48737258 | None:intergenic | 40.0% |
| CTCTTCCTCTTCCAAATGTA+AGG | + | chr2_1:48737339-48737358 | Msa0209710:intron | 40.0% | |
| CAAAGTCGTGTCCTTACATT+TGG | - | chr2_1:48737353-48737372 | None:intergenic | 40.0% | |
| AAGGACACGACTTTGATTGT+TGG | + | chr2_1:48737358-48737377 | Msa0209710:intron | 40.0% | |
| AATAAAGACATTGGCCGAGT+TGG | - | chr2_1:48737510-48737529 | None:intergenic | 40.0% | |
| ACTCGGCCAATGTCTTTATT+TGG | + | chr2_1:48737510-48737529 | Msa0209710:CDS | 40.0% | |
| ! | ACTGCGACTCTATGTCTTTT+AGG | + | chr2_1:48737806-48737825 | Msa0209710:intron | 40.0% |
| ! | CTGCGACTCTATGTCTTTTA+GGG | + | chr2_1:48737807-48737826 | Msa0209710:intron | 40.0% |
| TCCAAACCTTCTAGATCATC+GGG | - | chr2_1:48737863-48737882 | None:intergenic | 40.0% | |
| GGGTTCTGTAGACAACAAAT+TGG | - | chr2_1:48737906-48737925 | None:intergenic | 40.0% | |
| GTAAGAAACCTACTGTCTGT+GGG | - | chr2_1:48737926-48737945 | None:intergenic | 40.0% | |
| CTTATTGGGTGAAATCCATG+TGG | + | chr2_1:48738032-48738051 | Msa0209710:intron | 40.0% | |
| ! | TGGGTACCATACTTTGGAAA+TGG | + | chr2_1:48738052-48738071 | Msa0209710:intron | 40.0% |
| ! | GGGTACCATACTTTGGAAAT+GGG | + | chr2_1:48738053-48738072 | Msa0209710:intron | 40.0% |
| GAAATGGGTCCCAAATAAAG+TGG | + | chr2_1:48738068-48738087 | Msa0209710:intron | 40.0% | |
| ! | TGGGTCTCACCACTTTATTT+GGG | - | chr2_1:48738080-48738099 | None:intergenic | 40.0% |
| CTTATCTCGGGTATTTACCA+CGG | + | chr2_1:48738284-48738303 | Msa0209710:intron | 40.0% | |
| TGTGAATCCCTCTTAAGCAT+GGG | + | chr2_1:48738436-48738455 | Msa0209710:intron | 40.0% | |
| AAGCATGGGTACTCCTAAAA+TGG | + | chr2_1:48738450-48738469 | Msa0209710:intron | 40.0% | |
| ! | TACGGGTACTTCACCATTTT+AGG | - | chr2_1:48738466-48738485 | None:intergenic | 40.0% |
| !! | GATGAAAATAGTGGATTCGC+TGG | + | chr2_1:48738607-48738626 | Msa0209710:intron | 40.0% |
| GAAGCATGATGATAGATGTG+TGG | + | chr2_1:48738649-48738668 | Msa0209710:intron | 40.0% | |
| TAGATGTGTGGTTAAACACG+TGG | + | chr2_1:48738661-48738680 | Msa0209710:intron | 40.0% | |
| ACGGTACCCAATAATGGTAT+GGG | - | chr2_1:48738811-48738830 | None:intergenic | 40.0% | |
| TACGGTACCCAATAATGGTA+TGG | - | chr2_1:48738812-48738831 | None:intergenic | 40.0% | |
| ACAAGTACGGTACCCAATAA+TGG | - | chr2_1:48738817-48738836 | None:intergenic | 40.0% | |
| AAAGCAGGATGCAGAGTAAA+GGG | - | chr2_1:48739018-48739037 | None:intergenic | 40.0% | |
| TAAAGCAGGATGCAGAGTAA+AGG | - | chr2_1:48739019-48739038 | None:intergenic | 40.0% | |
| !! | CCCTTGTAACTTGTTACTCA+AGG | - | chr2_1:48739218-48739237 | None:intergenic | 40.0% |
| GCTTAATTGAGCCCAGTTAA+TGG | - | chr2_1:48739395-48739414 | None:intergenic | 40.0% | |
| ! | TCGAAGTGCTTGACTTCTAA+TGG | + | chr2_1:48739848-48739867 | Msa0209710:CDS | 40.0% |
| AACATCAAAATTGGGCCTTG+AGG | + | chr2_1:48740055-48740074 | Msa0209710:CDS | 40.0% | |
| ACATCAAAATTGGGCCTTGA+GGG | + | chr2_1:48740056-48740075 | Msa0209710:CDS | 40.0% | |
| ATATTTGTGGGCGAGTACAT+TGG | + | chr2_1:48740173-48740192 | Msa0209710:three_prime_UTR | 40.0% | |
| TATTTGTGGGCGAGTACATT+GGG | + | chr2_1:48740174-48740193 | Msa0209710:three_prime_UTR | 40.0% | |
| ! | TTTTGTGACAGCAGACAATC+TGG | - | chr2_1:48740299-48740318 | None:intergenic | 40.0% |
| CGACTTTCTACCTTAATGGC+CGG | - | chr2_1:48734350-48734369 | None:intergenic | 45.0% | |
| CAGTGTCCAATGTCCATGTT+AGG | + | chr2_1:48734743-48734762 | Msa0209710:intron | 45.0% | |
| CCATATGACATGTCAGTGGT+AGG | - | chr2_1:48734806-48734825 | None:intergenic | 45.0% | |
| CCTACCACTGACATGTCATA+TGG | + | chr2_1:48734803-48734822 | Msa0209710:intron | 45.0% | |
| AGCTTTGCTGCATCATCAGT+TGG | + | chr2_1:48735127-48735146 | Msa0209710:CDS | 45.0% | |
| GCTGCAACAGCATATGAGTT+TGG | + | chr2_1:48735277-48735296 | Msa0209710:CDS | 45.0% | |
| ACCTATGTAGTCAGGCCTAA+AGG | + | chr2_1:48735304-48735323 | Msa0209710:CDS | 45.0% | |
| ACCTTTAGGCCTGACTACAT+AGG | - | chr2_1:48735308-48735327 | None:intergenic | 45.0% | |
| AGGGAAAAGAGGGAAAGAGA+AGG | + | chr2_1:48735868-48735887 | Msa0209710:intron | 45.0% | |
| !! | CGAGAGGATTTGGTTTGAAG+AGG | + | chr2_1:48735945-48735964 | Msa0209710:intron | 45.0% |
| GAGGATGCATGATTCATGCT+AGG | + | chr2_1:48736017-48736036 | Msa0209710:intron | 45.0% | |
| GATGCATGATTCATGCTAGG+AGG | + | chr2_1:48736020-48736039 | Msa0209710:intron | 45.0% | |
| TGCATGATTCATGCTAGGAG+GGG | + | chr2_1:48736022-48736041 | Msa0209710:intron | 45.0% | |
| AGGTTAATCAGGTTTCGAGG+AGG | + | chr2_1:48736074-48736093 | Msa0209710:intron | 45.0% | |
| ! | GTTCATCGCAAGTTGACAAC+AGG | - | chr2_1:48736150-48736169 | None:intergenic | 45.0% |
| TACTTCAGGGAGCTTAGCTA+TGG | + | chr2_1:48736368-48736387 | Msa0209710:intron | 45.0% | |
| ACTTCAGGGAGCTTAGCTAT+GGG | + | chr2_1:48736369-48736388 | Msa0209710:intron | 45.0% | |
| CTATGGGATTACAGCCTACA+GGG | + | chr2_1:48736385-48736404 | Msa0209710:intron | 45.0% | |
| TATGGGATTACAGCCTACAG+GGG | + | chr2_1:48736386-48736405 | Msa0209710:intron | 45.0% | |
| TGCATAATATATGCAGGGGC+CGG | - | chr2_1:48736551-48736570 | None:intergenic | 45.0% | |
| GTGAGCTTAACTCAGTTGGT+AGG | - | chr2_1:48736579-48736598 | None:intergenic | 45.0% | |
| ACCAACTGAGTTAAGCTCAC+GGG | + | chr2_1:48736579-48736598 | Msa0209710:intron | 45.0% | |
| GCTCTACCTCAAATTTAGGC+AGG | - | chr2_1:48736647-48736666 | None:intergenic | 45.0% | |
| TGAGGTAGAGCCAATGTTGA+TGG | + | chr2_1:48736656-48736675 | Msa0209710:intron | 45.0% | |
| CGGTTGCATTGCAACTATCA+TGG | - | chr2_1:48736863-48736882 | None:intergenic | 45.0% | |
| !!! | TTTTGAAGCCACTAGGGAAC+CGG | - | chr2_1:48736883-48736902 | None:intergenic | 45.0% |
| !! | CACGACAGGATATCGACTTT+GGG | - | chr2_1:48736963-48736982 | None:intergenic | 45.0% |
| !! | TCACGACAGGATATCGACTT+TGG | - | chr2_1:48736964-48736983 | None:intergenic | 45.0% |
| TCCGCTAAACACTGCAATAG+CGG | + | chr2_1:48736985-48737004 | Msa0209710:intron | 45.0% | |
| ACCGCTATTGCAGTGTTTAG+CGG | - | chr2_1:48736989-48737008 | None:intergenic | 45.0% | |
| GCCAATTTGATGCTTTACGG+TGG | + | chr2_1:48737235-48737254 | Msa0209710:intron | 45.0% | |
| CGTGTCCTTACATTTGGAAG+AGG | - | chr2_1:48737347-48737366 | None:intergenic | 45.0% | |
| GACACGACTTTGATTGTTGG+AGG | + | chr2_1:48737361-48737380 | Msa0209710:intron | 45.0% | |
| TATGTCCAACTGCTCCAACT+CGG | + | chr2_1:48737493-48737512 | Msa0209710:CDS | 45.0% | |
| ! | CGGCCAATGTCTTTATTTGG+TGG | + | chr2_1:48737513-48737532 | Msa0209710:CDS | 45.0% |
| TCCCGATGATCTAGAAGGTT+TGG | + | chr2_1:48737859-48737878 | Msa0209710:CDS | 45.0% | |
| GGTAAGAAACCTACTGTCTG+TGG | - | chr2_1:48737927-48737946 | None:intergenic | 45.0% | |
| TCCATGTGGGTACCATACTT+TGG | + | chr2_1:48738046-48738065 | Msa0209710:intron | 45.0% | |
| TCCAAAGTATGGTACCCACA+TGG | - | chr2_1:48738050-48738069 | None:intergenic | 45.0% | |
| TGGGACCCATTTCCAAAGTA+TGG | - | chr2_1:48738061-48738080 | None:intergenic | 45.0% | |
| GTGGGTCTCACCACTTTATT+TGG | - | chr2_1:48738081-48738100 | None:intergenic | 45.0% | |
| CAATTGGGTGAAACTCGTGT+GGG | - | chr2_1:48738099-48738118 | None:intergenic | 45.0% | |
| AAAGGTTAGACAGGTATCCG+TGG | - | chr2_1:48738304-48738323 | None:intergenic | 45.0% | |
| GTGTGAATCCCTCTTAAGCA+TGG | + | chr2_1:48738435-48738454 | Msa0209710:intron | 45.0% | |
| !! | AGGAGTACCCATGCTTAAGA+GGG | - | chr2_1:48738446-48738465 | None:intergenic | 45.0% |
| !! | TAGGAGTACCCATGCTTAAG+AGG | - | chr2_1:48738447-48738466 | None:intergenic | 45.0% |
| ! | AAATGGTGAAGTACCCGTAC+CGG | + | chr2_1:48738467-48738486 | Msa0209710:intron | 45.0% |
| ATGTGTGTGGCAGTTAAGCT+TGG | + | chr2_1:48738960-48738979 | Msa0209710:intron | 45.0% | |
| !! | CAGTTAAGCTTGGTGTTGGA+GGG | + | chr2_1:48738970-48738989 | Msa0209710:intron | 45.0% |
| TCTGCATCCTGCTTTACTTC+CGG | + | chr2_1:48739023-48739042 | Msa0209710:CDS | 45.0% | |
| ATACTTCCCGGAAGTAAAGC+AGG | - | chr2_1:48739033-48739052 | None:intergenic | 45.0% | |
| TGCTTTACTTCCGGGAAGTA+TGG | + | chr2_1:48739032-48739051 | Msa0209710:CDS | 45.0% | |
| ! | GCTTTACTTCCGGGAAGTAT+GGG | + | chr2_1:48739033-48739052 | Msa0209710:CDS | 45.0% |
| ATTGCCATTCCCATACTTCC+CGG | - | chr2_1:48739045-48739064 | None:intergenic | 45.0% | |
| ACCAACAGCTGCACTTATGT+TGG | - | chr2_1:48739078-48739097 | None:intergenic | 45.0% | |
| !! | AGTGCAGCTGTTGGTTTAAG+TGG | + | chr2_1:48739083-48739102 | Msa0209710:CDS | 45.0% |
| GATGTGGTTCCCTACAAGTT+TGG | + | chr2_1:48739815-48739834 | Msa0209710:CDS | 45.0% | |
| CAAACATCGTCCGTTTCTTC+TGG | - | chr2_1:48740026-48740045 | None:intergenic | 45.0% | |
| AAACGGACGATGTTTGTGCT+TGG | + | chr2_1:48740030-48740049 | Msa0209710:CDS | 45.0% | |
| ATTTGTGGGCGAGTACATTG+GGG | + | chr2_1:48740175-48740194 | Msa0209710:three_prime_UTR | 45.0% | |
| !! | GTACATTGGGGGTATTGGTT+AGG | + | chr2_1:48740187-48740206 | Msa0209710:three_prime_UTR | 45.0% |
| TATGGAGGACAGACTCTCCT+CGG | + | chr2_1:48734618-48734637 | Msa0209710:intron | 50.0% | |
| GGATTAGGTGTGTCCTGAGT+TGG | + | chr2_1:48734639-48734658 | Msa0209710:intron | 50.0% | |
| !! | ATAGGTGTTGGTGTCGGAGT+TGG | - | chr2_1:48734680-48734699 | None:intergenic | 50.0% |
| ATAGTTTGGTTGCACGGCCT+CGG | + | chr2_1:48735343-48735362 | Msa0209710:CDS | 50.0% | |
| ! | AAGTGACCAGGTGAGAGTGT+GGG | + | chr2_1:48735993-48736012 | Msa0209710:intron | 50.0% |
| ACACCAGCAGCATGAGGAAA+AGG | - | chr2_1:48736106-48736125 | None:intergenic | 50.0% | |
| GCTATGGGATTACAGCCTAC+AGG | + | chr2_1:48736384-48736403 | Msa0209710:intron | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr2_1:48736515-48736534 | Msa0209710:intron | 50.0% |
| CATAATATATGCAGGGGCCG+GGG | - | chr2_1:48736549-48736568 | None:intergenic | 50.0% | |
| GCATAATATATGCAGGGGCC+GGG | - | chr2_1:48736550-48736569 | None:intergenic | 50.0% | |
| CCAACTGAGTTAAGCTCACG+GGG | + | chr2_1:48736580-48736599 | Msa0209710:intron | 50.0% | |
| !! | ACAGCAGGAGAAGCATCAAG+TGG | - | chr2_1:48737152-48737171 | None:intergenic | 50.0% |
| GAAGCTCCCGATGATCTAGA+AGG | + | chr2_1:48737854-48737873 | Msa0209710:CDS | 50.0% | |
| CTACAGAACCCACAGACAGT+AGG | + | chr2_1:48737915-48737934 | Msa0209710:intron | 50.0% | |
| CCAATTGGGTGAAACTCGTG+TGG | - | chr2_1:48738100-48738119 | None:intergenic | 50.0% | |
| CCACACGAGTTTCACCCAAT+TGG | + | chr2_1:48738097-48738116 | Msa0209710:intron | 50.0% | |
| ! | AATGGTGAAGTACCCGTACC+GGG | + | chr2_1:48738468-48738487 | Msa0209710:intron | 50.0% |
| TACTATGCCAGTACCCGGTA+CGG | - | chr2_1:48738484-48738503 | None:intergenic | 50.0% | |
| GCAAGTACTATGCCAGTACC+CGG | - | chr2_1:48738489-48738508 | None:intergenic | 50.0% | |
| !! | GTGGCAGTTAAGCTTGGTGT+TGG | + | chr2_1:48738966-48738985 | Msa0209710:intron | 50.0% |
| !! | GCAGTTAAGCTTGGTGTTGG+AGG | + | chr2_1:48738969-48738988 | Msa0209710:intron | 50.0% |
| ! | TGGTGTTGGAGGGTTTAGCA+TGG | + | chr2_1:48738980-48738999 | Msa0209710:CDS | 50.0% |
| ! | GGTGTTGGAGGGTTTAGCAT+GGG | + | chr2_1:48738981-48739000 | Msa0209710:CDS | 50.0% |
| CTGCATCCTGCTTTACTTCC+GGG | + | chr2_1:48739024-48739043 | Msa0209710:CDS | 50.0% | |
| ! | ACTTCCGGGAAGTATGGGAA+TGG | + | chr2_1:48739038-48739057 | Msa0209710:CDS | 50.0% |
| ACAGCTGCACTTATGTTGGC+TGG | - | chr2_1:48739074-48739093 | None:intergenic | 50.0% | |
| GCCAACATAAGTGCAGCTGT+TGG | + | chr2_1:48739074-48739093 | Msa0209710:CDS | 50.0% | |
| !! | CAGCTGTTGGTTTAAGTGGC+TGG | + | chr2_1:48739087-48739106 | Msa0209710:CDS | 50.0% |
| TTTGTGGGCGAGTACATTGG+GGG | + | chr2_1:48740176-48740195 | Msa0209710:three_prime_UTR | 50.0% | |
| CTTCGGAGTCTCAACACTGC+CGG | + | chr2_1:48734328-48734347 | Msa0209710:five_prime_UTR | 55.0% | |
| CTCAACACTGCCGGCCATTA+AGG | + | chr2_1:48734337-48734356 | Msa0209710:five_prime_UTR | 55.0% | |
| GGACAGACTCTCCTCGGATT+AGG | + | chr2_1:48734624-48734643 | Msa0209710:intron | 55.0% | |
| CTCAGGACACACCTAATCCG+AGG | - | chr2_1:48734638-48734657 | None:intergenic | 55.0% | |
| TTGCACGGCCTCGGTGATAA+TGG | + | chr2_1:48735352-48735371 | Msa0209710:CDS | 55.0% | |
| ACCTGGAGCCATTATCACCG+AGG | - | chr2_1:48735363-48735382 | None:intergenic | 55.0% | |
| CAAGTGACCAGGTGAGAGTG+TGG | + | chr2_1:48735992-48736011 | Msa0209710:intron | 55.0% | |
| ATCAGGTTTCGAGGAGGAGC+TGG | + | chr2_1:48736080-48736099 | Msa0209710:intron | 55.0% | |
| ! | TGGCCTTTTCCTCATGCTGC+TGG | + | chr2_1:48736100-48736119 | Msa0209710:intron | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr2_1:48736516-48736535 | Msa0209710:intron | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr2_1:48736517-48736536 | Msa0209710:intron | 55.0% |
| CCCCGTGAGCTTAACTCAGT+TGG | - | chr2_1:48736583-48736602 | None:intergenic | 55.0% | |
| ! | CAATGCAACCGGTTCCCTAG+TGG | + | chr2_1:48736872-48736891 | Msa0209710:intron | 55.0% |
| !! | GGAGTAATGGACCACCATGG+AGG | - | chr2_1:48736924-48736943 | None:intergenic | 55.0% |
| !! | CTCGGAGTAATGGACCACCA+TGG | - | chr2_1:48736927-48736946 | None:intergenic | 55.0% |
| GTGTTTAGCGGAGTCACGAC+AGG | - | chr2_1:48736977-48736996 | None:intergenic | 55.0% | |
| ! | ATTGGCCGAGTTGGAGCAGT+TGG | - | chr2_1:48737501-48737520 | None:intergenic | 55.0% |
| ACTATGCCAGTACCCGGTAC+GGG | - | chr2_1:48738483-48738502 | None:intergenic | 55.0% | |
| CGTGTACGGATCGGTACGTA+TGG | - | chr2_1:48738513-48738532 | None:intergenic | 55.0% | |
| TTTCACCGCCTGCACGTGTA+CGG | - | chr2_1:48738527-48738546 | None:intergenic | 55.0% | |
| AAGGGGTAGATGAAGCCACG+AGG | + | chr2_1:48739233-48739252 | Msa0209710:CDS | 55.0% | |
| ACTAGGCAGCATTGCCCTCA+AGG | - | chr2_1:48740073-48740092 | None:intergenic | 55.0% | |
| ! | GGCGAGTACATTGGGGGTAT+TGG | + | chr2_1:48740182-48740201 | Msa0209710:three_prime_UTR | 55.0% |
| GAAGACAACGCGCGGAGCTT+CGG | + | chr2_1:48734311-48734330 | Msa0209710:five_prime_UTR | 60.0% | |
| !! | GCCTCGGTGATAATGGCTCC+AGG | + | chr2_1:48735359-48735378 | Msa0209710:CDS | 60.0% |
| ! | ACCAGGTGAGAGTGTGGGAG+AGG | + | chr2_1:48735998-48736017 | Msa0209710:intron | 60.0% |
| TCCTCTCCCACACTCTCACC+TGG | - | chr2_1:48736002-48736021 | None:intergenic | 60.0% | |
| ! | GAAGTACCCGTACCGGGTAC+TGG | + | chr2_1:48738474-48738493 | Msa0209710:intron | 60.0% |
| ! | GTACCGATCCGTACACGTGC+AGG | + | chr2_1:48738516-48738535 | Msa0209710:intron | 60.0% |
| AAAGGACTGAGCACGCCTCG+TGG | - | chr2_1:48739251-48739270 | None:intergenic | 60.0% | |
| CCGCCTGCACGTGTACGGAT+CGG | - | chr2_1:48738522-48738541 | None:intergenic | 65.0% | |
| CCGATCCGTACACGTGCAGG+CGG | + | chr2_1:48738519-48738538 | Msa0209710:intron | 65.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr2_1:48736529-48736548 | Msa0209710:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | - | chr2_1:48736537-48736556 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 48734282 | 48740447 | 48734282 | ID=Msa0209710;Name=Msa0209710 |
| chr2_1 | mRNA | 48734282 | 48740447 | 48734282 | ID=Msa0209710-mRNA-1;Parent=Msa0209710;Name=Msa0209710-mRNA-1;_AED=0.07;_eAED=0.07;_QI=117|1|1|1|0.88|0.8|10|356|255 |
| chr2_1 | exon | 48734282 | 48734358 | 48734282 | ID=Msa0209710-mRNA-1:exon:13519;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48735084 | 48735148 | 48735084 | ID=Msa0209710-mRNA-1:exon:13520;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48735266 | 48735380 | 48735266 | ID=Msa0209710-mRNA-1:exon:13521;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48737319 | 48737355 | 48737319 | ID=Msa0209710-mRNA-1:exon:13522;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48737483 | 48737552 | 48737483 | ID=Msa0209710-mRNA-1:exon:13523;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48737828 | 48737932 | 48737828 | ID=Msa0209710-mRNA-1:exon:13524;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48738973 | 48739123 | 48738973 | ID=Msa0209710-mRNA-1:exon:13525;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48739213 | 48739295 | 48739213 | ID=Msa0209710-mRNA-1:exon:13526;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48739810 | 48739903 | 48739810 | ID=Msa0209710-mRNA-1:exon:13527;Parent=Msa0209710-mRNA-1 |
| chr2_1 | exon | 48740004 | 48740447 | 48740004 | ID=Msa0209710-mRNA-1:exon:13528;Parent=Msa0209710-mRNA-1 |
| chr2_1 | five_prime_UTR | 48734282 | 48734358 | 48734282 | ID=Msa0209710-mRNA-1:five_prime_utr;Parent=Msa0209710-mRNA-1 |
| chr2_1 | five_prime_UTR | 48735084 | 48735123 | 48735084 | ID=Msa0209710-mRNA-1:five_prime_utr;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48735124 | 48735148 | 48735124 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48735266 | 48735380 | 48735266 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48737319 | 48737355 | 48737319 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48737483 | 48737552 | 48737483 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48737828 | 48737932 | 48737828 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48738973 | 48739123 | 48738973 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48739213 | 48739295 | 48739213 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48739810 | 48739903 | 48739810 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | CDS | 48740004 | 48740091 | 48740004 | ID=Msa0209710-mRNA-1:cds;Parent=Msa0209710-mRNA-1 |
| chr2_1 | three_prime_UTR | 48740092 | 48740447 | 48740092 | ID=Msa0209710-mRNA-1:three_prime_utr;Parent=Msa0209710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
