Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902070 | XP_039686411.1 | 85.882 | 85 | 12 | 0 | 31 | 115 | 298 | 382 | 1.50e-37 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902070 | A0A072V7V3 | 85.882 | 85 | 12 | 0 | 31 | 115 | 298 | 382 | 7.17e-38 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0607540 | Msa0902070 | 0.804061 | 2.587801e-49 | -8.615850e-47 |
| Msa0208720 | Msa0902070 | 0.994157 | 5.146325e-205 | -8.615850e-47 |
| Msa0209840 | Msa0902070 | 0.828152 | 1.053863e-54 | -8.615850e-47 |
| Msa0440520 | Msa0902070 | 0.812195 | 4.791376e-51 | -8.615850e-47 |
| Msa0902070 | Msa0909620 | 0.802063 | 6.701295e-49 | -8.615850e-47 |
| Msa0902070 | Msa0976670 | 0.805184 | 1.508990e-49 | -8.615850e-47 |
| Msa0902070 | Msa1452660 | 0.945658 | 2.020690e-104 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0902070 | MtrunA17_Chr2g0298151 | 85.882 | 85 | 12 | 0 | 31 | 115 | 298 | 382 | 1.48e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 172 sgRNAs with CRISPR-Local
Find 572 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGAAGTCCTGGCCTTTC+AGG | 0.160579 | 6_1:-99815827 | Msa0902070:three_prime_UTR |
| GTGAAGGGATACAGTATTTC+TGG | 0.166430 | 6_1:-99816098 | Msa0902070:three_prime_UTR |
| CTGCCGTTTCCTAGTTATTT+TGG | 0.183416 | 6_1:-99815926 | Msa0902070:three_prime_UTR |
| TAACTCAGGCTTTCAGAATT+TGG | 0.199662 | 6_1:+99816668 | None:intergenic |
| CTGACAGCTTGCTGATAATT+TGG | 0.214090 | 6_1:+99810374 | None:intergenic |
| AACAAGTACCTTGGGCAATT+TGG | 0.226451 | 6_1:-99816182 | Msa0902070:three_prime_UTR |
| GCCTGAATATTATTGTAAAA+TGG | 0.227587 | 6_1:+99816404 | None:intergenic |
| GTATTACATGATTCCCGTTT+TGG | 0.240757 | 6_1:+99813691 | None:intergenic |
| TGATTAAATTGCATGTAAAT+AGG | 0.266681 | 6_1:+99816131 | None:intergenic |
| TACAATATGTTCAATTATAT+CGG | 0.284564 | 6_1:+99815647 | None:intergenic |
| GCTGTACCATTTGTTGTTGA+TGG | 0.297035 | 6_1:-99816290 | Msa0902070:three_prime_UTR |
| TGCGACAGCAGCTGCTTATA+TGG | 0.303267 | 6_1:-99816438 | Msa0902070:three_prime_UTR |
| TTGAACATATTGTAGAATTT+AGG | 0.307280 | 6_1:-99815638 | Msa0902070:three_prime_UTR |
| AATTTATCAATGCATCCTTA+TGG | 0.321235 | 6_1:-99813597 | Msa0902070:three_prime_UTR |
| GCAAGGAAGTTAACAATCTT+GGG | 0.342004 | 6_1:+99815708 | None:intergenic |
| TTTCCTGTACAGCCTTCTTT+TGG | 0.343539 | 6_1:-99816158 | Msa0902070:three_prime_UTR |
| TGCAAGGAAGTTAACAATCT+TGG | 0.343904 | 6_1:+99815707 | None:intergenic |
| GTCAGTTTGTTCTCTTGCTC+AGG | 0.347609 | 6_1:-99813429 | Msa0902070:three_prime_UTR |
| ATAAAACCTTCCCCAGCTTC+TGG | 0.356966 | 6_1:-99815791 | Msa0902070:three_prime_UTR |
| GGAGGGTATGTAGAAATATA+TGG | 0.357337 | 6_1:+99816320 | None:intergenic |
| AGAAATTGAGGCATGGTATC+TGG | 0.360418 | 6_1:-99815767 | Msa0902070:three_prime_UTR |
| CCAGCCACTACTTCAGTAAT+CGG | 0.360960 | 6_1:-99816480 | Msa0902070:exon |
| ATTTGAACAACACTTGCTAT+AGG | 0.372017 | 6_1:+99816056 | None:intergenic |
| CTGTACCATTTGTTGTTGAT+GGG | 0.373241 | 6_1:-99816289 | Msa0902070:three_prime_UTR |
| GTTTATTGTGGATGAAATCT+TGG | 0.375343 | 6_1:-99813453 | Msa0902070:three_prime_UTR |
| CTAACACCAGGGGTTTCAAC+CGG | 0.383150 | 6_1:-99816242 | Msa0902070:three_prime_UTR |
| TTCCTTGCAGAGTTGAAATC+TGG | 0.383537 | 6_1:-99815693 | Msa0902070:three_prime_UTR |
| AGCAGCTGCTGTCGCATATA+GGG | 0.389280 | 6_1:+99816445 | None:intergenic |
| AAGTTAATGACTGATGTATT+CGG | 0.389676 | 6_1:-99815426 | Msa0902070:three_prime_UTR |
| TACAATAATATTCAGGCCTC+AGG | 0.390617 | 6_1:-99816398 | Msa0902070:three_prime_UTR |
| AAGCAGCTGCTGTCGCATAT+AGG | 0.391993 | 6_1:+99816444 | None:intergenic |
| AGGGTGTACACTTTGAGAAT+TGG | 0.396528 | 6_1:+99816556 | None:intergenic |
| GGCAACTTGCTTGAATTATG+AGG | 0.396871 | 6_1:+99816509 | None:intergenic |
| TCTGGATATCCAGACAAAAC+TGG | 0.398981 | 6_1:+99815848 | None:intergenic |
| CTTCATATCGTTATGGTAGC+TGG | 0.410037 | 6_1:+99816628 | None:intergenic |
| TACATTACAAAGCCCGTGTT+TGG | 0.415737 | 6_1:+99815896 | None:intergenic |
| TGAAGTAGTGGCTGGACATC+AGG | 0.422179 | 6_1:+99816488 | None:intergenic |
| GAGGGAACTTGCAGATAAAC+TGG | 0.423438 | 6_1:-99815263 | Msa0902070:three_prime_UTR |
| CCTTTGAGTCTGCAGATGTA+TGG | 0.425713 | 6_1:-99815226 | Msa0902070:three_prime_UTR |
| TGTTCCCTGCCAACGTAGGC+AGG | 0.426429 | 6_1:+99816536 | None:intergenic |
| CATACGGACTTCTTTGTTGT+GGG | 0.429886 | 6_1:+99816591 | None:intergenic |
| AGCTCAGCTTGTTCGTGAGC+TGG | 0.434695 | 6_1:-99813742 | Msa0902070:three_prime_UTR |
| TACACCCTGCCTACGTTGGC+AGG | 0.439547 | 6_1:-99816541 | Msa0902070:CDS |
| GTATGGTGACGCCTCTGAAC+GGG | 0.439564 | 6_1:-99810290 | Msa0902070:three_prime_UTR |
| GCAAGTTCCCTCCTCTGCTA+AGG | 0.440828 | 6_1:+99815274 | None:intergenic |
| CAGCCACTACTTCAGTAATC+GGG | 0.449872 | 6_1:-99816479 | Msa0902070:exon |
| TATTTCGCATGGAGCTGAAA+TGG | 0.456375 | 6_1:-99816213 | Msa0902070:three_prime_UTR |
| TCTCTTGCTCAGGACCTGTA+TGG | 0.459100 | 6_1:-99813419 | Msa0902070:three_prime_UTR |
| CCAGCTTCTGGTAGAAATTG+AGG | 0.463746 | 6_1:-99815779 | Msa0902070:three_prime_UTR |
| TAACACCAGGGGTTTCAACC+GGG | 0.464270 | 6_1:-99816241 | Msa0902070:three_prime_UTR |
| CAAGTTCCCTCCTCTGCTAA+GGG | 0.464622 | 6_1:+99815275 | None:intergenic |
| GGATATCCAGATGGAAGTCC+TGG | 0.466778 | 6_1:-99815836 | Msa0902070:three_prime_UTR |
| TGACCACTATCAAAGGATCT+TGG | 0.470659 | 6_1:+99815735 | None:intergenic |
| TCGATTTATACAACAGAAGC+TGG | 0.473377 | 6_1:-99815508 | Msa0902070:three_prime_UTR |
| ATTAAACTGCTTAAAGAAAG+AGG | 0.476485 | 6_1:-99817051 | Msa0902070:five_prime_UTR |
| CCTCAATTTCTACCAGAAGC+TGG | 0.480240 | 6_1:+99815779 | None:intergenic |
| CTCAATTTCTACCAGAAGCT+GGG | 0.482229 | 6_1:+99815780 | None:intergenic |
| GAAAGGCCAGGACTTCCATC+TGG | 0.482564 | 6_1:+99815830 | None:intergenic |
| GCCGTTGCTTCATATCGTTA+TGG | 0.482878 | 6_1:+99816621 | None:intergenic |
| GGACTGGGAGGTGGTGAACC+TGG | 0.483464 | 6_1:+99815869 | None:intergenic |
| GATGTGTTGATGTAGTGAAT+TGG | 0.486051 | 6_1:-99816751 | Msa0902070:intron |
| GTTGAAACCCCTGGTGTTAG+CGG | 0.487624 | 6_1:+99816245 | None:intergenic |
| TCGCCAAAAGAAGGCTGTAC+AGG | 0.491818 | 6_1:+99816155 | None:intergenic |
| GTGGAGAAATGTCTGGAGTA+TGG | 0.492945 | 6_1:-99810307 | Msa0902070:three_prime_UTR |
| GATGTGTTTGTGACCAAAAC+GGG | 0.493665 | 6_1:-99813704 | Msa0902070:three_prime_UTR |
| CAAATTATCAGCAAGCTGTC+AGG | 0.494856 | 6_1:-99810373 | Msa0902070:three_prime_UTR |
| GAATGTTGTGGAGAAATGTC+TGG | 0.499195 | 6_1:-99810314 | Msa0902070:three_prime_UTR |
| CATTCGAAGCAAACTTATGC+TGG | 0.502819 | 6_1:+99810332 | None:intergenic |
| TCGATTTCGACTTACAAAGT+TGG | 0.503724 | 6_1:-99813654 | Msa0902070:three_prime_UTR |
| ATAATTTGGCTCCTTTCTTG+AGG | 0.504220 | 6_1:+99810388 | None:intergenic |
| ATCTCACGAATGGCGGTGCT+AGG | 0.506207 | 6_1:+99816987 | None:intergenic |
| GGCTTTGTAATGTACTATCC+AGG | 0.508549 | 6_1:-99815887 | Msa0902070:three_prime_UTR |
| AGCTATGCTCCGCTAACACC+AGG | 0.511862 | 6_1:-99816254 | Msa0902070:three_prime_UTR |
| TTAATACTATCTGCATTTCG+TGG | 0.512039 | 6_1:-99813630 | Msa0902070:three_prime_UTR |
| AAATTACATGAACAGAGAAC+TGG | 0.512344 | 6_1:-99815977 | Msa0902070:three_prime_UTR |
| GGGTAACATAATTACCATAC+AGG | 0.515883 | 6_1:+99813405 | None:intergenic |
| ATACTGTATCCCTTCACAAA+AGG | 0.515956 | 6_1:+99816104 | None:intergenic |
| TATATCATTACAGCATGTGT+TGG | 0.518674 | 6_1:-99810422 | Msa0902070:intron |
| AGGCATGGTATCTGGATGTA+TGG | 0.520636 | 6_1:-99815759 | Msa0902070:three_prime_UTR |
| TCATACGGACTTCTTTGTTG+TGG | 0.525056 | 6_1:+99816590 | None:intergenic |
| AACAAATAAGCACCAGTACC+AGG | 0.525629 | 6_1:+99816007 | None:intergenic |
| CAGCTTGTTCGTGAGCTGGA+TGG | 0.530950 | 6_1:-99813738 | Msa0902070:three_prime_UTR |
| GTAGCCCCATCAACAACAAA+TGG | 0.531711 | 6_1:+99816284 | None:intergenic |
| TAAATAGGATCGCCAAAAGA+AGG | 0.534846 | 6_1:+99816146 | None:intergenic |
| GGTTCAGTGTCAGTTTATTG+TGG | 0.535825 | 6_1:-99813465 | Msa0902070:three_prime_UTR |
| TTTCTACCTCCTGAAAGGCC+AGG | 0.536903 | 6_1:+99815818 | None:intergenic |
| TACATGCGAACAAGTACCTT+GGG | 0.537124 | 6_1:-99816190 | Msa0902070:three_prime_UTR |
| AATTAACACTTCCCGTTCAG+AGG | 0.538629 | 6_1:+99810279 | None:intergenic |
| TGGATGACTCGACAACCATA+AGG | 0.542908 | 6_1:+99813582 | None:intergenic |
| TACACTCCTCAATATGTTGG+TGG | 0.549567 | 6_1:-99816371 | Msa0902070:three_prime_UTR |
| GTGTATCCACCAACATATTG+AGG | 0.550135 | 6_1:+99816365 | None:intergenic |
| GAAAGCATTGGTGTTCAAAG+AGG | 0.551037 | 6_1:-99815466 | Msa0902070:three_prime_UTR |
| TTTCATTTCTACCTCCTGAA+AGG | 0.551052 | 6_1:+99815813 | None:intergenic |
| TGCCAGATTTCAACTCTGCA+AGG | 0.551259 | 6_1:+99815691 | None:intergenic |
| ATATCCAGACAAAACTGGAC+TGG | 0.551778 | 6_1:+99815853 | None:intergenic |
| GACAAAACTGGACTGGGAGG+TGG | 0.552055 | 6_1:+99815860 | None:intergenic |
| CCGATTACTGAAGTAGTGGC+TGG | 0.553954 | 6_1:+99816480 | None:intergenic |
| ACCTCCAGCTTTGATCAGCA+TGG | 0.555398 | 6_1:-99815534 | Msa0902070:intron |
| TTTGGACATGTGCCAAACAC+GGG | 0.555490 | 6_1:-99815908 | Msa0902070:three_prime_UTR |
| CCATACATCTGCAGACTCAA+AGG | 0.558718 | 6_1:+99815226 | None:intergenic |
| ATGGCTGCGTGTAATCCAAA+AGG | 0.564091 | 6_1:-99815207 | Msa0902070:intron |
| ACATATTGTAGAATTTAGGC+AGG | 0.565482 | 6_1:-99815634 | Msa0902070:intron |
| TAAGTTTGCTTCGAATGTTG+TGG | 0.567052 | 6_1:-99810326 | Msa0902070:three_prime_UTR |
| CGATACACTCCTCAATATGT+TGG | 0.567361 | 6_1:-99816374 | Msa0902070:three_prime_UTR |
| AGATGTGTTTGTGACCAAAA+CGG | 0.568375 | 6_1:-99813705 | Msa0902070:three_prime_UTR |
| TATGTCCGTGCAGGCACTCG+AGG | 0.569397 | 6_1:-99813784 | Msa0902070:intron |
| TTGCAGAGTTTGTGCAGACG+AGG | 0.569430 | 6_1:-99813486 | Msa0902070:intron |
| TGCAGCATAGGAACATCGTT+AGG | 0.570773 | 6_1:-99816947 | Msa0902070:intron |
| ATGGAAACCCTTAGCAGAGG+AGG | 0.571257 | 6_1:-99815282 | Msa0902070:three_prime_UTR |
| TGTCCAAAATAACTAGGAAA+CGG | 0.572570 | 6_1:+99815923 | None:intergenic |
| TTATGGTTGTCGAGTCATCC+AGG | 0.572576 | 6_1:-99813580 | Msa0902070:intron |
| TGTACCATTTGTTGTTGATG+GGG | 0.573810 | 6_1:-99816288 | Msa0902070:three_prime_UTR |
| TTTCTACCAGAAGCTGGGGA+AGG | 0.581309 | 6_1:+99815785 | None:intergenic |
| TCCATGCGAAATATTACCCC+CGG | 0.584110 | 6_1:+99816223 | None:intergenic |
| GGCACATGTCCAAAATAACT+AGG | 0.584700 | 6_1:+99815917 | None:intergenic |
| AGAGAGGTAGACCTCAAGAA+AGG | 0.586564 | 6_1:-99810399 | Msa0902070:three_prime_UTR |
| CAACATATTGAGGAGTGTAT+CGG | 0.587324 | 6_1:+99816375 | None:intergenic |
| GAACTTGCAGATAAACTGGC+TGG | 0.589605 | 6_1:-99815259 | Msa0902070:three_prime_UTR |
| TCGACTTGAACAGAAGATGA+AGG | 0.590689 | 6_1:-99817014 | Msa0902070:exon |
| GTCATTAACTTAGAAGCATG+TGG | 0.592971 | 6_1:+99815438 | None:intergenic |
| GGGGTCTTGACCACTATCAA+AGG | 0.596242 | 6_1:+99815728 | None:intergenic |
| CAACAGAAGCTGGAAAGTTG+TGG | 0.600199 | 6_1:-99815498 | Msa0902070:three_prime_UTR |
| AACTGCTTAAAGAAAGAGGA+AGG | 0.600887 | 6_1:-99817047 | Msa0902070:five_prime_UTR |
| GTACATGCGAACAAGTACCT+TGG | 0.606768 | 6_1:-99816191 | Msa0902070:three_prime_UTR |
| ATATATGGATGAACCGCGGT+GGG | 0.607074 | 6_1:+99816335 | None:intergenic |
| ATTTCTACATACCCTCCTCA+TGG | 0.607245 | 6_1:-99816314 | Msa0902070:three_prime_UTR |
| GTATGGTAATTATGTTACCC+AGG | 0.610531 | 6_1:-99813402 | Msa0902070:intron |
| ACACTTGCTATAGGTGCCTG+TGG | 0.611170 | 6_1:+99816065 | None:intergenic |
| AACACCAGGGGTTTCAACCG+GGG | 0.611630 | 6_1:-99816240 | Msa0902070:three_prime_UTR |
| ACACTTTGAGAATTGGCACT+AGG | 0.614613 | 6_1:+99816563 | None:intergenic |
| ACACCAGGGGTTTCAACCGG+GGG | 0.614681 | 6_1:-99816239 | Msa0902070:three_prime_UTR |
| TTGGCACTAGGAACTTCATA+CGG | 0.614765 | 6_1:+99816575 | None:intergenic |
| AGTGTACACCCTGCCTACGT+TGG | 0.615923 | 6_1:-99816545 | Msa0902070:CDS |
| GTTCCCTGCCAACGTAGGCA+GGG | 0.616500 | 6_1:+99816537 | None:intergenic |
| TATCCAGACAAAACTGGACT+GGG | 0.616787 | 6_1:+99815854 | None:intergenic |
| GAGCAGCGAAATCTCACGAA+TGG | 0.617623 | 6_1:+99816977 | None:intergenic |
| ATTGTAAAATGGATTTACAG+AGG | 0.617692 | 6_1:+99816415 | None:intergenic |
| AGTATGGTGACGCCTCTGAA+CGG | 0.619509 | 6_1:-99810291 | Msa0902070:three_prime_UTR |
| AGTATGAACTCAAGAAGAGG+TGG | 0.619808 | 6_1:-99815950 | Msa0902070:three_prime_UTR |
| TGCTCAAAGAAATGCAGCAT+AGG | 0.620366 | 6_1:-99816959 | Msa0902070:CDS |
| GGTCCAAGATCCTTTGATAG+TGG | 0.623743 | 6_1:-99815738 | Msa0902070:three_prime_UTR |
| CAGCGAAATCTCACGAATGG+CGG | 0.626334 | 6_1:+99816980 | None:intergenic |
| TGGAAACCCTTAGCAGAGGA+GGG | 0.626448 | 6_1:-99815281 | Msa0902070:three_prime_UTR |
| TTGAGGAGTGTATCGGCCTG+AGG | 0.627359 | 6_1:+99816382 | None:intergenic |
| AACCCCGATTACTGAAGTAG+TGG | 0.629591 | 6_1:+99816476 | None:intergenic |
| TTACAGCATGTGTTGGAGAG+AGG | 0.630735 | 6_1:-99810415 | Msa0902070:intron |
| TTCTGGTAGAAATTGAGGCA+TGG | 0.631228 | 6_1:-99815774 | Msa0902070:three_prime_UTR |
| GCAGAGTTGAAATCTGGCAA+AGG | 0.632829 | 6_1:-99815687 | Msa0902070:three_prime_UTR |
| ACACCCTGCCTACGTTGGCA+GGG | 0.639452 | 6_1:-99816540 | Msa0902070:CDS |
| AATGGTACAGCACCATGAGG+AGG | 0.640193 | 6_1:+99816302 | None:intergenic |
| CAAGGAAGTTAACAATCTTG+GGG | 0.640570 | 6_1:+99815709 | None:intergenic |
| TAACGATATGAAGCAACGGC+AGG | 0.641212 | 6_1:-99816618 | Msa0902070:CDS |
| AGCCACTACTTCAGTAATCG+GGG | 0.642698 | 6_1:-99816478 | Msa0902070:exon |
| ACCATAACGATATGAAGCAA+CGG | 0.643877 | 6_1:-99816622 | Msa0902070:CDS |
| GGAAGTCCTGGCCTTTCAGG+AGG | 0.646706 | 6_1:-99815824 | Msa0902070:three_prime_UTR |
| ATGGTACAGCACCATGAGGA+GGG | 0.648488 | 6_1:+99816303 | None:intergenic |
| CAGGAAATCCAAATTGCCCA+AGG | 0.650207 | 6_1:+99816174 | None:intergenic |
| GCTAGTATGAACTCAAGAAG+AGG | 0.653600 | 6_1:-99815953 | Msa0902070:three_prime_UTR |
| CGGTAACTACGTGATACAGA+AGG | 0.658396 | 6_1:-99815406 | Msa0902070:intron |
| TCAATTTCTACCAGAAGCTG+GGG | 0.661184 | 6_1:+99815781 | None:intergenic |
| CTATGCTCCGCTAACACCAG+GGG | 0.662445 | 6_1:-99816252 | Msa0902070:three_prime_UTR |
| AAACTGTTCCCTGCCAACGT+AGG | 0.667412 | 6_1:+99816532 | None:intergenic |
| GCTGCTGTCGCATATAGGGT+AGG | 0.668468 | 6_1:+99816449 | None:intergenic |
| AATATATGGATGAACCGCGG+TGG | 0.673680 | 6_1:+99816334 | None:intergenic |
| CCAGACAAAACTGGACTGGG+AGG | 0.676829 | 6_1:+99815857 | None:intergenic |
| TGGTGCTGAAGAGAAAGCAT+TGG | 0.685406 | 6_1:-99815478 | Msa0902070:three_prime_UTR |
| AGTATGGAAACCCTTAGCAG+AGG | 0.688958 | 6_1:-99815285 | Msa0902070:three_prime_UTR |
| GCTATGCTCCGCTAACACCA+GGG | 0.696961 | 6_1:-99816253 | Msa0902070:three_prime_UTR |
| TGAACGGGAAGTGTTAATTG+CGG | 0.722208 | 6_1:-99810275 | Msa0902070:three_prime_UTR |
| ACAAATGGTACAGCACCATG+AGG | 0.727165 | 6_1:+99816299 | None:intergenic |
| AGAAATATATGGATGAACCG+CGG | 0.765452 | 6_1:+99816331 | None:intergenic |
| ATACACTTTAAATCCCACCG+CGG | 0.835942 | 6_1:-99816348 | Msa0902070:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATTATATACCTTT+TGG | + | chr6_1:99812150-99812169 | None:intergenic | 10.0% |
| !! | AAGTAAAATTATGTATTTAT+TGG | - | chr6_1:99812667-99812686 | Msa0902070:intron | 10.0% |
| !! | AGTAAAATTATGTATTTATT+GGG | - | chr6_1:99812668-99812687 | Msa0902070:intron | 10.0% |
| !!! | AATTTGTGATTTTTATATTA+TGG | + | chr6_1:99812781-99812800 | None:intergenic | 10.0% |
| !! | AAGAAAATAAAGAAAAAATA+AGG | - | chr6_1:99813079-99813098 | Msa0902070:intron | 10.0% |
| !! | AAAAAAATATAAAACAAAAC+AGG | + | chr6_1:99815499-99815518 | None:intergenic | 10.0% |
| !! | TACAATATGTTCAATTATAT+CGG | + | chr6_1:99811695-99811714 | None:intergenic | 15.0% |
| !! | GTAAAATTATGTATTTATTG+GGG | - | chr6_1:99812669-99812688 | Msa0902070:intron | 15.0% |
| !! | TAAAATTATGTATTTATTGG+GGG | - | chr6_1:99812670-99812689 | Msa0902070:intron | 15.0% |
| !!! | ATTTGTTAATAACATTTAAC+CGG | + | chr6_1:99812978-99812997 | None:intergenic | 15.0% |
| !! | AATAGAATTATAAATTTCTC+AGG | + | chr6_1:99813368-99813387 | None:intergenic | 15.0% |
| !! | TTTAATAGAAAACAAAAAAC+AGG | + | chr6_1:99813434-99813453 | None:intergenic | 15.0% |
| !!! | ATAATTTTATTATTAGCTTC+TGG | - | chr6_1:99813987-99814006 | Msa0902070:intron | 15.0% |
| !! | TTCAAAAATAACAAATAAGT+AGG | + | chr6_1:99814498-99814517 | None:intergenic | 15.0% |
| !! | ATAAAATACAAACAGAATAT+GGG | + | chr6_1:99815523-99815542 | None:intergenic | 15.0% |
| !!! | AAGATTAGAAATATTTTCAA+AGG | + | chr6_1:99816192-99816211 | None:intergenic | 15.0% |
| !! | TATTATCTATAAAAAATCGT+TGG | - | chr6_1:99816232-99816251 | Msa0902070:three_prime_UTR | 15.0% |
| !!! | ATGTATTTGTGTTTTATTTA+CGG | - | chr6_1:99816349-99816368 | Msa0902070:three_prime_UTR | 15.0% |
| !!! | GGAATTTTTTGAAAAAATAT+TGG | + | chr6_1:99816483-99816502 | None:intergenic | 15.0% |
| !! | TCAAAAAAAATTAAAAGAGT+AGG | + | chr6_1:99816798-99816817 | None:intergenic | 15.0% |
| !!! | TCCATTTTACAATAATATTC+AGG | - | chr6_1:99810934-99810953 | Msa0902070:intron | 20.0% |
| !! | TGATTAAATTGCATGTAAAT+AGG | + | chr6_1:99811211-99811230 | None:intergenic | 20.0% |
| !! | TTGAACATATTGTAGAATTT+AGG | - | chr6_1:99811701-99811720 | Msa0902070:intron | 20.0% |
| !! | GAATGCTATTGTTTAAATTA+TGG | - | chr6_1:99813110-99813129 | Msa0902070:intron | 20.0% |
| !! | TCTATTAAATCAAGATTGTT+TGG | - | chr6_1:99813445-99813464 | Msa0902070:three_prime_UTR | 20.0% |
| !! | GTTTCTTAAAAAGTAGATAA+GGG | + | chr6_1:99814396-99814415 | None:intergenic | 20.0% |
| !! | AGTTTCTTAAAAAGTAGATA+AGG | + | chr6_1:99814397-99814416 | None:intergenic | 20.0% |
| !!! | TTGAGCTATTAAAAGTATAA+TGG | - | chr6_1:99814623-99814642 | Msa0902070:intron | 20.0% |
| !! | AGGAAACCAATAAAAATTAT+AGG | - | chr6_1:99814740-99814759 | Msa0902070:intron | 20.0% |
| !!! | GTTTGACCTATAATTTTTAT+TGG | + | chr6_1:99814749-99814768 | None:intergenic | 20.0% |
| !!! | CATGATTAGTTATTAGAATT+AGG | - | chr6_1:99814781-99814800 | Msa0902070:intron | 20.0% |
| !! | AACATAAGAAGAAGAAAAAT+AGG | + | chr6_1:99815432-99815451 | None:intergenic | 20.0% |
| !! | ATAGAAAAACTTGAAGAAAT+AGG | + | chr6_1:99815455-99815474 | None:intergenic | 20.0% |
| !! | CATAAAATACAAACAGAATA+TGG | + | chr6_1:99815524-99815543 | None:intergenic | 20.0% |
| !! | ATACAAACAGAACATAAAAA+GGG | + | chr6_1:99815738-99815757 | None:intergenic | 20.0% |
| !! | AATACAAACAGAACATAAAA+AGG | + | chr6_1:99815544-99815563 | None:intergenic | 20.0% |
| !!! | GTTGCTATTTGATAATTTTT+TGG | + | chr6_1:99815921-99815940 | None:intergenic | 20.0% |
| !! | TAGAAACCAACATAAAATAT+AGG | + | chr6_1:99816000-99816019 | None:intergenic | 20.0% |
| !!! | TATTTTATGTTGGTTTCTAA+TGG | - | chr6_1:99816001-99816020 | Msa0902070:three_prime_UTR | 20.0% |
| !! | AAAAATATTGGCATATGAAA+GGG | + | chr6_1:99816471-99816490 | None:intergenic | 20.0% |
| !! | AAAAAATATTGGCATATGAA+AGG | + | chr6_1:99816472-99816491 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAAAAATTCCCTA+AGG | - | chr6_1:99816486-99816505 | Msa0902070:CDS | 20.0% |
| ! | ATTAAACTGCTTAAAGAAAG+AGG | - | chr6_1:99810288-99810307 | Msa0902070:three_prime_UTR | 25.0% |
| !! | TCAATTTTACTTCATAACTC+AGG | + | chr6_1:99810688-99810707 | None:intergenic | 25.0% |
| !! | ATTGTAAAATGGATTTACAG+AGG | + | chr6_1:99810927-99810946 | None:intergenic | 25.0% |
| ! | GCCTGAATATTATTGTAAAA+TGG | + | chr6_1:99810938-99810957 | None:intergenic | 25.0% |
| ! | TCCTTATGATTCACAAAAAA+AGG | - | chr6_1:99811309-99811328 | Msa0902070:intron | 25.0% |
| ! | AAGTTAATGACTGATGTATT+CGG | - | chr6_1:99811913-99811932 | Msa0902070:intron | 25.0% |
| ! | AAATTAGACCAAAACAGATT+CGG | + | chr6_1:99812006-99812025 | None:intergenic | 25.0% |
| ! | AAAACTAAACACATGAGAAA+GGG | + | chr6_1:99812031-99812050 | None:intergenic | 25.0% |
| ! | AAAAACTAAACACATGAGAA+AGG | + | chr6_1:99812032-99812051 | None:intergenic | 25.0% |
| !! | AGATTGTCATTTGAGAAAAT+TGG | + | chr6_1:99812388-99812407 | None:intergenic | 25.0% |
| !!! | TACTTTTATAGTCAAGTTGT+AGG | - | chr6_1:99812535-99812554 | Msa0902070:intron | 25.0% |
| !! | GTCTACATTTAATCTTTTCT+TGG | + | chr6_1:99812714-99812733 | None:intergenic | 25.0% |
| ! | GTTAAATAATATGCTCACTA+TGG | - | chr6_1:99812742-99812761 | Msa0902070:intron | 25.0% |
| ! | TGATAAACCTGTATGTTTAA+GGG | - | chr6_1:99812817-99812836 | Msa0902070:intron | 25.0% |
| !! | TAATATAAGTTGAACTGTTG+TGG | - | chr6_1:99813000-99813019 | Msa0902070:intron | 25.0% |
| ! | ACTTTCTATCATATAATCAG+TGG | - | chr6_1:99813025-99813044 | Msa0902070:intron | 25.0% |
| !!! | CTTTTCAAAAGTGTGATTTT+GGG | + | chr6_1:99813062-99813081 | None:intergenic | 25.0% |
| !!! | TCTTTTCAAAAGTGTGATTT+TGG | + | chr6_1:99813063-99813082 | None:intergenic | 25.0% |
| !!! | TTTTTTTCAAGACGTTGAAT+TGG | + | chr6_1:99813175-99813194 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCTGATACTATG+AGG | - | chr6_1:99813292-99813311 | Msa0902070:intron | 25.0% |
| ! | CAATAGAATACTTGTCTTAT+AGG | + | chr6_1:99813505-99813524 | None:intergenic | 25.0% |
| ! | AATTTATCAATGCATCCTTA+TGG | - | chr6_1:99813742-99813761 | Msa0902070:three_prime_UTR | 25.0% |
| ! | ACAAAAAGAAACTTCATTTC+AGG | + | chr6_1:99813806-99813825 | None:intergenic | 25.0% |
| ! | TGAGAAAGAAGATATATAGT+TGG | - | chr6_1:99814025-99814044 | Msa0902070:intron | 25.0% |
| ! | AAATTCACAGAAAGAAGAAT+TGG | + | chr6_1:99814206-99814225 | None:intergenic | 25.0% |
| ! | AGGTTCTTAAAAAGTAGATA+AGG | + | chr6_1:99814421-99814440 | None:intergenic | 25.0% |
| ! | TGAAATTGTCTTATCCTATA+CGG | - | chr6_1:99814518-99814537 | Msa0902070:intron | 25.0% |
| ! | ATGAACAGGTCTAAATTTAT+TGG | + | chr6_1:99814570-99814589 | None:intergenic | 25.0% |
| !! | ACAAGTGATTTCAATTTTGA+TGG | - | chr6_1:99814594-99814613 | Msa0902070:intron | 25.0% |
| !! | AAAAGTATAATGGCATACAA+TGG | - | chr6_1:99814633-99814652 | Msa0902070:intron | 25.0% |
| ! | ACTAATCATGTATATTCTTG+CGG | + | chr6_1:99814771-99814790 | None:intergenic | 25.0% |
| !!! | CTAATTTTTAAGGAGCAAAA+TGG | + | chr6_1:99815116-99815135 | None:intergenic | 25.0% |
| ! | CTTAAAAATTAGACTTCAGT+GGG | - | chr6_1:99815124-99815143 | Msa0902070:intron | 25.0% |
| ! | TTAAAAATTAGACTTCAGTG+GGG | - | chr6_1:99815125-99815144 | Msa0902070:intron | 25.0% |
| !!! | ATGTTCTGTTTGTATTTTTG+AGG | - | chr6_1:99815548-99815567 | Msa0902070:intron | 25.0% |
| !!! | TGTTCTGTTTGTATTTTTGA+GGG | - | chr6_1:99815549-99815568 | Msa0902070:intron | 25.0% |
| ! | AGCAATAAAAAGTCATAACA+GGG | + | chr6_1:99815816-99815835 | None:intergenic | 25.0% |
| ! | AAGCAATAAAAAGTCATAAC+AGG | + | chr6_1:99815817-99815836 | None:intergenic | 25.0% |
| !! | TGACTACCTATATTTTATGT+TGG | - | chr6_1:99815991-99816010 | Msa0902070:three_prime_UTR | 25.0% |
| !! | GCAAAATATGCTATTTATGA+GGG | + | chr6_1:99816170-99816189 | None:intergenic | 25.0% |
| !! | ATTTGAACAACACTTGCTAT+AGG | + | chr6_1:99811286-99811305 | None:intergenic | 30.0% |
| !!! | GCCTTTTTTTGTGAATCATA+AGG | + | chr6_1:99811313-99811332 | None:intergenic | 30.0% |
| AAATTACATGAACAGAGAAC+TGG | - | chr6_1:99811362-99811381 | Msa0902070:intron | 30.0% | |
| TGTCCAAAATAACTAGGAAA+CGG | + | chr6_1:99811419-99811438 | None:intergenic | 30.0% | |
| ACATATTGTAGAATTTAGGC+AGG | - | chr6_1:99811705-99811724 | Msa0902070:intron | 30.0% | |
| ! | AAGAATCTCATCGATTAGAT+AGG | + | chr6_1:99811754-99811773 | None:intergenic | 30.0% |
| TATCTAATCGATGAGATTCT+TGG | - | chr6_1:99811753-99811772 | Msa0902070:intron | 30.0% | |
| AATTAGACCAAAACAGATTC+GGG | + | chr6_1:99812005-99812024 | None:intergenic | 30.0% | |
| !!! | TGTGTTTAGTTTTTCGAGTA+TGG | - | chr6_1:99812038-99812057 | Msa0902070:intron | 30.0% |
| CTGAATTTCAAATGATCTGA+AGG | + | chr6_1:99812317-99812336 | None:intergenic | 30.0% | |
| GTTGTAATAAAAGGCAAACT+GGG | + | chr6_1:99812428-99812447 | None:intergenic | 30.0% | |
| TGTTGTAATAAAAGGCAAAC+TGG | + | chr6_1:99812429-99812448 | None:intergenic | 30.0% | |
| !! | ATTTATTGGGGGCTTTATTA+TGG | - | chr6_1:99812681-99812700 | Msa0902070:intron | 30.0% |
| CTGATAAACCTGTATGTTTA+AGG | - | chr6_1:99812816-99812835 | Msa0902070:intron | 30.0% | |
| GATAAACCTGTATGTTTAAG+GGG | - | chr6_1:99812818-99812837 | Msa0902070:intron | 30.0% | |
| TATAACCATAAGCAACAGAA+AGG | + | chr6_1:99812955-99812974 | None:intergenic | 30.0% | |
| AAGAAAAAATAAGGCCAACT+TGG | - | chr6_1:99813088-99813107 | Msa0902070:intron | 30.0% | |
| TAAACAATAGCATTCCAAGT+TGG | + | chr6_1:99813105-99813124 | None:intergenic | 30.0% | |
| TATGGAAAACAACAACATGT+TGG | - | chr6_1:99813128-99813147 | Msa0902070:intron | 30.0% | |
| TGCAACAAAACTGTATACAT+GGG | + | chr6_1:99813251-99813270 | None:intergenic | 30.0% | |
| ATGCAACAAAACTGTATACA+TGG | + | chr6_1:99813252-99813271 | None:intergenic | 30.0% | |
| GTAATTGCATAATTCAGAGT+TGG | - | chr6_1:99813397-99813416 | Msa0902070:intron | 30.0% | |
| TTAATACTATCTGCATTTCG+TGG | - | chr6_1:99813709-99813728 | Msa0902070:three_prime_UTR | 30.0% | |
| AAGAAACTTCATTTCAGGAA+AGG | + | chr6_1:99813801-99813820 | None:intergenic | 30.0% | |
| ! | TTTTGTGCTATGCATTAAGT+AGG | - | chr6_1:99813820-99813839 | Msa0902070:intron | 30.0% |
| GTTTATTGTGGATGAAATCT+TGG | - | chr6_1:99813886-99813905 | Msa0902070:intron | 30.0% | |
| ! | ATTATTAGCTTCTGGTGTTT+CGG | - | chr6_1:99813995-99814014 | Msa0902070:intron | 30.0% |
| GAAAGAAGATATATAGTTGG+AGG | - | chr6_1:99814028-99814047 | Msa0902070:intron | 30.0% | |
| ! | GAAAATAGCATGATTTGTGA+CGG | - | chr6_1:99814128-99814147 | Msa0902070:intron | 30.0% |
| CGCTAACAAAAGATTCAAAA+GGG | + | chr6_1:99814238-99814257 | None:intergenic | 30.0% | |
| ! | CCTTTTGAATCTTTTGTTAG+CGG | - | chr6_1:99814236-99814255 | Msa0902070:intron | 30.0% |
| TCCTTGTGATGGTTAAATTT+GGG | + | chr6_1:99814285-99814304 | None:intergenic | 30.0% | |
| GATAAGGGAGTTTCTTAAAA+AGG | + | chr6_1:99814381-99814400 | None:intergenic | 30.0% | |
| ! | AAAGTGTTAGCTTCAAACAA+GGG | + | chr6_1:99814444-99814463 | None:intergenic | 30.0% |
| !! | AAAAGTGTTAGCTTCAAACA+AGG | + | chr6_1:99814445-99814464 | None:intergenic | 30.0% |
| TTCAGCAATACTTATTTGTG+AGG | - | chr6_1:99814469-99814488 | Msa0902070:intron | 30.0% | |
| AATCACTTGTACAAATGAAC+AGG | + | chr6_1:99814584-99814603 | None:intergenic | 30.0% | |
| !! | ATTGGCTTTAGAGAAGTAAA+GGG | - | chr6_1:99814678-99814697 | Msa0902070:intron | 30.0% |
| AACCAAAATAGGAAAAGTAG+AGG | - | chr6_1:99814720-99814739 | Msa0902070:intron | 30.0% | |
| !! | TTCCTCTACTTTTCCTATTT+TGG | + | chr6_1:99814725-99814744 | None:intergenic | 30.0% |
| !! | TAATAGGAAAAGGTACTACT+TGG | - | chr6_1:99814837-99814856 | Msa0902070:intron | 30.0% |
| !! | AATAGGAAAAGGTACTACTT+GGG | - | chr6_1:99814838-99814857 | Msa0902070:intron | 30.0% |
| ! | TACTTGGGTTGTAATAATGA+TGG | - | chr6_1:99814853-99814872 | Msa0902070:intron | 30.0% |
| !! | ATTGTTTGGTGTTTACAAGT+GGG | - | chr6_1:99814885-99814904 | Msa0902070:intron | 30.0% |
| TTGCATAGAATTGTTCAATG+TGG | + | chr6_1:99814919-99814938 | None:intergenic | 30.0% | |
| ACATTGAACAATTCTATGCA+AGG | - | chr6_1:99814918-99814937 | Msa0902070:intron | 30.0% | |
| ! | CCACTGAAGTCTAATTTTTA+AGG | + | chr6_1:99815126-99815145 | None:intergenic | 30.0% |
| CCTTAAAAATTAGACTTCAG+TGG | - | chr6_1:99815123-99815142 | Msa0902070:intron | 30.0% | |
| AAGAAGAAAAATAGGAACAG+AGG | + | chr6_1:99815424-99815443 | None:intergenic | 30.0% | |
| !! | GTTCTGTTTGTATTTTTGAG+GGG | - | chr6_1:99815550-99815569 | Msa0902070:intron | 30.0% |
| TTGTGTAAAAAAACAGGGTA+AGG | - | chr6_1:99815638-99815657 | Msa0902070:three_prime_UTR | 30.0% | |
| AATAAAAAGTCATAACAGGG+GGG | + | chr6_1:99815813-99815832 | None:intergenic | 30.0% | |
| CAATAAAAAGTCATAACAGG+GGG | + | chr6_1:99815814-99815833 | None:intergenic | 30.0% | |
| GCAATAAAAAGTCATAACAG+GGG | + | chr6_1:99815815-99815834 | None:intergenic | 30.0% | |
| CTAAGCAAATAACTCAAAAC+TGG | + | chr6_1:99815855-99815874 | None:intergenic | 30.0% | |
| ! | GAAACCTCTTCATTTTATCT+GGG | - | chr6_1:99816023-99816042 | Msa0902070:three_prime_UTR | 30.0% |
| ! | GGCAAAATATGCTATTTATG+AGG | + | chr6_1:99816171-99816190 | None:intergenic | 30.0% |
| ATCTACATCAAATCAAGCAT+CGG | + | chr6_1:99816392-99816411 | None:intergenic | 30.0% | |
| TGGATGAAATAGAGGAAAAT+GGG | - | chr6_1:99816570-99816589 | Msa0902070:CDS | 30.0% | |
| GAACCAAAAAATTGTATTGG+AGG | - | chr6_1:99816652-99816671 | Msa0902070:CDS | 30.0% | |
| ACACATGCTGTAATGATATA+AGG | + | chr6_1:99816917-99816936 | None:intergenic | 30.0% | |
| TATATCATTACAGCATGTGT+TGG | - | chr6_1:99816917-99816936 | Msa0902070:intron | 30.0% | |
| AACTGCTTAAAGAAAGAGGA+AGG | - | chr6_1:99810292-99810311 | Msa0902070:three_prime_UTR | 35.0% | |
| ! | GATGTGTTGATGTAGTGAAT+TGG | - | chr6_1:99810588-99810607 | Msa0902070:intron | 35.0% |
| TAACTCAGGCTTTCAGAATT+TGG | + | chr6_1:99810674-99810693 | None:intergenic | 35.0% | |
| ACCATAACGATATGAAGCAA+CGG | - | chr6_1:99810717-99810736 | Msa0902070:intron | 35.0% | |
| TACAATAATATTCAGGCCTC+AGG | - | chr6_1:99810941-99810960 | Msa0902070:intron | 35.0% | |
| ! | CAACATATTGAGGAGTGTAT+CGG | + | chr6_1:99810967-99810986 | None:intergenic | 35.0% |
| AGAAATATATGGATGAACCG+CGG | + | chr6_1:99811011-99811030 | None:intergenic | 35.0% | |
| ! | GGAGGGTATGTAGAAATATA+TGG | + | chr6_1:99811022-99811041 | None:intergenic | 35.0% |
| !! | CTGTACCATTTGTTGTTGAT+GGG | - | chr6_1:99811050-99811069 | Msa0902070:intron | 35.0% |
| !! | TGTACCATTTGTTGTTGATG+GGG | - | chr6_1:99811051-99811070 | Msa0902070:intron | 35.0% |
| TAAATAGGATCGCCAAAAGA+AGG | + | chr6_1:99811196-99811215 | None:intergenic | 35.0% | |
| ! | TAATCAGCAACCTTTTGTGA+AGG | - | chr6_1:99811225-99811244 | Msa0902070:intron | 35.0% |
| ! | AATCAGCAACCTTTTGTGAA+GGG | - | chr6_1:99811226-99811245 | Msa0902070:intron | 35.0% |
| ATACTGTATCCCTTCACAAA+AGG | + | chr6_1:99811238-99811257 | None:intergenic | 35.0% | |
| ATGATTCACAAAAAAAGGCC+TGG | - | chr6_1:99811314-99811333 | Msa0902070:intron | 35.0% | |
| TTTCATTTCTACCTCCTGAA+AGG | + | chr6_1:99811529-99811548 | None:intergenic | 35.0% | |
| CAAGGAAGTTAACAATCTTG+GGG | + | chr6_1:99811633-99811652 | None:intergenic | 35.0% | |
| GCAAGGAAGTTAACAATCTT+GGG | + | chr6_1:99811634-99811653 | None:intergenic | 35.0% | |
| TGCAAGGAAGTTAACAATCT+TGG | + | chr6_1:99811635-99811654 | None:intergenic | 35.0% | |
| ! | AATCTCATCGATTAGATAGG+TGG | + | chr6_1:99811751-99811770 | None:intergenic | 35.0% |
| ! | ATCGATGAGATTCTTGGTTT+TGG | - | chr6_1:99811759-99811778 | Msa0902070:intron | 35.0% |
| TCGATTTATACAACAGAAGC+TGG | - | chr6_1:99811831-99811850 | Msa0902070:intron | 35.0% | |
| ! | GTCATTAACTTAGAAGCATG+TGG | + | chr6_1:99811904-99811923 | None:intergenic | 35.0% |
| GGGGGCAAACATAAAATTAA+CGG | + | chr6_1:99811985-99812004 | None:intergenic | 35.0% | |
| ATTAGACCAAAACAGATTCG+GGG | + | chr6_1:99812004-99812023 | None:intergenic | 35.0% | |
| ATTTCACCAGTATGCTTGAT+AGG | - | chr6_1:99812204-99812223 | Msa0902070:intron | 35.0% | |
| TCATAACCTATCAAGCATAC+TGG | + | chr6_1:99812213-99812232 | None:intergenic | 35.0% | |
| ! | TCCATTTTCACAACCTAGTT+GGG | - | chr6_1:99812353-99812372 | Msa0902070:intron | 35.0% |
| TAATAAAAGGCAAACTGGGT+CGG | + | chr6_1:99812424-99812443 | None:intergenic | 35.0% | |
| !! | GTGCTGGTTGTTGTAATAAA+AGG | + | chr6_1:99812437-99812456 | None:intergenic | 35.0% |
| ! | TTTTATAAACTCTTCCCCAC+AGG | + | chr6_1:99812459-99812478 | None:intergenic | 35.0% |
| AACTAACCCCTTAAACATAC+AGG | + | chr6_1:99812827-99812846 | None:intergenic | 35.0% | |
| ! | TGTATGTTTAAGGGGTTAGT+TGG | - | chr6_1:99812826-99812845 | Msa0902070:intron | 35.0% |
| !! | GTATGTTTAAGGGGTTAGTT+GGG | - | chr6_1:99812827-99812846 | Msa0902070:intron | 35.0% |
| ! | GATTACCTTTCTGTTGCTTA+TGG | - | chr6_1:99812947-99812966 | Msa0902070:intron | 35.0% |
| ! | TCTGTTGCTTATGGTTATAC+CGG | - | chr6_1:99812956-99812975 | Msa0902070:intron | 35.0% |
| CAAGACGTTGAATTGGAAAA+CGG | + | chr6_1:99813168-99813187 | None:intergenic | 35.0% | |
| !! | GTTTTGTTGCATGCACTTTT+TGG | - | chr6_1:99813260-99813279 | Msa0902070:intron | 35.0% |
| ATTGCATAATTCAGAGTTGG+TGG | - | chr6_1:99813400-99813419 | Msa0902070:intron | 35.0% | |
| !!! | TATTTGTTTTATGTCCGTGC+AGG | - | chr6_1:99813546-99813565 | Msa0902070:intron | 35.0% |
| AGATGTGTTTGTGACCAAAA+CGG | - | chr6_1:99813634-99813653 | Msa0902070:three_prime_UTR | 35.0% | |
| ! | GTATTACATGATTCCCGTTT+TGG | + | chr6_1:99813651-99813670 | None:intergenic | 35.0% |
| TCGATTTCGACTTACAAAGT+TGG | - | chr6_1:99813685-99813704 | Msa0902070:three_prime_UTR | 35.0% | |
| GGGTAACATAATTACCATAC+AGG | + | chr6_1:99813937-99813956 | None:intergenic | 35.0% | |
| GTATGGTAATTATGTTACCC+AGG | - | chr6_1:99813937-99813956 | Msa0902070:intron | 35.0% | |
| ! | TTATTAGCTTCTGGTGTTTC+GGG | - | chr6_1:99813996-99814015 | Msa0902070:intron | 35.0% |
| ACCATAAGCTACAGATAGAA+CGG | + | chr6_1:99814072-99814091 | None:intergenic | 35.0% | |
| CAAAAGATTCAAAAGGGCTT+AGG | + | chr6_1:99814232-99814251 | None:intergenic | 35.0% | |
| CCGCTAACAAAAGATTCAAA+AGG | + | chr6_1:99814239-99814258 | None:intergenic | 35.0% | |
| ATGGTTAAATTTGGGAACAG+AGG | + | chr6_1:99814277-99814296 | None:intergenic | 35.0% | |
| TCCCAAATTTAACCATCACA+AGG | - | chr6_1:99814281-99814300 | Msa0902070:intron | 35.0% | |
| CTCCTTGTGATGGTTAAATT+TGG | + | chr6_1:99814286-99814305 | None:intergenic | 35.0% | |
| TAGTACAAAACTCCTTGTGA+TGG | + | chr6_1:99814296-99814315 | None:intergenic | 35.0% | |
| GGAGTTTCTTAAAAAGGTTC+TGG | + | chr6_1:99814375-99814394 | None:intergenic | 35.0% | |
| !! | GATTGGCTTTAGAGAAGTAA+AGG | - | chr6_1:99814677-99814696 | Msa0902070:intron | 35.0% |
| TATGACATCATTTGTCCTTG+TGG | - | chr6_1:99814807-99814826 | Msa0902070:intron | 35.0% | |
| ! | GTACCTTTTCCTATTAGTGA+AGG | + | chr6_1:99814833-99814852 | None:intergenic | 35.0% |
| GATGGTTTACAGTGATTGTT+TGG | - | chr6_1:99814871-99814890 | Msa0902070:intron | 35.0% | |
| !! | GATTGTTTGGTGTTTACAAG+TGG | - | chr6_1:99814884-99814903 | Msa0902070:intron | 35.0% |
| AAACTGGAAAAAACAGAACC+TGG | + | chr6_1:99815337-99815356 | None:intergenic | 35.0% | |
| AACAGGAATAGAAGAACAGT+GGG | + | chr6_1:99815482-99815501 | None:intergenic | 35.0% | |
| AAACAGGAATAGAAGAACAG+TGG | + | chr6_1:99815483-99815502 | None:intergenic | 35.0% | |
| AAAGTTGTTGTCATGTGACT+CGG | - | chr6_1:99815592-99815611 | Msa0902070:intron | 35.0% | |
| AGCCTCTTGTGTAAAAAAAC+AGG | - | chr6_1:99815632-99815651 | Msa0902070:intron | 35.0% | |
| GCCTCTTGTGTAAAAAAACA+GGG | - | chr6_1:99815633-99815652 | Msa0902070:intron | 35.0% | |
| !!! | ACCCTGTTTTTTTACACAAG+AGG | + | chr6_1:99815637-99815656 | None:intergenic | 35.0% |
| AAAACAGAGAGAAGGTTGAA+GGG | + | chr6_1:99815784-99815803 | None:intergenic | 35.0% | |
| TAAAACAGAGAGAAGGTTGA+AGG | + | chr6_1:99815785-99815804 | None:intergenic | 35.0% | |
| GGAAAGATAAAACAGAGAGA+AGG | + | chr6_1:99815792-99815811 | None:intergenic | 35.0% | |
| ! | GGAAACCTCTTCATTTTATC+TGG | - | chr6_1:99816022-99816041 | Msa0902070:three_prime_UTR | 35.0% |
| ! | TCTTCATTTTATCTGGGCTT+GGG | - | chr6_1:99816029-99816048 | Msa0902070:three_prime_UTR | 35.0% |
| ! | TTTTTCGTTGCATGGCTTAA+GGG | - | chr6_1:99816279-99816298 | Msa0902070:three_prime_UTR | 35.0% |
| ACTCTCAAATGAAAATGCCA+GGG | + | chr6_1:99816329-99816348 | None:intergenic | 35.0% | |
| TACTCTCAAATGAAAATGCC+AGG | + | chr6_1:99816330-99816349 | None:intergenic | 35.0% | |
| TCTACATCAAATCAAGCATC+GGG | + | chr6_1:99816391-99816410 | None:intergenic | 35.0% | |
| !!! | ACTACTTTTGACTTTGACTC+TGG | - | chr6_1:99816426-99816445 | Msa0902070:three_prime_UTR | 35.0% |
| GTGGATGAAATAGAGGAAAA+TGG | - | chr6_1:99816569-99816588 | Msa0902070:CDS | 35.0% | |
| ATGAAATAGAGGAAAATGGG+AGG | - | chr6_1:99816573-99816592 | Msa0902070:CDS | 35.0% | |
| TGAAATAGAGGAAAATGGGA+GGG | - | chr6_1:99816574-99816593 | Msa0902070:CDS | 35.0% | |
| AATACTAAACCCTCCTCATT+TGG | - | chr6_1:99816627-99816646 | Msa0902070:CDS | 35.0% | |
| ATACTAAACCCTCCTCATTT+GGG | - | chr6_1:99816628-99816647 | Msa0902070:CDS | 35.0% | |
| GGGGAACCAAAAAATTGTAT+TGG | - | chr6_1:99816649-99816668 | Msa0902070:CDS | 35.0% | |
| !!! | CCTCCTCCAATACAATTTTT+TGG | + | chr6_1:99816658-99816677 | None:intergenic | 35.0% |
| CCAAAAAATTGTATTGGAGG+AGG | - | chr6_1:99816655-99816674 | Msa0902070:CDS | 35.0% | |
| ! | ATTGTATTGGAGGAGGTTTT+TGG | - | chr6_1:99816662-99816681 | Msa0902070:CDS | 35.0% |
| ! | TTGTATTGGAGGAGGTTTTT+GGG | - | chr6_1:99816663-99816682 | Msa0902070:CDS | 35.0% |
| GTGGAAAATATGACGAGAAA+TGG | + | chr6_1:99816830-99816849 | None:intergenic | 35.0% | |
| ! | TAAGGAAAGCACAGTTACTT+AGG | + | chr6_1:99816899-99816918 | None:intergenic | 35.0% |
| ! | ATAATTTGGCTCCTTTCTTG+AGG | + | chr6_1:99816954-99816973 | None:intergenic | 35.0% |
| ! | TAAGTTTGCTTCGAATGTTG+TGG | - | chr6_1:99817013-99817032 | Msa0902070:exon | 35.0% |
| ! | TCGACTTGAACAGAAGATGA+AGG | - | chr6_1:99810325-99810344 | Msa0902070:three_prime_UTR | 40.0% |
| TGCTCAAAGAAATGCAGCAT+AGG | - | chr6_1:99810380-99810399 | Msa0902070:three_prime_UTR | 40.0% | |
| CTTCATATCGTTATGGTAGC+TGG | + | chr6_1:99810714-99810733 | None:intergenic | 40.0% | |
| ! | CATACGGACTTCTTTGTTGT+GGG | + | chr6_1:99810751-99810770 | None:intergenic | 40.0% |
| TCATACGGACTTCTTTGTTG+TGG | + | chr6_1:99810752-99810771 | None:intergenic | 40.0% | |
| TTGGCACTAGGAACTTCATA+CGG | + | chr6_1:99810767-99810786 | None:intergenic | 40.0% | |
| ! | ACACTTTGAGAATTGGCACT+AGG | + | chr6_1:99810779-99810798 | None:intergenic | 40.0% |
| ! | AGGGTGTACACTTTGAGAAT+TGG | + | chr6_1:99810786-99810805 | None:intergenic | 40.0% |
| ! | GGCAACTTGCTTGAATTATG+AGG | + | chr6_1:99810833-99810852 | None:intergenic | 40.0% |
| CGATACACTCCTCAATATGT+TGG | - | chr6_1:99810965-99810984 | Msa0902070:intron | 40.0% | |
| TACACTCCTCAATATGTTGG+TGG | - | chr6_1:99810968-99810987 | Msa0902070:intron | 40.0% | |
| GTGTATCCACCAACATATTG+AGG | + | chr6_1:99810977-99810996 | None:intergenic | 40.0% | |
| ATACACTTTAAATCCCACCG+CGG | - | chr6_1:99810991-99811010 | Msa0902070:intron | 40.0% | |
| ATTTCTACATACCCTCCTCA+TGG | - | chr6_1:99811025-99811044 | Msa0902070:intron | 40.0% | |
| !! | GCTGTACCATTTGTTGTTGA+TGG | - | chr6_1:99811049-99811068 | Msa0902070:intron | 40.0% |
| TATTTCGCATGGAGCTGAAA+TGG | - | chr6_1:99811126-99811145 | Msa0902070:intron | 40.0% | |
| TACATGCGAACAAGTACCTT+GGG | - | chr6_1:99811149-99811168 | Msa0902070:intron | 40.0% | |
| AACAAGTACCTTGGGCAATT+TGG | - | chr6_1:99811157-99811176 | Msa0902070:intron | 40.0% | |
| ! | TTTCCTGTACAGCCTTCTTT+TGG | - | chr6_1:99811181-99811200 | Msa0902070:intron | 40.0% |
| GTGAAGGGATACAGTATTTC+TGG | - | chr6_1:99811241-99811260 | Msa0902070:intron | 40.0% | |
| !! | TTCTGGTCATTTTGATCCAC+AGG | - | chr6_1:99811258-99811277 | Msa0902070:intron | 40.0% |
| AACAAATAAGCACCAGTACC+AGG | + | chr6_1:99811335-99811354 | None:intergenic | 40.0% | |
| GCTAGTATGAACTCAAGAAG+AGG | - | chr6_1:99811386-99811405 | Msa0902070:intron | 40.0% | |
| AGTATGAACTCAAGAAGAGG+TGG | - | chr6_1:99811389-99811408 | Msa0902070:intron | 40.0% | |
| !! | CTGCCGTTTCCTAGTTATTT+TGG | - | chr6_1:99811413-99811432 | Msa0902070:intron | 40.0% |
| GGCACATGTCCAAAATAACT+AGG | + | chr6_1:99811425-99811444 | None:intergenic | 40.0% | |
| ! | TTTTGGACATGTGCCAAACA+CGG | - | chr6_1:99811430-99811449 | Msa0902070:intron | 40.0% |
| TACATTACAAAGCCCGTGTT+TGG | + | chr6_1:99811446-99811465 | None:intergenic | 40.0% | |
| ! | GGCTTTGTAATGTACTATCC+AGG | - | chr6_1:99811452-99811471 | Msa0902070:intron | 40.0% |
| TATCCAGACAAAACTGGACT+GGG | + | chr6_1:99811488-99811507 | None:intergenic | 40.0% | |
| ATATCCAGACAAAACTGGAC+TGG | + | chr6_1:99811489-99811508 | None:intergenic | 40.0% | |
| TCTGGATATCCAGACAAAAC+TGG | + | chr6_1:99811494-99811513 | None:intergenic | 40.0% | |
| ! | GTTTTGTCTGGATATCCAGA+TGG | - | chr6_1:99811494-99811513 | Msa0902070:intron | 40.0% |
| TCAATTTCTACCAGAAGCTG+GGG | + | chr6_1:99811561-99811580 | None:intergenic | 40.0% | |
| CTCAATTTCTACCAGAAGCT+GGG | + | chr6_1:99811562-99811581 | None:intergenic | 40.0% | |
| TTCTGGTAGAAATTGAGGCA+TGG | - | chr6_1:99811565-99811584 | Msa0902070:intron | 40.0% | |
| AGAAATTGAGGCATGGTATC+TGG | - | chr6_1:99811572-99811591 | Msa0902070:intron | 40.0% | |
| TGACCACTATCAAAGGATCT+TGG | + | chr6_1:99811607-99811626 | None:intergenic | 40.0% | |
| TTCCTTGCAGAGTTGAAATC+TGG | - | chr6_1:99811646-99811665 | Msa0902070:intron | 40.0% | |
| !! | GAAAGCATTGGTGTTCAAAG+AGG | - | chr6_1:99811873-99811892 | Msa0902070:intron | 40.0% |
| TTAGACCAAAACAGATTCGG+GGG | + | chr6_1:99812003-99812022 | None:intergenic | 40.0% | |
| ! | GTCCATTTTCACAACCTAGT+TGG | - | chr6_1:99812352-99812371 | Msa0902070:intron | 40.0% |
| GTCTGCAACTCTGAACAAAT+TGG | + | chr6_1:99812572-99812591 | None:intergenic | 40.0% | |
| !!! | CTGTTTTTGTTCTGCAGGTA+GGG | - | chr6_1:99812885-99812904 | Msa0902070:intron | 40.0% |
| !!! | GGGTTGAGTTTTTTTTGCCT+CGG | - | chr6_1:99813225-99813244 | Msa0902070:intron | 40.0% |
| AATCTACGCCTCATAGTATC+AGG | + | chr6_1:99813303-99813322 | None:intergenic | 40.0% | |
| GATGTGTTTGTGACCAAAAC+GGG | - | chr6_1:99813635-99813654 | Msa0902070:three_prime_UTR | 40.0% | |
| GGCAAAGCAATAACTATACC+TGG | + | chr6_1:99813780-99813799 | None:intergenic | 40.0% | |
| GGTTCAGTGTCAGTTTATTG+TGG | - | chr6_1:99813874-99813893 | Msa0902070:intron | 40.0% | |
| TCCGTTCTATCTGTAGCTTA+TGG | - | chr6_1:99814068-99814087 | Msa0902070:intron | 40.0% | |
| CCTGTCACAGCAATTTCATA+GGG | + | chr6_1:99814109-99814128 | None:intergenic | 40.0% | |
| TCCTGTCACAGCAATTTCAT+AGG | + | chr6_1:99814110-99814129 | None:intergenic | 40.0% | |
| ATTGTCTTATCCTATACGGC+TGG | - | chr6_1:99814522-99814541 | Msa0902070:intron | 40.0% | |
| ! | ATACAATGGTGTGCTTTGAG+AGG | - | chr6_1:99814647-99814666 | Msa0902070:intron | 40.0% |
| !! | CTTTGAGAGGTATTGCAGAT+TGG | - | chr6_1:99814660-99814679 | Msa0902070:intron | 40.0% |
| CACGTTCAAGCAACCAAAAT+AGG | - | chr6_1:99814709-99814728 | Msa0902070:intron | 40.0% | |
| TGGCCTTCACTAATAGGAAA+AGG | - | chr6_1:99814827-99814846 | Msa0902070:intron | 40.0% | |
| CTATGCAAGGTAGTCAATTG+CGG | - | chr6_1:99814931-99814950 | Msa0902070:intron | 40.0% | |
| ATTAAAGTTGCAGCCGCAAT+AGG | - | chr6_1:99815026-99815045 | Msa0902070:intron | 40.0% | |
| ! | GCAGTTAGTTTGAAGGAAGA+AGG | + | chr6_1:99815210-99815229 | None:intergenic | 40.0% |
| TTGGAATAGAGAAACAGAGC+AGG | + | chr6_1:99815388-99815407 | None:intergenic | 40.0% | |
| CAGAGGAAAACTGTAGGATT+TGG | + | chr6_1:99815407-99815426 | None:intergenic | 40.0% | |
| TAGGAACAGAGGAAAACTGT+AGG | + | chr6_1:99815413-99815432 | None:intergenic | 40.0% | |
| ACAGGAATAGAAGAACAGTG+GGG | + | chr6_1:99815481-99815500 | None:intergenic | 40.0% | |
| !! | GTATTTTTGAGGGGTAACCT+TGG | - | chr6_1:99815559-99815578 | Msa0902070:intron | 40.0% |
| AAGTTGTTGTCATGTGACTC+GGG | - | chr6_1:99815593-99815612 | Msa0902070:intron | 40.0% | |
| CACACAATACACCAAATGGT+GGG | - | chr6_1:99815664-99815683 | Msa0902070:three_prime_UTR | 40.0% | |
| AGAACATAAAAAGGGCAACC+CGG | + | chr6_1:99815730-99815749 | None:intergenic | 40.0% | |
| AGGGGAAAATAGTGAAAGAG+AGG | + | chr6_1:99815765-99815784 | None:intergenic | 40.0% | |
| AAACAGAGAGAAGGTTGAAG+GGG | + | chr6_1:99815783-99815802 | None:intergenic | 40.0% | |
| CAAGCCCAGATAAAATGAAG+AGG | + | chr6_1:99816030-99816049 | None:intergenic | 40.0% | |
| ! | CTCTTCATTTTATCTGGGCT+TGG | - | chr6_1:99816028-99816047 | Msa0902070:three_prime_UTR | 40.0% |
| ! | CTTCATTTTATCTGGGCTTG+GGG | - | chr6_1:99816030-99816049 | Msa0902070:three_prime_UTR | 40.0% |
| ! | TGCTATTTATGAGGGTGAGA+GGG | + | chr6_1:99816162-99816181 | None:intergenic | 40.0% |
| ! | ATGCTATTTATGAGGGTGAG+AGG | + | chr6_1:99816163-99816182 | None:intergenic | 40.0% |
| ! | AGTCAGAGTTTTTCGTTGCA+TGG | - | chr6_1:99816271-99816290 | Msa0902070:three_prime_UTR | 40.0% |
| ! | GTTTTTCGTTGCATGGCTTA+AGG | - | chr6_1:99816278-99816297 | Msa0902070:three_prime_UTR | 40.0% |
| ! | TTTTCGTTGCATGGCTTAAG+GGG | - | chr6_1:99816280-99816299 | Msa0902070:three_prime_UTR | 40.0% |
| ATGAAAATGCCAGGGAAAGA+GGG | + | chr6_1:99816321-99816340 | None:intergenic | 40.0% | |
| AATGAAAATGCCAGGGAAAG+AGG | + | chr6_1:99816322-99816341 | None:intergenic | 40.0% | |
| AACTCGCAAACAAAGCCTTA+GGG | + | chr6_1:99816504-99816523 | None:intergenic | 40.0% | |
| AAACTCGCAAACAAAGCCTT+AGG | + | chr6_1:99816505-99816524 | None:intergenic | 40.0% | |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr6_1:99816504-99816523 | Msa0902070:CDS | 40.0% |
| GGAAAAAAGGAATGAGCAAG+TGG | - | chr6_1:99816550-99816569 | Msa0902070:CDS | 40.0% | |
| TGAGCAAGTGGATGAAATAG+AGG | - | chr6_1:99816562-99816581 | Msa0902070:CDS | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | - | chr6_1:99816575-99816594 | Msa0902070:CDS | 40.0% | |
| TACTAAACCCTCCTCATTTG+GGG | - | chr6_1:99816629-99816648 | Msa0902070:CDS | 40.0% | |
| !!! | TTTTTTGGTTCCCCCAAATG+AGG | + | chr6_1:99816643-99816662 | None:intergenic | 40.0% |
| ! | TGTATTGGAGGAGGTTTTTG+GGG | - | chr6_1:99816664-99816683 | Msa0902070:CDS | 40.0% |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr6_1:99816881-99816900 | None:intergenic | 40.0% |
| !! | CTGACAGCTTGCTGATAATT+TGG | + | chr6_1:99816968-99816987 | None:intergenic | 40.0% |
| CAAATTATCAGCAAGCTGTC+AGG | - | chr6_1:99816966-99816985 | Msa0902070:CDS | 40.0% | |
| CATTCGAAGCAAACTTATGC+TGG | + | chr6_1:99817010-99817029 | None:intergenic | 40.0% | |
| GAATGTTGTGGAGAAATGTC+TGG | - | chr6_1:99817025-99817044 | Msa0902070:five_prime_UTR | 40.0% | |
| AATTAACACTTCCCGTTCAG+AGG | + | chr6_1:99817063-99817082 | None:intergenic | 40.0% | |
| !! | TGAACGGGAAGTGTTAATTG+CGG | - | chr6_1:99817064-99817083 | Msa0902070:five_prime_UTR | 40.0% |
| TGCAGCATAGGAACATCGTT+AGG | - | chr6_1:99810392-99810411 | Msa0902070:three_prime_UTR | 45.0% | |
| GCCGTTGCTTCATATCGTTA+TGG | + | chr6_1:99810721-99810740 | None:intergenic | 45.0% | |
| TAACGATATGAAGCAACGGC+AGG | - | chr6_1:99810721-99810740 | Msa0902070:intron | 45.0% | |
| CCAGCCACTACTTCAGTAAT+CGG | - | chr6_1:99810859-99810878 | Msa0902070:intron | 45.0% | |
| CAGCCACTACTTCAGTAATC+GGG | - | chr6_1:99810860-99810879 | Msa0902070:intron | 45.0% | |
| AGCCACTACTTCAGTAATCG+GGG | - | chr6_1:99810861-99810880 | Msa0902070:intron | 45.0% | |
| AACCCCGATTACTGAAGTAG+TGG | + | chr6_1:99810866-99810885 | None:intergenic | 45.0% | |
| ATATATGGATGAACCGCGGT+GGG | + | chr6_1:99811007-99811026 | None:intergenic | 45.0% | |
| AATATATGGATGAACCGCGG+TGG | + | chr6_1:99811008-99811027 | None:intergenic | 45.0% | |
| ACAAATGGTACAGCACCATG+AGG | + | chr6_1:99811043-99811062 | None:intergenic | 45.0% | |
| GTAGCCCCATCAACAACAAA+TGG | + | chr6_1:99811058-99811077 | None:intergenic | 45.0% | |
| TCCATGCGAAATATTACCCC+CGG | + | chr6_1:99811119-99811138 | None:intergenic | 45.0% | |
| GTACATGCGAACAAGTACCT+TGG | - | chr6_1:99811148-99811167 | Msa0902070:intron | 45.0% | |
| CAGGAAATCCAAATTGCCCA+AGG | + | chr6_1:99811168-99811187 | None:intergenic | 45.0% | |
| CACAAAAAAAGGCCTGGTAC+TGG | - | chr6_1:99811320-99811339 | Msa0902070:intron | 45.0% | |
| TTTGGACATGTGCCAAACAC+GGG | - | chr6_1:99811431-99811450 | Msa0902070:intron | 45.0% | |
| ATAAAACCTTCCCCAGCTTC+TGG | - | chr6_1:99811548-99811567 | Msa0902070:intron | 45.0% | |
| CCTCAATTTCTACCAGAAGC+TGG | + | chr6_1:99811563-99811582 | None:intergenic | 45.0% | |
| CCAGCTTCTGGTAGAAATTG+AGG | - | chr6_1:99811560-99811579 | Msa0902070:intron | 45.0% | |
| AGGCATGGTATCTGGATGTA+TGG | - | chr6_1:99811580-99811599 | Msa0902070:intron | 45.0% | |
| GGTCCAAGATCCTTTGATAG+TGG | - | chr6_1:99811601-99811620 | Msa0902070:intron | 45.0% | |
| TGCCAGATTTCAACTCTGCA+AGG | + | chr6_1:99811651-99811670 | None:intergenic | 45.0% | |
| GCAGAGTTGAAATCTGGCAA+AGG | - | chr6_1:99811652-99811671 | Msa0902070:intron | 45.0% | |
| ACTTCCATGCTGATCAAAGC+TGG | + | chr6_1:99811812-99811831 | None:intergenic | 45.0% | |
| CAACAGAAGCTGGAAAGTTG+TGG | - | chr6_1:99811841-99811860 | Msa0902070:intron | 45.0% | |
| ! | TGGTGCTGAAGAGAAAGCAT+TGG | - | chr6_1:99811861-99811880 | Msa0902070:intron | 45.0% |
| CGGTAACTACGTGATACAGA+AGG | - | chr6_1:99811933-99811952 | Msa0902070:intron | 45.0% | |
| AGTATGGAAACCCTTAGCAG+AGG | - | chr6_1:99812054-99812073 | Msa0902070:intron | 45.0% | |
| GAGGGAACTTGCAGATAAAC+TGG | - | chr6_1:99812076-99812095 | Msa0902070:intron | 45.0% | |
| GAACTTGCAGATAAACTGGC+TGG | - | chr6_1:99812080-99812099 | Msa0902070:intron | 45.0% | |
| CCATACATCTGCAGACTCAA+AGG | + | chr6_1:99812116-99812135 | None:intergenic | 45.0% | |
| CCTTTGAGTCTGCAGATGTA+TGG | - | chr6_1:99812113-99812132 | Msa0902070:intron | 45.0% | |
| ATGGCTGCGTGTAATCCAAA+AGG | - | chr6_1:99812132-99812151 | Msa0902070:intron | 45.0% | |
| GCCCAACTAGGTTGTGAAAA+TGG | + | chr6_1:99812357-99812376 | None:intergenic | 45.0% | |
| ATTACAACAACCAGCACCTG+TGG | - | chr6_1:99812440-99812459 | Msa0902070:intron | 45.0% | |
| TTACAACAACCAGCACCTGT+GGG | - | chr6_1:99812441-99812460 | Msa0902070:intron | 45.0% | |
| !!! | GCTGTTTTTGTTCTGCAGGT+AGG | - | chr6_1:99812884-99812903 | Msa0902070:intron | 45.0% |
| ! | TTTTGTTCTGCAGGTAGGGT+TGG | - | chr6_1:99812889-99812908 | Msa0902070:intron | 45.0% |
| TTTGTTCTGCAGGTAGGGTT+GGG | - | chr6_1:99812890-99812909 | Msa0902070:intron | 45.0% | |
| TCAGTGTGTTGGGTGATTTC+CGG | + | chr6_1:99812916-99812935 | None:intergenic | 45.0% | |
| CAACAGAAAGGTAATCCGAC+AGG | + | chr6_1:99812943-99812962 | None:intergenic | 45.0% | |
| AAACAACAACATGTTGGCGC+TGG | - | chr6_1:99813134-99813153 | Msa0902070:intron | 45.0% | |
| AAACTCAACCCAACCTACAC+AGG | + | chr6_1:99813216-99813235 | None:intergenic | 45.0% | |
| AAAACTGTATACATGGGCCG+AGG | + | chr6_1:99813245-99813264 | None:intergenic | 45.0% | |
| !! | TTGCATGCACTTTTTGGCAG+AGG | - | chr6_1:99813266-99813285 | Msa0902070:intron | 45.0% |
| TGGATGACTCGACAACCATA+AGG | + | chr6_1:99813760-99813779 | None:intergenic | 45.0% | |
| TTATGGTTGTCGAGTCATCC+AGG | - | chr6_1:99813759-99813778 | Msa0902070:three_prime_UTR | 45.0% | |
| ! | GTCAGTTTGTTCTCTTGCTC+AGG | - | chr6_1:99813910-99813929 | Msa0902070:intron | 45.0% |
| ATGCAGCAAGCAACTAACCT+GGG | + | chr6_1:99813957-99813976 | None:intergenic | 45.0% | |
| CACAGCAATTTCATAGGGTG+TGG | + | chr6_1:99814104-99814123 | None:intergenic | 45.0% | |
| CCCTATGAAATTGCTGTGAC+AGG | - | chr6_1:99814106-99814125 | Msa0902070:intron | 45.0% | |
| ! | AGCATGATTTGTGACGGTCT+TGG | - | chr6_1:99814134-99814153 | Msa0902070:intron | 45.0% |
| ! | GTGTTAGCTTCAAACAAGGG+AGG | + | chr6_1:99814441-99814460 | None:intergenic | 45.0% |
| TCCTTGTGGCCTTCACTAAT+AGG | - | chr6_1:99814821-99814840 | Msa0902070:intron | 45.0% | |
| TCCTATTAGTGAAGGCCACA+AGG | + | chr6_1:99814825-99814844 | None:intergenic | 45.0% | |
| TAGTCAATTGCGGCCAATAG+AGG | - | chr6_1:99814941-99814960 | Msa0902070:intron | 45.0% | |
| !! | CTTTGCAGAAGCACCTATTG+CGG | + | chr6_1:99815042-99815061 | None:intergenic | 45.0% |
| TAGACTTCAGTGGGGAACAA+AGG | - | chr6_1:99815133-99815152 | Msa0902070:intron | 45.0% | |
| AGACTTCAGTGGGGAACAAA+GGG | - | chr6_1:99815134-99815153 | Msa0902070:intron | 45.0% | |
| ! | GATGGTCGCAGTTAGTTTGA+AGG | + | chr6_1:99815217-99815236 | None:intergenic | 45.0% |
| CGCAGAAAAGAAAGGAAGGA+TGG | + | chr6_1:99815235-99815254 | None:intergenic | 45.0% | |
| GTCTCGCAGAAAAGAAAGGA+AGG | + | chr6_1:99815239-99815258 | None:intergenic | 45.0% | |
| GGTTGTCTCGCAGAAAAGAA+AGG | + | chr6_1:99815243-99815262 | None:intergenic | 45.0% | |
| GCAGGAAACAGATCGAAAAC+TGG | + | chr6_1:99815353-99815372 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr6_1:99815626-99815645 | None:intergenic | 45.0% |
| GCTGCACACAATACACCAAA+TGG | - | chr6_1:99815660-99815679 | Msa0902070:three_prime_UTR | 45.0% | |
| GCACACAATACACCAAATGG+TGG | - | chr6_1:99815663-99815682 | Msa0902070:three_prime_UTR | 45.0% | |
| AGGTAGTCATCCCTGAATAG+AGG | + | chr6_1:99815980-99815999 | None:intergenic | 45.0% | |
| CATGGCTTAAGGGGAATTTG+AGG | - | chr6_1:99816289-99816308 | Msa0902070:three_prime_UTR | 45.0% | |
| TTTGACTCTGGACCTTGTCA+TGG | - | chr6_1:99816438-99816457 | Msa0902070:three_prime_UTR | 45.0% | |
| AAGGGTAGCAAACCATGACA+AGG | + | chr6_1:99816453-99816472 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr6_1:99816508-99816527 | Msa0902070:CDS | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr6_1:99816509-99816528 | Msa0902070:CDS | 45.0% |
| ACTAAACCCTCCTCATTTGG+GGG | - | chr6_1:99816630-99816649 | Msa0902070:CDS | 45.0% | |
| !! | GTATTGGAGGAGGTTTTTGG+GGG | - | chr6_1:99816665-99816684 | Msa0902070:CDS | 45.0% |
| !! | TATTGGAGGAGGTTTTTGGG+GGG | - | chr6_1:99816666-99816685 | Msa0902070:CDS | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr6_1:99816509-99816528 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr6_1:99816508-99816527 | None:intergenic | 45.0% |
| TTACAGCATGTGTTGGAGAG+AGG | - | chr6_1:99816924-99816943 | Msa0902070:intron | 45.0% | |
| AGAGAGGTAGACCTCAAGAA+AGG | - | chr6_1:99816940-99816959 | Msa0902070:intron | 45.0% | |
| ! | GTGGAGAAATGTCTGGAGTA+TGG | - | chr6_1:99817032-99817051 | Msa0902070:five_prime_UTR | 45.0% |
| !!! | TATTTTTTTTTTATATATTG+AGG | - | chr6_1:99816092-99816111 | Msa0902070:three_prime_UTR | 5.0% |
| !!! | ATTTTTTTTTTATATATTGA+GGG | - | chr6_1:99816093-99816112 | Msa0902070:three_prime_UTR | 5.0% |
| CAGCGAAATCTCACGAATGG+CGG | + | chr6_1:99810362-99810381 | None:intergenic | 50.0% | |
| GAGCAGCGAAATCTCACGAA+TGG | + | chr6_1:99810365-99810384 | None:intergenic | 50.0% | |
| AAACTGTTCCCTGCCAACGT+AGG | + | chr6_1:99810810-99810829 | None:intergenic | 50.0% | |
| TGAAGTAGTGGCTGGACATC+AGG | + | chr6_1:99810854-99810873 | None:intergenic | 50.0% | |
| CCGATTACTGAAGTAGTGGC+TGG | + | chr6_1:99810862-99810881 | None:intergenic | 50.0% | |
| AGCAGCTGCTGTCGCATATA+GGG | + | chr6_1:99810897-99810916 | None:intergenic | 50.0% | |
| AAGCAGCTGCTGTCGCATAT+AGG | + | chr6_1:99810898-99810917 | None:intergenic | 50.0% | |
| TGCGACAGCAGCTGCTTATA+TGG | - | chr6_1:99810901-99810920 | Msa0902070:intron | 50.0% | |
| ATGGTACAGCACCATGAGGA+GGG | + | chr6_1:99811039-99811058 | None:intergenic | 50.0% | |
| AATGGTACAGCACCATGAGG+AGG | + | chr6_1:99811040-99811059 | None:intergenic | 50.0% | |
| ! | GTTGAAACCCCTGGTGTTAG+CGG | + | chr6_1:99811097-99811116 | None:intergenic | 50.0% |
| CTAACACCAGGGGTTTCAAC+CGG | - | chr6_1:99811097-99811116 | Msa0902070:intron | 50.0% | |
| TAACACCAGGGGTTTCAACC+GGG | - | chr6_1:99811098-99811117 | Msa0902070:intron | 50.0% | |
| ACCGGGGGTAATATTTCGCA+TGG | - | chr6_1:99811115-99811134 | Msa0902070:intron | 50.0% | |
| TCGCCAAAAGAAGGCTGTAC+AGG | + | chr6_1:99811187-99811206 | None:intergenic | 50.0% | |
| !! | ACACTTGCTATAGGTGCCTG+TGG | + | chr6_1:99811277-99811296 | None:intergenic | 50.0% |
| GGATATCCAGATGGAAGTCC+TGG | - | chr6_1:99811503-99811522 | Msa0902070:intron | 50.0% | |
| TTTCTACCTCCTGAAAGGCC+AGG | + | chr6_1:99811524-99811543 | None:intergenic | 50.0% | |
| TTTCTACCAGAAGCTGGGGA+AGG | + | chr6_1:99811557-99811576 | None:intergenic | 50.0% | |
| GGGGTCTTGACCACTATCAA+AGG | + | chr6_1:99811614-99811633 | None:intergenic | 50.0% | |
| ! | ACCTCCAGCTTTGATCAGCA+TGG | - | chr6_1:99811805-99811824 | Msa0902070:intron | 50.0% |
| TCCATGCTGATCAAAGCTGG+AGG | + | chr6_1:99811809-99811828 | None:intergenic | 50.0% | |
| ! | GTTTGCCCCCGAATCTGTTT+TGG | - | chr6_1:99811995-99812014 | Msa0902070:intron | 50.0% |
| ATGGAAACCCTTAGCAGAGG+AGG | - | chr6_1:99812057-99812076 | Msa0902070:intron | 50.0% | |
| TGGAAACCCTTAGCAGAGGA+GGG | - | chr6_1:99812058-99812077 | Msa0902070:intron | 50.0% | |
| CAAGTTCCCTCCTCTGCTAA+GGG | + | chr6_1:99812067-99812086 | None:intergenic | 50.0% | |
| TTGGAAGTCAGTGCCCAACT+AGG | + | chr6_1:99812369-99812388 | None:intergenic | 50.0% | |
| TACAACAACCAGCACCTGTG+GGG | - | chr6_1:99812442-99812461 | Msa0902070:intron | 50.0% | |
| !!! | GTGGGCTGTTTTTGTTCTGC+AGG | - | chr6_1:99812880-99812899 | Msa0902070:intron | 50.0% |
| GACAGGTCAGTCAGTGTGTT+GGG | + | chr6_1:99812926-99812945 | None:intergenic | 50.0% | |
| ! | CAACACACTGACTGACCTGT+CGG | - | chr6_1:99812925-99812944 | Msa0902070:intron | 50.0% |
| AATAACCTCGAGTGCCTGCA+CGG | + | chr6_1:99813563-99813582 | None:intergenic | 50.0% | |
| TTGCAGAGTTTGTGCAGACG+AGG | - | chr6_1:99813853-99813872 | Msa0902070:intron | 50.0% | |
| TCTCTTGCTCAGGACCTGTA+TGG | - | chr6_1:99813920-99813939 | Msa0902070:intron | 50.0% | |
| GATGCAGCAAGCAACTAACC+TGG | + | chr6_1:99813958-99813977 | None:intergenic | 50.0% | |
| TGCAAGTGTTCCAGCCGTAT+AGG | + | chr6_1:99814535-99814554 | None:intergenic | 50.0% | |
| GCTGGAACACTTGCAGCTTA+AGG | - | chr6_1:99814540-99814559 | Msa0902070:intron | 50.0% | |
| CGGCAATCAAAACATCGCCA+TGG | + | chr6_1:99815003-99815022 | None:intergenic | 50.0% | |
| GCGGCTGCAACTTTAATACG+CGG | + | chr6_1:99815023-99815042 | None:intergenic | 50.0% | |
| CTGAGCAATGGTTGTGTGTG+CGG | + | chr6_1:99815264-99815283 | None:intergenic | 50.0% | |
| GACAGCTTGGCACTGTTTGA+CGG | + | chr6_1:99815297-99815316 | None:intergenic | 50.0% | |
| AAACAGAACCTGGTCGTGTG+TGG | + | chr6_1:99815327-99815346 | None:intergenic | 50.0% | |
| AGCAGGCAACAGAAAGAAGC+AGG | + | chr6_1:99815371-99815390 | None:intergenic | 50.0% | |
| CTAAAGCTCCAGCATACGCA+GGG | + | chr6_1:99815703-99815722 | None:intergenic | 50.0% | |
| ACTAAAGCTCCAGCATACGC+AGG | + | chr6_1:99815704-99815723 | None:intergenic | 50.0% | |
| ! | ATGCTGGAGCTTTAGTGCAC+CGG | - | chr6_1:99815708-99815727 | Msa0902070:three_prime_UTR | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr6_1:99816507-99816526 | Msa0902070:CDS | 50.0% |
| TTTGCGAGTTTGGAGGGGAA+GGG | - | chr6_1:99816514-99816533 | Msa0902070:CDS | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | - | chr6_1:99816537-99816556 | Msa0902070:CDS | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | - | chr6_1:99816578-99816597 | Msa0902070:CDS | 50.0% | |
| TAGAGGAAAATGGGAGGGGA+GGG | - | chr6_1:99816579-99816598 | Msa0902070:CDS | 50.0% | |
| ! | AAAATGGGAGGGGAGGGTTT+TGG | - | chr6_1:99816585-99816604 | Msa0902070:CDS | 50.0% |
| ! | AAATGGGAGGGGAGGGTTTT+GGG | - | chr6_1:99816586-99816605 | Msa0902070:CDS | 50.0% |
| TTGGTTCCCCCAAATGAGGA+GGG | + | chr6_1:99816639-99816658 | None:intergenic | 50.0% | |
| ! | TTTGGTTCCCCCAAATGAGG+AGG | + | chr6_1:99816640-99816659 | None:intergenic | 50.0% |
| !! | AGGAGGTTTTTGGGGGGTTT+TGG | - | chr6_1:99816672-99816691 | Msa0902070:CDS | 50.0% |
| !! | AGGTTTTTGGGGGGTTTTGG+AGG | - | chr6_1:99816675-99816694 | Msa0902070:CDS | 50.0% |
| !!! | GGTTTTTGGGGGGTTTTGGA+GGG | - | chr6_1:99816676-99816695 | Msa0902070:CDS | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr6_1:99816507-99816526 | None:intergenic | 50.0% |
| ! | AGTATGGTGACGCCTCTGAA+CGG | - | chr6_1:99817048-99817067 | Msa0902070:five_prime_UTR | 50.0% |
| ATCTCACGAATGGCGGTGCT+AGG | + | chr6_1:99810355-99810374 | None:intergenic | 55.0% | |
| AGTGTACACCCTGCCTACGT+TGG | - | chr6_1:99810794-99810813 | Msa0902070:intron | 55.0% | |
| GCTGCTGTCGCATATAGGGT+AGG | + | chr6_1:99810893-99810912 | None:intergenic | 55.0% | |
| ! | TTGAGGAGTGTATCGGCCTG+AGG | + | chr6_1:99810960-99810979 | None:intergenic | 55.0% |
| AGCTATGCTCCGCTAACACC+AGG | - | chr6_1:99811085-99811104 | Msa0902070:intron | 55.0% | |
| GCTATGCTCCGCTAACACCA+GGG | - | chr6_1:99811086-99811105 | Msa0902070:intron | 55.0% | |
| CTATGCTCCGCTAACACCAG+GGG | - | chr6_1:99811087-99811106 | Msa0902070:intron | 55.0% | |
| AACACCAGGGGTTTCAACCG+GGG | - | chr6_1:99811099-99811118 | Msa0902070:intron | 55.0% | |
| ! | GACAAAACTGGACTGGGAGG+TGG | + | chr6_1:99811482-99811501 | None:intergenic | 55.0% |
| ! | CCAGACAAAACTGGACTGGG+AGG | + | chr6_1:99811485-99811504 | None:intergenic | 55.0% |
| !! | CCTCCCAGTCCAGTTTTGTC+TGG | - | chr6_1:99811482-99811501 | Msa0902070:intron | 55.0% |
| GAAAGGCCAGGACTTCCATC+TGG | + | chr6_1:99811512-99811531 | None:intergenic | 55.0% | |
| ! | GATGGAAGTCCTGGCCTTTC+AGG | - | chr6_1:99811512-99811531 | Msa0902070:intron | 55.0% |
| GCAAGTTCCCTCCTCTGCTA+AGG | + | chr6_1:99812068-99812087 | None:intergenic | 55.0% | |
| AAACTCTTCCCCACAGGTGC+TGG | + | chr6_1:99812453-99812472 | None:intergenic | 55.0% | |
| TACCCAGCCCAAGTTGCAGA+TGG | - | chr6_1:99812858-99812877 | Msa0902070:intron | 55.0% | |
| CACCATCTGCAACTTGGGCT+GGG | + | chr6_1:99812863-99812882 | None:intergenic | 55.0% | |
| CAGCCCAAGTTGCAGATGGT+GGG | - | chr6_1:99812862-99812881 | Msa0902070:intron | 55.0% | |
| CAGCCCACCATCTGCAACTT+GGG | + | chr6_1:99812868-99812887 | None:intergenic | 55.0% | |
| ACAGCCCACCATCTGCAACT+TGG | + | chr6_1:99812869-99812888 | None:intergenic | 55.0% | |
| CGACAGGTCAGTCAGTGTGT+TGG | + | chr6_1:99812927-99812946 | None:intergenic | 55.0% | |
| AACCTACACAGGCAGGGGTT+GGG | + | chr6_1:99813205-99813224 | None:intergenic | 55.0% | |
| AACCCCTGCCTGTGTAGGTT+GGG | - | chr6_1:99813205-99813224 | Msa0902070:intron | 55.0% | |
| AACCCAACCTACACAGGCAG+GGG | + | chr6_1:99813210-99813229 | None:intergenic | 55.0% | |
| CAACCCAACCTACACAGGCA+GGG | + | chr6_1:99813211-99813230 | None:intergenic | 55.0% | |
| TCAACCCAACCTACACAGGC+AGG | + | chr6_1:99813212-99813231 | None:intergenic | 55.0% | |
| ! | AGCTCAGCTTGTTCGTGAGC+TGG | - | chr6_1:99813597-99813616 | Msa0902070:three_prime_UTR | 55.0% |
| ! | CAGCTTGTTCGTGAGCTGGA+TGG | - | chr6_1:99813601-99813620 | Msa0902070:three_prime_UTR | 55.0% |
| GTGTTGCAGAGCAACACTGC+TGG | - | chr6_1:99814974-99814993 | Msa0902070:intron | 55.0% | |
| CATCTTGCCTGCGAGATTGC+TGG | - | chr6_1:99815076-99815095 | Msa0902070:intron | 55.0% | |
| CTCATGACCAGCAATCTCGC+AGG | + | chr6_1:99815086-99815105 | None:intergenic | 55.0% | |
| CTGCGAGATTGCTGGTCATG+AGG | - | chr6_1:99815084-99815103 | Msa0902070:intron | 55.0% | |
| AGCTTGGCACTGTTTGACGG+TGG | + | chr6_1:99815294-99815313 | None:intergenic | 55.0% | |
| CAAACAGTGCCAAGCTGTCG+TGG | - | chr6_1:99815298-99815317 | Msa0902070:intron | 55.0% | |
| CAACTTTACCAGCTGCGCCA+AGG | + | chr6_1:99815579-99815598 | None:intergenic | 55.0% | |
| ! | TGTGACTCGGGTTCAAGTCC+TGG | - | chr6_1:99815605-99815624 | Msa0902070:intron | 55.0% |
| ! | TGCTGGAGCTTTAGTGCACC+GGG | - | chr6_1:99815709-99815728 | Msa0902070:three_prime_UTR | 55.0% |
| AGCAACCATCCAGCTATCCC+TGG | - | chr6_1:99815935-99815954 | Msa0902070:three_prime_UTR | 55.0% | |
| GCAACCATCCAGCTATCCCT+GGG | - | chr6_1:99815936-99815955 | Msa0902070:three_prime_UTR | 55.0% | |
| TGAACCCAGGGATAGCTGGA+TGG | + | chr6_1:99815943-99815962 | None:intergenic | 55.0% | |
| ATCCAGCTATCCCTGGGTTC+AGG | - | chr6_1:99815942-99815961 | Msa0902070:three_prime_UTR | 55.0% | |
| TCCAGCTATCCCTGGGTTCA+GGG | - | chr6_1:99815943-99815962 | Msa0902070:three_prime_UTR | 55.0% | |
| TCAGCTCTGCGCCTCTATTC+AGG | - | chr6_1:99815966-99815985 | Msa0902070:three_prime_UTR | 55.0% | |
| CAGCTCTGCGCCTCTATTCA+GGG | - | chr6_1:99815967-99815986 | Msa0902070:three_prime_UTR | 55.0% | |
| AGGTTGTCTCCCTCTTTCCC+TGG | - | chr6_1:99816309-99816328 | Msa0902070:three_prime_UTR | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr6_1:99816513-99816532 | Msa0902070:CDS | 55.0% | |
| ! | AATGGGAGGGGAGGGTTTTG+GGG | - | chr6_1:99816587-99816606 | Msa0902070:CDS | 55.0% |
| AGGGGAAGGGAAGGCTTCTA+GGG | + | chr6_1:99816853-99816872 | None:intergenic | 55.0% | |
| TTTGCGAGTTTGGAGGGGAG+GGG | + | chr6_1:99816871-99816890 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | + | chr6_1:99816513-99816532 | None:intergenic | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | + | chr6_1:99816512-99816531 | None:intergenic | 55.0% | |
| ! | GTATGGTGACGCCTCTGAAC+GGG | - | chr6_1:99817049-99817068 | Msa0902070:five_prime_UTR | 55.0% |
| TACACCCTGCCTACGTTGGC+AGG | - | chr6_1:99810798-99810817 | Msa0902070:intron | 60.0% | |
| ACACCCTGCCTACGTTGGCA+GGG | - | chr6_1:99810799-99810818 | Msa0902070:intron | 60.0% | |
| GTTCCCTGCCAACGTAGGCA+GGG | + | chr6_1:99810805-99810824 | None:intergenic | 60.0% | |
| TGTTCCCTGCCAACGTAGGC+AGG | + | chr6_1:99810806-99810825 | None:intergenic | 60.0% | |
| ACACCAGGGGTTTCAACCGG+GGG | - | chr6_1:99811100-99811119 | Msa0902070:intron | 60.0% | |
| TTACCCCCGGTTGAAACCCC+TGG | + | chr6_1:99811106-99811125 | None:intergenic | 60.0% | |
| ! | GGAAGTCCTGGCCTTTCAGG+AGG | - | chr6_1:99811515-99811534 | Msa0902070:intron | 60.0% |
| ! | CTGCAACTTGGGCTGGGTAC+AGG | + | chr6_1:99812857-99812876 | None:intergenic | 60.0% |
| CCACCATCTGCAACTTGGGC+TGG | + | chr6_1:99812864-99812883 | None:intergenic | 60.0% | |
| CCAGCCCAAGTTGCAGATGG+TGG | - | chr6_1:99812861-99812880 | Msa0902070:intron | 60.0% | |
| TTCTGCAGGTAGGGTTGGGC+CGG | - | chr6_1:99812894-99812913 | Msa0902070:intron | 60.0% | |
| AACCCAACCCCTGCCTGTGT+AGG | - | chr6_1:99813200-99813219 | Msa0902070:intron | 60.0% | |
| CAACCTACACAGGCAGGGGT+TGG | + | chr6_1:99813206-99813225 | None:intergenic | 60.0% | |
| CAACCCCTGCCTGTGTAGGT+TGG | - | chr6_1:99813204-99813223 | Msa0902070:intron | 60.0% | |
| TATGTCCGTGCAGGCACTCG+AGG | - | chr6_1:99813555-99813574 | Msa0902070:intron | 60.0% | |
| CACTGCGATCGCGCCTCTAT+TGG | + | chr6_1:99814957-99814976 | None:intergenic | 60.0% | |
| ! | AGCAACACTGCTGGCTGCCA+TGG | - | chr6_1:99814983-99815002 | Msa0902070:intron | 60.0% |
| GTGTGGCTTCCACGACAGCT+TGG | + | chr6_1:99815310-99815329 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr6_1:99815676-99815695 | Msa0902070:three_prime_UTR | 60.0% |
| ACCCTGAACCCAGGGATAGC+TGG | + | chr6_1:99815947-99815966 | None:intergenic | 60.0% | |
| CAGAGCTGACCCTGAACCCA+GGG | + | chr6_1:99815955-99815974 | None:intergenic | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | - | chr6_1:99816518-99816537 | Msa0902070:CDS | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr6_1:99816519-99816538 | Msa0902070:CDS | 60.0% | |
| !! | ATGGGAGGGGAGGGTTTTGG+GGG | - | chr6_1:99816588-99816607 | Msa0902070:CDS | 60.0% |
| ! | GAAGGGAAGGCTTCTAGGGG+TGG | + | chr6_1:99816849-99816868 | None:intergenic | 60.0% |
| GGGGAAGGGAAGGCTTCTAG+GGG | + | chr6_1:99816852-99816871 | None:intergenic | 60.0% | |
| GAGGGGAAGGGAAGGCTTCT+AGG | + | chr6_1:99816854-99816873 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | + | chr6_1:99816866-99816885 | None:intergenic | 60.0% | |
| GGACTGGGAGGTGGTGAACC+TGG | + | chr6_1:99811473-99811492 | None:intergenic | 65.0% | |
| GGTGGCGTGCGACTGAGCAA+TGG | + | chr6_1:99815276-99815295 | None:intergenic | 65.0% | |
| CGTGGAAGCCACACACGACC+AGG | - | chr6_1:99815316-99815335 | Msa0902070:intron | 65.0% | |
| AGGGGTAACCTTGGCGCAGC+TGG | - | chr6_1:99815568-99815587 | Msa0902070:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr6_1:99815678-99815697 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr6_1:99815691-99815710 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr6_1:99815692-99815711 | None:intergenic | 65.0% | |
| AGCATACGCAGGGTCCGGGA+AGG | + | chr6_1:99815693-99815712 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+TGG | - | chr6_1:99815692-99815711 | Msa0902070:three_prime_UTR | 65.0% | |
| CTCCAGCATACGCAGGGTCC+GGG | + | chr6_1:99815697-99815716 | None:intergenic | 65.0% | |
| GCTCCAGCATACGCAGGGTC+CGG | + | chr6_1:99815698-99815717 | None:intergenic | 65.0% | |
| GCAGAGCTGACCCTGAACCC+AGG | + | chr6_1:99815956-99815975 | None:intergenic | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | - | chr6_1:99816517-99816536 | Msa0902070:CDS | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | - | chr6_1:99816523-99816542 | Msa0902070:CDS | 65.0% | |
| GGGAAGGGAGGGGAAGGCTT+GGG | - | chr6_1:99816529-99816548 | Msa0902070:CDS | 65.0% | |
| !!! | TGGGAGGGGAGGGTTTTGGG+GGG | - | chr6_1:99816589-99816608 | Msa0902070:CDS | 65.0% |
| TTGGAGGGGAGGGGAAGGGA+AGG | + | chr6_1:99816862-99816881 | None:intergenic | 65.0% | |
| CGAGTTTGGAGGGGAGGGGA+AGG | + | chr6_1:99816867-99816886 | None:intergenic | 65.0% | |
| GGGGAAGGGAGGGGAAGGCT+TGG | - | chr6_1:99816528-99816547 | Msa0902070:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 99810266 | 99817095 | 99810266 | ID=Msa0902070;Name=Msa0902070 |
| chr6_1 | mRNA | 99810266 | 99817095 | 99810266 | ID=Msa0902070-mRNA-1;Parent=Msa0902070;Name=Msa0902070-mRNA-1;_AED=0.23;_eAED=0.23;_QI=75|1|1|1|0.16|0.28|7|1577|115 |
| chr6_1 | exon | 99810266 | 99810431 | 99810266 | ID=Msa0902070-mRNA-1:exon:17644;Parent=Msa0902070-mRNA-1 |
| chr6_1 | exon | 99813403 | 99813502 | 99813403 | ID=Msa0902070-mRNA-1:exon:17643;Parent=Msa0902070-mRNA-1 |
| chr6_1 | exon | 99813581 | 99813793 | 99813581 | ID=Msa0902070-mRNA-1:exon:17642;Parent=Msa0902070-mRNA-1 |
| chr6_1 | exon | 99815208 | 99815314 | 99815208 | ID=Msa0902070-mRNA-1:exon:17641;Parent=Msa0902070-mRNA-1 |
| chr6_1 | exon | 99815407 | 99815548 | 99815407 | ID=Msa0902070-mRNA-1:exon:17640;Parent=Msa0902070-mRNA-1 |
| chr6_1 | exon | 99815635 | 99816758 | 99815635 | ID=Msa0902070-mRNA-1:exon:17639;Parent=Msa0902070-mRNA-1 |
| chr6_1 | exon | 99816948 | 99817095 | 99816948 | ID=Msa0902070-mRNA-1:exon:17638;Parent=Msa0902070-mRNA-1 |
| chr6_1 | five_prime_UTR | 99817021 | 99817095 | 99817021 | ID=Msa0902070-mRNA-1:five_prime_utr;Parent=Msa0902070-mRNA-1 |
| chr6_1 | CDS | 99816948 | 99817020 | 99816948 | ID=Msa0902070-mRNA-1:cds;Parent=Msa0902070-mRNA-1 |
| chr6_1 | CDS | 99816484 | 99816758 | 99816484 | ID=Msa0902070-mRNA-1:cds;Parent=Msa0902070-mRNA-1 |
| chr6_1 | three_prime_UTR | 99815635 | 99816483 | 99815635 | ID=Msa0902070-mRNA-1:three_prime_utr;Parent=Msa0902070-mRNA-1 |
| chr6_1 | three_prime_UTR | 99815407 | 99815548 | 99815407 | ID=Msa0902070-mRNA-1:three_prime_utr;Parent=Msa0902070-mRNA-1 |
| chr6_1 | three_prime_UTR | 99815208 | 99815314 | 99815208 | ID=Msa0902070-mRNA-1:three_prime_utr;Parent=Msa0902070-mRNA-1 |
| chr6_1 | three_prime_UTR | 99813581 | 99813793 | 99813581 | ID=Msa0902070-mRNA-1:three_prime_utr;Parent=Msa0902070-mRNA-1 |
| chr6_1 | three_prime_UTR | 99813403 | 99813502 | 99813403 | ID=Msa0902070-mRNA-1:three_prime_utr;Parent=Msa0902070-mRNA-1 |
| chr6_1 | three_prime_UTR | 99810266 | 99810431 | 99810266 | ID=Msa0902070-mRNA-1:three_prime_utr;Parent=Msa0902070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
