AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0209330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209330 MtrunA17_Chr2g0306801 97.326 374 10 0 1 374 1 374 0.0 770
Msa0209330 MtrunA17_Chr1g0165131 39.412 340 170 8 26 352 79 395 2.02e-65 213
Msa0209330 MtrunA17_Chr4g0067351 37.864 309 171 7 26 333 142 430 7.48e-54 186
Msa0209330 MtrunA17_Chr2g0295951 37.540 309 172 8 26 333 144 432 4.67e-53 184
Msa0209330 MtrunA17_Chr6g0488051 33.046 348 200 10 26 372 65 380 2.48e-51 176
Msa0209330 MtrunA17_Chr1g0211591 39.683 252 133 7 46 290 1 240 1.21e-49 167
Msa0209330 MtrunA17_Chr3g0082021 33.432 338 167 13 25 331 255 565 2.15e-40 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209330 AT1G04870.2 72.626 358 98 0 17 374 26 383 0.0 577
Msa0209330 AT1G04870.1 68.214 280 89 0 95 374 1 280 1.93e-152 431
Msa0209330 AT3G20020.1 35.655 359 177 7 26 352 83 419 3.56e-62 206
Msa0209330 AT3G20020.3 35.655 359 177 7 26 352 83 419 4.01e-62 206
Msa0209330 AT4G29510.1 33.824 340 195 8 26 364 72 382 1.49e-53 182
Msa0209330 AT3G06930.2 36.202 337 189 12 2 333 121 436 2.11e-53 185
Msa0209330 AT3G06930.1 36.202 337 189 12 2 333 121 436 2.25e-53 185
Msa0209330 AT2G19670.1 33.434 332 183 9 26 352 48 346 2.41e-52 178
Msa0209330 AT3G20020.2 33.148 359 164 8 26 352 83 397 2.80e-52 179
Msa0209330 AT5G49020.2 37.217 309 173 10 26 333 149 437 8.29e-52 181
Msa0209330 AT5G49020.1 37.217 309 173 10 26 333 151 439 8.86e-52 181
Msa0209330 AT3G12270.1 34.234 333 166 11 25 335 244 545 1.24e-41 154

Find 134 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATCCTACAATAAGGTTTC+AGG 0.177563 2_1:-46959217 None:intergenic
ATCGAACTGTACGGTTATTA+AGG 0.177944 2_1:+46958884 Msa0209330:three_prime_UTR
GAAATTTGTGTAGGTTGTTT+TGG 0.274614 2_1:+46952968 Msa0209330:intron
TGTACAACAGTTATTTCTTT+TGG 0.275267 2_1:+46959190 Msa0209330:three_prime_UTR
GGTGGTTTGATGTACATTTC+CGG 0.276872 2_1:+46957835 Msa0209330:CDS
ATTAGCGTAGTCGACTTCTT+TGG 0.288507 2_1:-46952763 None:intergenic
TTCTACTATCCCAGTCCTAA+TGG 0.297541 2_1:-46954946 None:intergenic
TTAGCGTAGTCGACTTCTTT+GGG 0.302924 2_1:-46952762 None:intergenic
TCTACTCTAATCCTACAATA+AGG 0.346144 2_1:-46959224 None:intergenic
GATGAAACAAAAGCCTTCTA+TGG 0.355790 2_1:+46955020 Msa0209330:CDS
ACTTGGTTCTTCCGATCATT+TGG 0.357148 2_1:+46958961 Msa0209330:three_prime_UTR
AACACAAAACTGTGTGGATA+TGG 0.358771 2_1:+46957810 Msa0209330:CDS
CAACCCTGAAACCTTATTGT+AGG 0.361894 2_1:+46959213 Msa0209330:three_prime_UTR
GAAGGGAAACCATCGTTTAA+TGG 0.372426 2_1:+46958418 Msa0209330:CDS
GTGGTTTGATGTACATTTCC+GGG 0.373727 2_1:+46957836 Msa0209330:CDS
TTGGTTTGGCGGTAGGGTTT+AGG 0.379205 2_1:-46952635 None:intergenic
GACCGCTGGCTCAAACCAAC+AGG 0.380824 2_1:+46953916 Msa0209330:CDS
TCGAACTGTACGGTTATTAA+GGG 0.392893 2_1:+46958885 Msa0209330:three_prime_UTR
GCACCGTTAAAGAGGATAGT+AGG 0.395495 2_1:-46959261 None:intergenic
TTGGATGTTGGTGCTGGAAG+TGG 0.397747 2_1:+46952987 Msa0209330:CDS
AACGCCGCCGGTGGTGGCCG+AGG 0.402656 2_1:+46952729 Msa0209330:CDS
CTGTGAGATTCAAAAGCATT+CGG 0.404202 2_1:+46958454 Msa0209330:CDS
GCTCATATCAACACCATAGA+AGG 0.404592 2_1:-46955033 None:intergenic
TCAGGATTGGTTTGGCGGTA+GGG 0.411845 2_1:-46952641 None:intergenic
ACAAGCTTTGCTTGAAAGTC+GGG 0.412753 2_1:-46959066 None:intergenic
TCCGAAAACGCCGCCGGTGG+TGG 0.416415 2_1:+46952723 Msa0209330:CDS
ATTTATTGATTATTTAATTG+TGG 0.425146 2_1:+46959138 Msa0209330:three_prime_UTR
TACCCTACTATCCTCTTTAA+CGG 0.429025 2_1:+46959258 Msa0209330:three_prime_UTR
CAGGTTGTTGAGGTTATTGA+GGG 0.437694 2_1:+46953119 Msa0209330:CDS
CGTTTAATGGAGGTTGAGCT+TGG 0.443414 2_1:+46958431 Msa0209330:CDS
CTTCATCCACATCAAGTCAT+AGG 0.443890 2_1:+46957690 Msa0209330:CDS
AATCCTACAATAAGGTTTCA+GGG 0.448390 2_1:-46959216 None:intergenic
TCTACTATCCCAGTCCTAAT+GGG 0.449075 2_1:-46954945 None:intergenic
GGCGGTGCCTCGGCCACCAC+CGG 0.450973 2_1:-46952736 None:intergenic
TGGATGTTGGTGCTGGAAGT+GGG 0.452123 2_1:+46952988 Msa0209330:CDS
GAAGTGGGATTCTTGCTATA+TGG 0.455599 2_1:+46953003 Msa0209330:CDS
GCATGTGGATGGCACCCATT+AGG 0.455721 2_1:+46954931 Msa0209330:CDS
CATACAAACAAACCTTTCTC+AGG 0.456902 2_1:-46953164 None:intergenic
GCAGGTTGTTGAGGTTATTG+AGG 0.459237 2_1:+46953118 Msa0209330:CDS
GATGTTACATTGCCTGAGAA+AGG 0.461263 2_1:+46953152 Msa0209330:CDS
AACTCAATCTCATGTTCAGC+TGG 0.461498 2_1:-46957952 None:intergenic
TTCCTCTGCTCCTCAGCAAA+AGG 0.461816 2_1:-46955068 None:intergenic
GTCAGGATTGGTTTGGCGGT+AGG 0.462470 2_1:-46952642 None:intergenic
ACTATCCTCTTTAACGGTGC+AGG 0.462692 2_1:+46959264 Msa0209330:three_prime_UTR
TCATATGTGCTCGTGACCGC+TGG 0.468854 2_1:+46953902 Msa0209330:CDS
TAAAACCTGCACCGTTAAAG+AGG 0.472216 2_1:-46959269 None:intergenic
TGTGAGATTCAAAAGCATTC+GGG 0.473426 2_1:+46958455 Msa0209330:CDS
CTTTGGGGACGGCGGTGCCT+CGG 0.475277 2_1:-46952746 None:intergenic
TTTATTGATTATTTAATTGT+GGG 0.477910 2_1:+46959139 Msa0209330:three_prime_UTR
GGGCGATTACCAGTCAGCTA+TGG 0.480043 2_1:+46954977 Msa0209330:CDS
AGCTCAAGCAGGTGCAAAGA+AGG 0.480270 2_1:+46953028 Msa0209330:CDS
CTGTACACACTGGGGTCAGC+AGG 0.481201 2_1:+46957999 Msa0209330:CDS
TTAGGTCAGGATTGGTTTGG+CGG 0.494154 2_1:-46952646 None:intergenic
TACAAGCTTTGCTTGAAAGT+CGG 0.495762 2_1:-46959067 None:intergenic
CAGCATTATTCAGTGATGGT+TGG 0.501524 2_1:+46959019 Msa0209330:three_prime_UTR
TGGGATAGTAGAACAAAAGT+TGG 0.503612 2_1:+46954956 Msa0209330:CDS
ACCAGTCAGCTATGGGCGAT+TGG 0.509747 2_1:+46954985 Msa0209330:CDS
CATCAAGTCATAGGAACTGC+TGG 0.510644 2_1:+46957699 Msa0209330:CDS
CCCCTGTTGGTTTGAGCCAG+CGG 0.514302 2_1:-46953918 None:intergenic
GGTTATTGAGGGTTCTGTTG+AGG 0.518633 2_1:+46953130 Msa0209330:CDS
GTGTGACATGTGACTCATAA+GGG 0.519310 2_1:+46958988 Msa0209330:three_prime_UTR
GCAGAGGAAATACTATCTAC+AGG 0.521867 2_1:+46955082 Msa0209330:CDS
TGGATGGCACCCATTAGGAC+TGG 0.527259 2_1:+46954936 Msa0209330:CDS
TGTTATCATCTCTGAATGGA+TGG 0.530239 2_1:+46953843 Msa0209330:CDS
GGCGATTACCAGTCAGCTAT+GGG 0.531624 2_1:+46954978 Msa0209330:CDS
TACTAACCTTGTCTTTAAAG+TGG 0.532555 2_1:-46952884 None:intergenic
TGTTTACAGAAGAAAGCAGT+TGG 0.534384 2_1:+46958925 Msa0209330:three_prime_UTR
GCCAATCGCCCATAGCTGAC+TGG 0.534934 2_1:-46954986 None:intergenic
GCTCTCAGATCGTGTTCGTA+TGG 0.535538 2_1:+46952827 Msa0209330:CDS
AATACTTACATCACCCCTGT+TGG 0.538492 2_1:-46953931 None:intergenic
TGTTCAGCATTATTCAGTGA+TGG 0.540471 2_1:+46959015 Msa0209330:three_prime_UTR
TTTCTAATGAGTCGCTCGAA+GGG 0.540973 2_1:+46958401 Msa0209330:CDS
TAATCTTGAGCAGGTTGTTG+AGG 0.544159 2_1:+46953109 Msa0209330:CDS
TTCAATCTTATCGAACTGTA+CGG 0.544210 2_1:+46958875 Msa0209330:three_prime_UTR
AGGAACTGCTGGTCTAGTAA+AGG 0.544394 2_1:+46957710 Msa0209330:CDS
GAAATCGAATAATCTTGAGC+AGG 0.548053 2_1:+46953100 Msa0209330:CDS
GCTATATGGTCAGCTCAAGC+AGG 0.548853 2_1:+46953017 Msa0209330:CDS
GGGATAGTAGAACAAAAGTT+GGG 0.555999 2_1:+46954957 Msa0209330:CDS
TGTGTGACATGTGACTCATA+AGG 0.556044 2_1:+46958987 Msa0209330:three_prime_UTR
CCATCACTCACATGTGTAGG+AGG 0.557201 2_1:-46958359 None:intergenic
AATAACTGTTGTACAATGGA+AGG 0.559071 2_1:-46959182 None:intergenic
GTTAAAGAGGATAGTAGGGT+AGG 0.565436 2_1:-46959256 None:intergenic
AGTTTAGATTCCTTTGTTCG+CGG 0.567958 2_1:+46958522 Msa0209330:three_prime_UTR
TAGTCATGCTCGCATGTGGA+TGG 0.569852 2_1:+46954920 Msa0209330:CDS
CACCGTTAAAGAGGATAGTA+GGG 0.571415 2_1:-46959260 None:intergenic
TTGGTGATAGAGAAAGGAGT+AGG 0.571481 2_1:-46952796 None:intergenic
GTTTAAAGAGCAATAAATAA+CGG 0.572222 2_1:+46952605 None:intergenic
AAGAAATAACTGTTGTACAA+TGG 0.572673 2_1:-46959186 None:intergenic
ATCCACATGCGAGCATGACT+AGG 0.578485 2_1:-46954918 None:intergenic
GGATGGCACCCATTAGGACT+GGG 0.582000 2_1:+46954937 Msa0209330:CDS
TAGCGTAGTCGACTTCTTTG+GGG 0.583467 2_1:-46952761 None:intergenic
TGGTTGGATAAACCTCGTAT+TGG 0.584299 2_1:+46959035 Msa0209330:three_prime_UTR
GGTGCCTCGGCCACCACCGG+CGG 0.585507 2_1:-46952733 None:intergenic
ATCCTAGTCATGCTCGCATG+TGG 0.586013 2_1:+46954916 Msa0209330:CDS
TGCTTACCAGGGACGAAGTG+AGG 0.588452 2_1:+46957927 Msa0209330:intron
GTCACACAAAACCAAATGAT+CGG 0.588979 2_1:-46958972 None:intergenic
TGTAGATTACTGTACACACT+GGG 0.591513 2_1:+46957990 Msa0209330:CDS
TTAAAGAGGATAGTAGGGTA+GGG 0.591600 2_1:-46959255 None:intergenic
GCTTGAAGCTCCGCGAACAA+AGG 0.592466 2_1:-46958532 None:intergenic
AATTTCTGTAGACGTCGTTG+TGG 0.596251 2_1:+46957661 Msa0209330:intron
ACTTCTTCCGAAAACGCCGC+CGG 0.596388 2_1:+46952717 Msa0209330:CDS
TCTTCCGAAAACGCCGCCGG+TGG 0.601011 2_1:+46952720 Msa0209330:CDS
CAAACACCACTTTAAAGACA+AGG 0.601109 2_1:+46952878 Msa0209330:CDS
TTGATGTTATCATCTCTGAA+TGG 0.604535 2_1:+46953839 Msa0209330:CDS
TGCCACAGTGGCAGACATAG+AGG 0.605748 2_1:+46957749 Msa0209330:CDS
GTGTAGATTACTGTACACAC+TGG 0.606301 2_1:+46957989 Msa0209330:CDS
TCACCATCACTCACATGTGT+AGG 0.616419 2_1:-46958362 None:intergenic
GTAGTCGACTTCTTTGGGGA+CGG 0.618495 2_1:-46952757 None:intergenic
GGTTCTTACTCACTCAGCGG+TGG 0.619536 2_1:-46952688 None:intergenic
ACCGCTGGCTCAAACCAACA+GGG 0.622592 2_1:+46953917 Msa0209330:CDS
TGTTGAAGCTACTAAGATGT+CGG 0.627273 2_1:+46953058 Msa0209330:CDS
TTCCTCTATGTCTGCCACTG+TGG 0.627982 2_1:-46957751 None:intergenic
CATGTGTAGGAGGATTTAAG+AGG 0.628125 2_1:-46958349 None:intergenic
ACAAAACTGTGTGGATATGG+AGG 0.629006 2_1:+46957813 Msa0209330:CDS
GGGAAACCATCGTTTAATGG+AGG 0.633476 2_1:+46958421 Msa0209330:CDS
GTCGACTTCTTTGGGGACGG+CGG 0.634616 2_1:-46952754 None:intergenic
GCTGAGTGAGTAAGAACCAT+GGG 0.636916 2_1:+46952693 Msa0209330:exon
TGTGTACAGTAATCTACACT+AGG 0.645957 2_1:-46957985 None:intergenic
GCAGTTCCTATGACTTGATG+TGG 0.646015 2_1:-46957696 None:intergenic
CGCTGAGTGAGTAAGAACCA+TGG 0.649117 2_1:+46952692 Msa0209330:exon
GTAATCTACACTAGGAGCGG+TGG 0.661333 2_1:-46957977 None:intergenic
TGGTGTTGATATGAGCACTT+TGG 0.661843 2_1:+46955040 Msa0209330:CDS
GTTATCATCTCTGAATGGAT+GGG 0.664829 2_1:+46953844 Msa0209330:CDS
GAGCTTCAAGCAGTATCCCA+CGG 0.678692 2_1:+46958544 Msa0209330:three_prime_UTR
GCTCAACCTCCATTAAACGA+TGG 0.680084 2_1:-46958427 None:intergenic
CCTCCTACACATGTGAGTGA+TGG 0.685198 2_1:+46958359 Msa0209330:CDS
CCGCTGGCTCAAACCAACAG+GGG 0.695198 2_1:+46953918 Msa0209330:CDS
CATGGTTCTTACTCACTCAG+CGG 0.701342 2_1:-46952691 None:intergenic
ACAGTAATCTACACTAGGAG+CGG 0.702438 2_1:-46957980 None:intergenic
ACAGAGAACACAAAACTGTG+TGG 0.712011 2_1:+46957804 Msa0209330:CDS
AACTGTGTGGATATGGAGGG+TGG 0.718749 2_1:+46957817 Msa0209330:CDS
CAAAACTGTGTGGATATGGA+GGG 0.725863 2_1:+46957814 Msa0209330:CDS
TGACTGTTTGACTGCCACAG+TGG 0.774647 2_1:+46957737 Msa0209330:CDS
GTAGATTACTGTACACACTG+GGG 0.847696 2_1:+46957991 Msa0209330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATGAATATTTCAAAA+AGG + chr2_1:46953316-46953335 Msa0209330:intron 10.0%
!!! TAAGAAAATATTATTTTTTC+GGG + chr2_1:46953489-46953508 Msa0209330:intron 10.0%
!!! AGTTTTATCATTAAATAAAA+AGG - chr2_1:46955740-46955759 None:intergenic 10.0%
!!! ATTTATTGATTATTTAATTG+TGG + chr2_1:46959138-46959157 Msa0209330:three_prime_UTR 10.0%
!!! TTTATTGATTATTTAATTGT+GGG + chr2_1:46959139-46959158 Msa0209330:three_prime_UTR 10.0%
!! TTATTAAGTGGTTAATTATA+GGG + chr2_1:46953402-46953421 Msa0209330:intron 15.0%
!! AACATTTAACAATTCATATA+AGG - chr2_1:46953756-46953775 None:intergenic 15.0%
!! TTATATGAATTGTTAAATGT+TGG + chr2_1:46953755-46953774 Msa0209330:intron 15.0%
!! TATACTATATATGAAAAATG+TGG + chr2_1:46954093-46954112 Msa0209330:intron 15.0%
!!! AGAAAATAATTATTAGCTTA+TGG - chr2_1:46954446-46954465 None:intergenic 15.0%
!! TTACACATAATAAAAACTAA+AGG - chr2_1:46955967-46955986 None:intergenic 15.0%
!! AATATAATAACAACATAGAT+TGG + chr2_1:46957215-46957234 Msa0209330:intron 15.0%
!!! ATATAGTACTTATTTTTGAA+AGG - chr2_1:46958494-46958513 None:intergenic 15.0%
!! TATTGATAAGAAATTTGTGT+AGG + chr2_1:46952959-46952978 Msa0209330:intron 20.0%
!!! TAAGGTTTTGAATTAAATCT+CGG + chr2_1:46953213-46953232 Msa0209330:intron 20.0%
!! GTTATTAAGTGGTTAATTAT+AGG + chr2_1:46953401-46953420 Msa0209330:intron 20.0%
!! TTAACCACAAATTATCAATT+TGG - chr2_1:46953429-46953448 None:intergenic 20.0%
!!! TATTTTCTTATAATAGTGAC+CGG - chr2_1:46953479-46953498 None:intergenic 20.0%
!! TATTGAATAATTGATGTATC+TGG - chr2_1:46953548-46953567 None:intergenic 20.0%
!! ATTATTCAATAACCTGAAAA+AGG + chr2_1:46953557-46953576 Msa0209330:intron 20.0%
!!! ATTTTTACATTGACTTAACA+TGG + chr2_1:46954691-46954710 Msa0209330:intron 20.0%
!!! GTTACATAGAATTTTTGTTA+TGG + chr2_1:46955149-46955168 Msa0209330:intron 20.0%
!!! TCAGTTTTACTATTCTAAAA+AGG - chr2_1:46955793-46955812 None:intergenic 20.0%
!!! ATAGGAAATGTTTTTGTTTT+AGG - chr2_1:46956232-46956251 None:intergenic 20.0%
!! AAACAAAAACATTTCCTATT+AGG + chr2_1:46956233-46956252 Msa0209330:intron 20.0%
!!! TTATATGATCTTCAACATTT+TGG - chr2_1:46956362-46956381 None:intergenic 20.0%
!! GTTGGAAATATATAGAAAAA+TGG + chr2_1:46957108-46957127 Msa0209330:intron 20.0%
!!! AAAGAACAATTTTTTAGAGA+AGG + chr2_1:46957152-46957171 Msa0209330:intron 20.0%
!! AGCAATTTGAATATTAATGA+AGG + chr2_1:46958089-46958108 Msa0209330:intron 20.0%
!!! TAGTGTAATGTTTTAATCAT+TGG + chr2_1:46958317-46958336 Msa0209330:intron 20.0%
!!! AAGACATTTTTTTAATACTG+AGG + chr2_1:46958688-46958707 Msa0209330:intron 20.0%
!!! AGACATTTTTTTAATACTGA+GGG + chr2_1:46958689-46958708 Msa0209330:intron 20.0%
!! AATATTACAATAGATAACTG+AGG + chr2_1:46958720-46958739 Msa0209330:intron 20.0%
!!! ATTGATTTTCTTTTTTGAAC+AGG + chr2_1:46958834-46958853 Msa0209330:intron 20.0%
!!! TTTTATTTTGAGAAGGAAAT+AGG + chr2_1:46959287-46959306 Msa0209330:three_prime_UTR 20.0%
!!! TTTATTTTGAGAAGGAAATA+GGG + chr2_1:46959288-46959307 Msa0209330:three_prime_UTR 20.0%
!!! TACTTCTAGTTTAAGTTGTA+AGG + chr2_1:46953195-46953214 Msa0209330:intron 25.0%
! CATTGAATAACTTATGTATC+TGG + chr2_1:46953514-46953533 Msa0209330:intron 25.0%
!! TAAGCAAATATTCCTTTTTC+AGG - chr2_1:46953572-46953591 None:intergenic 25.0%
! AAGGAATATTTGCTTATACT+AGG + chr2_1:46953576-46953595 Msa0209330:intron 25.0%
! AGGAATATTTGCTTATACTA+GGG + chr2_1:46953577-46953596 Msa0209330:intron 25.0%
! ACTCTATTATATAGTCAAGA+TGG - chr2_1:46953604-46953623 None:intergenic 25.0%
! ATTACCTATTTGAGAGTTTA+GGG + chr2_1:46953653-46953672 Msa0209330:intron 25.0%
! ATATAAACACCAACACTTTA+AGG - chr2_1:46953810-46953829 None:intergenic 25.0%
!!! AAACCTCTTCTTTTGTTTAT+GGG - chr2_1:46953965-46953984 None:intergenic 25.0%
!!! AAAACCTCTTCTTTTGTTTA+TGG - chr2_1:46953966-46953985 None:intergenic 25.0%
!!! TCTTTAGTTTTCAATAGAAC+AGG + chr2_1:46954205-46954224 Msa0209330:intron 25.0%
!!! CTTTAGTTTTCAATAGAACA+GGG + chr2_1:46954206-46954225 Msa0209330:intron 25.0%
! TAATCAGTATTGTTAAGTAG+TGG + chr2_1:46954230-46954249 Msa0209330:intron 25.0%
! TGTTGTTAATTGCAGAAATA+CGG - chr2_1:46954369-46954388 None:intergenic 25.0%
!!! GATTCAGATTTGTTAACATT+AGG - chr2_1:46954596-46954615 None:intergenic 25.0%
! ATTATCATGTAAAACTAGAG+AGG - chr2_1:46954639-46954658 None:intergenic 25.0%
! AAGTCAATGTAAAAATAGCA+TGG - chr2_1:46954687-46954706 None:intergenic 25.0%
!!! AATGATTTGGTAAACTATGA+AGG + chr2_1:46954774-46954793 Msa0209330:intron 25.0%
! TTTGTTAATGAGCAAATCTT+TGG + chr2_1:46954841-46954860 Msa0209330:intron 25.0%
!! ACCAGAAAATAGATAGTTTT+AGG + chr2_1:46955709-46955728 Msa0209330:intron 25.0%
!!! CCAGAAAATAGATAGTTTTA+GGG + chr2_1:46955710-46955729 Msa0209330:intron 25.0%
! AAATCCACTTACATATTGAA+AGG - chr2_1:46955855-46955874 None:intergenic 25.0%
!! GACTAGTTGAAATAAAATTG+AGG - chr2_1:46955885-46955904 None:intergenic 25.0%
! AAAAACTAAAGGAGATATGT+CGG - chr2_1:46955956-46955975 None:intergenic 25.0%
!!! AGTGGAAAAAAGAGTTTTAA+AGG - chr2_1:46955992-46956011 None:intergenic 25.0%
! TATATATATCGCCAATGAAT+TGG - chr2_1:46956198-46956217 None:intergenic 25.0%
! TAAAAAAATTCCCCTCATTT+GGG - chr2_1:46957309-46957328 None:intergenic 25.0%
! ATAAAAAAATTCCCCTCATT+TGG - chr2_1:46957310-46957329 None:intergenic 25.0%
!! GTTTTATGACTTTTATCTAC+AGG + chr2_1:46957469-46957488 Msa0209330:intron 25.0%
! TTCATTAGTGATACTTCAAT+GGG + chr2_1:46957498-46957517 Msa0209330:intron 25.0%
! TAATTTATGGAACTCATTGA+AGG - chr2_1:46958126-46958145 None:intergenic 25.0%
! AGAATAGAACAGCTAATTTA+TGG - chr2_1:46958139-46958158 None:intergenic 25.0%
! TCATACTTTCTGTGATAATT+TGG + chr2_1:46958213-46958232 Msa0209330:intron 25.0%
! ACATTGTCAGAATTGAAAAA+GGG - chr2_1:46958239-46958258 None:intergenic 25.0%
! TACATTGTCAGAATTGAAAA+AGG - chr2_1:46958240-46958259 None:intergenic 25.0%
! ATACAATTGAACTAGAATGA+AGG - chr2_1:46958289-46958308 None:intergenic 25.0%
!!! TAATGTTTTAATCATTGGAC+AGG + chr2_1:46958322-46958341 Msa0209330:intron 25.0%
! TTAAAGAACATTCAAATGGA+AGG - chr2_1:46958640-46958659 None:intergenic 25.0%
!!! ATTGTTAGGTTTTATAGTTG+AGG - chr2_1:46958747-46958766 None:intergenic 25.0%
!!! ATTTTCTTTTTTGAACAGGA+AGG + chr2_1:46958838-46958857 Msa0209330:intron 25.0%
! AAGAAATAACTGTTGTACAA+TGG - chr2_1:46959189-46959208 None:intergenic 25.0%
!!! TGTACAACAGTTATTTCTTT+TGG + chr2_1:46959190-46959209 Msa0209330:three_prime_UTR 25.0%
!!! TTATGTTTTTAGGTCAGGAT+TGG - chr2_1:46952657-46952676 None:intergenic 30.0%
!!! CAAGTTTATGTTTTTAGGTC+AGG - chr2_1:46952662-46952681 None:intergenic 30.0%
CTGACCTAAAAACATAAACT+TGG + chr2_1:46952660-46952679 Msa0209330:five_prime_UTR 30.0%
! GCAACCAAGTTTATGTTTTT+AGG - chr2_1:46952667-46952686 None:intergenic 30.0%
!! TTCTTTTTGGTGATAGAGAA+AGG - chr2_1:46952805-46952824 None:intergenic 30.0%
! TACTAACCTTGTCTTTAAAG+TGG - chr2_1:46952887-46952906 None:intergenic 30.0%
TTAGTATCCTTAACTGAACT+GGG + chr2_1:46952901-46952920 Msa0209330:intron 30.0%
! GAAATTTGTGTAGGTTGTTT+TGG + chr2_1:46952968-46952987 Msa0209330:intron 30.0%
ATGGTATTTGACGAAATCAA+TGG - chr2_1:46953268-46953287 None:intergenic 30.0%
AACTTAATTGATACTTCCTC+CGG + chr2_1:46953457-46953476 Msa0209330:intron 30.0%
GATTACCTATTTGAGAGTTT+AGG + chr2_1:46953652-46953671 Msa0209330:intron 30.0%
TAAACCCTAAACTCTCAAAT+AGG - chr2_1:46953660-46953679 None:intergenic 30.0%
! TATTTGAGAGTTTAGGGTTT+AGG + chr2_1:46953659-46953678 Msa0209330:intron 30.0%
TTGATGTTATCATCTCTGAA+TGG + chr2_1:46953839-46953858 Msa0209330:CDS 30.0%
ACTGTAACACTGTTGTATTA+CGG + chr2_1:46954314-46954333 Msa0209330:intron 30.0%
ACTGACATGTATCAATGATT+TGG + chr2_1:46954761-46954780 Msa0209330:intron 30.0%
TCTGCTTCATGAAAATGAAA+TGG + chr2_1:46954799-46954818 Msa0209330:intron 30.0%
AACCAAAATGAATTCCATGT+GGG - chr2_1:46955259-46955278 None:intergenic 30.0%
AAACCAAAATGAATTCCATG+TGG - chr2_1:46955260-46955279 None:intergenic 30.0%
!!! ATTTTGGTTTGTTTGTCGTA+CGG + chr2_1:46955270-46955289 Msa0209330:intron 30.0%
ATGTTGATGTTCTTGTTCTT+GGG - chr2_1:46955332-46955351 None:intergenic 30.0%
! AATTAGGTTTTTCATGCAAG+TGG - chr2_1:46955371-46955390 None:intergenic 30.0%
! GAATGAAGTACTTCTGAATT+AGG - chr2_1:46955387-46955406 None:intergenic 30.0%
ACAATGAAAAGGCTATAAGA+CGG - chr2_1:46955436-46955455 None:intergenic 30.0%
GTTATAGCACTAATGCTTAA+GGG + chr2_1:46955584-46955603 Msa0209330:intron 30.0%
TCTGACCAAAAATACAATAG+CGG - chr2_1:46955674-46955693 None:intergenic 30.0%
! CCCTAAAACTATCTATTTTC+TGG - chr2_1:46955713-46955732 None:intergenic 30.0%
CAAAAACATTTCCTATTAGG+TGG + chr2_1:46956236-46956255 Msa0209330:intron 30.0%
TTCAATAACAGCAAAAGTCT+AGG + chr2_1:46956444-46956463 Msa0209330:intron 30.0%
!!! AACTGCTTTTTTTCGGTTTT+TGG - chr2_1:46956688-46956707 None:intergenic 30.0%
!!! TGTTCTCAACTGCTTTTTTT+CGG - chr2_1:46956695-46956714 None:intergenic 30.0%
GAACTCAAAAATTGTATTGG+GGG - chr2_1:46957285-46957304 None:intergenic 30.0%
GGAACTCAAAAATTGTATTG+GGG - chr2_1:46957286-46957305 None:intergenic 30.0%
GGGAACTCAAAAATTGTATT+GGG - chr2_1:46957287-46957306 None:intergenic 30.0%
AAAAAAATTCCCCTCATTTG+GGG - chr2_1:46957308-46957327 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG - chr2_1:46957368-46957387 None:intergenic 30.0%
AACTACAAATCACACCATTA+AGG - chr2_1:46957452-46957471 None:intergenic 30.0%
! CATTGAAGTATCACTAATGA+AGG - chr2_1:46957499-46957518 None:intergenic 30.0%
CTTCATTAGTGATACTTCAA+TGG + chr2_1:46957497-46957516 Msa0209330:intron 30.0%
TGAAATCATCAAGAGAAAGT+TGG - chr2_1:46957587-46957606 None:intergenic 30.0%
AATATTAATGAAGGAGCTGA+TGG + chr2_1:46958098-46958117 Msa0209330:intron 30.0%
CCTGTTAAAGAACATTCAAA+TGG - chr2_1:46958644-46958663 None:intergenic 30.0%
CCATTTGAATGTTCTTTAAC+AGG + chr2_1:46958641-46958660 Msa0209330:intron 30.0%
!! TGTAGAAGTGCTTAATTGTT+AGG - chr2_1:46958761-46958780 None:intergenic 30.0%
TTCAATCTTATCGAACTGTA+CGG + chr2_1:46958875-46958894 Msa0209330:three_prime_UTR 30.0%
!!! TGGGTTGTCTGATTTTTTTT+TGG + chr2_1:46959158-46959177 Msa0209330:three_prime_UTR 30.0%
AATAACTGTTGTACAATGGA+AGG - chr2_1:46959185-46959204 None:intergenic 30.0%
AATCCTACAATAAGGTTTCA+GGG - chr2_1:46959219-46959238 None:intergenic 30.0%
TAATCCTACAATAAGGTTTC+AGG - chr2_1:46959220-46959239 None:intergenic 30.0%
TCTACTCTAATCCTACAATA+AGG - chr2_1:46959227-46959246 None:intergenic 30.0%
!!! TTTTTAGGTCAGGATTGGTT+TGG - chr2_1:46952652-46952671 None:intergenic 35.0%
!!! GATCTGAGAGCATTTCTTTT+TGG - chr2_1:46952818-46952837 None:intergenic 35.0%
! CAAACACCACTTTAAAGACA+AGG + chr2_1:46952878-46952897 Msa0209330:CDS 35.0%
GTTAGTATCCTTAACTGAAC+TGG + chr2_1:46952900-46952919 Msa0209330:intron 35.0%
TGTTGAAGCTACTAAGATGT+CGG + chr2_1:46953058-46953077 Msa0209330:CDS 35.0%
GAAATCGAATAATCTTGAGC+AGG + chr2_1:46953100-46953119 Msa0209330:CDS 35.0%
CATACAAACAAACCTTTCTC+AGG - chr2_1:46953167-46953186 None:intergenic 35.0%
TTTCGTCAAATACCATGACT+AGG + chr2_1:46953272-46953291 Msa0209330:intron 35.0%
!! ATTTGATAGTGTCCTAGTCA+TGG - chr2_1:46953287-46953306 None:intergenic 35.0%
! GGGACTAGATTGTTATTAAG+TGG + chr2_1:46953390-46953409 Msa0209330:intron 35.0%
! GGGTCCAAATTGATAATTTG+TGG + chr2_1:46953422-46953441 Msa0209330:intron 35.0%
TTTCTTATAATAGTGACCGG+AGG - chr2_1:46953476-46953495 None:intergenic 35.0%
!! TTTAGGGTTTAGGACTAGTT+TGG + chr2_1:46953669-46953688 Msa0209330:intron 35.0%
TGTTATCATCTCTGAATGGA+TGG + chr2_1:46953843-46953862 Msa0209330:CDS 35.0%
GTTATCATCTCTGAATGGAT+GGG + chr2_1:46953844-46953863 Msa0209330:CDS 35.0%
CTTCCCATAAACAAAAGAAG+AGG + chr2_1:46953959-46953978 Msa0209330:intron 35.0%
GTAATACAACAGTGTTACAG+TGG - chr2_1:46954315-46954334 None:intergenic 35.0%
ATACGGATAGCAGAAAAAAG+CGG - chr2_1:46954352-46954371 None:intergenic 35.0%
TTCTGCAATTAACAACACTG+AGG + chr2_1:46954372-46954391 Msa0209330:intron 35.0%
CTGAGAAAACAAGAAACAAG+TGG + chr2_1:46954511-46954530 Msa0209330:intron 35.0%
!!! AGTGGCTCTATTTTAGTGAA+GGG - chr2_1:46954563-46954582 None:intergenic 35.0%
!! GGTTTTGTGTTATGAAGGAA+TGG - chr2_1:46954618-46954637 None:intergenic 35.0%
!! AGAGAGGTTTTGTGTTATGA+AGG - chr2_1:46954623-46954642 None:intergenic 35.0%
! AGCATGGTAATGTGCAAATT+GGG - chr2_1:46954671-46954690 None:intergenic 35.0%
! TAGCATGGTAATGTGCAAAT+TGG - chr2_1:46954672-46954691 None:intergenic 35.0%
ATACATGTCAGTATCTCTGT+TGG - chr2_1:46954753-46954772 None:intergenic 35.0%
GTTAATGAGCAAATCTTTGG+TGG + chr2_1:46954844-46954863 Msa0209330:intron 35.0%
TGGGATAGTAGAACAAAAGT+TGG + chr2_1:46954956-46954975 Msa0209330:CDS 35.0%
GGGATAGTAGAACAAAAGTT+GGG + chr2_1:46954957-46954976 Msa0209330:CDS 35.0%
GATGAAACAAAAGCCTTCTA+TGG + chr2_1:46955020-46955039 Msa0209330:CDS 35.0%
ACCAAAATGAATTCCATGTG+GGG - chr2_1:46955258-46955277 None:intergenic 35.0%
! CACTTTTATACACTACAGCA+TGG - chr2_1:46955297-46955316 None:intergenic 35.0%
CATGTTGATGTTCTTGTTCT+TGG - chr2_1:46955333-46955352 None:intergenic 35.0%
ACAAGAACATCAACATGTGT+TGG + chr2_1:46955336-46955355 Msa0209330:intron 35.0%
TCTGAACTTGGTTTATGAGT+GGG - chr2_1:46955411-46955430 None:intergenic 35.0%
TTCTGAACTTGGTTTATGAG+TGG - chr2_1:46955412-46955431 None:intergenic 35.0%
! TATAAGACGGATTCTGAACT+TGG - chr2_1:46955423-46955442 None:intergenic 35.0%
TTCACTCTTGCACAATGAAA+AGG - chr2_1:46955447-46955466 None:intergenic 35.0%
TCATGATTGCATGGAAGAAA+GGG - chr2_1:46955487-46955506 None:intergenic 35.0%
TTCATGATTGCATGGAAGAA+AGG - chr2_1:46955488-46955507 None:intergenic 35.0%
CAATAATGCAACTGTGTAAG+TGG + chr2_1:46955524-46955543 Msa0209330:intron 35.0%
CGTTATAGCACTAATGCTTA+AGG + chr2_1:46955583-46955602 Msa0209330:intron 35.0%
GTGGAACAAGGATAGAAATT+AGG - chr2_1:46955634-46955653 None:intergenic 35.0%
!!! GCTATTGTATTTTTGGTCAG+AGG + chr2_1:46955673-46955692 Msa0209330:intron 35.0%
GCAACCTTTCAATATGTAAG+TGG + chr2_1:46955848-46955867 Msa0209330:intron 35.0%
TGTCTATTTCGCCAATGAAT+TGG - chr2_1:46956162-46956181 None:intergenic 35.0%
CGAAATAGACAACGTTCTAT+AGG + chr2_1:46956171-46956190 Msa0209330:intron 35.0%
GTTCTATAGGTCCAATTCAT+TGG + chr2_1:46956184-46956203 Msa0209330:intron 35.0%
AACCTCAAAAATGCTTTAGC+AGG + chr2_1:46956280-46956299 Msa0209330:intron 35.0%
AACCAAAAATCTGAGCAACA+GGG + chr2_1:46956615-46956634 Msa0209330:intron 35.0%
TTGAGTAGAAGAAAAAGCTG+TGG - chr2_1:46956658-46956677 None:intergenic 35.0%
CTGTTTCCATATCAAGATAG+AGG + chr2_1:46956893-46956912 Msa0209330:intron 35.0%
TTGCAACCTCTATCTTGATA+TGG - chr2_1:46956902-46956921 None:intergenic 35.0%
TATCAAGATAGAGGTTGCAA+TGG + chr2_1:46956902-46956921 Msa0209330:intron 35.0%
AAGCAATTCTGCTGTGTTAT+TGG + chr2_1:46957018-46957037 Msa0209330:intron 35.0%
!! ATCTCACTTTAGGCTTTGTT+TGG + chr2_1:46957049-46957068 Msa0209330:intron 35.0%
!! TCTCACTTTAGGCTTTGTTT+GGG + chr2_1:46957050-46957069 Msa0209330:intron 35.0%
TCAAAAATTGTATTGGGGGA+GGG - chr2_1:46957281-46957300 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG - chr2_1:46957288-46957307 None:intergenic 35.0%
AAAAAATTCCCCTCATTTGG+GGG - chr2_1:46957307-46957326 None:intergenic 35.0%
AAGAAATAGAAGACATTGGG+AGG - chr2_1:46957365-46957384 None:intergenic 35.0%
GTGGAAGAAATAGAAGACAT+TGG - chr2_1:46957369-46957388 None:intergenic 35.0%
!! ACACCATTAAGGCTTTGTTT+GGG - chr2_1:46957441-46957460 None:intergenic 35.0%
AACACAAAACTGTGTGGATA+TGG + chr2_1:46957810-46957829 Msa0209330:CDS 35.0%
TTTCCTGTTTATGCTTACCA+GGG + chr2_1:46957916-46957935 Msa0209330:intron 35.0%
TGTGTACAGTAATCTACACT+AGG - chr2_1:46957988-46958007 None:intergenic 35.0%
TGTAGATTACTGTACACACT+GGG + chr2_1:46957990-46958009 Msa0209330:CDS 35.0%
! CTCTCATCTATAAAGGTACA+AGG - chr2_1:46958177-46958196 None:intergenic 35.0%
TACCTTTATAGATGAGAGAC+AGG + chr2_1:46958179-46958198 Msa0209330:intron 35.0%
ACCTTTATAGATGAGAGACA+GGG + chr2_1:46958180-46958199 Msa0209330:intron 35.0%
!! CTGTGAGATTCAAAAGCATT+CGG + chr2_1:46958454-46958473 Msa0209330:CDS 35.0%
!! TGTGAGATTCAAAAGCATTC+GGG + chr2_1:46958455-46958474 Msa0209330:CDS 35.0%
AGTTTAGATTCCTTTGTTCG+CGG + chr2_1:46958522-46958541 Msa0209330:three_prime_UTR 35.0%
GAACATTCAAATGGAAGGAT+AGG - chr2_1:46958635-46958654 None:intergenic 35.0%
ATCGAACTGTACGGTTATTA+AGG + chr2_1:46958884-46958903 Msa0209330:three_prime_UTR 35.0%
TCGAACTGTACGGTTATTAA+GGG + chr2_1:46958885-46958904 Msa0209330:three_prime_UTR 35.0%
TGTTTACAGAAGAAAGCAGT+TGG + chr2_1:46958925-46958944 Msa0209330:three_prime_UTR 35.0%
!!! TTGGCGTTGCTTTTAATACT+TGG + chr2_1:46958944-46958963 Msa0209330:three_prime_UTR 35.0%
GTCACACAAAACCAAATGAT+CGG - chr2_1:46958975-46958994 None:intergenic 35.0%
TGTTCAGCATTATTCAGTGA+TGG + chr2_1:46959015-46959034 Msa0209330:three_prime_UTR 35.0%
TACAAGCTTTGCTTGAAAGT+CGG - chr2_1:46959070-46959089 None:intergenic 35.0%
TTAAAGAGGATAGTAGGGTA+GGG - chr2_1:46959258-46959277 None:intergenic 35.0%
TACCCTACTATCCTCTTTAA+CGG + chr2_1:46959258-46959277 Msa0209330:three_prime_UTR 35.0%
!!! GTGCAGGTTTTATTTTGAGA+AGG + chr2_1:46959280-46959299 Msa0209330:three_prime_UTR 35.0%
! TTAGCGTAGTCGACTTCTTT+GGG - chr2_1:46952765-46952784 None:intergenic 40.0%
! ATTAGCGTAGTCGACTTCTT+TGG - chr2_1:46952766-46952785 None:intergenic 40.0%
! TTGGTGATAGAGAAAGGAGT+AGG - chr2_1:46952799-46952818 None:intergenic 40.0%
ATCCTTAACTGAACTGGGTT+TGG + chr2_1:46952906-46952925 Msa0209330:intron 40.0%
TCCTTAACTGAACTGGGTTT+GGG + chr2_1:46952907-46952926 Msa0209330:intron 40.0%
!!! GTGTAGGTTGTTTTGGATGT+TGG + chr2_1:46952975-46952994 Msa0209330:intron 40.0%
! GAAGTGGGATTCTTGCTATA+TGG + chr2_1:46953003-46953022 Msa0209330:CDS 40.0%
TAATCTTGAGCAGGTTGTTG+AGG + chr2_1:46953109-46953128 Msa0209330:CDS 40.0%
CAGGTTGTTGAGGTTATTGA+GGG + chr2_1:46953119-46953138 Msa0209330:CDS 40.0%
GATGTTACATTGCCTGAGAA+AGG + chr2_1:46953152-46953171 Msa0209330:CDS 40.0%
AGTTTATCCGATAGTCTGTG+AGG + chr2_1:46953369-46953388 Msa0209330:intron 40.0%
GTTTATCCGATAGTCTGTGA+GGG + chr2_1:46953370-46953389 Msa0209330:intron 40.0%
TACGCAAAACCTTGATGTTG+CGG + chr2_1:46953697-46953716 Msa0209330:intron 40.0%
GGCAATCACAGAATACACAA+AGG - chr2_1:46953789-46953808 None:intergenic 40.0%
CTGTGATTGCCTTAAAGTGT+TGG + chr2_1:46953798-46953817 Msa0209330:intron 40.0%
AATACTTACATCACCCCTGT+TGG - chr2_1:46953934-46953953 None:intergenic 40.0%
AAAAGCTGCACATAAAGCAG+AGG + chr2_1:46954178-46954197 Msa0209330:intron 40.0%
GATAGAAAACTCTCCTCCAA+GGG + chr2_1:46954533-46954552 Msa0209330:intron 40.0%
!!! CAGTGGCTCTATTTTAGTGA+AGG - chr2_1:46954564-46954583 None:intergenic 40.0%
ACATTAGGTGAATAGAGCAG+TGG - chr2_1:46954581-46954600 None:intergenic 40.0%
ATGTGCAAATTGGGGTAGTT+AGG - chr2_1:46954662-46954681 None:intergenic 40.0%
! GCATGGTAATGTGCAAATTG+GGG - chr2_1:46954670-46954689 None:intergenic 40.0%
GTAATGTGCTGGAAATAGCA+TGG - chr2_1:46954731-46954750 None:intergenic 40.0%
!! TATCTCTGTTGGTAATGTGC+TGG - chr2_1:46954742-46954761 None:intergenic 40.0%
! AGCAAATCTTTGGTGGCTTT+CGG + chr2_1:46954851-46954870 Msa0209330:intron 40.0%
TCTACTATCCCAGTCCTAAT+GGG - chr2_1:46954948-46954967 None:intergenic 40.0%
TTCTACTATCCCAGTCCTAA+TGG - chr2_1:46954949-46954968 None:intergenic 40.0%
GCTCATATCAACACCATAGA+AGG - chr2_1:46955036-46955055 None:intergenic 40.0%
!! TGGTGTTGATATGAGCACTT+TGG + chr2_1:46955040-46955059 Msa0209330:CDS 40.0%
GCAGAGGAAATACTATCTAC+AGG + chr2_1:46955082-46955101 Msa0209330:CDS 40.0%
ACAAGCCAGCACATAATGTA+GGG - chr2_1:46955190-46955209 None:intergenic 40.0%
TACAAGCCAGCACATAATGT+AGG - chr2_1:46955191-46955210 None:intergenic 40.0%
ATGAATTCCATGTGGGGATT+AGG - chr2_1:46955252-46955271 None:intergenic 40.0%
! TCCCCACATGGAATTCATTT+TGG + chr2_1:46955254-46955273 Msa0209330:intron 40.0%
AGAACATCAACATGTGTTGG+TGG + chr2_1:46955339-46955358 Msa0209330:intron 40.0%
! GAACATCAACATGTGTTGGT+GGG + chr2_1:46955340-46955359 Msa0209330:intron 40.0%
! AGAAAGGGCTTTTGGATCAA+GGG - chr2_1:46955472-46955491 None:intergenic 40.0%
! AAGAAAGGGCTTTTGGATCA+AGG - chr2_1:46955473-46955492 None:intergenic 40.0%
CAGCAAAGTTCATGATTGCA+TGG - chr2_1:46955496-46955515 None:intergenic 40.0%
TGCAATCATGAACTTTGCTG+TGG + chr2_1:46955496-46955515 Msa0209330:intron 40.0%
TCTATCCTTGTTCCACTGTA+AGG + chr2_1:46955638-46955657 Msa0209330:intron 40.0%
CTATCCTTGTTCCACTGTAA+GGG + chr2_1:46955639-46955658 Msa0209330:intron 40.0%
! AGCAGCCGCTATTGTATTTT+TGG + chr2_1:46955666-46955685 Msa0209330:intron 40.0%
ATTTGACAACACTGTTCTGC+AGG + chr2_1:46956135-46956154 Msa0209330:intron 40.0%
TACAACAGACTCCACCTAAT+AGG - chr2_1:46956250-46956269 None:intergenic 40.0%
ATTAGGTGGAGTCTGTTGTA+TGG + chr2_1:46956250-46956269 Msa0209330:intron 40.0%
!! GTCCTGCTAAAGCATTTTTG+AGG - chr2_1:46956285-46956304 None:intergenic 40.0%
CAATACACTATTCGCAACCA+TGG - chr2_1:46956505-46956524 None:intergenic 40.0%
AACAGAACACAGAGATAGAG+CGG + chr2_1:46956541-46956560 Msa0209330:intron 40.0%
GAACCAAAAATCTGAGCAAC+AGG + chr2_1:46956614-46956633 Msa0209330:intron 40.0%
! GTGATTTGTCATAGAGCAGT+TGG + chr2_1:46956817-46956836 Msa0209330:intron 40.0%
GCACTATAGCTCATGTTCAA+TGG - chr2_1:46956858-46956877 None:intergenic 40.0%
CCAAAAGTAGAGGCAATTCA+CGG - chr2_1:46956928-46956947 None:intergenic 40.0%
GCATTTGTCACCAAAAGTAG+AGG - chr2_1:46956938-46956957 None:intergenic 40.0%
!! ACACAGCAGAATTGCTTTTG+CGG - chr2_1:46957015-46957034 None:intergenic 40.0%
GGTGACTATGATCTCACTTT+AGG + chr2_1:46957039-46957058 Msa0209330:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr2_1:46957057-46957076 Msa0209330:intron 40.0%
CTCAAAAATTGTATTGGGGG+AGG - chr2_1:46957282-46957301 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + chr2_1:46957294-46957313 Msa0209330:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG + chr2_1:46957295-46957314 Msa0209330:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG - chr2_1:46957397-46957416 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - chr2_1:46957434-46957453 None:intergenic 40.0%
ACTCCCAAACAAAGCCTTAA+TGG + chr2_1:46957435-46957454 Msa0209330:intron 40.0%
!! CACACCATTAAGGCTTTGTT+TGG - chr2_1:46957442-46957461 None:intergenic 40.0%
AGTCTCCTCTGATGAGATTT+GGG - chr2_1:46957541-46957560 None:intergenic 40.0%
AATTTCTGTAGACGTCGTTG+TGG + chr2_1:46957661-46957680 Msa0209330:intron 40.0%
CTTCATCCACATCAAGTCAT+AGG + chr2_1:46957690-46957709 Msa0209330:CDS 40.0%
!! ACACAGTTTTGTGTTCTCTG+TGG - chr2_1:46957805-46957824 None:intergenic 40.0%
ACAGAGAACACAAAACTGTG+TGG + chr2_1:46957804-46957823 Msa0209330:CDS 40.0%
ACAAAACTGTGTGGATATGG+AGG + chr2_1:46957813-46957832 Msa0209330:CDS 40.0%
CAAAACTGTGTGGATATGGA+GGG + chr2_1:46957814-46957833 Msa0209330:CDS 40.0%
GGTGGTTTGATGTACATTTC+CGG + chr2_1:46957835-46957854 Msa0209330:CDS 40.0%
GTGGTTTGATGTACATTTCC+GGG + chr2_1:46957836-46957855 Msa0209330:CDS 40.0%
ATAGCTATAATGCCCATGCA+AGG - chr2_1:46957875-46957894 None:intergenic 40.0%
TTGCATGGGCATTATAGCTA+TGG + chr2_1:46957874-46957893 Msa0209330:intron 40.0%
GTTTCCTGTTTATGCTTACC+AGG + chr2_1:46957915-46957934 Msa0209330:intron 40.0%
AACTCAATCTCATGTTCAGC+TGG - chr2_1:46957955-46957974 None:intergenic 40.0%
ACAGTAATCTACACTAGGAG+CGG - chr2_1:46957983-46958002 None:intergenic 40.0%
GTGTAGATTACTGTACACAC+TGG + chr2_1:46957989-46958008 Msa0209330:CDS 40.0%
GTAGATTACTGTACACACTG+GGG + chr2_1:46957991-46958010 Msa0209330:CDS 40.0%
ACCCTGTCTCTCATCTATAA+AGG - chr2_1:46958184-46958203 None:intergenic 40.0%
GAATGAAGGTCACAGGTTAT+AGG - chr2_1:46958275-46958294 None:intergenic 40.0%
TGAACTAGAATGAAGGTCAC+AGG - chr2_1:46958282-46958301 None:intergenic 40.0%
CATGTGTAGGAGGATTTAAG+AGG - chr2_1:46958352-46958371 None:intergenic 40.0%
! TTTTCTAATGAGTCGCTCGA+AGG + chr2_1:46958400-46958419 Msa0209330:CDS 40.0%
TTTCTAATGAGTCGCTCGAA+GGG + chr2_1:46958401-46958420 Msa0209330:CDS 40.0%
GAAGGGAAACCATCGTTTAA+TGG + chr2_1:46958418-46958437 Msa0209330:CDS 40.0%
! TAGAGTTTAGAGCATACCGT+GGG - chr2_1:46958563-46958582 None:intergenic 40.0%
! ATAGAGTTTAGAGCATACCG+TGG - chr2_1:46958564-46958583 None:intergenic 40.0%
! ACTTGGTTCTTCCGATCATT+TGG + chr2_1:46958961-46958980 Msa0209330:three_prime_UTR 40.0%
TGTGTGACATGTGACTCATA+AGG + chr2_1:46958987-46959006 Msa0209330:three_prime_UTR 40.0%
GTGTGACATGTGACTCATAA+GGG + chr2_1:46958988-46959007 Msa0209330:three_prime_UTR 40.0%
CAGCATTATTCAGTGATGGT+TGG + chr2_1:46959019-46959038 Msa0209330:three_prime_UTR 40.0%
TGGTTGGATAAACCTCGTAT+TGG + chr2_1:46959035-46959054 Msa0209330:three_prime_UTR 40.0%
ACAAGCTTTGCTTGAAAGTC+GGG - chr2_1:46959069-46959088 None:intergenic 40.0%
CAACCCTGAAACCTTATTGT+AGG + chr2_1:46959213-46959232 Msa0209330:three_prime_UTR 40.0%
GTTAAAGAGGATAGTAGGGT+AGG - chr2_1:46959259-46959278 None:intergenic 40.0%
CACCGTTAAAGAGGATAGTA+GGG - chr2_1:46959263-46959282 None:intergenic 40.0%
TAAAACCTGCACCGTTAAAG+AGG - chr2_1:46959272-46959291 None:intergenic 40.0%
!! TTAGGTCAGGATTGGTTTGG+CGG - chr2_1:46952649-46952668 None:intergenic 45.0%
CATGGTTCTTACTCACTCAG+CGG - chr2_1:46952694-46952713 None:intergenic 45.0%
GCTGAGTGAGTAAGAACCAT+GGG + chr2_1:46952693-46952712 Msa0209330:exon 45.0%
! TAGCGTAGTCGACTTCTTTG+GGG - chr2_1:46952764-46952783 None:intergenic 45.0%
ACCCAAACCCAGTTCAGTTA+AGG - chr2_1:46952911-46952930 None:intergenic 45.0%
! AACTGAACTGGGTTTGGGTT+TGG + chr2_1:46952912-46952931 Msa0209330:intron 45.0%
! ACTGAACTGGGTTTGGGTTT+GGG + chr2_1:46952913-46952932 Msa0209330:intron 45.0%
!!! GTTGTTTTGGATGTTGGTGC+TGG + chr2_1:46952981-46953000 Msa0209330:CDS 45.0%
GCAGGTTGTTGAGGTTATTG+AGG + chr2_1:46953118-46953137 Msa0209330:CDS 45.0%
GGTTATTGAGGGTTCTGTTG+AGG + chr2_1:46953130-46953149 Msa0209330:CDS 45.0%
TCTAGTCCCTCACAGACTAT+CGG - chr2_1:46953379-46953398 None:intergenic 45.0%
CAATTGTTGCCGCAACATCA+AGG - chr2_1:46953709-46953728 None:intergenic 45.0%
GGATAGAAAACTCTCCTCCA+AGG + chr2_1:46954532-46954551 Msa0209330:intron 45.0%
TTTAGTGAAGGGCAAACCCT+TGG - chr2_1:46954552-46954571 None:intergenic 45.0%
! TTTGGCAAAGCCTTTTGCTG+AGG + chr2_1:46955058-46955077 Msa0209330:CDS 45.0%
GAACAATCCTAATCCCCACA+TGG + chr2_1:46955242-46955261 Msa0209330:intron 45.0%
! GAAAGGGCTTTTGGATCAAG+GGG - chr2_1:46955471-46955490 None:intergenic 45.0%
! TGCATGGAAGAAAGGGCTTT+TGG - chr2_1:46955480-46955499 None:intergenic 45.0%
TGCAACTGTGTAAGTGGCTT+TGG + chr2_1:46955530-46955549 Msa0209330:intron 45.0%
!! TCAAGAGCGCTGTCAAATTG+AGG + chr2_1:46955560-46955579 Msa0209330:intron 45.0%
ATGTCCCTTACAGTGGAACA+AGG - chr2_1:46955646-46955665 None:intergenic 45.0%
TCATGTTGAAGTTGGGATGG+AGG - chr2_1:46955910-46955929 None:intergenic 45.0%
AGGTCATGTTGAAGTTGGGA+TGG - chr2_1:46955913-46955932 None:intergenic 45.0%
GAGGAGGTCATGTTGAAGTT+GGG - chr2_1:46955917-46955936 None:intergenic 45.0%
! CTACATCTGCTTGCTGAAAC+TGG + chr2_1:46956019-46956038 Msa0209330:intron 45.0%
CTTCGCTATTGGGGAAATTG+TGG - chr2_1:46956053-46956072 None:intergenic 45.0%
ATTTCCCCAATAGCGAAGCT+TGG + chr2_1:46956055-46956074 Msa0209330:intron 45.0%
CTATCCAAGCTTCGCTATTG+GGG - chr2_1:46956062-46956081 None:intergenic 45.0%
GCTATCCAAGCTTCGCTATT+GGG - chr2_1:46956063-46956082 None:intergenic 45.0%
TGCTATCCAAGCTTCGCTAT+TGG - chr2_1:46956064-46956083 None:intergenic 45.0%
GTTCTGCAGGTCCAATTCAT+TGG + chr2_1:46956148-46956167 Msa0209330:intron 45.0%
TAAAAGTTGAAGCCTGCGTG+CGG + chr2_1:46956469-46956488 Msa0209330:intron 45.0%
GATAGAGCGGAACAGTGATT+AGG + chr2_1:46956554-46956573 Msa0209330:intron 45.0%
GCATGCTGTTCTAATCTTCG+CGG - chr2_1:46956590-46956609 None:intergenic 45.0%
! TGCCCTGTTGCTCAGATTTT+TGG - chr2_1:46956620-46956639 None:intergenic 45.0%
AAAAATCTGAGCAACAGGGC+AGG + chr2_1:46956619-46956638 Msa0209330:intron 45.0%
AAAATCTGAGCAACAGGGCA+GGG + chr2_1:46956620-46956639 Msa0209330:intron 45.0%
! CCGTGAATTGCCTCTACTTT+TGG + chr2_1:46956925-46956944 Msa0209330:intron 45.0%
AGCTGTTTACATCGATGTGC+TGG + chr2_1:46956971-46956990 Msa0209330:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr2_1:46957061-46957080 Msa0209330:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr2_1:46957062-46957081 Msa0209330:intron 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG + chr2_1:46957296-46957315 Msa0209330:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG - chr2_1:46957359-46957378 None:intergenic 45.0%
ATAGAAGACATTGGGAGGAG+AGG - chr2_1:46957360-46957379 None:intergenic 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - chr2_1:46957388-46957407 None:intergenic 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG - chr2_1:46957401-46957420 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr2_1:46957062-46957081 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr2_1:46957061-46957080 None:intergenic 45.0%
CTCTGATGAGATTTGGGCAT+GGG - chr2_1:46957535-46957554 None:intergenic 45.0%
CAGTCTCCTCTGATGAGATT+TGG - chr2_1:46957542-46957561 None:intergenic 45.0%
GCAGTTCCTATGACTTGATG+TGG - chr2_1:46957699-46957718 None:intergenic 45.0%
CATCAAGTCATAGGAACTGC+TGG + chr2_1:46957699-46957718 Msa0209330:CDS 45.0%
! AGGAACTGCTGGTCTAGTAA+AGG + chr2_1:46957710-46957729 Msa0209330:CDS 45.0%
TAAGATGCTCTGACCTTGCA+TGG + chr2_1:46957859-46957878 Msa0209330:intron 45.0%
AAGATGCTCTGACCTTGCAT+GGG + chr2_1:46957860-46957879 Msa0209330:intron 45.0%
TCACCATCACTCACATGTGT+AGG - chr2_1:46958365-46958384 None:intergenic 45.0%
GGGAAACCATCGTTTAATGG+AGG + chr2_1:46958421-46958440 Msa0209330:CDS 45.0%
GCTCAACCTCCATTAAACGA+TGG - chr2_1:46958430-46958449 None:intergenic 45.0%
CGTTTAATGGAGGTTGAGCT+TGG + chr2_1:46958431-46958450 Msa0209330:CDS 45.0%
!! CGGGAAAAAGTACCAATACG+AGG - chr2_1:46959050-46959069 None:intergenic 45.0%
GCACCGTTAAAGAGGATAGT+AGG - chr2_1:46959264-46959283 None:intergenic 45.0%
ACTATCCTCTTTAACGGTGC+AGG + chr2_1:46959264-46959283 Msa0209330:three_prime_UTR 45.0%
!!! ATAAGAAAATATTATTTTTT+CGG + chr2_1:46953488-46953507 Msa0209330:intron 5.0%
!!! TTTAAAAATATTTATTTTGT+AGG + chr2_1:46954892-46954911 Msa0209330:intron 5.0%
!! AAATTAAAATATGTATAAAT+TGG - chr2_1:46957646-46957665 None:intergenic 5.0%
!! TTGGTTTGGCGGTAGGGTTT+AGG - chr2_1:46952638-46952657 None:intergenic 50.0%
!! TCAGGATTGGTTTGGCGGTA+GGG - chr2_1:46952644-46952663 None:intergenic 50.0%
CGCTGAGTGAGTAAGAACCA+TGG + chr2_1:46952692-46952711 Msa0209330:exon 50.0%
!!! GTTTTCGGAAGAAGTGCCCA+TGG - chr2_1:46952712-46952731 None:intergenic 50.0%
! GTAGTCGACTTCTTTGGGGA+CGG - chr2_1:46952760-46952779 None:intergenic 50.0%
GCTCTCAGATCGTGTTCGTA+TGG + chr2_1:46952827-46952846 Msa0209330:CDS 50.0%
!! TTGGATGTTGGTGCTGGAAG+TGG + chr2_1:46952987-46953006 Msa0209330:CDS 50.0%
!! TGGATGTTGGTGCTGGAAGT+GGG + chr2_1:46952988-46953007 Msa0209330:CDS 50.0%
GCTATATGGTCAGCTCAAGC+AGG + chr2_1:46953017-46953036 Msa0209330:CDS 50.0%
AGCTCAAGCAGGTGCAAAGA+AGG + chr2_1:46953028-46953047 Msa0209330:CDS 50.0%
ATCCTAGTCATGCTCGCATG+TGG + chr2_1:46954916-46954935 Msa0209330:CDS 50.0%
ATCCACATGCGAGCATGACT+AGG - chr2_1:46954921-46954940 None:intergenic 50.0%
TAGTCATGCTCGCATGTGGA+TGG + chr2_1:46954920-46954939 Msa0209330:CDS 50.0%
GGCGATTACCAGTCAGCTAT+GGG + chr2_1:46954978-46954997 Msa0209330:CDS 50.0%
TTCCTCTGCTCCTCAGCAAA+AGG - chr2_1:46955071-46955090 None:intergenic 50.0%
GTCAGCCCTACATTATGTGC+TGG + chr2_1:46955182-46955201 Msa0209330:intron 50.0%
! TCAACATGTGTTGGTGGGTC+AGG + chr2_1:46955345-46955364 Msa0209330:intron 50.0%
TGTTGAAGTTGGGATGGAGG+AGG - chr2_1:46955907-46955926 None:intergenic 50.0%
GGAGGAGGTCATGTTGAAGT+TGG - chr2_1:46955918-46955937 None:intergenic 50.0%
AGACTCACTGGAAATGGAGG+AGG - chr2_1:46955933-46955952 None:intergenic 50.0%
TGTCGGAGACTCACTGGAAA+TGG - chr2_1:46955939-46955958 None:intergenic 50.0%
GAGATATGTCGGAGACTCAC+TGG - chr2_1:46955945-46955964 None:intergenic 50.0%
AGCAGATGTAGCAGCAACAG+TGG - chr2_1:46956010-46956029 None:intergenic 50.0%
GCGAAGCTTGGATAGCATTG+TGG + chr2_1:46956067-46956086 Msa0209330:intron 50.0%
AAATCTGAGCAACAGGGCAG+GGG + chr2_1:46956621-46956640 Msa0209330:intron 50.0%
GTGCAATGCAAGCAAGCAGT+AGG + chr2_1:46956789-46956808 Msa0209330:intron 50.0%
TGCAAGCAAGCAGTAGGTGT+AGG + chr2_1:46956795-46956814 Msa0209330:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr2_1:46957060-46957079 Msa0209330:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG + chr2_1:46957067-46957086 Msa0209330:intron 50.0%
!!! GGGTTTTGAGGGGTTATGGA+GGG - chr2_1:46957261-46957280 None:intergenic 50.0%
!!! AGGGTTTTGAGGGGTTATGG+AGG - chr2_1:46957262-46957281 None:intergenic 50.0%
!!! TATTGGGGGAGGGTTTTGAG+GGG - chr2_1:46957271-46957290 None:intergenic 50.0%
!! GTATTGGGGGAGGGTTTTGA+GGG - chr2_1:46957272-46957291 None:intergenic 50.0%
! TGTATTGGGGGAGGGTTTTG+AGG - chr2_1:46957273-46957292 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr2_1:46957060-46957079 None:intergenic 50.0%
CCTCTGATGAGATTTGGGCA+TGG - chr2_1:46957536-46957555 None:intergenic 50.0%
CCATGCCCAAATCTCATCAG+AGG + chr2_1:46957533-46957552 Msa0209330:intron 50.0%
TGACTGTTTGACTGCCACAG+TGG + chr2_1:46957737-46957756 Msa0209330:CDS 50.0%
TTCCTCTATGTCTGCCACTG+TGG - chr2_1:46957754-46957773 None:intergenic 50.0%
AACTGTGTGGATATGGAGGG+TGG + chr2_1:46957817-46957836 Msa0209330:CDS 50.0%
! CAAGGTCAGAGCATCTTACC+CGG - chr2_1:46957857-46957876 None:intergenic 50.0%
CGTCCCTGGTAAGCATAAAC+AGG - chr2_1:46957922-46957941 None:intergenic 50.0%
GTAATCTACACTAGGAGCGG+TGG - chr2_1:46957980-46957999 None:intergenic 50.0%
CCATCACTCACATGTGTAGG+AGG - chr2_1:46958362-46958381 None:intergenic 50.0%
CCTCCTACACATGTGAGTGA+TGG + chr2_1:46958359-46958378 Msa0209330:CDS 50.0%
GAGCTTCAAGCAGTATCCCA+CGG + chr2_1:46958544-46958563 Msa0209330:three_prime_UTR 50.0%
!! GTCAGGATTGGTTTGGCGGT+AGG - chr2_1:46952645-46952664 None:intergenic 55.0%
GGTTCTTACTCACTCAGCGG+TGG - chr2_1:46952691-46952710 None:intergenic 55.0%
ACTTCTTCCGAAAACGCCGC+CGG + chr2_1:46952717-46952736 Msa0209330:CDS 55.0%
TCATATGTGCTCGTGACCGC+TGG + chr2_1:46953902-46953921 Msa0209330:CDS 55.0%
!! ACCGCTGGCTCAAACCAACA+GGG + chr2_1:46953917-46953936 Msa0209330:CDS 55.0%
AGTGAAGGGCAAACCCTTGG+AGG - chr2_1:46954549-46954568 None:intergenic 55.0%
GCATGTGGATGGCACCCATT+AGG + chr2_1:46954931-46954950 Msa0209330:CDS 55.0%
TGGATGGCACCCATTAGGAC+TGG + chr2_1:46954936-46954955 Msa0209330:CDS 55.0%
GGATGGCACCCATTAGGACT+GGG + chr2_1:46954937-46954956 Msa0209330:CDS 55.0%
GGGCGATTACCAGTCAGCTA+TGG + chr2_1:46954977-46954996 Msa0209330:CDS 55.0%
ACCAGTCAGCTATGGGCGAT+TGG + chr2_1:46954985-46955004 Msa0209330:CDS 55.0%
! AGCCTTTTGCTGAGGAGCAG+AGG + chr2_1:46955066-46955085 Msa0209330:CDS 55.0%
GGCTGCTATGTCCCTTACAG+TGG - chr2_1:46955653-46955672 None:intergenic 55.0%
CGGAGACTCACTGGAAATGG+AGG - chr2_1:46955936-46955955 None:intergenic 55.0%
CGTGCGGTTGAATGATGCCA+TGG + chr2_1:46956485-46956504 Msa0209330:intron 55.0%
GAAATGTGCGCTAGCTCAGC+TGG + chr2_1:46956753-46956772 Msa0209330:intron 55.0%
!! AGAGCAGTTGGTGTTGCACG+AGG + chr2_1:46956829-46956848 Msa0209330:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + chr2_1:46957066-46957085 Msa0209330:intron 55.0%
!!! GGGAGGGTTTTGAGGGGTTA+TGG - chr2_1:46957265-46957284 None:intergenic 55.0%
ACATTGGGAGGAGAGGGCTT+TGG - chr2_1:46957353-46957372 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr2_1:46957424-46957443 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr2_1:46957066-46957085 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr2_1:46957065-46957084 None:intergenic 55.0%
TGCCACAGTGGCAGACATAG+AGG + chr2_1:46957749-46957768 Msa0209330:CDS 55.0%
TGCTTACCAGGGACGAAGTG+AGG + chr2_1:46957927-46957946 Msa0209330:intron 55.0%
GCTTGAAGCTCCGCGAACAA+AGG - chr2_1:46958535-46958554 None:intergenic 55.0%
! GTCGACTTCTTTGGGGACGG+CGG - chr2_1:46952757-46952776 None:intergenic 60.0%
!! GACCGCTGGCTCAAACCAAC+AGG + chr2_1:46953916-46953935 Msa0209330:CDS 60.0%
!! CCCCTGTTGGTTTGAGCCAG+CGG - chr2_1:46953921-46953940 None:intergenic 60.0%
!! CCGCTGGCTCAAACCAACAG+GGG + chr2_1:46953918-46953937 Msa0209330:CDS 60.0%
GCCAATCGCCCATAGCTGAC+TGG - chr2_1:46954989-46955008 None:intergenic 60.0%
GGCATCATTCAACCGCACGC+AGG - chr2_1:46956484-46956503 None:intergenic 60.0%
TGCGCTAGCTCAGCTGGACT+GGG + chr2_1:46956759-46956778 Msa0209330:intron 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG + chr2_1:46957071-46957090 Msa0209330:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr2_1:46957072-46957091 Msa0209330:intron 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG - chr2_1:46957350-46957369 None:intergenic 60.0%
CTGGATCCTCACTTCGTCCC+TGG - chr2_1:46957936-46957955 None:intergenic 60.0%
CTGTACACACTGGGGTCAGC+AGG + chr2_1:46957999-46958018 Msa0209330:CDS 60.0%
TCTTCCGAAAACGCCGCCGG+TGG + chr2_1:46952720-46952739 Msa0209330:CDS 65.0%
GTGCGCTAGCTCAGCTGGAC+TGG + chr2_1:46956758-46956777 Msa0209330:intron 65.0%
GCGCTAGCTCAGCTGGACTG+GGG + chr2_1:46956760-46956779 Msa0209330:intron 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG + chr2_1:46957070-46957089 Msa0209330:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG + chr2_1:46957075-46957094 Msa0209330:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG + chr2_1:46957076-46957095 Msa0209330:intron 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG + chr2_1:46957083-46957102 Msa0209330:intron 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG + chr2_1:46957084-46957103 Msa0209330:intron 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG + chr2_1:46957085-46957104 Msa0209330:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG - chr2_1:46957419-46957438 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - chr2_1:46957420-46957439 None:intergenic 65.0%
TCCGAAAACGCCGCCGGTGG+TGG + chr2_1:46952723-46952742 Msa0209330:CDS 70.0%
! GCCACCACCGGCGGCGTTTT+CGG - chr2_1:46952727-46952746 None:intergenic 70.0%
! CTTTGGGGACGGCGGTGCCT+CGG - chr2_1:46952749-46952768 None:intergenic 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG + chr2_1:46957082-46957101 Msa0209330:intron 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG + chr2_1:46957086-46957105 Msa0209330:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG + chr2_1:46957090-46957109 Msa0209330:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG - chr2_1:46957409-46957428 None:intergenic 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG - chr2_1:46957415-46957434 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG - chr2_1:46957416-46957435 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG - chr2_1:46957421-46957440 None:intergenic 70.0%
!! AACGCCGCCGGTGGTGGCCG+AGG + chr2_1:46952729-46952748 Msa0209330:CDS 80.0%
! GGTGCCTCGGCCACCACCGG+CGG - chr2_1:46952736-46952755 None:intergenic 80.0%
! GGCGGTGCCTCGGCCACCAC+CGG - chr2_1:46952739-46952758 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 46952612 46959321 46952612 ID=Msa0209330;Name=Msa0209330
chr2_1 mRNA 46952612 46959321 46952612 ID=Msa0209330-mRNA-1;Parent=Msa0209330;Name=Msa0209330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=99|1|1|1|0.85|0.75|8|511|374
chr2_1 exon 46952612 46952899 46952612 ID=Msa0209330-mRNA-1:exon:13338;Parent=Msa0209330-mRNA-1
chr2_1 exon 46952981 46953173 46952981 ID=Msa0209330-mRNA-1:exon:13339;Parent=Msa0209330-mRNA-1
chr2_1 exon 46953839 46953944 46953839 ID=Msa0209330-mRNA-1:exon:13340;Parent=Msa0209330-mRNA-1
chr2_1 exon 46954914 46955103 46954914 ID=Msa0209330-mRNA-1:exon:13341;Parent=Msa0209330-mRNA-1
chr2_1 exon 46957672 46957857 46957672 ID=Msa0209330-mRNA-1:exon:13342;Parent=Msa0209330-mRNA-1
chr2_1 exon 46957937 46958020 46957937 ID=Msa0209330-mRNA-1:exon:13343;Parent=Msa0209330-mRNA-1
chr2_1 exon 46958344 46958565 46958344 ID=Msa0209330-mRNA-1:exon:13344;Parent=Msa0209330-mRNA-1
chr2_1 exon 46958856 46959321 46958856 ID=Msa0209330-mRNA-1:exon:13345;Parent=Msa0209330-mRNA-1
chr2_1 five_prime_UTR 46952612 46952710 46952612 ID=Msa0209330-mRNA-1:five_prime_utr;Parent=Msa0209330-mRNA-1
chr2_1 CDS 46952711 46952899 46952711 ID=Msa0209330-mRNA-1:cds;Parent=Msa0209330-mRNA-1
chr2_1 CDS 46952981 46953173 46952981 ID=Msa0209330-mRNA-1:cds;Parent=Msa0209330-mRNA-1
chr2_1 CDS 46953839 46953944 46953839 ID=Msa0209330-mRNA-1:cds;Parent=Msa0209330-mRNA-1
chr2_1 CDS 46954914 46955103 46954914 ID=Msa0209330-mRNA-1:cds;Parent=Msa0209330-mRNA-1
chr2_1 CDS 46957672 46957857 46957672 ID=Msa0209330-mRNA-1:cds;Parent=Msa0209330-mRNA-1
chr2_1 CDS 46957937 46958020 46957937 ID=Msa0209330-mRNA-1:cds;Parent=Msa0209330-mRNA-1
chr2_1 CDS 46958344 46958520 46958344 ID=Msa0209330-mRNA-1:cds;Parent=Msa0209330-mRNA-1
chr2_1 three_prime_UTR 46958521 46958565 46958521 ID=Msa0209330-mRNA-1:three_prime_utr;Parent=Msa0209330-mRNA-1
chr2_1 three_prime_UTR 46958856 46959321 46958856 ID=Msa0209330-mRNA-1:three_prime_utr;Parent=Msa0209330-mRNA-1
Gene Sequence

>Msa0209330

ATGGGCACTTCTTCCGAAAACGCCGCCGGTGGTGGCCGAGGCACCGCCGTCCCCAAAGAAGTCGACTACGCTAATTACTTTTGCACCTACTCCTTTCTCTATCACCAAAAAGAAATGCTCTCAGATCGTGTTCGTATGGATGCTTACTTCAACGCTGTTTTTGAAAACAAACACCACTTTAAAGACAAGGTTGTTTTGGATGTTGGTGCTGGAAGTGGGATTCTTGCTATATGGTCAGCTCAAGCAGGTGCAAAGAAGGTTTATGCTGTTGAAGCTACTAAGATGTCGGAACATGCTCGTGCGCTTGTGAAATCGAATAATCTTGAGCAGGTTGTTGAGGTTATTGAGGGTTCTGTTGAGGATGTTACATTGCCTGAGAAAGTTGATGTTATCATCTCTGAATGGATGGGTTATTTTCTTTTGCGAGAATCTATGTTTGATTCTGTCATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGGGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATTAGGACTGGGATAGTAGAACAAAAGTTGGGCGATTACCAGTCAGCTATGGGCGATTGGCACAACTTTGTCGATGAAACAAAAGCCTTCTATGGTGTTGATATGAGCACTTTGGCAAAGCCTTTTGCTGAGGAGCAGAGGAAATACTATCTACAGACGTCGTTGTGGAGCAATCTTCATCCACATCAAGTCATAGGAACTGCTGGTCTAGTAAAGGAAATTGACTGTTTGACTGCCACAGTGGCAGACATAGAGGAAGTCAGATCAAACTTTTCTCTGTCAATAACCACAGAGAACACAAAACTGTGTGGATATGGAGGGTGGTTTGATGTACATTTCCGGGGACGAAGTGAGGATCCAGCTGAACATGAGATTGAGTTAACCACCGCTCCTAGTGTAGATTACTGTACACACTGGGGTCAGCAGGTTTTCCTCTTAAATCCTCCTACACATGTGAGTGATGGTGATGAGTTAACTGTTAATTTTCTAATGAGTCGCTCGAAGGGAAACCATCGTTTAATGGAGGTTGAGCTTGGCTGTGAGATTCAAAAGCATTCGGGCAAGCTTGCTACACCTTTCAAAAATAAGTACTATATTGAATGA
Protein sequence

>Msa0209330

MGTSSENAAGGGRGTAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKSNNLEQVVEVIEGSVEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIVEQKLGDYQSAMGDWHNFVDETKAFYGVDMSTLAKPFAEEQRKYYLQTSLWSNLHPHQVIGTAGLVKEIDCLTATVADIEEVRSNFSLSITTENTKLCGYGGWFDVHFRGRSEDPAEHEIELTTAPSVDYCTHWGQQVFLLNPPTHVSDGDELTVNFLMSRSKGNHRLMEVELGCEIQKHSGKLATPFKNKYYIE*