AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0207710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207710 MtrunA17_Chr2g0306801 93.814 388 10 1 1 388 1 374 0.0 760
Msa0207710 MtrunA17_Chr1g0165131 38.136 354 169 9 26 366 79 395 7.39e-64 209
Msa0207710 MtrunA17_Chr4g0067351 37.461 323 167 9 26 347 142 430 1.63e-52 182
Msa0207710 MtrunA17_Chr2g0295951 36.223 323 171 8 26 347 144 432 1.69e-51 180
Msa0207710 MtrunA17_Chr6g0488051 31.492 362 201 10 26 386 65 380 4.43e-49 170
Msa0207710 MtrunA17_Chr1g0211591 37.970 266 132 8 46 304 1 240 3.98e-47 161
Msa0207710 MtrunA17_Chr3g0082021 33.714 350 164 15 25 345 255 565 5.25e-40 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207710 AT1G04870.2 69.892 372 98 1 17 388 26 383 0.0 566
Msa0207710 AT1G04870.1 64.966 294 89 1 95 388 1 280 3.04e-148 421
Msa0207710 AT3G20020.1 34.054 370 182 7 26 366 83 419 1.17e-60 202
Msa0207710 AT3G20020.3 34.853 373 175 8 26 366 83 419 1.66e-60 202
Msa0207710 AT3G06930.2 34.758 351 189 11 2 347 121 436 2.38e-52 182
Msa0207710 AT3G06930.1 34.758 351 189 11 2 347 121 436 2.94e-52 182
Msa0207710 AT4G29510.1 32.486 354 195 8 26 378 72 382 1.68e-51 177
Msa0207710 AT5G49020.1 36.533 323 170 11 26 347 151 439 5.55e-51 179
Msa0207710 AT5G49020.2 36.533 323 170 11 26 347 149 437 5.88e-51 179
Msa0207710 AT3G20020.2 31.622 370 169 8 26 366 83 397 8.66e-51 176
Msa0207710 AT2G19670.1 32.370 346 182 9 26 366 48 346 4.08e-50 172
Msa0207710 AT3G12270.1 32.948 346 167 12 25 349 244 545 3.92e-40 150

Find 140 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATCCTACAATAAGGTTTC+AGG 0.177563 2_1:+40352790 None:intergenic
ATCGAACTGTACGGTTATTA+AGG 0.177944 2_1:-40353125 Msa0207710:three_prime_UTR
TCCCCACATGGAATTCATTT+TGG 0.201851 2_1:-40356808 Msa0207710:intron
GAAATTTGTATAGGTTGTTT+TGG 0.266798 2_1:-40359102 Msa0207710:intron
TGTACAACAGTTATTTCTTT+TGG 0.275267 2_1:-40352817 Msa0207710:three_prime_UTR
GGTGGTTTGATGTACATTTC+CGG 0.276872 2_1:-40354177 Msa0207710:CDS
ATTAGCGTAGTCGACTTCTT+TGG 0.288507 2_1:+40359304 None:intergenic
ATGAATTCCATGTGGGGATT+AGG 0.289622 2_1:+40356813 None:intergenic
TTCTACTATCCCAGTCCTAA+TGG 0.297541 2_1:+40357116 None:intergenic
TTAGCGTAGTCGACTTCTTT+GGG 0.302924 2_1:+40359305 None:intergenic
TCTACTCTAATCCTACAATA+AGG 0.346144 2_1:+40352783 None:intergenic
GATGAAACAAAAGCCTTCTA+TGG 0.355790 2_1:-40357042 Msa0207710:CDS
ACTTGGTTCTTCCGATCATT+TGG 0.357148 2_1:-40353048 Msa0207710:three_prime_UTR
AACACAAAACTGTGTGGATA+TGG 0.358771 2_1:-40354202 Msa0207710:CDS
CAACCCTGAAACCTTATTGT+AGG 0.361894 2_1:-40352794 Msa0207710:three_prime_UTR
GAAGGGAAACCATCGTTTAA+TGG 0.372426 2_1:-40353594 Msa0207710:CDS
GTGGTTTGATGTACATTTCC+GGG 0.373727 2_1:-40354176 Msa0207710:intron
TTGGTTTGGCGGTAGGGTTT+AGG 0.379205 2_1:+40359432 None:intergenic
GACCGCTGGCTCAAACCAAC+AGG 0.380824 2_1:-40358154 Msa0207710:CDS
TCGAACTGTACGGTTATTAA+GGG 0.392893 2_1:-40353124 Msa0207710:three_prime_UTR
GCACCGTTAAAGAGGATAGT+AGG 0.395495 2_1:+40352746 None:intergenic
TTGGATGTTGGTGCTGGAAG+TGG 0.397747 2_1:-40359083 Msa0207710:CDS
AACGCCGCCGGTGGTGGCCG+AGG 0.402656 2_1:-40359338 Msa0207710:CDS
CTGTGAGATTCAAAAGCATT+CGG 0.404202 2_1:-40353558 Msa0207710:CDS
GCTCATATCAACACCATAGA+AGG 0.404592 2_1:+40357029 None:intergenic
TCAGGATTGGTTTGGCGGTA+GGG 0.411845 2_1:+40359426 None:intergenic
ACAAGCTTTGCTTGAAAGTC+GGG 0.412753 2_1:+40352943 None:intergenic
TCCGAAAACGCCGCCGGTGG+TGG 0.416415 2_1:-40359344 Msa0207710:CDS
ATTTATTGATTATTTAATTG+TGG 0.425146 2_1:-40352869 Msa0207710:three_prime_UTR
TACCCTACTATCCTCTTTAA+CGG 0.429025 2_1:-40352749 Msa0207710:three_prime_UTR
CAGGTTGTTGAGGTTATTGA+GGG 0.437694 2_1:-40358951 Msa0207710:CDS
CGTTTAATGGAGGTTGAGCT+TGG 0.443414 2_1:-40353581 Msa0207710:CDS
CTTCATCCACATCAAGTCAT+AGG 0.443890 2_1:-40354322 Msa0207710:CDS
AATCCTACAATAAGGTTTCA+GGG 0.448390 2_1:+40352791 None:intergenic
TCTACTATCCCAGTCCTAAT+GGG 0.449075 2_1:+40357117 None:intergenic
GGCGGTGCCTCGGCCACCAC+CGG 0.450973 2_1:+40359331 None:intergenic
TGGATGTTGGTGCTGGAAGT+GGG 0.452123 2_1:-40359082 Msa0207710:CDS
GAAGTGGGATTCTTGCTATA+TGG 0.455599 2_1:-40359067 Msa0207710:CDS
GCATGTGGATGGCACCCATT+AGG 0.455721 2_1:-40357131 Msa0207710:CDS
CATACAAACAAACCTTTCTC+AGG 0.456902 2_1:+40358906 None:intergenic
GCAGGTTGTTGAGGTTATTG+AGG 0.459237 2_1:-40358952 Msa0207710:CDS
GATGTTACATTGCCTGAGAA+AGG 0.461263 2_1:-40358918 Msa0207710:intron
AACTCAATCTCATGTTCAGC+TGG 0.461498 2_1:+40354060 None:intergenic
TTCCTCTGCTCCTCAGCAAA+AGG 0.461816 2_1:+40356994 None:intergenic
GTCAGGATTGGTTTGGCGGT+AGG 0.462470 2_1:+40359425 None:intergenic
ACTATCCTCTTTAACGGTGC+AGG 0.462692 2_1:-40352743 Msa0207710:three_prime_UTR
TCATATGTGCTCGTGACCGC+TGG 0.468854 2_1:-40358168 Msa0207710:CDS
TAAAACCTGCACCGTTAAAG+AGG 0.472216 2_1:+40352738 None:intergenic
TGTGAGATTCAAAAGCATTC+GGG 0.473426 2_1:-40353557 Msa0207710:CDS
CTTTGGGGACGGCGGTGCCT+CGG 0.475277 2_1:+40359321 None:intergenic
TTTATTGATTATTTAATTGT+GGG 0.477910 2_1:-40352868 Msa0207710:three_prime_UTR
GGGCGATTACCAGTCAGCTA+TGG 0.480043 2_1:-40357085 Msa0207710:CDS
AGCTCAAGCAGGTGCAAAGA+AGG 0.480270 2_1:-40359042 Msa0207710:CDS
CTGTACACACTGGGGTCAGC+AGG 0.481201 2_1:-40354013 Msa0207710:intron
TTAGGTCAGGATTGGTTTGG+CGG 0.494154 2_1:+40359421 None:intergenic
TACAAGCTTTGCTTGAAAGT+CGG 0.495762 2_1:+40352942 None:intergenic
CAGCATTATTCAGTGATGGT+TGG 0.501524 2_1:-40352990 Msa0207710:three_prime_UTR
TGGGATAGTAGAACAAAAGT+TGG 0.503612 2_1:-40357106 Msa0207710:CDS
ACCAGTCAGCTATGGGCGAT+TGG 0.509747 2_1:-40357077 Msa0207710:CDS
CATCAAGTCATAGGAACTGC+TGG 0.510644 2_1:-40354313 Msa0207710:CDS
CCCCTGTTGGTTTGAGCCAG+CGG 0.514302 2_1:+40358152 None:intergenic
GGTTATTGAGGGTTCTGTTG+AGG 0.518633 2_1:-40358940 Msa0207710:CDS
GTGTGACATGTGACTCATAA+GGG 0.519310 2_1:-40353021 Msa0207710:three_prime_UTR
GCAGAGGAAATACTATCTAC+AGG 0.521867 2_1:-40356980 Msa0207710:CDS
TGGATGGCACCCATTAGGAC+TGG 0.527259 2_1:-40357126 Msa0207710:CDS
TGTTATCATCTCTGAATGGA+TGG 0.530239 2_1:-40358227 Msa0207710:CDS
GGCGATTACCAGTCAGCTAT+GGG 0.531624 2_1:-40357084 Msa0207710:CDS
TACTAACCTTGTCTTTAAAG+TGG 0.532555 2_1:+40359183 None:intergenic
TGTTTACAGAAGAAAGCAGT+TGG 0.534384 2_1:-40353084 Msa0207710:three_prime_UTR
GCCAATCGCCCATAGCTGAC+TGG 0.534934 2_1:+40357076 None:intergenic
GCTCTCAGATCGTGTTCGTA+TGG 0.535538 2_1:-40359240 Msa0207710:CDS
AATACTTACATCACCCCTGT+TGG 0.538492 2_1:+40358139 None:intergenic
TGTTCAGCATTATTCAGTGA+TGG 0.540471 2_1:-40352994 Msa0207710:three_prime_UTR
TTTCTAATGAGTCGCTCGAA+GGG 0.540973 2_1:-40353611 Msa0207710:CDS
TAATCTTGAGCAGGTTGTTG+AGG 0.544159 2_1:-40358961 Msa0207710:CDS
TTCAATCTTATCGAACTGTA+CGG 0.544210 2_1:-40353134 Msa0207710:three_prime_UTR
AGGAACTGCTGGTCTAGTAA+AGG 0.544394 2_1:-40354302 Msa0207710:CDS
GAAATCGAATAATCTTGAGC+AGG 0.548053 2_1:-40358970 Msa0207710:CDS
GCTATATGGTCAGCTCAAGC+AGG 0.548853 2_1:-40359053 Msa0207710:CDS
GGGATAGTAGAACAAAAGTT+GGG 0.555999 2_1:-40357105 Msa0207710:CDS
TGTGTGACATGTGACTCATA+AGG 0.556044 2_1:-40353022 Msa0207710:three_prime_UTR
CCATCACTCACATGTGTAGG+AGG 0.557201 2_1:+40353653 None:intergenic
AATAACTGTTGTACAATGGA+AGG 0.559071 2_1:+40352825 None:intergenic
GTTAAAGAGGATAGTAGGGT+AGG 0.565436 2_1:+40352751 None:intergenic
AGTTTAGATTCCTTTGTTCG+CGG 0.567958 2_1:-40353490 Msa0207710:three_prime_UTR
TAGTCATGCTCGCATGTGGA+TGG 0.569852 2_1:-40357142 Msa0207710:CDS
AACCAAAATGAATTCCATGT+GGG 0.571376 2_1:+40356806 None:intergenic
CACCGTTAAAGAGGATAGTA+GGG 0.571415 2_1:+40352747 None:intergenic
TTGGTGATAGAGAAAGGAGT+AGG 0.571481 2_1:+40359271 None:intergenic
GTTTAAAGAGCAATAAATAA+CGG 0.572222 2_1:-40359462 None:intergenic
AAGAAATAACTGTTGTACAA+TGG 0.572673 2_1:+40352821 None:intergenic
ATCCACATGCGAGCATGACT+AGG 0.578485 2_1:+40357144 None:intergenic
GGATGGCACCCATTAGGACT+GGG 0.582000 2_1:-40357125 Msa0207710:CDS
TAGCGTAGTCGACTTCTTTG+GGG 0.583467 2_1:+40359306 None:intergenic
TGGTTGGATAAACCTCGTAT+TGG 0.584299 2_1:-40352974 Msa0207710:three_prime_UTR
GGTGCCTCGGCCACCACCGG+CGG 0.585507 2_1:+40359334 None:intergenic
ATCCTAGTCATGCTCGCATG+TGG 0.586013 2_1:-40357146 Msa0207710:CDS
TGCTTACCAGGGACGAAGTG+AGG 0.588452 2_1:-40354085 Msa0207710:intron
GTCACACAAAACCAAATGAT+CGG 0.588979 2_1:+40353037 None:intergenic
TGTAGATTACTGTACACACT+GGG 0.591513 2_1:-40354022 Msa0207710:CDS
TTAAAGAGGATAGTAGGGTA+GGG 0.591600 2_1:+40352752 None:intergenic
GCTTGAAGCTCCGCGAACAA+AGG 0.592466 2_1:+40353480 None:intergenic
ACTTCTTCCGAAAACGCCGC+CGG 0.596388 2_1:-40359350 Msa0207710:CDS
AATTTCTGTAGACATCGTTG+TGG 0.599319 2_1:-40354351 Msa0207710:intron
TCTTCCGAAAACGCCGCCGG+TGG 0.601011 2_1:-40359347 Msa0207710:CDS
CAAACACCACTTTAAAGACA+AGG 0.601109 2_1:-40359189 Msa0207710:intron
TTGATGTTATCATCTCTGAA+TGG 0.604535 2_1:-40358231 Msa0207710:CDS
TGCCACAGTGGCAGACATAG+AGG 0.605748 2_1:-40354263 Msa0207710:CDS
GTGTAGATTACTGTACACAC+TGG 0.606301 2_1:-40354023 Msa0207710:CDS
TCACCATCACTCACATGTGT+AGG 0.616419 2_1:+40353650 None:intergenic
GTAGTCGACTTCTTTGGGGA+CGG 0.618495 2_1:+40359310 None:intergenic
GGTTCTTACTCACTCAGCGG+TGG 0.619536 2_1:+40359379 None:intergenic
ACCGCTGGCTCAAACCAACA+GGG 0.622592 2_1:-40358153 Msa0207710:CDS
ACCAAAATGAATTCCATGTG+GGG 0.624971 2_1:+40356807 None:intergenic
TGTTGAAGCTACTAAGATGT+CGG 0.627273 2_1:-40359012 Msa0207710:CDS
TTCCTCTATGTCTGCCACTG+TGG 0.627982 2_1:+40354261 None:intergenic
CATGTGTAGGAGGATTTAAG+AGG 0.628125 2_1:+40353663 None:intergenic
ACAAAACTGTGTGGATATGG+AGG 0.629006 2_1:-40354199 Msa0207710:CDS
GGGAAACCATCGTTTAATGG+AGG 0.633476 2_1:-40353591 Msa0207710:CDS
GTCGACTTCTTTGGGGACGG+CGG 0.634616 2_1:+40359313 None:intergenic
GCTGAGTGAGTAAGAACCAT+GGG 0.636916 2_1:-40359374 Msa0207710:exon
TGTGTACAGTAATCTACACT+AGG 0.645957 2_1:+40354027 None:intergenic
GCAGTTCCTATGACTTGATG+TGG 0.646015 2_1:+40354316 None:intergenic
CGCTGAGTGAGTAAGAACCA+TGG 0.649117 2_1:-40359375 Msa0207710:exon
AAACCAAAATGAATTCCATG+TGG 0.649657 2_1:+40356805 None:intergenic
GTAATCTACACTAGGAGCGG+TGG 0.661333 2_1:+40354035 None:intergenic
TGGTGTTGATATGAGCACTT+TGG 0.661843 2_1:-40357022 Msa0207710:CDS
GTTATCATCTCTGAATGGAT+GGG 0.664829 2_1:-40358226 Msa0207710:CDS
GAGCTTCAAGCAGTATCCCA+CGG 0.678692 2_1:-40353468 Msa0207710:intron
GCTCAACCTCCATTAAACGA+TGG 0.680084 2_1:+40353585 None:intergenic
CCTCCTACACATGTGAGTGA+TGG 0.685198 2_1:-40353653 Msa0207710:CDS
CCGCTGGCTCAAACCAACAG+GGG 0.695198 2_1:-40358152 Msa0207710:CDS
CATGGTTCTTACTCACTCAG+CGG 0.701342 2_1:+40359376 None:intergenic
ACAGTAATCTACACTAGGAG+CGG 0.702438 2_1:+40354032 None:intergenic
GAACAATCCTAATCCCCACA+TGG 0.705500 2_1:-40356820 Msa0207710:CDS
ACAGAGAACACAAAACTGTG+TGG 0.712011 2_1:-40354208 Msa0207710:CDS
AACTGTGTGGATATGGAGGG+TGG 0.718749 2_1:-40354195 Msa0207710:CDS
CAAAACTGTGTGGATATGGA+GGG 0.725863 2_1:-40354198 Msa0207710:CDS
TGACTGTTTGACTGCCACAG+TGG 0.774647 2_1:-40354275 Msa0207710:CDS
GTAGATTACTGTACACACTG+GGG 0.847696 2_1:-40354021 Msa0207710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATGAATATTTCAAAA+AGG - chr2_1:40353409-40353428 Msa0207710:intron 10.0%
!!! TAAGAAAATATTATTTTTTC+GGG - chr2_1:40353582-40353601 Msa0207710:CDS 10.0%
!!! AGTTTTATCATTAAATAAAA+AGG + chr2_1:40355841-40355860 None:intergenic 10.0%
!!! ATTTATTGATTATTTAATTG+TGG - chr2_1:40359294-40359313 Msa0207710:CDS 10.0%
!!! TTTATTGATTATTTAATTGT+GGG - chr2_1:40359295-40359314 Msa0207710:CDS 10.0%
!! TAATGATAAGAAATTTGTAT+AGG - chr2_1:40353052-40353071 Msa0207710:three_prime_UTR 15.0%
!! TTATTAAGTGGTTAATTATA+GGG - chr2_1:40353495-40353514 Msa0207710:exon 15.0%
!! AACATTTAACAATTCATATA+AGG + chr2_1:40353849-40353868 None:intergenic 15.0%
!! TTATATGAATTGTTAAATGT+TGG - chr2_1:40353848-40353867 Msa0207710:intron 15.0%
!! TATACTATATATGAAAAATG+TGG - chr2_1:40354187-40354206 Msa0207710:CDS 15.0%
!!! AGAAAATAATTATTAGCTTA+TGG + chr2_1:40354547-40354566 None:intergenic 15.0%
!! TTACACATAATAAAAACTAA+AGG + chr2_1:40356068-40356087 None:intergenic 15.0%
!! AATATAATAACAACATAGAT+TGG - chr2_1:40357366-40357385 Msa0207710:intron 15.0%
!!! ATATAGTACTTATTTTTGAA+AGG + chr2_1:40358645-40358664 None:intergenic 15.0%
!!! TACTTATAGTTTAAGTTGTA+AGG - chr2_1:40353288-40353307 Msa0207710:intron 20.0%
!!! TAAGGTTTTGAATTAAATCT+CGG - chr2_1:40353306-40353325 Msa0207710:intron 20.0%
!! GTTATTAAGTGGTTAATTAT+AGG - chr2_1:40353494-40353513 Msa0207710:three_prime_UTR 20.0%
!! TTAACCACAAATTATCAATT+TGG + chr2_1:40353522-40353541 None:intergenic 20.0%
!!! TATTTTCTTATAATAGTGAC+CGG + chr2_1:40353572-40353591 None:intergenic 20.0%
!! TATTGAATAATTGATGTATC+TGG + chr2_1:40353641-40353660 None:intergenic 20.0%
!! ATTATTCAATAACCTGAAAA+AGG - chr2_1:40353650-40353669 Msa0207710:CDS 20.0%
!!! ATTTTTACATTGACTTAACA+TGG - chr2_1:40354792-40354811 Msa0207710:intron 20.0%
!!! GTTACATAGAATTTTTGTTA+TGG - chr2_1:40355250-40355269 Msa0207710:intron 20.0%
!!! TCAGTTTTACTATTCTAAAA+AGG + chr2_1:40355894-40355913 None:intergenic 20.0%
!!! ATAGGAAATGTTTTTGTTTT+AGG + chr2_1:40356381-40356400 None:intergenic 20.0%
!! AAACAAAAACATTTCCTATT+AGG - chr2_1:40356382-40356401 Msa0207710:intron 20.0%
!!! TTATATGATCTTCAACATTT+TGG + chr2_1:40356511-40356530 None:intergenic 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - chr2_1:40357259-40357278 Msa0207710:intron 20.0%
!! TTCATTAATGATACTTCAAT+GGG - chr2_1:40357649-40357668 Msa0207710:intron 20.0%
!! AGCAATTTGAATATTAATGA+AGG - chr2_1:40358240-40358259 Msa0207710:intron 20.0%
!!! TAGTGTAATGTTTTAATCAT+TGG - chr2_1:40358468-40358487 Msa0207710:intron 20.0%
!! TTAAAAAACATTCAAATGGA+AGG + chr2_1:40358791-40358810 None:intergenic 20.0%
!!! AAGACATTTTTTTAATACTG+AGG - chr2_1:40358842-40358861 Msa0207710:intron 20.0%
!!! AGACATTTTTTTAATACTGA+GGG - chr2_1:40358843-40358862 Msa0207710:intron 20.0%
!! AATATTACAATAGATAACTG+AGG - chr2_1:40358874-40358893 Msa0207710:intron 20.0%
!!! ATTGATTTTCTTTTTTGAAC+AGG - chr2_1:40358988-40359007 Msa0207710:CDS 20.0%
!!! TTTTATTTTGAGAAGGAAAT+AGG - chr2_1:40359443-40359462 Msa0207710:five_prime_UTR 20.0%
!!! TTTATTTTGAGAAGGAAATA+GGG - chr2_1:40359444-40359463 Msa0207710:five_prime_UTR 20.0%
! TTAGTATCCTTAACTTAACT+GGG - chr2_1:40352997-40353016 Msa0207710:three_prime_UTR 25.0%
!! GAAATTTGTATAGGTTGTTT+TGG - chr2_1:40353061-40353080 Msa0207710:three_prime_UTR 25.0%
! ATGGTATTTGACGAAATAAA+TGG + chr2_1:40353361-40353380 None:intergenic 25.0%
! CATTGAATAACTTATGTATC+TGG - chr2_1:40353607-40353626 Msa0207710:CDS 25.0%
!! TAAGCAAATATTCCTTTTTC+AGG + chr2_1:40353665-40353684 None:intergenic 25.0%
! AAGGAATATTTGCTTATACT+AGG - chr2_1:40353669-40353688 Msa0207710:CDS 25.0%
! AGGAATATTTGCTTATACTA+GGG - chr2_1:40353670-40353689 Msa0207710:CDS 25.0%
! ACTCTATTATATAGTCAAGA+TGG + chr2_1:40353697-40353716 None:intergenic 25.0%
! ATTACCTATTTGAGAGTTTA+GGG - chr2_1:40353746-40353765 Msa0207710:intron 25.0%
! ATATAAACACCAACACTTTA+AGG + chr2_1:40353903-40353922 None:intergenic 25.0%
!!! AAACCTCTTCTTTTGTTTAT+GGG + chr2_1:40354058-40354077 None:intergenic 25.0%
!!! AAAACCTCTTCTTTTGTTTA+TGG + chr2_1:40354059-40354078 None:intergenic 25.0%
!!! TCTTTAGTTTTCAATAGAAC+AGG - chr2_1:40354299-40354318 Msa0207710:CDS 25.0%
!!! CTTTAGTTTTCAATAGAACA+GGG - chr2_1:40354300-40354319 Msa0207710:CDS 25.0%
! TAATCAGTATTGTTAAGTAG+TGG - chr2_1:40354324-40354343 Msa0207710:CDS 25.0%
! TGTTGTTAATTGCAGAAATA+CGG + chr2_1:40354463-40354482 None:intergenic 25.0%
!!! GATTCAGATTTGTTAACATT+AGG + chr2_1:40354697-40354716 None:intergenic 25.0%
! ATTATCATGTAAAACTAGAG+AGG + chr2_1:40354740-40354759 None:intergenic 25.0%
! AAGTCAATGTAAAAATAGCA+TGG + chr2_1:40354788-40354807 None:intergenic 25.0%
!!! AATGATTTGGTAAACTATGA+AGG - chr2_1:40354875-40354894 Msa0207710:intron 25.0%
! TTTGTTAATGAGCAAATCTT+TGG - chr2_1:40354942-40354961 Msa0207710:intron 25.0%
!! ACCAGAAAATAGATAGTTTT+AGG - chr2_1:40355810-40355829 Msa0207710:intron 25.0%
!!! CCAGAAAATAGATAGTTTTA+GGG - chr2_1:40355811-40355830 Msa0207710:intron 25.0%
! AAATCCACTTACATATTGAA+AGG + chr2_1:40355956-40355975 None:intergenic 25.0%
!! GACTAGTTGAAATAAAATTG+AGG + chr2_1:40355986-40356005 None:intergenic 25.0%
! AAAAACTAAAGGAGATATGT+CGG + chr2_1:40356057-40356076 None:intergenic 25.0%
!!! AGTGGAAAAAAGAGTTTTAA+AGG + chr2_1:40356093-40356112 None:intergenic 25.0%
! TATATATATCGCCAATGAAT+TGG + chr2_1:40356299-40356318 None:intergenic 25.0%
! TAAAAAAATTCCCCTCATTT+GGG + chr2_1:40357460-40357479 None:intergenic 25.0%
! ATAAAAAAATTCCCCTCATT+TGG + chr2_1:40357461-40357480 None:intergenic 25.0%
!! GTTTTATGACTTTTATCTAC+AGG - chr2_1:40357620-40357639 Msa0207710:intron 25.0%
!! CATTGAAGTATCATTAATGA+AGG + chr2_1:40357650-40357669 None:intergenic 25.0%
! CTTCATTAATGATACTTCAA+TGG - chr2_1:40357648-40357667 Msa0207710:intron 25.0%
! TAATTTATGGAACTCATTGA+AGG + chr2_1:40358277-40358296 None:intergenic 25.0%
! AGAATAGAACAGCTAATTTA+TGG + chr2_1:40358290-40358309 None:intergenic 25.0%
! TCATACTTTCTGTGATAATT+TGG - chr2_1:40358364-40358383 Msa0207710:intron 25.0%
! ACATTGTCAGAATTGAAAAA+GGG + chr2_1:40358390-40358409 None:intergenic 25.0%
! TACATTGTCAGAATTGAAAA+AGG + chr2_1:40358391-40358410 None:intergenic 25.0%
! ATACAATTGAACTAGAATGA+AGG + chr2_1:40358440-40358459 None:intergenic 25.0%
!!! TAATGTTTTAATCATTGGAC+AGG - chr2_1:40358473-40358492 Msa0207710:intron 25.0%
! CCTGTTAAAAAACATTCAAA+TGG + chr2_1:40358795-40358814 None:intergenic 25.0%
!!! CCATTTGAATGTTTTTTAAC+AGG - chr2_1:40358792-40358811 Msa0207710:intron 25.0%
!!! ATTGTTAGGTTTTATAGTTG+AGG + chr2_1:40358901-40358920 None:intergenic 25.0%
!!! ATTTTCTTTTTTGAACAGGA+AGG - chr2_1:40358992-40359011 Msa0207710:CDS 25.0%
! AAGAAATAACTGTTGTACAA+TGG + chr2_1:40359345-40359364 None:intergenic 25.0%
!!! TGTACAACAGTTATTTCTTT+TGG - chr2_1:40359346-40359365 Msa0207710:CDS 25.0%
!!! TTATGTTTTTAGGTCAGGAT+TGG + chr2_1:40352753-40352772 None:intergenic 30.0%
!!! CAAGTTTATGTTTTTAGGTC+AGG + chr2_1:40352758-40352777 None:intergenic 30.0%
CTGACCTAAAAACATAAACT+TGG - chr2_1:40352756-40352775 Msa0207710:three_prime_UTR 30.0%
! GCAACCAAGTTTATGTTTTT+AGG + chr2_1:40352763-40352782 None:intergenic 30.0%
!! TTCTTTTTGGTGATAGAGAA+AGG + chr2_1:40352901-40352920 None:intergenic 30.0%
! TACTAACCTTGTCTTTAAAG+TGG + chr2_1:40352983-40353002 None:intergenic 30.0%
GTTAGTATCCTTAACTTAAC+TGG - chr2_1:40352996-40353015 Msa0207710:three_prime_UTR 30.0%
AACTTAATTGATACTTCCTC+CGG - chr2_1:40353550-40353569 Msa0207710:CDS 30.0%
GATTACCTATTTGAGAGTTT+AGG - chr2_1:40353745-40353764 Msa0207710:intron 30.0%
TAAACCCTAAACTCTCAAAT+AGG + chr2_1:40353753-40353772 None:intergenic 30.0%
! TATTTGAGAGTTTAGGGTTT+AGG - chr2_1:40353752-40353771 Msa0207710:intron 30.0%
TTGATGTTATCATCTCTGAA+TGG - chr2_1:40353932-40353951 Msa0207710:intron 30.0%
ACTGTAACACTGTTGTATTA+CGG - chr2_1:40354408-40354427 Msa0207710:intron 30.0%
ACTGACATGTATCAATGATT+TGG - chr2_1:40354862-40354881 Msa0207710:intron 30.0%
TCTGCTTCATGAAAATGAAA+TGG - chr2_1:40354900-40354919 Msa0207710:intron 30.0%
AACCAAAATGAATTCCATGT+GGG + chr2_1:40355360-40355379 None:intergenic 30.0%
AAACCAAAATGAATTCCATG+TGG + chr2_1:40355361-40355380 None:intergenic 30.0%
!!! ATTTTGGTTTGTTTGTCGTA+CGG - chr2_1:40355371-40355390 Msa0207710:intron 30.0%
ATGTTGATGTTCTTGTTCTT+GGG + chr2_1:40355433-40355452 None:intergenic 30.0%
! AATTAGGTTTTTCATGCAAG+TGG + chr2_1:40355472-40355491 None:intergenic 30.0%
! GAATGAAGTACTTCTGAATT+AGG + chr2_1:40355488-40355507 None:intergenic 30.0%
ACAATGAAAAGGCTATAAGA+CGG + chr2_1:40355537-40355556 None:intergenic 30.0%
GTTATAGCACTAATGCTTAA+GGG - chr2_1:40355685-40355704 Msa0207710:intron 30.0%
TCTGACCAAAAATACAATAG+CGG + chr2_1:40355775-40355794 None:intergenic 30.0%
! CCCTAAAACTATCTATTTTC+TGG + chr2_1:40355814-40355833 None:intergenic 30.0%
CAAAAACATTTCCTATTAGG+TGG - chr2_1:40356385-40356404 Msa0207710:intron 30.0%
TTCAATAACAGCAAAAGTCT+AGG - chr2_1:40356593-40356612 Msa0207710:intron 30.0%
!!! AACTGCTTTTTTTCGGTTTT+TGG + chr2_1:40356837-40356856 None:intergenic 30.0%
!!! TGTTCTCAACTGCTTTTTTT+CGG + chr2_1:40356844-40356863 None:intergenic 30.0%
GAACTCAAAAATTGTATTGG+GGG + chr2_1:40357436-40357455 None:intergenic 30.0%
GGAACTCAAAAATTGTATTG+GGG + chr2_1:40357437-40357456 None:intergenic 30.0%
GGGAACTCAAAAATTGTATT+GGG + chr2_1:40357438-40357457 None:intergenic 30.0%
AAAAAAATTCCCCTCATTTG+GGG + chr2_1:40357459-40357478 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + chr2_1:40357519-40357538 None:intergenic 30.0%
AACTACAAATCACACCATTA+AGG + chr2_1:40357603-40357622 None:intergenic 30.0%
TGAAATCATCAAGAGAAAGT+TGG + chr2_1:40357738-40357757 None:intergenic 30.0%
AATATTAATGAAGGAGCTGA+TGG - chr2_1:40358249-40358268 Msa0207710:intron 30.0%
AAACATTCAAATGGAAGGAT+AGG + chr2_1:40358786-40358805 None:intergenic 30.0%
!! TGTAGAAGTGCTTAATTGTT+AGG + chr2_1:40358915-40358934 None:intergenic 30.0%
TTCAATCTTATCGAACTGTA+CGG - chr2_1:40359029-40359048 Msa0207710:CDS 30.0%
!!! TGGGTTGTCTGATTTTTTTT+TGG - chr2_1:40359314-40359333 Msa0207710:CDS 30.0%
AATAACTGTTGTACAATGGA+AGG + chr2_1:40359341-40359360 None:intergenic 30.0%
AATCCTACAATAAGGTTTCA+GGG + chr2_1:40359375-40359394 None:intergenic 30.0%
TAATCCTACAATAAGGTTTC+AGG + chr2_1:40359376-40359395 None:intergenic 30.0%
TCTACTCTAATCCTACAATA+AGG + chr2_1:40359383-40359402 None:intergenic 30.0%
!!! TTTTTAGGTCAGGATTGGTT+TGG + chr2_1:40352748-40352767 None:intergenic 35.0%
!!! GATCTGAGAGCATTTCTTTT+TGG + chr2_1:40352914-40352933 None:intergenic 35.0%
! CAAACACCACTTTAAAGACA+AGG - chr2_1:40352974-40352993 Msa0207710:three_prime_UTR 35.0%
ATCCTTAACTTAACTGGGTT+TGG - chr2_1:40353002-40353021 Msa0207710:three_prime_UTR 35.0%
TCCTTAACTTAACTGGGTTT+GGG - chr2_1:40353003-40353022 Msa0207710:three_prime_UTR 35.0%
!!! GTATAGGTTGTTTTGGATGT+TGG - chr2_1:40353068-40353087 Msa0207710:three_prime_UTR 35.0%
TGTTGAAGCTACTAAGATGT+CGG - chr2_1:40353151-40353170 Msa0207710:three_prime_UTR 35.0%
GAAATCGAATAATCTTGAGC+AGG - chr2_1:40353193-40353212 Msa0207710:intron 35.0%
CATACAAACAAACCTTTCTC+AGG + chr2_1:40353260-40353279 None:intergenic 35.0%
TTTCGTCAAATACCATGACT+AGG - chr2_1:40353365-40353384 Msa0207710:intron 35.0%
!! ATTTGATAGTGTCCTAGTCA+TGG + chr2_1:40353380-40353399 None:intergenic 35.0%
! GGGACTAGATTGTTATTAAG+TGG - chr2_1:40353483-40353502 Msa0207710:three_prime_UTR 35.0%
! GGGTCCAAATTGATAATTTG+TGG - chr2_1:40353515-40353534 Msa0207710:CDS 35.0%
TTTCTTATAATAGTGACCGG+AGG + chr2_1:40353569-40353588 None:intergenic 35.0%
!! TTTAGGGTTTAGGACTAGTT+TGG - chr2_1:40353762-40353781 Msa0207710:intron 35.0%
TGTTATCATCTCTGAATGGA+TGG - chr2_1:40353936-40353955 Msa0207710:intron 35.0%
GTTATCATCTCTGAATGGAT+GGG - chr2_1:40353937-40353956 Msa0207710:intron 35.0%
CTTCCCATAAACAAAAGAAG+AGG - chr2_1:40354052-40354071 Msa0207710:CDS 35.0%
GTAATACAACAGTGTTACAG+TGG + chr2_1:40354409-40354428 None:intergenic 35.0%
ATACGGATAGCAGAAAAAAG+CGG + chr2_1:40354446-40354465 None:intergenic 35.0%
TTCTGCAATTAACAACACTG+AGG - chr2_1:40354466-40354485 Msa0207710:intron 35.0%
CTGAGAAAACAAGAAACAAG+TGG - chr2_1:40354612-40354631 Msa0207710:intron 35.0%
!!! AGTGGCTCTATTTTAGTGAA+GGG + chr2_1:40354664-40354683 None:intergenic 35.0%
!! GGTTTTGTGTTATGAAGGAA+TGG + chr2_1:40354719-40354738 None:intergenic 35.0%
!! AGAGAGGTTTTGTGTTATGA+AGG + chr2_1:40354724-40354743 None:intergenic 35.0%
! AGCATGGTAATGTGCAAATT+GGG + chr2_1:40354772-40354791 None:intergenic 35.0%
! TAGCATGGTAATGTGCAAAT+TGG + chr2_1:40354773-40354792 None:intergenic 35.0%
ATACATGTCAGTATCTCTGT+TGG + chr2_1:40354854-40354873 None:intergenic 35.0%
GTTAATGAGCAAATCTTTGG+TGG - chr2_1:40354945-40354964 Msa0207710:intron 35.0%
TGGGATAGTAGAACAAAAGT+TGG - chr2_1:40355057-40355076 Msa0207710:intron 35.0%
GGGATAGTAGAACAAAAGTT+GGG - chr2_1:40355058-40355077 Msa0207710:intron 35.0%
GATGAAACAAAAGCCTTCTA+TGG - chr2_1:40355121-40355140 Msa0207710:intron 35.0%
ACCAAAATGAATTCCATGTG+GGG + chr2_1:40355359-40355378 None:intergenic 35.0%
! CACTTTTATACACTACAGCA+TGG + chr2_1:40355398-40355417 None:intergenic 35.0%
CATGTTGATGTTCTTGTTCT+TGG + chr2_1:40355434-40355453 None:intergenic 35.0%
ACAAGAACATCAACATGTGT+TGG - chr2_1:40355437-40355456 Msa0207710:intron 35.0%
TCTGAACTTGGTTTATGAGT+GGG + chr2_1:40355512-40355531 None:intergenic 35.0%
TTCTGAACTTGGTTTATGAG+TGG + chr2_1:40355513-40355532 None:intergenic 35.0%
TATAAGACGGTTTCTGAACT+TGG + chr2_1:40355524-40355543 None:intergenic 35.0%
TTCACTCTTGCACAATGAAA+AGG + chr2_1:40355548-40355567 None:intergenic 35.0%
TCATGATTGCATGGAAGAAA+GGG + chr2_1:40355588-40355607 None:intergenic 35.0%
TTCATGATTGCATGGAAGAA+AGG + chr2_1:40355589-40355608 None:intergenic 35.0%
CAATAATGCAACTGTGTAAG+TGG - chr2_1:40355625-40355644 Msa0207710:intron 35.0%
CGTTATAGCACTAATGCTTA+AGG - chr2_1:40355684-40355703 Msa0207710:intron 35.0%
GTGGAACAAGGATAGAAATT+AGG + chr2_1:40355735-40355754 None:intergenic 35.0%
!!! GCTATTGTATTTTTGGTCAG+AGG - chr2_1:40355774-40355793 Msa0207710:intron 35.0%
GCAACCTTTCAATATGTAAG+TGG - chr2_1:40355949-40355968 Msa0207710:intron 35.0%
TGTCTATTTCGCCAATGAAT+TGG + chr2_1:40356263-40356282 None:intergenic 35.0%
CGAAATAGACAACGTTCTAT+AGG - chr2_1:40356272-40356291 Msa0207710:intron 35.0%
GTTCTATAGGTCCAATTCAT+TGG - chr2_1:40356285-40356304 Msa0207710:intron 35.0%
AACCTCAAAAATGCTTTAGC+AGG - chr2_1:40356429-40356448 Msa0207710:intron 35.0%
AACCAAAAATCTGAGCAACA+GGG - chr2_1:40356764-40356783 Msa0207710:intron 35.0%
TTGAGTAGAAGAAAAAGCTG+TGG + chr2_1:40356807-40356826 None:intergenic 35.0%
CTGTTTCCATATCAAGATAG+AGG - chr2_1:40357042-40357061 Msa0207710:CDS 35.0%
TTGCAACCTCTATCTTGATA+TGG + chr2_1:40357051-40357070 None:intergenic 35.0%
TATCAAGATAGAGGTTGCAA+TGG - chr2_1:40357051-40357070 Msa0207710:CDS 35.0%
!! ATCTCACTTTAGGCTTTGTT+TGG - chr2_1:40357200-40357219 Msa0207710:intron 35.0%
!! TCTCACTTTAGGCTTTGTTT+GGG - chr2_1:40357201-40357220 Msa0207710:intron 35.0%
TCAAAAATTGTATTGGGGGA+GGG + chr2_1:40357432-40357451 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG + chr2_1:40357439-40357458 None:intergenic 35.0%
AAAAAATTCCCCTCATTTGG+GGG + chr2_1:40357458-40357477 None:intergenic 35.0%
AAGAAATAGAAGACATTGGG+AGG + chr2_1:40357516-40357535 None:intergenic 35.0%
GTGGAAGAAATAGAAGACAT+TGG + chr2_1:40357520-40357539 None:intergenic 35.0%
!! ACACCATTAAGGCTTTGTTT+GGG + chr2_1:40357592-40357611 None:intergenic 35.0%
AATTTCTGTAGACATCGTTG+TGG - chr2_1:40357812-40357831 Msa0207710:intron 35.0%
AACACAAAACTGTGTGGATA+TGG - chr2_1:40357961-40357980 Msa0207710:intron 35.0%
TTTCCTGTTTATGCTTACCA+GGG - chr2_1:40358067-40358086 Msa0207710:intron 35.0%
TGTGTACAGTAATCTACACT+AGG + chr2_1:40358139-40358158 None:intergenic 35.0%
TGTAGATTACTGTACACACT+GGG - chr2_1:40358141-40358160 Msa0207710:intron 35.0%
! CTCTCATCTATAAAGGTACA+AGG + chr2_1:40358328-40358347 None:intergenic 35.0%
TACCTTTATAGATGAGAGAC+AGG - chr2_1:40358330-40358349 Msa0207710:intron 35.0%
ACCTTTATAGATGAGAGACA+GGG - chr2_1:40358331-40358350 Msa0207710:intron 35.0%
!! CTGTGAGATTCAAAAGCATT+CGG - chr2_1:40358605-40358624 Msa0207710:intron 35.0%
!! TGTGAGATTCAAAAGCATTC+GGG - chr2_1:40358606-40358625 Msa0207710:intron 35.0%
AGTTTAGATTCCTTTGTTCG+CGG - chr2_1:40358673-40358692 Msa0207710:intron 35.0%
ATCGAACTGTACGGTTATTA+AGG - chr2_1:40359038-40359057 Msa0207710:CDS 35.0%
TCGAACTGTACGGTTATTAA+GGG - chr2_1:40359039-40359058 Msa0207710:CDS 35.0%
TGTTTACAGAAGAAAGCAGT+TGG - chr2_1:40359079-40359098 Msa0207710:CDS 35.0%
!!! TTGGCGTTGCTTTTAATACT+TGG - chr2_1:40359098-40359117 Msa0207710:intron 35.0%
GTCACACAAAACCAAATGAT+CGG + chr2_1:40359129-40359148 None:intergenic 35.0%
TGTTCAGCATTATTCAGTGA+TGG - chr2_1:40359169-40359188 Msa0207710:intron 35.0%
TACAAGCTTTGCTTGAAAGT+CGG + chr2_1:40359224-40359243 None:intergenic 35.0%
TTAAAGAGGATAGTAGGGTA+GGG + chr2_1:40359414-40359433 None:intergenic 35.0%
TACCCTACTATCCTCTTTAA+CGG - chr2_1:40359414-40359433 Msa0207710:five_prime_UTR 35.0%
!!! GTGCAGGTTTTATTTTGAGA+AGG - chr2_1:40359436-40359455 Msa0207710:five_prime_UTR 35.0%
! TTAGCGTAGTCGACTTCTTT+GGG + chr2_1:40352861-40352880 None:intergenic 40.0%
! ATTAGCGTAGTCGACTTCTT+TGG + chr2_1:40352862-40352881 None:intergenic 40.0%
! TTGGTGATAGAGAAAGGAGT+AGG + chr2_1:40352895-40352914 None:intergenic 40.0%
ACCCAAACCCAGTTAAGTTA+AGG + chr2_1:40353007-40353026 None:intergenic 40.0%
! AACTTAACTGGGTTTGGGTT+TGG - chr2_1:40353008-40353027 Msa0207710:three_prime_UTR 40.0%
! ACTTAACTGGGTTTGGGTTT+GGG - chr2_1:40353009-40353028 Msa0207710:three_prime_UTR 40.0%
! GAAGTGGGATTCTTGCTATA+TGG - chr2_1:40353096-40353115 Msa0207710:three_prime_UTR 40.0%
TAATCTTGAGCAGGTTGTTG+AGG - chr2_1:40353202-40353221 Msa0207710:intron 40.0%
CAGGTTGTTGAGGTTATTGA+GGG - chr2_1:40353212-40353231 Msa0207710:intron 40.0%
GATGTTACATTGCCTGAGAA+AGG - chr2_1:40353245-40353264 Msa0207710:intron 40.0%
AGTTTATCCGATAGTCTGTG+AGG - chr2_1:40353462-40353481 Msa0207710:intron 40.0%
GTTTATCCGATAGTCTGTGA+GGG - chr2_1:40353463-40353482 Msa0207710:intron 40.0%
TACGCAAAACCTTGATGTTG+CGG - chr2_1:40353790-40353809 Msa0207710:intron 40.0%
GGCAATCACAGAATACACAA+AGG + chr2_1:40353882-40353901 None:intergenic 40.0%
CTGTGATTGCCTTAAAGTGT+TGG - chr2_1:40353891-40353910 Msa0207710:intron 40.0%
AATACTTACATCACCCCTGT+TGG + chr2_1:40354027-40354046 None:intergenic 40.0%
AAAAGCTGCACATAAAGCAG+AGG - chr2_1:40354272-40354291 Msa0207710:CDS 40.0%
GATAGAAAACTCTCCTCCAA+GGG - chr2_1:40354634-40354653 Msa0207710:intron 40.0%
!!! CAGTGGCTCTATTTTAGTGA+AGG + chr2_1:40354665-40354684 None:intergenic 40.0%
ACATTAGGTGAATAGAGCAG+TGG + chr2_1:40354682-40354701 None:intergenic 40.0%
ATGTGCAAATTGGGGTAGTT+AGG + chr2_1:40354763-40354782 None:intergenic 40.0%
! GCATGGTAATGTGCAAATTG+GGG + chr2_1:40354771-40354790 None:intergenic 40.0%
GTAATGTGCTGGAAATAGCA+TGG + chr2_1:40354832-40354851 None:intergenic 40.0%
!! TATCTCTGTTGGTAATGTGC+TGG + chr2_1:40354843-40354862 None:intergenic 40.0%
! AGCAAATCTTTGGTGGCTTT+CGG - chr2_1:40354952-40354971 Msa0207710:intron 40.0%
TCTACTATCCCAGTCCTAAT+GGG + chr2_1:40355049-40355068 None:intergenic 40.0%
TTCTACTATCCCAGTCCTAA+TGG + chr2_1:40355050-40355069 None:intergenic 40.0%
GCTCATATCAACACCATAGA+AGG + chr2_1:40355137-40355156 None:intergenic 40.0%
!! TGGTGTTGATATGAGCACTT+TGG - chr2_1:40355141-40355160 Msa0207710:intron 40.0%
GCAGAGGAAATACTATCTAC+AGG - chr2_1:40355183-40355202 Msa0207710:intron 40.0%
ACAAGCCAGCACATAATGTA+GGG + chr2_1:40355291-40355310 None:intergenic 40.0%
TACAAGCCAGCACATAATGT+AGG + chr2_1:40355292-40355311 None:intergenic 40.0%
ATGAATTCCATGTGGGGATT+AGG + chr2_1:40355353-40355372 None:intergenic 40.0%
! TCCCCACATGGAATTCATTT+TGG - chr2_1:40355355-40355374 Msa0207710:intron 40.0%
AGAACATCAACATGTGTTGG+TGG - chr2_1:40355440-40355459 Msa0207710:intron 40.0%
! GAACATCAACATGTGTTGGT+GGG - chr2_1:40355441-40355460 Msa0207710:intron 40.0%
! AGAAAGGGCTTTTGGATCAA+GGG + chr2_1:40355573-40355592 None:intergenic 40.0%
! AAGAAAGGGCTTTTGGATCA+AGG + chr2_1:40355574-40355593 None:intergenic 40.0%
CAGCAAAGTTCATGATTGCA+TGG + chr2_1:40355597-40355616 None:intergenic 40.0%
TGCAATCATGAACTTTGCTG+TGG - chr2_1:40355597-40355616 Msa0207710:intron 40.0%
TCTATCCTTGTTCCACTGTA+AGG - chr2_1:40355739-40355758 Msa0207710:intron 40.0%
CTATCCTTGTTCCACTGTAA+GGG - chr2_1:40355740-40355759 Msa0207710:intron 40.0%
! AGCAGCCGCTATTGTATTTT+TGG - chr2_1:40355767-40355786 Msa0207710:intron 40.0%
ATTTGACAACACTGTTCTGC+AGG - chr2_1:40356236-40356255 Msa0207710:intron 40.0%
TACAACAGACTCCACCTAAT+AGG + chr2_1:40356399-40356418 None:intergenic 40.0%
ATTAGGTGGAGTCTGTTGTA+TGG - chr2_1:40356399-40356418 Msa0207710:intron 40.0%
!! GTCCTGCTAAAGCATTTTTG+AGG + chr2_1:40356434-40356453 None:intergenic 40.0%
CAATACACTATTCGCAACCA+TGG + chr2_1:40356654-40356673 None:intergenic 40.0%
GAACCAAAAATCTGAGCAAC+AGG - chr2_1:40356763-40356782 Msa0207710:intron 40.0%
! GTGATTTGTCATAGAGCAGT+TGG - chr2_1:40356966-40356985 Msa0207710:intron 40.0%
GCACTATAGCTCATGTTCAA+TGG + chr2_1:40357007-40357026 None:intergenic 40.0%
CCAAAAGTAGAGGCAATTCA+CGG + chr2_1:40357077-40357096 None:intergenic 40.0%
GCATTTGTCACCAAAAGTAG+AGG + chr2_1:40357087-40357106 None:intergenic 40.0%
!! ACACAGCAGAATTGCTTTTG+CGG + chr2_1:40357164-40357183 None:intergenic 40.0%
GCAATTCTGCTGTGTGTTAT+TGG - chr2_1:40357169-40357188 Msa0207710:intron 40.0%
GGTGACTATGATCTCACTTT+AGG - chr2_1:40357190-40357209 Msa0207710:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr2_1:40357208-40357227 Msa0207710:intron 40.0%
CTCAAAAATTGTATTGGGGG+AGG + chr2_1:40357433-40357452 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - chr2_1:40357445-40357464 Msa0207710:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - chr2_1:40357446-40357465 Msa0207710:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + chr2_1:40357548-40357567 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr2_1:40357585-40357604 None:intergenic 40.0%
ACTCCCAAACAAAGCCTTAA+TGG - chr2_1:40357586-40357605 Msa0207710:intron 40.0%
!! CACACCATTAAGGCTTTGTT+TGG + chr2_1:40357593-40357612 None:intergenic 40.0%
AGTCTCCTCTGATGAGATTT+GGG + chr2_1:40357692-40357711 None:intergenic 40.0%
CTTCATCCACATCAAGTCAT+AGG - chr2_1:40357841-40357860 Msa0207710:intron 40.0%
!! ACACAGTTTTGTGTTCTCTG+TGG + chr2_1:40357956-40357975 None:intergenic 40.0%
ACAGAGAACACAAAACTGTG+TGG - chr2_1:40357955-40357974 Msa0207710:intron 40.0%
ACAAAACTGTGTGGATATGG+AGG - chr2_1:40357964-40357983 Msa0207710:intron 40.0%
CAAAACTGTGTGGATATGGA+GGG - chr2_1:40357965-40357984 Msa0207710:intron 40.0%
GGTGGTTTGATGTACATTTC+CGG - chr2_1:40357986-40358005 Msa0207710:intron 40.0%
GTGGTTTGATGTACATTTCC+GGG - chr2_1:40357987-40358006 Msa0207710:intron 40.0%
ATAGCTATAATGCCCATGCA+AGG + chr2_1:40358026-40358045 None:intergenic 40.0%
GTTTCCTGTTTATGCTTACC+AGG - chr2_1:40358066-40358085 Msa0207710:intron 40.0%
AACTCAATCTCATGTTCAGC+TGG + chr2_1:40358106-40358125 None:intergenic 40.0%
ACAGTAATCTACACTAGGAG+CGG + chr2_1:40358134-40358153 None:intergenic 40.0%
GTGTAGATTACTGTACACAC+TGG - chr2_1:40358140-40358159 Msa0207710:intron 40.0%
GTAGATTACTGTACACACTG+GGG - chr2_1:40358142-40358161 Msa0207710:intron 40.0%
ACCCTGTCTCTCATCTATAA+AGG + chr2_1:40358335-40358354 None:intergenic 40.0%
GAATGAAGGTCACAGGTTAT+AGG + chr2_1:40358426-40358445 None:intergenic 40.0%
TGAACTAGAATGAAGGTCAC+AGG + chr2_1:40358433-40358452 None:intergenic 40.0%
CATGTGTAGGAGGATTTAAG+AGG + chr2_1:40358503-40358522 None:intergenic 40.0%
! TTTTCTAATGAGTCGCTCGA+AGG - chr2_1:40358551-40358570 Msa0207710:intron 40.0%
TTTCTAATGAGTCGCTCGAA+GGG - chr2_1:40358552-40358571 Msa0207710:intron 40.0%
GAAGGGAAACCATCGTTTAA+TGG - chr2_1:40358569-40358588 Msa0207710:intron 40.0%
! TAGAGTTTAGAGCATACCGT+GGG + chr2_1:40358714-40358733 None:intergenic 40.0%
! ATAGAGTTTAGAGCATACCG+TGG + chr2_1:40358715-40358734 None:intergenic 40.0%
! ACTTGGTTCTTCCGATCATT+TGG - chr2_1:40359115-40359134 Msa0207710:intron 40.0%
TGTGTGACATGTGACTCATA+AGG - chr2_1:40359141-40359160 Msa0207710:intron 40.0%
GTGTGACATGTGACTCATAA+GGG - chr2_1:40359142-40359161 Msa0207710:intron 40.0%
CAGCATTATTCAGTGATGGT+TGG - chr2_1:40359173-40359192 Msa0207710:intron 40.0%
TGGTTGGATAAACCTCGTAT+TGG - chr2_1:40359189-40359208 Msa0207710:intron 40.0%
ACAAGCTTTGCTTGAAAGTC+GGG + chr2_1:40359223-40359242 None:intergenic 40.0%
CAACCCTGAAACCTTATTGT+AGG - chr2_1:40359369-40359388 Msa0207710:exon 40.0%
GTTAAAGAGGATAGTAGGGT+AGG + chr2_1:40359415-40359434 None:intergenic 40.0%
CACCGTTAAAGAGGATAGTA+GGG + chr2_1:40359419-40359438 None:intergenic 40.0%
TAAAACCTGCACCGTTAAAG+AGG + chr2_1:40359428-40359447 None:intergenic 40.0%
!! TTAGGTCAGGATTGGTTTGG+CGG + chr2_1:40352745-40352764 None:intergenic 45.0%
CATGGTTCTTACTCACTCAG+CGG + chr2_1:40352790-40352809 None:intergenic 45.0%
GCTGAGTGAGTAAGAACCAT+GGG - chr2_1:40352789-40352808 Msa0207710:three_prime_UTR 45.0%
! TAGCGTAGTCGACTTCTTTG+GGG + chr2_1:40352860-40352879 None:intergenic 45.0%
!!! GTTGTTTTGGATGTTGGTGC+TGG - chr2_1:40353074-40353093 Msa0207710:three_prime_UTR 45.0%
GCAGGTTGTTGAGGTTATTG+AGG - chr2_1:40353211-40353230 Msa0207710:intron 45.0%
GGTTATTGAGGGTTCTGTTG+AGG - chr2_1:40353223-40353242 Msa0207710:intron 45.0%
TCTAGTCCCTCACAGACTAT+CGG + chr2_1:40353472-40353491 None:intergenic 45.0%
CAATTGTTGCCGCAACATCA+AGG + chr2_1:40353802-40353821 None:intergenic 45.0%
GGATAGAAAACTCTCCTCCA+AGG - chr2_1:40354633-40354652 Msa0207710:intron 45.0%
TTTAGTGAAGGGCAAACCCT+TGG + chr2_1:40354653-40354672 None:intergenic 45.0%
! TTTGGCAAAGCCTTTTGCTG+AGG - chr2_1:40355159-40355178 Msa0207710:intron 45.0%
GAACAATCCTAATCCCCACA+TGG - chr2_1:40355343-40355362 Msa0207710:intron 45.0%
! GAAAGGGCTTTTGGATCAAG+GGG + chr2_1:40355572-40355591 None:intergenic 45.0%
! TGCATGGAAGAAAGGGCTTT+TGG + chr2_1:40355581-40355600 None:intergenic 45.0%
TGCAACTGTGTAAGTGGCTT+TGG - chr2_1:40355631-40355650 Msa0207710:intron 45.0%
!! TCAAGAGCGCTGTCAAATTG+AGG - chr2_1:40355661-40355680 Msa0207710:intron 45.0%
ATGTCCCTTACAGTGGAACA+AGG + chr2_1:40355747-40355766 None:intergenic 45.0%
TCATGTTGAAGTTGGGATGG+AGG + chr2_1:40356011-40356030 None:intergenic 45.0%
AGGTCATGTTGAAGTTGGGA+TGG + chr2_1:40356014-40356033 None:intergenic 45.0%
GAGGAGGTCATGTTGAAGTT+GGG + chr2_1:40356018-40356037 None:intergenic 45.0%
! CTACATCTGCTTGCTGAAAC+TGG - chr2_1:40356120-40356139 Msa0207710:intron 45.0%
CTTCGCTATTGGGGAAATTG+TGG + chr2_1:40356154-40356173 None:intergenic 45.0%
ATTTCCCCAATAGCGAAGCT+TGG - chr2_1:40356156-40356175 Msa0207710:intron 45.0%
CTATCCAAGCTTCGCTATTG+GGG + chr2_1:40356163-40356182 None:intergenic 45.0%
GCTATCCAAGCTTCGCTATT+GGG + chr2_1:40356164-40356183 None:intergenic 45.0%
TGCTATCCAAGCTTCGCTAT+TGG + chr2_1:40356165-40356184 None:intergenic 45.0%
GTTCTGCAGGTCCAATTCAT+TGG - chr2_1:40356249-40356268 Msa0207710:intron 45.0%
TAAAAGTTGAAGCCTGCGTG+CGG - chr2_1:40356618-40356637 Msa0207710:intron 45.0%
GCATGCTGTTCTAATCTTCG+CGG + chr2_1:40356739-40356758 None:intergenic 45.0%
! TGCCCTGTTGCTCAGATTTT+TGG + chr2_1:40356769-40356788 None:intergenic 45.0%
AAAAATCTGAGCAACAGGGC+AGG - chr2_1:40356768-40356787 Msa0207710:intron 45.0%
AAAATCTGAGCAACAGGGCA+GGG - chr2_1:40356769-40356788 Msa0207710:intron 45.0%
! CCGTGAATTGCCTCTACTTT+TGG - chr2_1:40357074-40357093 Msa0207710:CDS 45.0%
AGCTGTTTACATCGATGTGC+TGG - chr2_1:40357120-40357139 Msa0207710:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr2_1:40357212-40357231 Msa0207710:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr2_1:40357213-40357232 Msa0207710:intron 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG - chr2_1:40357447-40357466 Msa0207710:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG + chr2_1:40357510-40357529 None:intergenic 45.0%
ATAGAAGACATTGGGAGGAG+AGG + chr2_1:40357511-40357530 None:intergenic 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr2_1:40357539-40357558 None:intergenic 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + chr2_1:40357552-40357571 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr2_1:40357213-40357232 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr2_1:40357212-40357231 None:intergenic 45.0%
CTCTGATGAGATTTGGGCAT+GGG + chr2_1:40357686-40357705 None:intergenic 45.0%
CAGTCTCCTCTGATGAGATT+TGG + chr2_1:40357693-40357712 None:intergenic 45.0%
GCAGTTCCTATGACTTGATG+TGG + chr2_1:40357850-40357869 None:intergenic 45.0%
CATCAAGTCATAGGAACTGC+TGG - chr2_1:40357850-40357869 Msa0207710:intron 45.0%
! AGGAACTGCTGGTCTAGTAA+AGG - chr2_1:40357861-40357880 Msa0207710:intron 45.0%
TAAGATGCTCTGACCTTGCA+TGG - chr2_1:40358010-40358029 Msa0207710:intron 45.0%
AAGATGCTCTGACCTTGCAT+GGG - chr2_1:40358011-40358030 Msa0207710:intron 45.0%
TCACCATCACTCACATGTGT+AGG + chr2_1:40358516-40358535 None:intergenic 45.0%
GGGAAACCATCGTTTAATGG+AGG - chr2_1:40358572-40358591 Msa0207710:intron 45.0%
GCTCAACCTCCATTAAACGA+TGG + chr2_1:40358581-40358600 None:intergenic 45.0%
CGTTTAATGGAGGTTGAGCT+TGG - chr2_1:40358582-40358601 Msa0207710:intron 45.0%
!! CGGGAAAAAGTACCAATACG+AGG + chr2_1:40359204-40359223 None:intergenic 45.0%
GCACCGTTAAAGAGGATAGT+AGG + chr2_1:40359420-40359439 None:intergenic 45.0%
ACTATCCTCTTTAACGGTGC+AGG - chr2_1:40359420-40359439 Msa0207710:five_prime_UTR 45.0%
!!! ATAAGAAAATATTATTTTTT+CGG - chr2_1:40353581-40353600 Msa0207710:CDS 5.0%
!!! TTTAAAAATATTTATTTTGT+AGG - chr2_1:40354993-40355012 Msa0207710:intron 5.0%
!! AAATTAAAATATGTATAAAT+TGG + chr2_1:40357797-40357816 None:intergenic 5.0%
!! TTGGTTTGGCGGTAGGGTTT+AGG + chr2_1:40352734-40352753 None:intergenic 50.0%
!! TCAGGATTGGTTTGGCGGTA+GGG + chr2_1:40352740-40352759 None:intergenic 50.0%
CGCTGAGTGAGTAAGAACCA+TGG - chr2_1:40352788-40352807 Msa0207710:three_prime_UTR 50.0%
!!! GTTTTCGGAAGAAGTGCCCA+TGG + chr2_1:40352808-40352827 None:intergenic 50.0%
! GTAGTCGACTTCTTTGGGGA+CGG + chr2_1:40352856-40352875 None:intergenic 50.0%
GCTCTCAGATCGTGTTCGTA+TGG - chr2_1:40352923-40352942 Msa0207710:three_prime_UTR 50.0%
!! TTGGATGTTGGTGCTGGAAG+TGG - chr2_1:40353080-40353099 Msa0207710:three_prime_UTR 50.0%
!! TGGATGTTGGTGCTGGAAGT+GGG - chr2_1:40353081-40353100 Msa0207710:three_prime_UTR 50.0%
GCTATATGGTCAGCTCAAGC+AGG - chr2_1:40353110-40353129 Msa0207710:three_prime_UTR 50.0%
AGCTCAAGCAGGTGCAAAGA+AGG - chr2_1:40353121-40353140 Msa0207710:three_prime_UTR 50.0%
ATCCTAGTCATGCTCGCATG+TGG - chr2_1:40355017-40355036 Msa0207710:intron 50.0%
ATCCACATGCGAGCATGACT+AGG + chr2_1:40355022-40355041 None:intergenic 50.0%
TAGTCATGCTCGCATGTGGA+TGG - chr2_1:40355021-40355040 Msa0207710:intron 50.0%
GGCGATTACCAGTCAGCTAT+GGG - chr2_1:40355079-40355098 Msa0207710:intron 50.0%
TTCCTCTGCTCCTCAGCAAA+AGG + chr2_1:40355172-40355191 None:intergenic 50.0%
GTCAGCCCTACATTATGTGC+TGG - chr2_1:40355283-40355302 Msa0207710:intron 50.0%
! TCAACATGTGTTGGTGGGTC+AGG - chr2_1:40355446-40355465 Msa0207710:intron 50.0%
TGTTGAAGTTGGGATGGAGG+AGG + chr2_1:40356008-40356027 None:intergenic 50.0%
GGAGGAGGTCATGTTGAAGT+TGG + chr2_1:40356019-40356038 None:intergenic 50.0%
AGACTCACTGGAAATGGAGG+AGG + chr2_1:40356034-40356053 None:intergenic 50.0%
TGTCGGAGACTCACTGGAAA+TGG + chr2_1:40356040-40356059 None:intergenic 50.0%
GAGATATGTCGGAGACTCAC+TGG + chr2_1:40356046-40356065 None:intergenic 50.0%
AGCAGATGTAGCAGCAACAG+TGG + chr2_1:40356111-40356130 None:intergenic 50.0%
GCGAAGCTTGGATAGCATTG+TGG - chr2_1:40356168-40356187 Msa0207710:intron 50.0%
AAATCTGAGCAACAGGGCAG+GGG - chr2_1:40356770-40356789 Msa0207710:intron 50.0%
GTGCAATGCAAGCAAGCAGT+AGG - chr2_1:40356938-40356957 Msa0207710:intron 50.0%
TGCAAGCAAGCAGTAGGTGT+AGG - chr2_1:40356944-40356963 Msa0207710:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr2_1:40357211-40357230 Msa0207710:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr2_1:40357218-40357237 Msa0207710:intron 50.0%
!!! GGGTTTTGAGGGGTTATGGA+GGG + chr2_1:40357412-40357431 None:intergenic 50.0%
!!! AGGGTTTTGAGGGGTTATGG+AGG + chr2_1:40357413-40357432 None:intergenic 50.0%
!!! TATTGGGGGAGGGTTTTGAG+GGG + chr2_1:40357422-40357441 None:intergenic 50.0%
!! GTATTGGGGGAGGGTTTTGA+GGG + chr2_1:40357423-40357442 None:intergenic 50.0%
! TGTATTGGGGGAGGGTTTTG+AGG + chr2_1:40357424-40357443 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr2_1:40357211-40357230 None:intergenic 50.0%
CCTCTGATGAGATTTGGGCA+TGG + chr2_1:40357687-40357706 None:intergenic 50.0%
CCATGCCCAAATCTCATCAG+AGG - chr2_1:40357684-40357703 Msa0207710:intron 50.0%
TGACTGTTTGACTGCCACAG+TGG - chr2_1:40357888-40357907 Msa0207710:intron 50.0%
TTCCTCTATGTCTGCCACTG+TGG + chr2_1:40357905-40357924 None:intergenic 50.0%
AACTGTGTGGATATGGAGGG+TGG - chr2_1:40357968-40357987 Msa0207710:intron 50.0%
! CAAGGTCAGAGCATCTTACC+CGG + chr2_1:40358008-40358027 None:intergenic 50.0%
CGTCCCTGGTAAGCATAAAC+AGG + chr2_1:40358073-40358092 None:intergenic 50.0%
GTAATCTACACTAGGAGCGG+TGG + chr2_1:40358131-40358150 None:intergenic 50.0%
CCATCACTCACATGTGTAGG+AGG + chr2_1:40358513-40358532 None:intergenic 50.0%
CCTCCTACACATGTGAGTGA+TGG - chr2_1:40358510-40358529 Msa0207710:intron 50.0%
GAGCTTCAAGCAGTATCCCA+CGG - chr2_1:40358695-40358714 Msa0207710:intron 50.0%
!! GTCAGGATTGGTTTGGCGGT+AGG + chr2_1:40352741-40352760 None:intergenic 55.0%
GGTTCTTACTCACTCAGCGG+TGG + chr2_1:40352787-40352806 None:intergenic 55.0%
ACTTCTTCCGAAAACGCCGC+CGG - chr2_1:40352813-40352832 Msa0207710:three_prime_UTR 55.0%
TCATATGTGCTCGTGACCGC+TGG - chr2_1:40353995-40354014 Msa0207710:intron 55.0%
!! ACCGCTGGCTCAAACCAACA+GGG - chr2_1:40354010-40354029 Msa0207710:intron 55.0%
AGTGAAGGGCAAACCCTTGG+AGG + chr2_1:40354650-40354669 None:intergenic 55.0%
GCATGTGGATGGCACCCATT+AGG - chr2_1:40355032-40355051 Msa0207710:intron 55.0%
TGGATGGCACCCATTAGGAC+TGG - chr2_1:40355037-40355056 Msa0207710:intron 55.0%
GGATGGCACCCATTAGGACT+GGG - chr2_1:40355038-40355057 Msa0207710:intron 55.0%
GGGCGATTACCAGTCAGCTA+TGG - chr2_1:40355078-40355097 Msa0207710:intron 55.0%
ACCAGTCAGCTATGGGCGAT+TGG - chr2_1:40355086-40355105 Msa0207710:intron 55.0%
! AGCCTTTTGCTGAGGAGCAG+AGG - chr2_1:40355167-40355186 Msa0207710:intron 55.0%
GGCTGCTATGTCCCTTACAG+TGG + chr2_1:40355754-40355773 None:intergenic 55.0%
CGGAGACTCACTGGAAATGG+AGG + chr2_1:40356037-40356056 None:intergenic 55.0%
CGTGCGGTTGAATGATGCCA+TGG - chr2_1:40356634-40356653 Msa0207710:intron 55.0%
GAAATGTGCGCTAGCTCAGC+TGG - chr2_1:40356902-40356921 Msa0207710:intron 55.0%
!! AGAGCAGTTGGTGTTGCACG+AGG - chr2_1:40356978-40356997 Msa0207710:CDS 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr2_1:40357217-40357236 Msa0207710:intron 55.0%
!!! GGGAGGGTTTTGAGGGGTTA+TGG + chr2_1:40357416-40357435 None:intergenic 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + chr2_1:40357504-40357523 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr2_1:40357575-40357594 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr2_1:40357217-40357236 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr2_1:40357216-40357235 None:intergenic 55.0%
TGCCACAGTGGCAGACATAG+AGG - chr2_1:40357900-40357919 Msa0207710:intron 55.0%
TGCTTACCAGGGACGAAGTG+AGG - chr2_1:40358078-40358097 Msa0207710:intron 55.0%
GCTTGAAGCTCCGCGAACAA+AGG + chr2_1:40358686-40358705 None:intergenic 55.0%
! GTCGACTTCTTTGGGGACGG+CGG + chr2_1:40352853-40352872 None:intergenic 60.0%
!! GACCGCTGGCTCAAACCAAC+AGG - chr2_1:40354009-40354028 Msa0207710:intron 60.0%
!! CCCCTGTTGGTTTGAGCCAG+CGG + chr2_1:40354014-40354033 None:intergenic 60.0%
!! CCGCTGGCTCAAACCAACAG+GGG - chr2_1:40354011-40354030 Msa0207710:intron 60.0%
GCCAATCGCCCATAGCTGAC+TGG + chr2_1:40355090-40355109 None:intergenic 60.0%
GGCATCATTCAACCGCACGC+AGG + chr2_1:40356633-40356652 None:intergenic 60.0%
TGCGCTAGCTCAGCTGGACT+GGG - chr2_1:40356908-40356927 Msa0207710:intron 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG - chr2_1:40357222-40357241 Msa0207710:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr2_1:40357223-40357242 Msa0207710:intron 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + chr2_1:40357501-40357520 None:intergenic 60.0%
CTGGATCCTCACTTCGTCCC+TGG + chr2_1:40358087-40358106 None:intergenic 60.0%
CTGTACACACTGGGGTCAGC+AGG - chr2_1:40358150-40358169 Msa0207710:CDS 60.0%
TCTTCCGAAAACGCCGCCGG+TGG - chr2_1:40352816-40352835 Msa0207710:three_prime_UTR 65.0%
GTGCGCTAGCTCAGCTGGAC+TGG - chr2_1:40356907-40356926 Msa0207710:intron 65.0%
GCGCTAGCTCAGCTGGACTG+GGG - chr2_1:40356909-40356928 Msa0207710:intron 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG - chr2_1:40357221-40357240 Msa0207710:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr2_1:40357226-40357245 Msa0207710:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr2_1:40357227-40357246 Msa0207710:intron 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - chr2_1:40357234-40357253 Msa0207710:intron 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG - chr2_1:40357235-40357254 Msa0207710:intron 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - chr2_1:40357236-40357255 Msa0207710:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr2_1:40357570-40357589 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr2_1:40357571-40357590 None:intergenic 65.0%
TCCGAAAACGCCGCCGGTGG+TGG - chr2_1:40352819-40352838 Msa0207710:three_prime_UTR 70.0%
! GCCACCACCGGCGGCGTTTT+CGG + chr2_1:40352823-40352842 None:intergenic 70.0%
! CTTTGGGGACGGCGGTGCCT+CGG + chr2_1:40352845-40352864 None:intergenic 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG - chr2_1:40357233-40357252 Msa0207710:intron 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG - chr2_1:40357237-40357256 Msa0207710:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG - chr2_1:40357241-40357260 Msa0207710:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG + chr2_1:40357560-40357579 None:intergenic 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + chr2_1:40357566-40357585 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr2_1:40357567-40357586 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr2_1:40357572-40357591 None:intergenic 70.0%
!! AACGCCGCCGGTGGTGGCCG+AGG - chr2_1:40352825-40352844 Msa0207710:three_prime_UTR 80.0%
! GGTGCCTCGGCCACCACCGG+CGG + chr2_1:40352832-40352851 None:intergenic 80.0%
! GGCGGTGCCTCGGCCACCAC+CGG + chr2_1:40352835-40352854 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 40352708 40359477 40352708 ID=Msa0207710;Name=Msa0207710
chr2_1 mRNA 40352708 40359477 40352708 ID=Msa0207710-mRNA-1;Parent=Msa0207710;Name=Msa0207710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=99|0.75|0.77|0.88|1|0.88|9|513|388
chr2_1 exon 40352708 40353175 40352708 ID=Msa0207710-mRNA-1:exon:12499;Parent=Msa0207710-mRNA-1
chr2_1 exon 40353469 40353690 40353469 ID=Msa0207710-mRNA-1:exon:12498;Parent=Msa0207710-mRNA-1
chr2_1 exon 40354014 40354097 40354014 ID=Msa0207710-mRNA-1:exon:12497;Parent=Msa0207710-mRNA-1
chr2_1 exon 40354177 40354362 40354177 ID=Msa0207710-mRNA-1:exon:12496;Parent=Msa0207710-mRNA-1
chr2_1 exon 40356809 40356846 40356809 ID=Msa0207710-mRNA-1:exon:12495;Parent=Msa0207710-mRNA-1
chr2_1 exon 40356977 40357170 40356977 ID=Msa0207710-mRNA-1:exon:12494;Parent=Msa0207710-mRNA-1
chr2_1 exon 40358148 40358253 40358148 ID=Msa0207710-mRNA-1:exon:12493;Parent=Msa0207710-mRNA-1
chr2_1 exon 40358919 40359111 40358919 ID=Msa0207710-mRNA-1:exon:12492;Parent=Msa0207710-mRNA-1
chr2_1 exon 40359190 40359477 40359190 ID=Msa0207710-mRNA-1:exon:12491;Parent=Msa0207710-mRNA-1
chr2_1 five_prime_UTR 40359379 40359477 40359379 ID=Msa0207710-mRNA-1:five_prime_utr;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40359190 40359378 40359190 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40358919 40359111 40358919 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40358148 40358253 40358148 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40356977 40357170 40356977 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40356809 40356846 40356809 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40354177 40354362 40354177 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40354014 40354097 40354014 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 CDS 40353514 40353690 40353514 ID=Msa0207710-mRNA-1:cds;Parent=Msa0207710-mRNA-1
chr2_1 three_prime_UTR 40353469 40353513 40353469 ID=Msa0207710-mRNA-1:three_prime_utr;Parent=Msa0207710-mRNA-1
chr2_1 three_prime_UTR 40352708 40353175 40352708 ID=Msa0207710-mRNA-1:three_prime_utr;Parent=Msa0207710-mRNA-1
Gene Sequence

>Msa0207710

ATGGGCACTTCTTCCGAAAACGCCGCCGGTGGTGGCCGAGGCACCGCCGTCCCCAAAGAAGTCGACTACGCTAATTACTTTTGCACCTACTCCTTTCTCTATCACCAAAAAGAAATGCTCTCAGATCGTGTTCGTATGGATGCTTACTTCAACGCTGTTTTTGAAAACAAACACCACTTTAAAGACAAGGTTGTTTTGGATGTTGGTGCTGGAAGTGGGATTCTTGCTATATGGTCAGCTCAAGCAGGTGCAAAGAAGGTTTATGCTGTTGAAGCTACTAAGATGTCGGAACATGCTCGTGCGCTTGTGAAATCGAATAATCTTGAGCAGGTTGTTGAGGTTATTGAGGGTTCTGTTGAGGATGTTACATTGCCTGAGAAAGTTGATGTTATCATCTCTGAATGGATGGGTTATTTTCTTTTGCGAGAATCTATGTTTGATTCTGTCATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGGGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATTAGGACTGGGATAGTAGAACAAAAGTTGGGCGATTACCAGTCAGCTATGGGCGATTGGCACAACTTTGTCGATGAAACAAAAGCCTTCTATGGTGTTGATATGAGCACTTTGGCAAAGCCTTTTGCTGAGGAGCAGAGGAAATACTATCTACAGGCAAAGTTGAACAATCCTAATCCCCACATGGAATTCATTTTGACATCGTTGTGGAGCAATCTTCATCCACATCAAGTCATAGGAACTGCTGGTCTAGTAAAGGAAATTGACTGTTTGACTGCCACAGTGGCAGACATAGAGGAAGTCAGATCAAACTTTTCTCTGTCAATAACCACAGAGAACACAAAACTGTGTGGATATGGAGGGTGGTTTGATGTACATTTCCGGGGACGAAGTGAGGATCCAGCTGAACATGAGATTGAGTTAACCACCGCTCCTAGTGTAGATTACTGTACACACTGGGGTCAGCAGGTTTTCCTCTTAAATCCTCCTACACATGTGAGTGATGGTGATGAGCTAACTGTTAATTTTCTAATGAGTCGCTCGAAGGGAAACCATCGTTTAATGGAGGTTGAGCTTGGCTGTGAGATTCAAAAGCATTCGGGCAAGCTTGCTACACCTTTCAAAAATAAGTACTATATTGAATGA
Protein sequence

>Msa0207710

MGTSSENAAGGGRGTAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKSNNLEQVVEVIEGSVEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIVEQKLGDYQSAMGDWHNFVDETKAFYGVDMSTLAKPFAEEQRKYYLQAKLNNPNPHMEFILTSLWSNLHPHQVIGTAGLVKEIDCLTATVADIEEVRSNFSLSITTENTKLCGYGGWFDVHFRGRSEDPAEHEIELTTAPSVDYCTHWGQQVFLLNPPTHVSDGDELTVNFLMSRSKGNHRLMEVELGCEIQKHSGKLATPFKNKYYIE*