Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209840 | XP_039686411.1 | 85.882 | 85 | 12 | 0 | 31 | 115 | 298 | 382 | 1.50e-37 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209840 | A0A072V7V3 | 85.882 | 85 | 12 | 0 | 31 | 115 | 298 | 382 | 7.17e-38 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0208720 | Msa0209840 | 0.841025 | 6.101579e-58 | -8.615850e-47 |
| Msa0209840 | Msa0902070 | 0.828152 | 1.053863e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0209840 | MtrunA17_Chr2g0298151 | 85.882 | 85 | 12 | 0 | 31 | 115 | 298 | 382 | 1.48e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 222 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTGTGATGGTTAAATT+TGG | 0.075568 | 2_1:+49327219 | None:intergenic |
| GATGGAAGTCCTGGCCTTTC+AGG | 0.160579 | 2_1:-49329991 | Msa0209840:three_prime_UTR |
| GTGAAGGGATACAGTATTTC+TGG | 0.166430 | 2_1:-49330262 | Msa0209840:three_prime_UTR |
| CTGCCGTTTCCTAGTTATTT+TGG | 0.183416 | 2_1:-49330090 | Msa0209840:three_prime_UTR |
| TAACTCAGGCTTTCAGAATT+TGG | 0.199662 | 2_1:+49330832 | None:intergenic |
| TTATTAGCTTCTGGTGTTTC+GGG | 0.205282 | 2_1:-49327506 | Msa0209840:three_prime_UTR |
| GATAAGGGAGTTTCTTAAAA+AGG | 0.207017 | 2_1:+49327124 | None:intergenic |
| AACAAGTACCTTGGGCAATT+TGG | 0.226451 | 2_1:-49330346 | Msa0209840:three_prime_UTR |
| GCCTGAATATTATTGTAAAA+TGG | 0.227587 | 2_1:+49330568 | None:intergenic |
| ATTATTAGCTTCTGGTGTTT+CGG | 0.238766 | 2_1:-49327507 | Msa0209840:three_prime_UTR |
| GTATTACATGATTCCCGTTT+TGG | 0.240757 | 2_1:+49327854 | None:intergenic |
| CATGATTAGTTATTAGAATT+AGG | 0.243056 | 2_1:-49326721 | Msa0209840:three_prime_UTR |
| ATGAACAGGTCTAAATTTAT+TGG | 0.259331 | 2_1:+49326935 | None:intergenic |
| TGATTAAATTGCATGTAAAT+AGG | 0.266681 | 2_1:+49330295 | None:intergenic |
| TCCTTGTGGCCTTCACTAAT+AGG | 0.277306 | 2_1:-49326681 | Msa0209840:three_prime_UTR |
| TACAATATGTTCAATTATAT+CGG | 0.284564 | 2_1:+49329811 | None:intergenic |
| GCTGTACCATTTGTTGTTGA+TGG | 0.297035 | 2_1:-49330454 | Msa0209840:three_prime_UTR |
| TGCGACAGCAGCTGCTTATA+TGG | 0.303267 | 2_1:-49330602 | Msa0209840:three_prime_UTR |
| TTGAACATATTGTAGAATTT+AGG | 0.307280 | 2_1:-49329802 | Msa0209840:three_prime_UTR |
| AATTTATCAATGCATCCTTA+TGG | 0.321235 | 2_1:-49327760 | Msa0209840:three_prime_UTR |
| CACGTTCAAGCAACCAAAAT+AGG | 0.336790 | 2_1:-49326793 | Msa0209840:three_prime_UTR |
| GCAAGGAAGTTAACAATCTT+GGG | 0.342004 | 2_1:+49329872 | None:intergenic |
| TTTCCTGTACAGCCTTCTTT+TGG | 0.343539 | 2_1:-49330322 | Msa0209840:three_prime_UTR |
| TGCAAGGAAGTTAACAATCT+TGG | 0.343904 | 2_1:+49329871 | None:intergenic |
| GTCAGTTTGTTCTCTTGCTC+AGG | 0.347609 | 2_1:-49327592 | Msa0209840:three_prime_UTR |
| TCCTTGTGATGGTTAAATTT+GGG | 0.351831 | 2_1:+49327220 | None:intergenic |
| TCCTGTCACAGCAATTTCAT+AGG | 0.352036 | 2_1:+49327395 | None:intergenic |
| TTGAGCTATTAAAAGTATAA+TGG | 0.352479 | 2_1:-49326879 | Msa0209840:three_prime_UTR |
| ATAAAACCTTCCCCAGCTTC+TGG | 0.356966 | 2_1:-49329955 | Msa0209840:three_prime_UTR |
| GGAGGGTATGTAGAAATATA+TGG | 0.357337 | 2_1:+49330484 | None:intergenic |
| AGAAATTGAGGCATGGTATC+TGG | 0.360418 | 2_1:-49329931 | Msa0209840:three_prime_UTR |
| CCAGCCACTACTTCAGTAAT+CGG | 0.360960 | 2_1:-49330644 | Msa0209840:exon |
| AGCAACACTGCTGGCTGCCA+TGG | 0.363079 | 2_1:-49326519 | Msa0209840:three_prime_UTR |
| TGAAATTGTCTTATCCTATA+CGG | 0.369647 | 2_1:-49326984 | Msa0209840:three_prime_UTR |
| ATTTGAACAACACTTGCTAT+AGG | 0.372017 | 2_1:+49330220 | None:intergenic |
| CTGTACCATTTGTTGTTGAT+GGG | 0.373241 | 2_1:-49330453 | Msa0209840:three_prime_UTR |
| GTTTATTGTGGATGAAATCT+TGG | 0.375343 | 2_1:-49327616 | Msa0209840:three_prime_UTR |
| CTAACACCAGGGGTTTCAAC+CGG | 0.383150 | 2_1:-49330406 | Msa0209840:three_prime_UTR |
| TTCCTTGCAGAGTTGAAATC+TGG | 0.383537 | 2_1:-49329857 | Msa0209840:three_prime_UTR |
| AAATTCACAGAAAGAAGAAT+TGG | 0.386933 | 2_1:+49327299 | None:intergenic |
| CACTGCGATCGCGCCTCTAT+TGG | 0.386984 | 2_1:+49326548 | None:intergenic |
| AGCAGCTGCTGTCGCATATA+GGG | 0.389280 | 2_1:+49330609 | None:intergenic |
| AAGTTAATGACTGATGTATT+CGG | 0.389676 | 2_1:-49329590 | Msa0209840:three_prime_UTR |
| TACAATAATATTCAGGCCTC+AGG | 0.390617 | 2_1:-49330562 | Msa0209840:three_prime_UTR |
| AAGCAGCTGCTGTCGCATAT+AGG | 0.391993 | 2_1:+49330608 | None:intergenic |
| ATTAAAGTTGCAGCCGCAAT+AGG | 0.394170 | 2_1:-49326476 | Msa0209840:three_prime_UTR |
| AGGGTGTACACTTTGAGAAT+TGG | 0.396528 | 2_1:+49330720 | None:intergenic |
| GGCAACTTGCTTGAATTATG+AGG | 0.396871 | 2_1:+49330673 | None:intergenic |
| TCTGGATATCCAGACAAAAC+TGG | 0.398981 | 2_1:+49330012 | None:intergenic |
| TCCGTTCTATCTGTAGCTTA+TGG | 0.403283 | 2_1:-49327434 | Msa0209840:three_prime_UTR |
| GATGGTTTACAGTGATTGTT+TGG | 0.403969 | 2_1:-49326631 | Msa0209840:three_prime_UTR |
| CTTCATATCGTTATGGTAGC+TGG | 0.410037 | 2_1:+49330792 | None:intergenic |
| TACATTACAAAGCCCGTGTT+TGG | 0.415737 | 2_1:+49330060 | None:intergenic |
| TGAAGTAGTGGCTGGACATC+AGG | 0.422179 | 2_1:+49330652 | None:intergenic |
| GAGGGAACTTGCAGATAAAC+TGG | 0.423438 | 2_1:-49329427 | Msa0209840:three_prime_UTR |
| CCTTTGAGTCTGCAGATGTA+TGG | 0.425713 | 2_1:-49329390 | Msa0209840:three_prime_UTR |
| TGTTCCCTGCCAACGTAGGC+AGG | 0.426429 | 2_1:+49330700 | None:intergenic |
| CATACGGACTTCTTTGTTGT+GGG | 0.429886 | 2_1:+49330755 | None:intergenic |
| AGCTCAGCTTGTTCGTGAGC+TGG | 0.434695 | 2_1:-49327905 | Msa0209840:three_prime_UTR |
| TACACCCTGCCTACGTTGGC+AGG | 0.439547 | 2_1:-49330705 | Msa0209840:CDS |
| GCAAGTTCCCTCCTCTGCTA+AGG | 0.440828 | 2_1:+49329438 | None:intergenic |
| CAGCCACTACTTCAGTAATC+GGG | 0.449872 | 2_1:-49330643 | Msa0209840:exon |
| GCTGGAACACTTGCAGCTTA+AGG | 0.452299 | 2_1:-49326962 | Msa0209840:three_prime_UTR |
| CAAAAGATTCAAAAGGGCTT+AGG | 0.454877 | 2_1:+49327273 | None:intergenic |
| TATTTCGCATGGAGCTGAAA+TGG | 0.456375 | 2_1:-49330377 | Msa0209840:three_prime_UTR |
| TCTCTTGCTCAGGACCTGTA+TGG | 0.459100 | 2_1:-49327582 | Msa0209840:three_prime_UTR |
| CCGCTAACAAAAGATTCAAA+AGG | 0.459950 | 2_1:+49327266 | None:intergenic |
| AATCACTTGTACAAATGAAC+AGG | 0.463574 | 2_1:+49326921 | None:intergenic |
| CCAGCTTCTGGTAGAAATTG+AGG | 0.463746 | 2_1:-49329943 | Msa0209840:three_prime_UTR |
| TAACACCAGGGGTTTCAACC+GGG | 0.464270 | 2_1:-49330405 | Msa0209840:three_prime_UTR |
| CAAGTTCCCTCCTCTGCTAA+GGG | 0.464622 | 2_1:+49329439 | None:intergenic |
| GGATATCCAGATGGAAGTCC+TGG | 0.466778 | 2_1:-49330000 | Msa0209840:three_prime_UTR |
| TACTTGGGTTGTAATAATGA+TGG | 0.467069 | 2_1:-49326649 | Msa0209840:three_prime_UTR |
| CTTTGAGAGGTATTGCAGAT+TGG | 0.467858 | 2_1:-49326842 | Msa0209840:three_prime_UTR |
| GATTGGCTTTAGAGAAGTAA+AGG | 0.469005 | 2_1:-49326825 | Msa0209840:three_prime_UTR |
| TGACCACTATCAAAGGATCT+TGG | 0.470659 | 2_1:+49329899 | None:intergenic |
| TCGATTTATACAACAGAAGC+TGG | 0.473377 | 2_1:-49329672 | Msa0209840:three_prime_UTR |
| TAATAGGAAAAGGTACTACT+TGG | 0.474319 | 2_1:-49326665 | Msa0209840:three_prime_UTR |
| ATTAAACTGCTTAAAGAAAG+AGG | 0.476485 | 2_1:-49331216 | Msa0209840:five_prime_UTR |
| CCTCAATTTCTACCAGAAGC+TGG | 0.480240 | 2_1:+49329943 | None:intergenic |
| CTCAATTTCTACCAGAAGCT+GGG | 0.482229 | 2_1:+49329944 | None:intergenic |
| GAAAGGCCAGGACTTCCATC+TGG | 0.482564 | 2_1:+49329994 | None:intergenic |
| GCCGTTGCTTCATATCGTTA+TGG | 0.482878 | 2_1:+49330785 | None:intergenic |
| GGACTGGGAGGTGGTGAACC+TGG | 0.483464 | 2_1:+49330033 | None:intergenic |
| TGCAAGTGTTCCAGCCGTAT+AGG | 0.484708 | 2_1:+49326970 | None:intergenic |
| GATGTGTTGATGTAGTGAAT+TGG | 0.486051 | 2_1:-49330915 | Msa0209840:intron |
| GTTGAAACCCCTGGTGTTAG+CGG | 0.487624 | 2_1:+49330409 | None:intergenic |
| TCGCCAAAAGAAGGCTGTAC+AGG | 0.491818 | 2_1:+49330319 | None:intergenic |
| TGAGAAAGAAGATATATAGT+TGG | 0.492637 | 2_1:-49327477 | Msa0209840:three_prime_UTR |
| GATGTGTTTGTGACCAAAAC+GGG | 0.493665 | 2_1:-49327867 | Msa0209840:three_prime_UTR |
| TAGTCAATTGCGGCCAATAG+AGG | 0.494248 | 2_1:-49326561 | Msa0209840:three_prime_UTR |
| CGCTAACAAAAGATTCAAAA+GGG | 0.498130 | 2_1:+49327267 | None:intergenic |
| TGGCCTTCACTAATAGGAAA+AGG | 0.500953 | 2_1:-49326675 | Msa0209840:three_prime_UTR |
| CCCTATGAAATTGCTGTGAC+AGG | 0.500974 | 2_1:-49327396 | Msa0209840:three_prime_UTR |
| TCGATTTCGACTTACAAAGT+TGG | 0.503724 | 2_1:-49327817 | Msa0209840:three_prime_UTR |
| ATTGGCTTTAGAGAAGTAAA+GGG | 0.504119 | 2_1:-49326824 | Msa0209840:three_prime_UTR |
| GAAAGAAGATATATAGTTGG+AGG | 0.505814 | 2_1:-49327474 | Msa0209840:three_prime_UTR |
| ATCTCACGAATGGCGGTGCT+AGG | 0.506207 | 2_1:+49331152 | None:intergenic |
| CCTGTCACAGCAATTTCATA+GGG | 0.508006 | 2_1:+49327396 | None:intergenic |
| GGCTTTGTAATGTACTATCC+AGG | 0.508549 | 2_1:-49330051 | Msa0209840:three_prime_UTR |
| AGCTATGCTCCGCTAACACC+AGG | 0.511862 | 2_1:-49330418 | Msa0209840:three_prime_UTR |
| TTAATACTATCTGCATTTCG+TGG | 0.512039 | 2_1:-49327793 | Msa0209840:three_prime_UTR |
| AAATTACATGAACAGAGAAC+TGG | 0.512344 | 2_1:-49330141 | Msa0209840:three_prime_UTR |
| GGGTAACATAATTACCATAC+AGG | 0.515883 | 2_1:+49327568 | None:intergenic |
| ATACTGTATCCCTTCACAAA+AGG | 0.515956 | 2_1:+49330268 | None:intergenic |
| AGGCATGGTATCTGGATGTA+TGG | 0.520636 | 2_1:-49329923 | Msa0209840:three_prime_UTR |
| GTGTTGCAGAGCAACACTGC+TGG | 0.522167 | 2_1:-49326528 | Msa0209840:three_prime_UTR |
| TCATACGGACTTCTTTGTTG+TGG | 0.525056 | 2_1:+49330754 | None:intergenic |
| AACAAATAAGCACCAGTACC+AGG | 0.525629 | 2_1:+49330171 | None:intergenic |
| TATGACATCATTTGTCCTTG+TGG | 0.526945 | 2_1:-49326695 | Msa0209840:three_prime_UTR |
| CAGCTTGTTCGTGAGCTGGA+TGG | 0.530950 | 2_1:-49327901 | Msa0209840:three_prime_UTR |
| GTAGCCCCATCAACAACAAA+TGG | 0.531711 | 2_1:+49330448 | None:intergenic |
| TGGCTGTCGTGTAATCCAAA+AGG | 0.531936 | 2_1:-49329370 | Msa0209840:intron |
| ATTGTCTTATCCTATACGGC+TGG | 0.534338 | 2_1:-49326980 | Msa0209840:three_prime_UTR |
| TAAATAGGATCGCCAAAAGA+AGG | 0.534846 | 2_1:+49330310 | None:intergenic |
| GGTTCAGTGTCAGTTTATTG+TGG | 0.535825 | 2_1:-49327628 | Msa0209840:three_prime_UTR |
| TTTCTACCTCCTGAAAGGCC+AGG | 0.536903 | 2_1:+49329982 | None:intergenic |
| TACATGCGAACAAGTACCTT+GGG | 0.537124 | 2_1:-49330354 | Msa0209840:three_prime_UTR |
| TTCAGCAATACTTATTTGTG+AGG | 0.539368 | 2_1:-49327033 | Msa0209840:three_prime_UTR |
| ACTAATCATGTATATTCTTG+CGG | 0.541739 | 2_1:+49326734 | None:intergenic |
| CACAGCAATTTCATAGGGTG+TGG | 0.542320 | 2_1:+49327401 | None:intergenic |
| TGGATGACTCGACAACCATA+AGG | 0.542908 | 2_1:+49327745 | None:intergenic |
| TACACTCCTCAATATGTTGG+TGG | 0.549567 | 2_1:-49330535 | Msa0209840:three_prime_UTR |
| GTGTATCCACCAACATATTG+AGG | 0.550135 | 2_1:+49330529 | None:intergenic |
| GAAAGCATTGGTGTTCAAAG+AGG | 0.551037 | 2_1:-49329630 | Msa0209840:three_prime_UTR |
| TTTCATTTCTACCTCCTGAA+AGG | 0.551052 | 2_1:+49329977 | None:intergenic |
| TGCCAGATTTCAACTCTGCA+AGG | 0.551259 | 2_1:+49329855 | None:intergenic |
| ATATCCAGACAAAACTGGAC+TGG | 0.551778 | 2_1:+49330017 | None:intergenic |
| GACAAAACTGGACTGGGAGG+TGG | 0.552055 | 2_1:+49330024 | None:intergenic |
| CCGATTACTGAAGTAGTGGC+TGG | 0.553954 | 2_1:+49330644 | None:intergenic |
| TCCTATTAGTGAAGGCCACA+AGG | 0.553966 | 2_1:+49326680 | None:intergenic |
| AGCATGATTTGTGACGGTCT+TGG | 0.554886 | 2_1:-49327368 | Msa0209840:three_prime_UTR |
| ACCTCCAGCTTTGATCAGCA+TGG | 0.555398 | 2_1:-49329698 | Msa0209840:intron |
| TTTGGACATGTGCCAAACAC+GGG | 0.555490 | 2_1:-49330072 | Msa0209840:three_prime_UTR |
| TAGTACAAAACTCCTTGTGA+TGG | 0.559805 | 2_1:+49327209 | None:intergenic |
| ATTGTTTGGTGTTTACAAGT+GGG | 0.564502 | 2_1:-49326617 | Msa0209840:three_prime_UTR |
| ACATATTGTAGAATTTAGGC+AGG | 0.565482 | 2_1:-49329798 | Msa0209840:intron |
| CGATACACTCCTCAATATGT+TGG | 0.567361 | 2_1:-49330538 | Msa0209840:three_prime_UTR |
| AGATGTGTTTGTGACCAAAA+CGG | 0.568375 | 2_1:-49327868 | Msa0209840:three_prime_UTR |
| TATGTCCGTGCAGGCACTCG+AGG | 0.569397 | 2_1:-49327947 | Msa0209840:intron |
| TTGCAGAGTTTGTGCAGACG+AGG | 0.569430 | 2_1:-49327649 | Msa0209840:intron |
| TGCAGCATAGGAACATCGTT+AGG | 0.570773 | 2_1:-49331112 | Msa0209840:intron |
| CCATACATCTGCAGACTCAA+AGG | 0.571137 | 2_1:+49329390 | None:intergenic |
| ATGGAAACCCTTAGCAGAGG+AGG | 0.571257 | 2_1:-49329446 | Msa0209840:three_prime_UTR |
| TGTCCAAAATAACTAGGAAA+CGG | 0.572570 | 2_1:+49330087 | None:intergenic |
| TTATGGTTGTCGAGTCATCC+AGG | 0.572576 | 2_1:-49327743 | Msa0209840:intron |
| GATGCAGCAAGCAACTAACC+TGG | 0.573422 | 2_1:+49327547 | None:intergenic |
| TGTACCATTTGTTGTTGATG+GGG | 0.573810 | 2_1:-49330452 | Msa0209840:three_prime_UTR |
| GATTGTTTGGTGTTTACAAG+TGG | 0.576440 | 2_1:-49326618 | Msa0209840:three_prime_UTR |
| TTTCTACCAGAAGCTGGGGA+AGG | 0.581309 | 2_1:+49329949 | None:intergenic |
| TCCATGCGAAATATTACCCC+CGG | 0.584110 | 2_1:+49330387 | None:intergenic |
| GGCACATGTCCAAAATAACT+AGG | 0.584700 | 2_1:+49330081 | None:intergenic |
| CAACATATTGAGGAGTGTAT+CGG | 0.587324 | 2_1:+49330539 | None:intergenic |
| GAACTTGCAGATAAACTGGC+TGG | 0.589605 | 2_1:-49329423 | Msa0209840:three_prime_UTR |
| TCGACTTGAACAGAAGATGA+AGG | 0.590689 | 2_1:-49331179 | Msa0209840:exon |
| GTCATTAACTTAGAAGCATG+TGG | 0.592971 | 2_1:+49329602 | None:intergenic |
| ACCATAAGCTACAGATAGAA+CGG | 0.593949 | 2_1:+49327433 | None:intergenic |
| GGGGTCTTGACCACTATCAA+AGG | 0.596242 | 2_1:+49329892 | None:intergenic |
| CAACAGAAGCTGGAAAGTTG+TGG | 0.600199 | 2_1:-49329662 | Msa0209840:three_prime_UTR |
| AACTGCTTAAAGAAAGAGGA+AGG | 0.600887 | 2_1:-49331212 | Msa0209840:five_prime_UTR |
| GTACATGCGAACAAGTACCT+TGG | 0.606768 | 2_1:-49330355 | Msa0209840:three_prime_UTR |
| ATATATGGATGAACCGCGGT+GGG | 0.607074 | 2_1:+49330499 | None:intergenic |
| ATTTCTACATACCCTCCTCA+TGG | 0.607245 | 2_1:-49330478 | Msa0209840:three_prime_UTR |
| AACCAAAATAGGAAAAGTAG+AGG | 0.608998 | 2_1:-49326782 | Msa0209840:three_prime_UTR |
| GTATGGTAATTATGTTACCC+AGG | 0.610531 | 2_1:-49327565 | Msa0209840:three_prime_UTR |
| ACACTTGCTATAGGTGCCTG+TGG | 0.611170 | 2_1:+49330229 | None:intergenic |
| AACACCAGGGGTTTCAACCG+GGG | 0.611630 | 2_1:-49330404 | Msa0209840:three_prime_UTR |
| TTGCATAGAATTGTTCAATG+TGG | 0.613313 | 2_1:+49326586 | None:intergenic |
| ACACTTTGAGAATTGGCACT+AGG | 0.614613 | 2_1:+49330727 | None:intergenic |
| ACACCAGGGGTTTCAACCGG+GGG | 0.614681 | 2_1:-49330403 | Msa0209840:three_prime_UTR |
| TTGGCACTAGGAACTTCATA+CGG | 0.614765 | 2_1:+49330739 | None:intergenic |
| AGTGTACACCCTGCCTACGT+TGG | 0.615923 | 2_1:-49330709 | Msa0209840:CDS |
| GTTCCCTGCCAACGTAGGCA+GGG | 0.616500 | 2_1:+49330701 | None:intergenic |
| TATCCAGACAAAACTGGACT+GGG | 0.616787 | 2_1:+49330018 | None:intergenic |
| GAGCAGCGAAATCTCACGAA+TGG | 0.617623 | 2_1:+49331142 | None:intergenic |
| ATTGTAAAATGGATTTACAG+AGG | 0.617692 | 2_1:+49330579 | None:intergenic |
| AGTATGAACTCAAGAAGAGG+TGG | 0.619808 | 2_1:-49330114 | Msa0209840:three_prime_UTR |
| TGCTCAAAGAAATGCAGCAT+AGG | 0.620366 | 2_1:-49331124 | Msa0209840:CDS |
| GGTCCAAGATCCTTTGATAG+TGG | 0.623743 | 2_1:-49329902 | Msa0209840:three_prime_UTR |
| CAGCGAAATCTCACGAATGG+CGG | 0.626334 | 2_1:+49331145 | None:intergenic |
| TGGAAACCCTTAGCAGAGGA+GGG | 0.626448 | 2_1:-49329445 | Msa0209840:three_prime_UTR |
| TTGAGGAGTGTATCGGCCTG+AGG | 0.627359 | 2_1:+49330546 | None:intergenic |
| AACCCCGATTACTGAAGTAG+TGG | 0.629591 | 2_1:+49330640 | None:intergenic |
| AATAGGAAAAGGTACTACTT+GGG | 0.629637 | 2_1:-49326664 | Msa0209840:three_prime_UTR |
| TTCTGGTAGAAATTGAGGCA+TGG | 0.631228 | 2_1:-49329938 | Msa0209840:three_prime_UTR |
| AAAAGTGTTAGCTTCAAACA+AGG | 0.631362 | 2_1:+49327060 | None:intergenic |
| GCAGAGTTGAAATCTGGCAA+AGG | 0.632829 | 2_1:-49329851 | Msa0209840:three_prime_UTR |
| ACATTGAACAATTCTATGCA+AGG | 0.633253 | 2_1:-49326584 | Msa0209840:three_prime_UTR |
| TCCCAAATTTAACCATCACA+AGG | 0.634362 | 2_1:-49327221 | Msa0209840:three_prime_UTR |
| GAAAATAGCATGATTTGTGA+CGG | 0.634396 | 2_1:-49327374 | Msa0209840:three_prime_UTR |
| AAAAGTATAATGGCATACAA+TGG | 0.637091 | 2_1:-49326869 | Msa0209840:three_prime_UTR |
| ACACCCTGCCTACGTTGGCA+GGG | 0.639452 | 2_1:-49330704 | Msa0209840:CDS |
| ATGCAGCAAGCAACTAACCT+GGG | 0.639567 | 2_1:+49327548 | None:intergenic |
| AATGGTACAGCACCATGAGG+AGG | 0.640193 | 2_1:+49330466 | None:intergenic |
| CAAGGAAGTTAACAATCTTG+GGG | 0.640570 | 2_1:+49329873 | None:intergenic |
| TAACGATATGAAGCAACGGC+AGG | 0.641212 | 2_1:-49330782 | Msa0209840:CDS |
| AGCCACTACTTCAGTAATCG+GGG | 0.642698 | 2_1:-49330642 | Msa0209840:exon |
| ACCATAACGATATGAAGCAA+CGG | 0.643877 | 2_1:-49330786 | Msa0209840:CDS |
| ATGGTTAAATTTGGGAACAG+AGG | 0.645812 | 2_1:+49327228 | None:intergenic |
| GGAAGTCCTGGCCTTTCAGG+AGG | 0.646706 | 2_1:-49329988 | Msa0209840:three_prime_UTR |
| CTATGCAAGGTAGTCAATTG+CGG | 0.647236 | 2_1:-49326571 | Msa0209840:three_prime_UTR |
| CGGCAATCAAAACATCGCCA+TGG | 0.647777 | 2_1:+49326502 | None:intergenic |
| ATGGTACAGCACCATGAGGA+GGG | 0.648488 | 2_1:+49330467 | None:intergenic |
| CAGGAAATCCAAATTGCCCA+AGG | 0.650207 | 2_1:+49330338 | None:intergenic |
| GCTAGTATGAACTCAAGAAG+AGG | 0.653600 | 2_1:-49330117 | Msa0209840:three_prime_UTR |
| CGGTAACTACGTGATACAGA+AGG | 0.658396 | 2_1:-49329570 | Msa0209840:intron |
| TCAATTTCTACCAGAAGCTG+GGG | 0.661184 | 2_1:+49329945 | None:intergenic |
| CTATGCTCCGCTAACACCAG+GGG | 0.662445 | 2_1:-49330416 | Msa0209840:three_prime_UTR |
| AAAGTGTTAGCTTCAAACAA+GGG | 0.663242 | 2_1:+49327061 | None:intergenic |
| GTGTTAGCTTCAAACAAGGG+AGG | 0.664890 | 2_1:+49327064 | None:intergenic |
| AAACTGTTCCCTGCCAACGT+AGG | 0.667412 | 2_1:+49330696 | None:intergenic |
| GCTGCTGTCGCATATAGGGT+AGG | 0.668468 | 2_1:+49330613 | None:intergenic |
| AATATATGGATGAACCGCGG+TGG | 0.673680 | 2_1:+49330498 | None:intergenic |
| CCAGACAAAACTGGACTGGG+AGG | 0.676829 | 2_1:+49330021 | None:intergenic |
| TGGTGCTGAAGAGAAAGCAT+TGG | 0.685406 | 2_1:-49329642 | Msa0209840:three_prime_UTR |
| AGTATGGAAACCCTTAGCAG+AGG | 0.688958 | 2_1:-49329449 | Msa0209840:three_prime_UTR |
| ATACAATGGTGTGCTTTGAG+AGG | 0.696535 | 2_1:-49326855 | Msa0209840:three_prime_UTR |
| GCTATGCTCCGCTAACACCA+GGG | 0.696961 | 2_1:-49330417 | Msa0209840:three_prime_UTR |
| GCGGCTGCAACTTTAATACG+CGG | 0.726394 | 2_1:+49326482 | None:intergenic |
| ACAAATGGTACAGCACCATG+AGG | 0.727165 | 2_1:+49330463 | None:intergenic |
| AGAAATATATGGATGAACCG+CGG | 0.765452 | 2_1:+49330495 | None:intergenic |
| ATACACTTTAAATCCCACCG+CGG | 0.835942 | 2_1:-49330512 | Msa0209840:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATTATATACCTTT+TGG | + | chr2_1:49328354-49328373 | None:intergenic | 10.0% |
| !! | AAGTAAAATTATGTATTTAT+TGG | - | chr2_1:49328871-49328890 | Msa0209840:intron | 10.0% |
| !! | AGTAAAATTATGTATTTATT+GGG | - | chr2_1:49328872-49328891 | Msa0209840:intron | 10.0% |
| !!! | AATTTGTGATTTTTATATTA+TGG | + | chr2_1:49328985-49329004 | None:intergenic | 10.0% |
| !! | AAGAAAATAAAGAAAAAATA+AGG | - | chr2_1:49329283-49329302 | Msa0209840:intron | 10.0% |
| !! | TACAATATGTTCAATTATAT+CGG | + | chr2_1:49327898-49327917 | None:intergenic | 15.0% |
| !! | GTAAAATTATGTATTTATTG+GGG | - | chr2_1:49328873-49328892 | Msa0209840:intron | 15.0% |
| !! | TAAAATTATGTATTTATTGG+GGG | - | chr2_1:49328874-49328893 | Msa0209840:intron | 15.0% |
| !!! | ATTTGTTAATAACATTTAAC+CGG | + | chr2_1:49329182-49329201 | None:intergenic | 15.0% |
| !! | AATAGAATTATAAATTTCTC+AGG | + | chr2_1:49329572-49329591 | None:intergenic | 15.0% |
| !! | TTTAATAGAAAACAAAAAAC+AGG | + | chr2_1:49329638-49329657 | None:intergenic | 15.0% |
| !!! | ATAATTTTATTATTAGCTTC+TGG | - | chr2_1:49330191-49330210 | Msa0209840:three_prime_UTR | 15.0% |
| !! | TTCAAAAATAACAAATAAGT+AGG | + | chr2_1:49330702-49330721 | None:intergenic | 15.0% |
| !!! | TCCATTTTACAATAATATTC+AGG | - | chr2_1:49327137-49327156 | Msa0209840:three_prime_UTR | 20.0% |
| !! | TGATTAAATTGCATGTAAAT+AGG | + | chr2_1:49327414-49327433 | None:intergenic | 20.0% |
| !! | TTGAACATATTGTAGAATTT+AGG | - | chr2_1:49327904-49327923 | Msa0209840:three_prime_UTR | 20.0% |
| !! | GAATGCTATTGTTTAAATTA+TGG | - | chr2_1:49329314-49329333 | Msa0209840:intron | 20.0% |
| !! | TCTATTAAATCAAGATTGTT+TGG | - | chr2_1:49329649-49329668 | Msa0209840:three_prime_UTR | 20.0% |
| !! | GTTTCTTAAAAAGTAGATAA+GGG | + | chr2_1:49330600-49330619 | None:intergenic | 20.0% |
| !! | AGTTTCTTAAAAAGTAGATA+AGG | + | chr2_1:49330601-49330620 | None:intergenic | 20.0% |
| !!! | TTGAGCTATTAAAAGTATAA+TGG | - | chr2_1:49330827-49330846 | Msa0209840:CDS | 20.0% |
| !! | AGGAAACCAATAAAAATTAT+AGG | - | chr2_1:49330944-49330963 | Msa0209840:intron | 20.0% |
| !!! | GTTTGACCTATAATTTTTAT+TGG | + | chr2_1:49330953-49330972 | None:intergenic | 20.0% |
| !!! | CATGATTAGTTATTAGAATT+AGG | - | chr2_1:49330985-49331004 | Msa0209840:intron | 20.0% |
| ! | ATTAAACTGCTTAAAGAAAG+AGG | - | chr2_1:49326490-49326509 | Msa0209840:three_prime_UTR | 25.0% |
| ! | ATATGTTTGACGTTGTTAAT+TGG | - | chr2_1:49326681-49326700 | Msa0209840:three_prime_UTR | 25.0% |
| !! | TCAATTTTACTTCATAACTC+AGG | + | chr2_1:49326891-49326910 | None:intergenic | 25.0% |
| !! | ATTGTAAAATGGATTTACAG+AGG | + | chr2_1:49327130-49327149 | None:intergenic | 25.0% |
| ! | GCCTGAATATTATTGTAAAA+TGG | + | chr2_1:49327141-49327160 | None:intergenic | 25.0% |
| ! | TCCTTATGATTCACAAAAAA+AGG | - | chr2_1:49327512-49327531 | Msa0209840:three_prime_UTR | 25.0% |
| ! | AAGTTAATGACTGATGTATT+CGG | - | chr2_1:49328116-49328135 | Msa0209840:intron | 25.0% |
| ! | AAATTAGACCAAAACAGATT+CGG | + | chr2_1:49328209-49328228 | None:intergenic | 25.0% |
| ! | AAAACTAAACACATGAGAAA+GGG | + | chr2_1:49328234-49328253 | None:intergenic | 25.0% |
| ! | AAAAACTAAACACATGAGAA+AGG | + | chr2_1:49328235-49328254 | None:intergenic | 25.0% |
| !! | AGATTGTCATTTGAGAAAAT+CGG | + | chr2_1:49328592-49328611 | None:intergenic | 25.0% |
| !!! | TACTTTTATAGTCAAGTTGT+AGG | - | chr2_1:49328739-49328758 | Msa0209840:intron | 25.0% |
| !! | GTCTACATTTAATCTTTTCT+TGG | + | chr2_1:49328918-49328937 | None:intergenic | 25.0% |
| ! | GTTAAATAATATGCTCACTA+TGG | - | chr2_1:49328946-49328965 | Msa0209840:intron | 25.0% |
| ! | TGATAAACCTGTATGTTTAA+GGG | - | chr2_1:49329021-49329040 | Msa0209840:intron | 25.0% |
| !! | TAATATAAGTTGAACTGTTG+TGG | - | chr2_1:49329204-49329223 | Msa0209840:intron | 25.0% |
| ! | ACTTTCTATCATATAATCAG+TGG | - | chr2_1:49329229-49329248 | Msa0209840:intron | 25.0% |
| !!! | CTTTTCAAAAGTGTGATTTT+GGG | + | chr2_1:49329266-49329285 | None:intergenic | 25.0% |
| !!! | TCTTTTCAAAAGTGTGATTT+TGG | + | chr2_1:49329267-49329286 | None:intergenic | 25.0% |
| !!! | TTTTTTTCAAGACGTTGAAT+TGG | + | chr2_1:49329379-49329398 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCTGATACTATG+AGG | - | chr2_1:49329496-49329515 | Msa0209840:intron | 25.0% |
| ! | CAATAGAATACTTGTCTTAT+AGG | + | chr2_1:49329709-49329728 | None:intergenic | 25.0% |
| ! | AATTTATCAATGCATCCTTA+TGG | - | chr2_1:49329946-49329965 | Msa0209840:three_prime_UTR | 25.0% |
| ! | ACAAAAAGAAACTTCATTTC+AGG | + | chr2_1:49330010-49330029 | None:intergenic | 25.0% |
| ! | TGAGAAAGAAGATATATAGT+TGG | - | chr2_1:49330229-49330248 | Msa0209840:three_prime_UTR | 25.0% |
| ! | AAATTCACAGAAAGAAGAAT+TGG | + | chr2_1:49330410-49330429 | None:intergenic | 25.0% |
| ! | AGGTTCTTAAAAAGTAGATA+AGG | + | chr2_1:49330625-49330644 | None:intergenic | 25.0% |
| ! | TGAAATTGTCTTATCCTATA+CGG | - | chr2_1:49330722-49330741 | Msa0209840:CDS | 25.0% |
| ! | ATGAACAGGTCTAAATTTAT+TGG | + | chr2_1:49330774-49330793 | None:intergenic | 25.0% |
| !! | ACAAGTGATTTCAATTTTGA+TGG | - | chr2_1:49330798-49330817 | Msa0209840:CDS | 25.0% |
| !! | AAAAGTATAATGGCATACAA+TGG | - | chr2_1:49330837-49330856 | Msa0209840:CDS | 25.0% |
| ! | ACTAATCATGTATATTCTTG+CGG | + | chr2_1:49330975-49330994 | None:intergenic | 25.0% |
| !! | ATTTGAACAACACTTGCTAT+AGG | + | chr2_1:49327489-49327508 | None:intergenic | 30.0% |
| !!! | GCCTTTTTTTGTGAATCATA+AGG | + | chr2_1:49327516-49327535 | None:intergenic | 30.0% |
| AAATTACATGAACAGAGAAC+TGG | - | chr2_1:49327565-49327584 | Msa0209840:three_prime_UTR | 30.0% | |
| TGTCCAAAATAACTAGGAAA+CGG | + | chr2_1:49327622-49327641 | None:intergenic | 30.0% | |
| ACATATTGTAGAATTTAGGC+AGG | - | chr2_1:49327908-49327927 | Msa0209840:three_prime_UTR | 30.0% | |
| ! | AAGAATCTCATCGATTAGAT+AGG | + | chr2_1:49327957-49327976 | None:intergenic | 30.0% |
| TATCTAATCGATGAGATTCT+TGG | - | chr2_1:49327956-49327975 | Msa0209840:intron | 30.0% | |
| AATTAGACCAAAACAGATTC+GGG | + | chr2_1:49328208-49328227 | None:intergenic | 30.0% | |
| !!! | TGTGTTTAGTTTTTCGAGTA+TGG | - | chr2_1:49328241-49328260 | Msa0209840:intron | 30.0% |
| CTGAATTTCAAATGATCTGA+AGG | + | chr2_1:49328521-49328540 | None:intergenic | 30.0% | |
| GTTGTAATAAAAGGCAAACT+GGG | + | chr2_1:49328632-49328651 | None:intergenic | 30.0% | |
| TGTTGTAATAAAAGGCAAAC+TGG | + | chr2_1:49328633-49328652 | None:intergenic | 30.0% | |
| !! | ATTTATTGGGGGCTTTATTA+TGG | - | chr2_1:49328885-49328904 | Msa0209840:intron | 30.0% |
| CTGATAAACCTGTATGTTTA+AGG | - | chr2_1:49329020-49329039 | Msa0209840:intron | 30.0% | |
| GATAAACCTGTATGTTTAAG+GGG | - | chr2_1:49329022-49329041 | Msa0209840:intron | 30.0% | |
| TATAACCATAAGCAACAGAA+AGG | + | chr2_1:49329159-49329178 | None:intergenic | 30.0% | |
| AAGAAAAAATAAGGCCAACT+TGG | - | chr2_1:49329292-49329311 | Msa0209840:intron | 30.0% | |
| TAAACAATAGCATTCCAAGT+TGG | + | chr2_1:49329309-49329328 | None:intergenic | 30.0% | |
| TATGGAAAACAACAACATGT+TGG | - | chr2_1:49329332-49329351 | Msa0209840:intron | 30.0% | |
| TGCAACAAAACTGTATACAT+GGG | + | chr2_1:49329455-49329474 | None:intergenic | 30.0% | |
| ATGCAACAAAACTGTATACA+TGG | + | chr2_1:49329456-49329475 | None:intergenic | 30.0% | |
| GTAATTGCATAATTCAGAGT+TGG | - | chr2_1:49329601-49329620 | Msa0209840:three_prime_UTR | 30.0% | |
| TTAATACTATCTGCATTTCG+TGG | - | chr2_1:49329913-49329932 | Msa0209840:three_prime_UTR | 30.0% | |
| AAGAAACTTCATTTCAGGAA+AGG | + | chr2_1:49330005-49330024 | None:intergenic | 30.0% | |
| ! | TTTTGTGCTATGCATTAAGT+AGG | - | chr2_1:49330024-49330043 | Msa0209840:three_prime_UTR | 30.0% |
| GTTTATTGTGGATGAAATCT+TGG | - | chr2_1:49330090-49330109 | Msa0209840:three_prime_UTR | 30.0% | |
| ! | ATTATTAGCTTCTGGTGTTT+CGG | - | chr2_1:49330199-49330218 | Msa0209840:three_prime_UTR | 30.0% |
| GAAAGAAGATATATAGTTGG+AGG | - | chr2_1:49330232-49330251 | Msa0209840:three_prime_UTR | 30.0% | |
| ! | GAAAATAGCATGATTTGTGA+CGG | - | chr2_1:49330332-49330351 | Msa0209840:three_prime_UTR | 30.0% |
| CGCTAACAAAAGATTCAAAA+GGG | + | chr2_1:49330442-49330461 | None:intergenic | 30.0% | |
| ! | CCTTTTGAATCTTTTGTTAG+CGG | - | chr2_1:49330440-49330459 | Msa0209840:three_prime_UTR | 30.0% |
| TCCTTGTGATGGTTAAATTT+GGG | + | chr2_1:49330489-49330508 | None:intergenic | 30.0% | |
| GATAAGGGAGTTTCTTAAAA+AGG | + | chr2_1:49330585-49330604 | None:intergenic | 30.0% | |
| ! | AAAGTGTTAGCTTCAAACAA+GGG | + | chr2_1:49330648-49330667 | None:intergenic | 30.0% |
| !! | AAAAGTGTTAGCTTCAAACA+AGG | + | chr2_1:49330649-49330668 | None:intergenic | 30.0% |
| TTCAGCAATACTTATTTGTG+AGG | - | chr2_1:49330673-49330692 | Msa0209840:CDS | 30.0% | |
| AATCACTTGTACAAATGAAC+AGG | + | chr2_1:49330788-49330807 | None:intergenic | 30.0% | |
| !! | ATTGGCTTTAGAGAAGTAAA+GGG | - | chr2_1:49330882-49330901 | Msa0209840:CDS | 30.0% |
| AACCAAAATAGGAAAAGTAG+AGG | - | chr2_1:49330924-49330943 | Msa0209840:intron | 30.0% | |
| !! | TTCCTCTACTTTTCCTATTT+TGG | + | chr2_1:49330929-49330948 | None:intergenic | 30.0% |
| !! | TAATAGGAAAAGGTACTACT+TGG | - | chr2_1:49331041-49331060 | Msa0209840:intron | 30.0% |
| !! | AATAGGAAAAGGTACTACTT+GGG | - | chr2_1:49331042-49331061 | Msa0209840:intron | 30.0% |
| ! | TACTTGGGTTGTAATAATGA+TGG | - | chr2_1:49331057-49331076 | Msa0209840:intron | 30.0% |
| !! | ATTGTTTGGTGTTTACAAGT+GGG | - | chr2_1:49331089-49331108 | Msa0209840:intron | 30.0% |
| TTGCATAGAATTGTTCAATG+TGG | + | chr2_1:49331123-49331142 | None:intergenic | 30.0% | |
| ACATTGAACAATTCTATGCA+AGG | - | chr2_1:49331122-49331141 | Msa0209840:CDS | 30.0% | |
| AACTGCTTAAAGAAAGAGGA+AGG | - | chr2_1:49326494-49326513 | Msa0209840:three_prime_UTR | 35.0% | |
| ! | GATGTGTTGATGTAGTGAAT+TGG | - | chr2_1:49326791-49326810 | Msa0209840:three_prime_UTR | 35.0% |
| TAACTCAGGCTTTCAGAATT+TGG | + | chr2_1:49326877-49326896 | None:intergenic | 35.0% | |
| ACCATAACGATATGAAGCAA+CGG | - | chr2_1:49326920-49326939 | Msa0209840:three_prime_UTR | 35.0% | |
| TACAATAATATTCAGGCCTC+AGG | - | chr2_1:49327144-49327163 | Msa0209840:three_prime_UTR | 35.0% | |
| ! | CAACATATTGAGGAGTGTAT+CGG | + | chr2_1:49327170-49327189 | None:intergenic | 35.0% |
| AGAAATATATGGATGAACCG+CGG | + | chr2_1:49327214-49327233 | None:intergenic | 35.0% | |
| ! | GGAGGGTATGTAGAAATATA+TGG | + | chr2_1:49327225-49327244 | None:intergenic | 35.0% |
| !! | CTGTACCATTTGTTGTTGAT+GGG | - | chr2_1:49327253-49327272 | Msa0209840:three_prime_UTR | 35.0% |
| !! | TGTACCATTTGTTGTTGATG+GGG | - | chr2_1:49327254-49327273 | Msa0209840:three_prime_UTR | 35.0% |
| TAAATAGGATCGCCAAAAGA+AGG | + | chr2_1:49327399-49327418 | None:intergenic | 35.0% | |
| ! | TAATCAGCAACCTTTTGTGA+AGG | - | chr2_1:49327428-49327447 | Msa0209840:three_prime_UTR | 35.0% |
| ! | AATCAGCAACCTTTTGTGAA+GGG | - | chr2_1:49327429-49327448 | Msa0209840:three_prime_UTR | 35.0% |
| ATACTGTATCCCTTCACAAA+AGG | + | chr2_1:49327441-49327460 | None:intergenic | 35.0% | |
| ATGATTCACAAAAAAAGGCC+TGG | - | chr2_1:49327517-49327536 | Msa0209840:three_prime_UTR | 35.0% | |
| TTTCATTTCTACCTCCTGAA+AGG | + | chr2_1:49327732-49327751 | None:intergenic | 35.0% | |
| CAAGGAAGTTAACAATCTTG+GGG | + | chr2_1:49327836-49327855 | None:intergenic | 35.0% | |
| GCAAGGAAGTTAACAATCTT+GGG | + | chr2_1:49327837-49327856 | None:intergenic | 35.0% | |
| TGCAAGGAAGTTAACAATCT+TGG | + | chr2_1:49327838-49327857 | None:intergenic | 35.0% | |
| ! | AATCTCATCGATTAGATAGG+TGG | + | chr2_1:49327954-49327973 | None:intergenic | 35.0% |
| ! | ATCGATGAGATTCTTGGTTT+TGG | - | chr2_1:49327962-49327981 | Msa0209840:intron | 35.0% |
| TCGATTTATACAACAGAAGC+TGG | - | chr2_1:49328034-49328053 | Msa0209840:intron | 35.0% | |
| ! | GTCATTAACTTAGAAGCATG+TGG | + | chr2_1:49328107-49328126 | None:intergenic | 35.0% |
| GGGGGCAAACATAAAATTAA+CGG | + | chr2_1:49328188-49328207 | None:intergenic | 35.0% | |
| ATTAGACCAAAACAGATTCG+GGG | + | chr2_1:49328207-49328226 | None:intergenic | 35.0% | |
| ATTTCACCAGTATGCTTGAT+AGG | - | chr2_1:49328408-49328427 | Msa0209840:intron | 35.0% | |
| TCATAACCTATCAAGCATAC+TGG | + | chr2_1:49328417-49328436 | None:intergenic | 35.0% | |
| ! | TCCATTTTCACAACCTAGTT+GGG | - | chr2_1:49328557-49328576 | Msa0209840:intron | 35.0% |
| TAATAAAAGGCAAACTGGGT+CGG | + | chr2_1:49328628-49328647 | None:intergenic | 35.0% | |
| !! | GTGCTGGTTGTTGTAATAAA+AGG | + | chr2_1:49328641-49328660 | None:intergenic | 35.0% |
| ! | TTTTATAAACTCTTCCCCAC+AGG | + | chr2_1:49328663-49328682 | None:intergenic | 35.0% |
| AACTAACCCCTTAAACATAC+AGG | + | chr2_1:49329031-49329050 | None:intergenic | 35.0% | |
| ! | TGTATGTTTAAGGGGTTAGT+TGG | - | chr2_1:49329030-49329049 | Msa0209840:intron | 35.0% |
| !! | GTATGTTTAAGGGGTTAGTT+GGG | - | chr2_1:49329031-49329050 | Msa0209840:intron | 35.0% |
| ! | GATTACCTTTCTGTTGCTTA+TGG | - | chr2_1:49329151-49329170 | Msa0209840:intron | 35.0% |
| ! | TCTGTTGCTTATGGTTATAC+CGG | - | chr2_1:49329160-49329179 | Msa0209840:intron | 35.0% |
| CAAGACGTTGAATTGGAAAA+CGG | + | chr2_1:49329372-49329391 | None:intergenic | 35.0% | |
| !! | GTTTTGTTGCATGCACTTTT+TGG | - | chr2_1:49329464-49329483 | Msa0209840:intron | 35.0% |
| ATTGCATAATTCAGAGTTGG+TGG | - | chr2_1:49329604-49329623 | Msa0209840:three_prime_UTR | 35.0% | |
| !!! | TATTTGTTTTATGTCCGTGC+AGG | - | chr2_1:49329750-49329769 | Msa0209840:intron | 35.0% |
| AGATGTGTTTGTGACCAAAA+CGG | - | chr2_1:49329838-49329857 | Msa0209840:three_prime_UTR | 35.0% | |
| ! | GTATTACATGATTCCCGTTT+TGG | + | chr2_1:49329855-49329874 | None:intergenic | 35.0% |
| TCGATTTCGACTTACAAAGT+TGG | - | chr2_1:49329889-49329908 | Msa0209840:three_prime_UTR | 35.0% | |
| GGGTAACATAATTACCATAC+AGG | + | chr2_1:49330141-49330160 | None:intergenic | 35.0% | |
| GTATGGTAATTATGTTACCC+AGG | - | chr2_1:49330141-49330160 | Msa0209840:three_prime_UTR | 35.0% | |
| ! | TTATTAGCTTCTGGTGTTTC+GGG | - | chr2_1:49330200-49330219 | Msa0209840:three_prime_UTR | 35.0% |
| ACCATAAGCTACAGATAGAA+CGG | + | chr2_1:49330276-49330295 | None:intergenic | 35.0% | |
| CAAAAGATTCAAAAGGGCTT+AGG | + | chr2_1:49330436-49330455 | None:intergenic | 35.0% | |
| CCGCTAACAAAAGATTCAAA+AGG | + | chr2_1:49330443-49330462 | None:intergenic | 35.0% | |
| ATGGTTAAATTTGGGAACAG+AGG | + | chr2_1:49330481-49330500 | None:intergenic | 35.0% | |
| TCCCAAATTTAACCATCACA+AGG | - | chr2_1:49330485-49330504 | Msa0209840:three_prime_UTR | 35.0% | |
| CTCCTTGTGATGGTTAAATT+TGG | + | chr2_1:49330490-49330509 | None:intergenic | 35.0% | |
| TAGTACAAAACTCCTTGTGA+TGG | + | chr2_1:49330500-49330519 | None:intergenic | 35.0% | |
| GGAGTTTCTTAAAAAGGTTC+TGG | + | chr2_1:49330579-49330598 | None:intergenic | 35.0% | |
| !! | GATTGGCTTTAGAGAAGTAA+AGG | - | chr2_1:49330881-49330900 | Msa0209840:CDS | 35.0% |
| TATGACATCATTTGTCCTTG+TGG | - | chr2_1:49331011-49331030 | Msa0209840:intron | 35.0% | |
| ! | GTACCTTTTCCTATTAGTGA+AGG | + | chr2_1:49331037-49331056 | None:intergenic | 35.0% |
| GATGGTTTACAGTGATTGTT+TGG | - | chr2_1:49331075-49331094 | Msa0209840:intron | 35.0% | |
| !! | GATTGTTTGGTGTTTACAAG+TGG | - | chr2_1:49331088-49331107 | Msa0209840:intron | 35.0% |
| ! | TCGACTTGAACAGAAGATGA+AGG | - | chr2_1:49326527-49326546 | Msa0209840:three_prime_UTR | 40.0% |
| TGCTCAAAGAAATGCAGCAT+AGG | - | chr2_1:49326582-49326601 | Msa0209840:three_prime_UTR | 40.0% | |
| CTTCATATCGTTATGGTAGC+TGG | + | chr2_1:49326917-49326936 | None:intergenic | 40.0% | |
| ! | CATACGGACTTCTTTGTTGT+GGG | + | chr2_1:49326954-49326973 | None:intergenic | 40.0% |
| TCATACGGACTTCTTTGTTG+TGG | + | chr2_1:49326955-49326974 | None:intergenic | 40.0% | |
| TTGGCACTAGGAACTTCATA+CGG | + | chr2_1:49326970-49326989 | None:intergenic | 40.0% | |
| ! | ACACTTTGAGAATTGGCACT+AGG | + | chr2_1:49326982-49327001 | None:intergenic | 40.0% |
| ! | AGGGTGTACACTTTGAGAAT+TGG | + | chr2_1:49326989-49327008 | None:intergenic | 40.0% |
| ! | GGCAACTTGCTTGAATTATG+AGG | + | chr2_1:49327036-49327055 | None:intergenic | 40.0% |
| CGATACACTCCTCAATATGT+TGG | - | chr2_1:49327168-49327187 | Msa0209840:three_prime_UTR | 40.0% | |
| TACACTCCTCAATATGTTGG+TGG | - | chr2_1:49327171-49327190 | Msa0209840:three_prime_UTR | 40.0% | |
| GTGTATCCACCAACATATTG+AGG | + | chr2_1:49327180-49327199 | None:intergenic | 40.0% | |
| ATACACTTTAAATCCCACCG+CGG | - | chr2_1:49327194-49327213 | Msa0209840:three_prime_UTR | 40.0% | |
| ATTTCTACATACCCTCCTCA+TGG | - | chr2_1:49327228-49327247 | Msa0209840:three_prime_UTR | 40.0% | |
| !! | GCTGTACCATTTGTTGTTGA+TGG | - | chr2_1:49327252-49327271 | Msa0209840:three_prime_UTR | 40.0% |
| TATTTCGCATGGAGCTGAAA+TGG | - | chr2_1:49327329-49327348 | Msa0209840:three_prime_UTR | 40.0% | |
| TACATGCGAACAAGTACCTT+GGG | - | chr2_1:49327352-49327371 | Msa0209840:three_prime_UTR | 40.0% | |
| AACAAGTACCTTGGGCAATT+TGG | - | chr2_1:49327360-49327379 | Msa0209840:three_prime_UTR | 40.0% | |
| ! | TTTCCTGTACAGCCTTCTTT+TGG | - | chr2_1:49327384-49327403 | Msa0209840:three_prime_UTR | 40.0% |
| GTGAAGGGATACAGTATTTC+TGG | - | chr2_1:49327444-49327463 | Msa0209840:three_prime_UTR | 40.0% | |
| !! | TTCTGGTCATTTTGATCCAC+AGG | - | chr2_1:49327461-49327480 | Msa0209840:three_prime_UTR | 40.0% |
| AACAAATAAGCACCAGTACC+AGG | + | chr2_1:49327538-49327557 | None:intergenic | 40.0% | |
| GCTAGTATGAACTCAAGAAG+AGG | - | chr2_1:49327589-49327608 | Msa0209840:three_prime_UTR | 40.0% | |
| AGTATGAACTCAAGAAGAGG+TGG | - | chr2_1:49327592-49327611 | Msa0209840:three_prime_UTR | 40.0% | |
| !! | CTGCCGTTTCCTAGTTATTT+TGG | - | chr2_1:49327616-49327635 | Msa0209840:three_prime_UTR | 40.0% |
| GGCACATGTCCAAAATAACT+AGG | + | chr2_1:49327628-49327647 | None:intergenic | 40.0% | |
| ! | TTTTGGACATGTGCCAAACA+CGG | - | chr2_1:49327633-49327652 | Msa0209840:three_prime_UTR | 40.0% |
| TACATTACAAAGCCCGTGTT+TGG | + | chr2_1:49327649-49327668 | None:intergenic | 40.0% | |
| ! | GGCTTTGTAATGTACTATCC+AGG | - | chr2_1:49327655-49327674 | Msa0209840:intron | 40.0% |
| TATCCAGACAAAACTGGACT+GGG | + | chr2_1:49327691-49327710 | None:intergenic | 40.0% | |
| ATATCCAGACAAAACTGGAC+TGG | + | chr2_1:49327692-49327711 | None:intergenic | 40.0% | |
| TCTGGATATCCAGACAAAAC+TGG | + | chr2_1:49327697-49327716 | None:intergenic | 40.0% | |
| ! | GTTTTGTCTGGATATCCAGA+TGG | - | chr2_1:49327697-49327716 | Msa0209840:intron | 40.0% |
| TCAATTTCTACCAGAAGCTG+GGG | + | chr2_1:49327764-49327783 | None:intergenic | 40.0% | |
| CTCAATTTCTACCAGAAGCT+GGG | + | chr2_1:49327765-49327784 | None:intergenic | 40.0% | |
| TTCTGGTAGAAATTGAGGCA+TGG | - | chr2_1:49327768-49327787 | Msa0209840:three_prime_UTR | 40.0% | |
| AGAAATTGAGGCATGGTATC+TGG | - | chr2_1:49327775-49327794 | Msa0209840:three_prime_UTR | 40.0% | |
| TGACCACTATCAAAGGATCT+TGG | + | chr2_1:49327810-49327829 | None:intergenic | 40.0% | |
| TTCCTTGCAGAGTTGAAATC+TGG | - | chr2_1:49327849-49327868 | Msa0209840:three_prime_UTR | 40.0% | |
| !! | GAAAGCATTGGTGTTCAAAG+AGG | - | chr2_1:49328076-49328095 | Msa0209840:intron | 40.0% |
| TTAGACCAAAACAGATTCGG+GGG | + | chr2_1:49328206-49328225 | None:intergenic | 40.0% | |
| ! | GTCCATTTTCACAACCTAGT+TGG | - | chr2_1:49328556-49328575 | Msa0209840:intron | 40.0% |
| GTCTGCAACTCTGAACAAAT+TGG | + | chr2_1:49328776-49328795 | None:intergenic | 40.0% | |
| !!! | CTGTTTTTGTTCTGCAGGTA+GGG | - | chr2_1:49329089-49329108 | Msa0209840:intron | 40.0% |
| !!! | GGGTTGAGTTTTTTTTGCCT+CGG | - | chr2_1:49329429-49329448 | Msa0209840:three_prime_UTR | 40.0% |
| AATCTACGCCTCATAGTATC+AGG | + | chr2_1:49329507-49329526 | None:intergenic | 40.0% | |
| GATGTGTTTGTGACCAAAAC+GGG | - | chr2_1:49329839-49329858 | Msa0209840:three_prime_UTR | 40.0% | |
| GGCAAAGCAATAACTATACC+TGG | + | chr2_1:49329984-49330003 | None:intergenic | 40.0% | |
| GGTTCAGTGTCAGTTTATTG+TGG | - | chr2_1:49330078-49330097 | Msa0209840:three_prime_UTR | 40.0% | |
| TCCGTTCTATCTGTAGCTTA+TGG | - | chr2_1:49330272-49330291 | Msa0209840:three_prime_UTR | 40.0% | |
| CCTGTCACAGCAATTTCATA+GGG | + | chr2_1:49330313-49330332 | None:intergenic | 40.0% | |
| TCCTGTCACAGCAATTTCAT+AGG | + | chr2_1:49330314-49330333 | None:intergenic | 40.0% | |
| ATTGTCTTATCCTATACGGC+TGG | - | chr2_1:49330726-49330745 | Msa0209840:CDS | 40.0% | |
| ! | ATACAATGGTGTGCTTTGAG+AGG | - | chr2_1:49330851-49330870 | Msa0209840:CDS | 40.0% |
| !! | CTTTGAGAGGTATTGCAGAT+TGG | - | chr2_1:49330864-49330883 | Msa0209840:CDS | 40.0% |
| CACGTTCAAGCAACCAAAAT+AGG | - | chr2_1:49330913-49330932 | Msa0209840:intron | 40.0% | |
| TGGCCTTCACTAATAGGAAA+AGG | - | chr2_1:49331031-49331050 | Msa0209840:intron | 40.0% | |
| CTATGCAAGGTAGTCAATTG+CGG | - | chr2_1:49331135-49331154 | Msa0209840:CDS | 40.0% | |
| ATTAAAGTTGCAGCCGCAAT+AGG | - | chr2_1:49331230-49331249 | Msa0209840:five_prime_UTR | 40.0% | |
| TGCAGCATAGGAACATCGTT+AGG | - | chr2_1:49326594-49326613 | Msa0209840:three_prime_UTR | 45.0% | |
| GCCGTTGCTTCATATCGTTA+TGG | + | chr2_1:49326924-49326943 | None:intergenic | 45.0% | |
| TAACGATATGAAGCAACGGC+AGG | - | chr2_1:49326924-49326943 | Msa0209840:three_prime_UTR | 45.0% | |
| CCAGCCACTACTTCAGTAAT+CGG | - | chr2_1:49327062-49327081 | Msa0209840:three_prime_UTR | 45.0% | |
| CAGCCACTACTTCAGTAATC+GGG | - | chr2_1:49327063-49327082 | Msa0209840:three_prime_UTR | 45.0% | |
| AGCCACTACTTCAGTAATCG+GGG | - | chr2_1:49327064-49327083 | Msa0209840:three_prime_UTR | 45.0% | |
| AACCCCGATTACTGAAGTAG+TGG | + | chr2_1:49327069-49327088 | None:intergenic | 45.0% | |
| ATATATGGATGAACCGCGGT+GGG | + | chr2_1:49327210-49327229 | None:intergenic | 45.0% | |
| AATATATGGATGAACCGCGG+TGG | + | chr2_1:49327211-49327230 | None:intergenic | 45.0% | |
| ACAAATGGTACAGCACCATG+AGG | + | chr2_1:49327246-49327265 | None:intergenic | 45.0% | |
| GTAGCCCCATCAACAACAAA+TGG | + | chr2_1:49327261-49327280 | None:intergenic | 45.0% | |
| TCCATGCGAAATATTACCCC+CGG | + | chr2_1:49327322-49327341 | None:intergenic | 45.0% | |
| GTACATGCGAACAAGTACCT+TGG | - | chr2_1:49327351-49327370 | Msa0209840:three_prime_UTR | 45.0% | |
| CAGGAAATCCAAATTGCCCA+AGG | + | chr2_1:49327371-49327390 | None:intergenic | 45.0% | |
| CACAAAAAAAGGCCTGGTAC+TGG | - | chr2_1:49327523-49327542 | Msa0209840:three_prime_UTR | 45.0% | |
| TTTGGACATGTGCCAAACAC+GGG | - | chr2_1:49327634-49327653 | Msa0209840:three_prime_UTR | 45.0% | |
| ATAAAACCTTCCCCAGCTTC+TGG | - | chr2_1:49327751-49327770 | Msa0209840:three_prime_UTR | 45.0% | |
| CCTCAATTTCTACCAGAAGC+TGG | + | chr2_1:49327766-49327785 | None:intergenic | 45.0% | |
| CCAGCTTCTGGTAGAAATTG+AGG | - | chr2_1:49327763-49327782 | Msa0209840:three_prime_UTR | 45.0% | |
| AGGCATGGTATCTGGATGTA+TGG | - | chr2_1:49327783-49327802 | Msa0209840:three_prime_UTR | 45.0% | |
| GGTCCAAGATCCTTTGATAG+TGG | - | chr2_1:49327804-49327823 | Msa0209840:three_prime_UTR | 45.0% | |
| TGCCAGATTTCAACTCTGCA+AGG | + | chr2_1:49327854-49327873 | None:intergenic | 45.0% | |
| GCAGAGTTGAAATCTGGCAA+AGG | - | chr2_1:49327855-49327874 | Msa0209840:three_prime_UTR | 45.0% | |
| ACTTCCATGCTGATCAAAGC+TGG | + | chr2_1:49328015-49328034 | None:intergenic | 45.0% | |
| CAACAGAAGCTGGAAAGTTG+TGG | - | chr2_1:49328044-49328063 | Msa0209840:intron | 45.0% | |
| ! | TGGTGCTGAAGAGAAAGCAT+TGG | - | chr2_1:49328064-49328083 | Msa0209840:intron | 45.0% |
| CGGTAACTACGTGATACAGA+AGG | - | chr2_1:49328136-49328155 | Msa0209840:intron | 45.0% | |
| AGTATGGAAACCCTTAGCAG+AGG | - | chr2_1:49328257-49328276 | Msa0209840:intron | 45.0% | |
| GAGGGAACTTGCAGATAAAC+TGG | - | chr2_1:49328279-49328298 | Msa0209840:intron | 45.0% | |
| GAACTTGCAGATAAACTGGC+TGG | - | chr2_1:49328283-49328302 | Msa0209840:intron | 45.0% | |
| CCATACATCTGCAGACTCAA+AGG | + | chr2_1:49328319-49328338 | None:intergenic | 45.0% | |
| CCTTTGAGTCTGCAGATGTA+TGG | - | chr2_1:49328316-49328335 | Msa0209840:intron | 45.0% | |
| TGGCTGTCGTGTAATCCAAA+AGG | - | chr2_1:49328336-49328355 | Msa0209840:intron | 45.0% | |
| GCCCAACTAGGTTGTGAAAA+TGG | + | chr2_1:49328561-49328580 | None:intergenic | 45.0% | |
| ATTACAACAACCAGCACCTG+TGG | - | chr2_1:49328644-49328663 | Msa0209840:intron | 45.0% | |
| TTACAACAACCAGCACCTGT+GGG | - | chr2_1:49328645-49328664 | Msa0209840:intron | 45.0% | |
| !!! | GCTGTTTTTGTTCTGCAGGT+AGG | - | chr2_1:49329088-49329107 | Msa0209840:intron | 45.0% |
| ! | TTTTGTTCTGCAGGTAGGGT+TGG | - | chr2_1:49329093-49329112 | Msa0209840:intron | 45.0% |
| TTTGTTCTGCAGGTAGGGTT+GGG | - | chr2_1:49329094-49329113 | Msa0209840:intron | 45.0% | |
| TCAGTGTGTTGGGTGATTTC+CGG | + | chr2_1:49329120-49329139 | None:intergenic | 45.0% | |
| CAACAGAAAGGTAATCCGAC+AGG | + | chr2_1:49329147-49329166 | None:intergenic | 45.0% | |
| AAACAACAACATGTTGGCGC+TGG | - | chr2_1:49329338-49329357 | Msa0209840:intron | 45.0% | |
| AAACTCAACCCAACCTACAC+AGG | + | chr2_1:49329420-49329439 | None:intergenic | 45.0% | |
| AAAACTGTATACATGGGCCG+AGG | + | chr2_1:49329449-49329468 | None:intergenic | 45.0% | |
| !! | TTGCATGCACTTTTTGGCAG+AGG | - | chr2_1:49329470-49329489 | Msa0209840:intron | 45.0% |
| TGGATGACTCGACAACCATA+AGG | + | chr2_1:49329964-49329983 | None:intergenic | 45.0% | |
| TTATGGTTGTCGAGTCATCC+AGG | - | chr2_1:49329963-49329982 | Msa0209840:three_prime_UTR | 45.0% | |
| ! | GTCAGTTTGTTCTCTTGCTC+AGG | - | chr2_1:49330114-49330133 | Msa0209840:three_prime_UTR | 45.0% |
| ATGCAGCAAGCAACTAACCT+GGG | + | chr2_1:49330161-49330180 | None:intergenic | 45.0% | |
| CACAGCAATTTCATAGGGTG+TGG | + | chr2_1:49330308-49330327 | None:intergenic | 45.0% | |
| CCCTATGAAATTGCTGTGAC+AGG | - | chr2_1:49330310-49330329 | Msa0209840:three_prime_UTR | 45.0% | |
| ! | AGCATGATTTGTGACGGTCT+TGG | - | chr2_1:49330338-49330357 | Msa0209840:three_prime_UTR | 45.0% |
| ! | GTGTTAGCTTCAAACAAGGG+AGG | + | chr2_1:49330645-49330664 | None:intergenic | 45.0% |
| TCCTTGTGGCCTTCACTAAT+AGG | - | chr2_1:49331025-49331044 | Msa0209840:intron | 45.0% | |
| TCCTATTAGTGAAGGCCACA+AGG | + | chr2_1:49331029-49331048 | None:intergenic | 45.0% | |
| TAGTCAATTGCGGCCAATAG+AGG | - | chr2_1:49331145-49331164 | Msa0209840:CDS | 45.0% | |
| CAGCGAAATCTCACGAATGG+CGG | + | chr2_1:49326564-49326583 | None:intergenic | 50.0% | |
| GAGCAGCGAAATCTCACGAA+TGG | + | chr2_1:49326567-49326586 | None:intergenic | 50.0% | |
| AAACTGTTCCCTGCCAACGT+AGG | + | chr2_1:49327013-49327032 | None:intergenic | 50.0% | |
| TGAAGTAGTGGCTGGACATC+AGG | + | chr2_1:49327057-49327076 | None:intergenic | 50.0% | |
| CCGATTACTGAAGTAGTGGC+TGG | + | chr2_1:49327065-49327084 | None:intergenic | 50.0% | |
| AGCAGCTGCTGTCGCATATA+GGG | + | chr2_1:49327100-49327119 | None:intergenic | 50.0% | |
| AAGCAGCTGCTGTCGCATAT+AGG | + | chr2_1:49327101-49327120 | None:intergenic | 50.0% | |
| TGCGACAGCAGCTGCTTATA+TGG | - | chr2_1:49327104-49327123 | Msa0209840:three_prime_UTR | 50.0% | |
| ATGGTACAGCACCATGAGGA+GGG | + | chr2_1:49327242-49327261 | None:intergenic | 50.0% | |
| AATGGTACAGCACCATGAGG+AGG | + | chr2_1:49327243-49327262 | None:intergenic | 50.0% | |
| ! | GTTGAAACCCCTGGTGTTAG+CGG | + | chr2_1:49327300-49327319 | None:intergenic | 50.0% |
| CTAACACCAGGGGTTTCAAC+CGG | - | chr2_1:49327300-49327319 | Msa0209840:three_prime_UTR | 50.0% | |
| TAACACCAGGGGTTTCAACC+GGG | - | chr2_1:49327301-49327320 | Msa0209840:three_prime_UTR | 50.0% | |
| ACCGGGGGTAATATTTCGCA+TGG | - | chr2_1:49327318-49327337 | Msa0209840:three_prime_UTR | 50.0% | |
| TCGCCAAAAGAAGGCTGTAC+AGG | + | chr2_1:49327390-49327409 | None:intergenic | 50.0% | |
| !! | ACACTTGCTATAGGTGCCTG+TGG | + | chr2_1:49327480-49327499 | None:intergenic | 50.0% |
| GGATATCCAGATGGAAGTCC+TGG | - | chr2_1:49327706-49327725 | Msa0209840:intron | 50.0% | |
| TTTCTACCTCCTGAAAGGCC+AGG | + | chr2_1:49327727-49327746 | None:intergenic | 50.0% | |
| TTTCTACCAGAAGCTGGGGA+AGG | + | chr2_1:49327760-49327779 | None:intergenic | 50.0% | |
| GGGGTCTTGACCACTATCAA+AGG | + | chr2_1:49327817-49327836 | None:intergenic | 50.0% | |
| ! | ACCTCCAGCTTTGATCAGCA+TGG | - | chr2_1:49328008-49328027 | Msa0209840:intron | 50.0% |
| TCCATGCTGATCAAAGCTGG+AGG | + | chr2_1:49328012-49328031 | None:intergenic | 50.0% | |
| ! | GTTTGCCCCCGAATCTGTTT+TGG | - | chr2_1:49328198-49328217 | Msa0209840:intron | 50.0% |
| ATGGAAACCCTTAGCAGAGG+AGG | - | chr2_1:49328260-49328279 | Msa0209840:intron | 50.0% | |
| TGGAAACCCTTAGCAGAGGA+GGG | - | chr2_1:49328261-49328280 | Msa0209840:intron | 50.0% | |
| CAAGTTCCCTCCTCTGCTAA+GGG | + | chr2_1:49328270-49328289 | None:intergenic | 50.0% | |
| TACAACAACCAGCACCTGTG+GGG | - | chr2_1:49328646-49328665 | Msa0209840:intron | 50.0% | |
| !!! | GTGGGCTGTTTTTGTTCTGC+AGG | - | chr2_1:49329084-49329103 | Msa0209840:intron | 50.0% |
| GACAGGTCAGTCAGTGTGTT+GGG | + | chr2_1:49329130-49329149 | None:intergenic | 50.0% | |
| ! | CAACACACTGACTGACCTGT+CGG | - | chr2_1:49329129-49329148 | Msa0209840:intron | 50.0% |
| AATAACCTCGAGTGCCTGCA+CGG | + | chr2_1:49329767-49329786 | None:intergenic | 50.0% | |
| TTGCAGAGTTTGTGCAGACG+AGG | - | chr2_1:49330057-49330076 | Msa0209840:three_prime_UTR | 50.0% | |
| TCTCTTGCTCAGGACCTGTA+TGG | - | chr2_1:49330124-49330143 | Msa0209840:three_prime_UTR | 50.0% | |
| GATGCAGCAAGCAACTAACC+TGG | + | chr2_1:49330162-49330181 | None:intergenic | 50.0% | |
| TGCAAGTGTTCCAGCCGTAT+AGG | + | chr2_1:49330739-49330758 | None:intergenic | 50.0% | |
| GCTGGAACACTTGCAGCTTA+AGG | - | chr2_1:49330744-49330763 | Msa0209840:CDS | 50.0% | |
| CGGCAATCAAAACATCGCCA+TGG | + | chr2_1:49331207-49331226 | None:intergenic | 50.0% | |
| GCGGCTGCAACTTTAATACG+CGG | + | chr2_1:49331227-49331246 | None:intergenic | 50.0% | |
| ATCTCACGAATGGCGGTGCT+AGG | + | chr2_1:49326557-49326576 | None:intergenic | 55.0% | |
| AGTGTACACCCTGCCTACGT+TGG | - | chr2_1:49326997-49327016 | Msa0209840:three_prime_UTR | 55.0% | |
| GCTGCTGTCGCATATAGGGT+AGG | + | chr2_1:49327096-49327115 | None:intergenic | 55.0% | |
| ! | TTGAGGAGTGTATCGGCCTG+AGG | + | chr2_1:49327163-49327182 | None:intergenic | 55.0% |
| AGCTATGCTCCGCTAACACC+AGG | - | chr2_1:49327288-49327307 | Msa0209840:three_prime_UTR | 55.0% | |
| GCTATGCTCCGCTAACACCA+GGG | - | chr2_1:49327289-49327308 | Msa0209840:three_prime_UTR | 55.0% | |
| CTATGCTCCGCTAACACCAG+GGG | - | chr2_1:49327290-49327309 | Msa0209840:three_prime_UTR | 55.0% | |
| AACACCAGGGGTTTCAACCG+GGG | - | chr2_1:49327302-49327321 | Msa0209840:three_prime_UTR | 55.0% | |
| ! | GACAAAACTGGACTGGGAGG+TGG | + | chr2_1:49327685-49327704 | None:intergenic | 55.0% |
| ! | CCAGACAAAACTGGACTGGG+AGG | + | chr2_1:49327688-49327707 | None:intergenic | 55.0% |
| !! | CCTCCCAGTCCAGTTTTGTC+TGG | - | chr2_1:49327685-49327704 | Msa0209840:intron | 55.0% |
| GAAAGGCCAGGACTTCCATC+TGG | + | chr2_1:49327715-49327734 | None:intergenic | 55.0% | |
| ! | GATGGAAGTCCTGGCCTTTC+AGG | - | chr2_1:49327715-49327734 | Msa0209840:intron | 55.0% |
| GCAAGTTCCCTCCTCTGCTA+AGG | + | chr2_1:49328271-49328290 | None:intergenic | 55.0% | |
| TCGGAAGTCAGTGCCCAACT+AGG | + | chr2_1:49328573-49328592 | None:intergenic | 55.0% | |
| AAACTCTTCCCCACAGGTGC+TGG | + | chr2_1:49328657-49328676 | None:intergenic | 55.0% | |
| TACCCAGCCCAAGTTGCAGA+TGG | - | chr2_1:49329062-49329081 | Msa0209840:intron | 55.0% | |
| CACCATCTGCAACTTGGGCT+GGG | + | chr2_1:49329067-49329086 | None:intergenic | 55.0% | |
| CAGCCCAAGTTGCAGATGGT+GGG | - | chr2_1:49329066-49329085 | Msa0209840:intron | 55.0% | |
| CAGCCCACCATCTGCAACTT+GGG | + | chr2_1:49329072-49329091 | None:intergenic | 55.0% | |
| ACAGCCCACCATCTGCAACT+TGG | + | chr2_1:49329073-49329092 | None:intergenic | 55.0% | |
| CGACAGGTCAGTCAGTGTGT+TGG | + | chr2_1:49329131-49329150 | None:intergenic | 55.0% | |
| AACCTACACAGGCAGGGGTT+GGG | + | chr2_1:49329409-49329428 | None:intergenic | 55.0% | |
| AACCCCTGCCTGTGTAGGTT+GGG | - | chr2_1:49329409-49329428 | Msa0209840:three_prime_UTR | 55.0% | |
| AACCCAACCTACACAGGCAG+GGG | + | chr2_1:49329414-49329433 | None:intergenic | 55.0% | |
| CAACCCAACCTACACAGGCA+GGG | + | chr2_1:49329415-49329434 | None:intergenic | 55.0% | |
| TCAACCCAACCTACACAGGC+AGG | + | chr2_1:49329416-49329435 | None:intergenic | 55.0% | |
| ! | AGCTCAGCTTGTTCGTGAGC+TGG | - | chr2_1:49329801-49329820 | Msa0209840:three_prime_UTR | 55.0% |
| ! | CAGCTTGTTCGTGAGCTGGA+TGG | - | chr2_1:49329805-49329824 | Msa0209840:three_prime_UTR | 55.0% |
| GTGTTGCAGAGCAACACTGC+TGG | - | chr2_1:49331178-49331197 | Msa0209840:exon | 55.0% | |
| TACACCCTGCCTACGTTGGC+AGG | - | chr2_1:49327001-49327020 | Msa0209840:three_prime_UTR | 60.0% | |
| ACACCCTGCCTACGTTGGCA+GGG | - | chr2_1:49327002-49327021 | Msa0209840:three_prime_UTR | 60.0% | |
| GTTCCCTGCCAACGTAGGCA+GGG | + | chr2_1:49327008-49327027 | None:intergenic | 60.0% | |
| TGTTCCCTGCCAACGTAGGC+AGG | + | chr2_1:49327009-49327028 | None:intergenic | 60.0% | |
| ACACCAGGGGTTTCAACCGG+GGG | - | chr2_1:49327303-49327322 | Msa0209840:three_prime_UTR | 60.0% | |
| TTACCCCCGGTTGAAACCCC+TGG | + | chr2_1:49327309-49327328 | None:intergenic | 60.0% | |
| ! | GGAAGTCCTGGCCTTTCAGG+AGG | - | chr2_1:49327718-49327737 | Msa0209840:intron | 60.0% |
| ! | CTGCAACTTGGGCTGGGTAC+AGG | + | chr2_1:49329061-49329080 | None:intergenic | 60.0% |
| CCACCATCTGCAACTTGGGC+TGG | + | chr2_1:49329068-49329087 | None:intergenic | 60.0% | |
| CCAGCCCAAGTTGCAGATGG+TGG | - | chr2_1:49329065-49329084 | Msa0209840:intron | 60.0% | |
| TTCTGCAGGTAGGGTTGGGC+CGG | - | chr2_1:49329098-49329117 | Msa0209840:intron | 60.0% | |
| AACCCAACCCCTGCCTGTGT+AGG | - | chr2_1:49329404-49329423 | Msa0209840:three_prime_UTR | 60.0% | |
| CAACCTACACAGGCAGGGGT+TGG | + | chr2_1:49329410-49329429 | None:intergenic | 60.0% | |
| CAACCCCTGCCTGTGTAGGT+TGG | - | chr2_1:49329408-49329427 | Msa0209840:three_prime_UTR | 60.0% | |
| TATGTCCGTGCAGGCACTCG+AGG | - | chr2_1:49329759-49329778 | Msa0209840:intron | 60.0% | |
| CACTGCGATCGCGCCTCTAT+TGG | + | chr2_1:49331161-49331180 | None:intergenic | 60.0% | |
| ! | AGCAACACTGCTGGCTGCCA+TGG | - | chr2_1:49331187-49331206 | Msa0209840:five_prime_UTR | 60.0% |
| GGACTGGGAGGTGGTGAACC+TGG | + | chr2_1:49327676-49327695 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 49326468 | 49331260 | 49326468 | ID=Msa0209840;Name=Msa0209840 |
| chr2_1 | mRNA | 49326468 | 49331260 | 49326468 | ID=Msa0209840-mRNA-1;Parent=Msa0209840;Name=Msa0209840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=75|1|1|1|0.4|0.33|6|2510|115 |
| chr2_1 | exon | 49326468 | 49327665 | 49326468 | ID=Msa0209840-mRNA-1:exon:13661;Parent=Msa0209840-mRNA-1 |
| chr2_1 | exon | 49327744 | 49327956 | 49327744 | ID=Msa0209840-mRNA-1:exon:13660;Parent=Msa0209840-mRNA-1 |
| chr2_1 | exon | 49329371 | 49329478 | 49329371 | ID=Msa0209840-mRNA-1:exon:13659;Parent=Msa0209840-mRNA-1 |
| chr2_1 | exon | 49329571 | 49329712 | 49329571 | ID=Msa0209840-mRNA-1:exon:13658;Parent=Msa0209840-mRNA-1 |
| chr2_1 | exon | 49329799 | 49330922 | 49329799 | ID=Msa0209840-mRNA-1:exon:13657;Parent=Msa0209840-mRNA-1 |
| chr2_1 | exon | 49331113 | 49331260 | 49331113 | ID=Msa0209840-mRNA-1:exon:13656;Parent=Msa0209840-mRNA-1 |
| chr2_1 | five_prime_UTR | 49331186 | 49331260 | 49331186 | ID=Msa0209840-mRNA-1:five_prime_utr;Parent=Msa0209840-mRNA-1 |
| chr2_1 | CDS | 49331113 | 49331185 | 49331113 | ID=Msa0209840-mRNA-1:cds;Parent=Msa0209840-mRNA-1 |
| chr2_1 | CDS | 49330648 | 49330922 | 49330648 | ID=Msa0209840-mRNA-1:cds;Parent=Msa0209840-mRNA-1 |
| chr2_1 | three_prime_UTR | 49329799 | 49330647 | 49329799 | ID=Msa0209840-mRNA-1:three_prime_utr;Parent=Msa0209840-mRNA-1 |
| chr2_1 | three_prime_UTR | 49329571 | 49329712 | 49329571 | ID=Msa0209840-mRNA-1:three_prime_utr;Parent=Msa0209840-mRNA-1 |
| chr2_1 | three_prime_UTR | 49329371 | 49329478 | 49329371 | ID=Msa0209840-mRNA-1:three_prime_utr;Parent=Msa0209840-mRNA-1 |
| chr2_1 | three_prime_UTR | 49327744 | 49327956 | 49327744 | ID=Msa0209840-mRNA-1:three_prime_utr;Parent=Msa0209840-mRNA-1 |
| chr2_1 | three_prime_UTR | 49326468 | 49327665 | 49326468 | ID=Msa0209840-mRNA-1:three_prime_utr;Parent=Msa0209840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
