AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0210190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210190 MtrunA17_Chr2g0308611 94.277 332 13 3 1 330 1 328 0.0 568
Msa0210190 MtrunA17_Chr1g0175651 52.632 342 86 12 1 328 1 280 3.84e-86 261
Msa0210190 MtrunA17_Chr7g0258831 61.446 249 63 8 75 315 50 273 8.53e-83 253
Msa0210190 MtrunA17_Chr4g0055851 56.349 252 81 6 76 326 22 245 1.17e-75 234
Msa0210190 MtrunA17_Chr5g0399491 61.290 217 53 8 112 325 72 260 1.78e-70 221
Msa0210190 MtrunA17_Chr4g0054421 76.119 134 29 1 181 314 109 239 5.83e-67 211
Msa0210190 MtrunA17_Chr8g0335131 58.216 213 75 4 103 313 58 258 1.14e-62 201
Msa0210190 MtrunA17_Chr5g0400781 63.462 156 50 2 188 340 113 264 1.81e-61 197
Msa0210190 MtrunA17_Chr1g0151971 63.433 134 42 2 184 315 117 245 6.73e-53 176
Msa0210190 MtrunA17_Chr4g0044091 66.129 124 35 2 197 313 59 182 3.68e-49 163
Msa0210190 MtrunA17_Chr3g0135331 62.676 142 49 2 188 329 134 271 1.06e-44 155
Msa0210190 MtrunA17_Chr2g0299031 54.545 132 57 2 202 331 82 212 3.23e-38 135
Msa0210190 MtrunA17_Chr4g0071411 55.462 119 39 2 204 313 90 203 8.40e-34 124
Msa0210190 MtrunA17_Chr6g0453021 33.816 207 82 6 118 288 2 189 1.27e-18 84.7
Msa0210190 MtrunA17_Chr7g0217111 45.946 111 55 3 188 294 67 176 1.45e-18 84.3
Msa0210190 MtrunA17_Chr6g0450991 42.105 114 66 0 202 315 67 180 1.52e-18 84.3
Msa0210190 MtrunA17_Chr4g0060031 44.355 124 63 2 172 289 59 182 2.00e-18 84.7
Msa0210190 MtrunA17_Chr5g0416391 44.554 101 56 0 189 289 64 164 1.74e-17 81.3
Msa0210190 MtrunA17_Chr8g0362151 38.411 151 73 4 152 295 37 174 1.90e-17 81.3
Msa0210190 MtrunA17_Chr3g0119291 39.200 125 67 2 174 289 29 153 2.44e-17 80.5
Msa0210190 MtrunA17_Chr7g0265521 41.489 94 55 0 196 289 57 150 3.27e-17 79.7
Msa0210190 MtrunA17_Chr5g0415941 38.194 144 77 4 154 288 40 180 3.40e-17 81.3
Msa0210190 MtrunA17_Chr3g0123691 37.671 146 79 4 189 323 46 190 3.56e-17 80.9
Msa0210190 MtrunA17_Chr1g0179581 43.333 90 51 0 195 284 21 110 6.13e-17 75.9
Msa0210190 MtrunA17_Chr8g0381741 46.875 96 44 1 201 289 53 148 4.62e-16 77.8
Msa0210190 MtrunA17_Chr8g0362751 44.681 94 45 1 202 288 89 182 2.49e-15 75.5
Msa0210190 MtrunA17_Chr5g0403691 45.882 85 46 0 202 286 53 137 4.00e-11 62.0
Msa0210190 MtrunA17_Chr5g0403701 44.828 87 48 0 202 288 53 139 9.48e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0210190 AT5G06710.1 50.000 332 136 9 1 323 1 311 2.54e-86 264
Msa0210190 AT3G60390.1 59.709 206 71 4 112 313 77 274 3.77e-68 216
Msa0210190 AT2G44910.1 55.405 222 70 3 105 317 78 279 2.41e-67 214
Msa0210190 AT5G47370.1 51.852 270 95 11 73 332 17 261 6.91e-65 207
Msa0210190 AT4G37790.1 61.236 178 58 3 164 333 83 257 7.96e-65 206
Msa0210190 AT4G16780.1 64.198 162 49 3 176 333 108 264 8.82e-61 196
Msa0210190 AT4G17460.1 52.137 234 90 7 91 320 39 254 1.31e-60 196
Msa0210190 AT2G22800.1 75.862 116 28 0 199 314 110 225 2.22e-59 192
Msa0210190 AT2G01430.1 57.746 142 58 2 188 329 125 264 9.14e-48 162
Msa0210190 AT1G70920.2 55.479 146 49 3 186 331 26 155 2.79e-41 142
Msa0210190 AT1G70920.1 55.479 146 49 3 186 331 56 185 3.56e-41 143
Msa0210190 AT5G06710.4 41.288 264 121 10 1 253 1 241 1.04e-39 141
Msa0210190 AT2G01430.2 63.636 66 24 0 188 253 125 190 7.76e-21 89.7
Msa0210190 AT5G06710.2 35.865 237 118 11 1 226 1 214 5.23e-19 85.1
Msa0210190 AT5G06710.3 35.865 237 118 11 1 226 1 214 5.23e-19 85.1
Msa0210190 AT5G03790.1 44.681 94 52 0 197 290 72 165 6.63e-18 82.0
Msa0210190 AT1G69780.1 44.554 101 56 0 189 289 72 172 2.67e-17 81.6
Msa0210190 AT1G26960.1 36.242 149 72 3 190 334 63 192 8.81e-17 79.3
Msa0210190 AT1G27045.5 51.852 81 38 1 188 267 10 90 3.60e-16 76.3
Msa0210190 AT1G27045.3 51.852 81 38 1 188 267 10 90 3.60e-16 76.3
Msa0210190 AT1G27045.2 51.852 81 38 1 188 267 2 82 4.18e-16 75.9
Msa0210190 AT1G27045.1 51.852 81 38 1 188 267 53 133 6.91e-16 76.3
Msa0210190 AT2G36610.1 40.196 102 53 1 197 290 66 167 8.72e-16 75.1
Msa0210190 AT5G15150.1 40.909 110 54 2 186 288 103 208 1.03e-15 77.0
Msa0210190 AT1G27045.4 51.852 81 38 1 188 267 53 133 1.30e-15 75.9
Msa0210190 AT2G18550.1 37.671 146 84 2 180 325 40 178 1.69e-15 75.1
Msa0210190 AT3G01220.1 42.453 106 55 2 190 291 77 180 2.08e-15 75.9
Msa0210190 AT3G01470.1 45.652 92 50 0 202 293 68 159 2.39e-15 75.5
Msa0210190 AT5G03790.2 37.190 121 68 1 197 309 72 192 3.48e-15 73.6
Msa0210190 AT5G65310.1 40.909 110 55 2 190 289 57 166 4.38e-15 75.5
Msa0210190 AT5G65310.2 40.909 110 55 2 190 289 39 148 4.59e-15 75.1
Msa0210190 AT2G22430.1 45.455 99 50 1 198 292 58 156 1.05e-14 74.3
Msa0210190 AT4G40060.1 39.669 121 67 2 176 292 35 153 2.92e-14 72.8
Msa0210190 AT4G36740.2 43.011 93 52 1 196 288 51 142 1.27e-12 66.6
Msa0210190 AT4G36740.1 43.011 93 52 1 196 288 50 141 1.31e-12 66.6
Msa0210190 AT2G46680.2 40.659 91 54 0 197 287 27 117 2.84e-12 66.2
Msa0210190 AT2G46680.1 40.659 91 54 0 197 287 27 117 3.07e-12 66.2

Find 87 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTACCTTGCTCTTCTATTT+TGG 0.112160 2_1:-50241111 None:intergenic
AAAGCCTCTAATTGGATTAA+TGG 0.207556 2_1:+50239729 Msa0210190:CDS
GACTCTTCAAAGCCTCTAAT+TGG 0.231354 2_1:+50239721 Msa0210190:CDS
GGTAGGAGTTTGAGTGGTTC+AGG 0.247485 2_1:+50240327 Msa0210190:CDS
TTGATTATATAGTGAGTTAT+TGG 0.248916 2_1:+50241571 Msa0210190:three_prime_UTR
CTTTGTGTAGTACTAGTAAT+TGG 0.274501 2_1:-50239817 None:intergenic
AGTTGATGCAATACAGGATT+AGG 0.292885 2_1:-50239922 None:intergenic
AAGAAGATGCTGCACTATTC+GGG 0.307898 2_1:-50240263 None:intergenic
AATTTATTATCAACCGAGTT+TGG 0.329723 2_1:+50240153 Msa0210190:CDS
GAAGCCTAAGCCAAGTTCTT+TGG 0.340212 2_1:-50239773 None:intergenic
AAAGAAGATGCTGCACTATT+CGG 0.346517 2_1:-50240264 None:intergenic
ACCGGCGACGGTGGTTGTTA+TGG 0.373808 2_1:+50240212 Msa0210190:CDS
TTCAACACCACTTTATCAAT+TGG 0.386708 2_1:+50239793 Msa0210190:CDS
GAAGAAACTTAGGCTCTCTA+AGG 0.396097 2_1:+50240455 Msa0210190:CDS
TTTGCTCCCTATGTTCCATT+GGG 0.404706 2_1:+50241670 Msa0210190:three_prime_UTR
CACTAACAGAAGAGAATAGA+AGG 0.405793 2_1:+50241330 Msa0210190:CDS
CATCAAGCTTCCAAAGAACT+TGG 0.420365 2_1:+50239763 Msa0210190:CDS
TGGAGGTTCTTCGAGGGGAT+TGG 0.420743 2_1:+50240173 Msa0210190:CDS
AGATCAAGTTGATGCAATAC+AGG 0.427277 2_1:-50239928 None:intergenic
CACATAGTTAAAGTAGTTGC+TGG 0.454337 2_1:-50241416 None:intergenic
TATATAATCAATTCCAATGC+TGG 0.455649 2_1:-50241559 None:intergenic
CCCTATGTTCCATTGGGAGT+TGG 0.459096 2_1:+50241676 Msa0210190:three_prime_UTR
GCTTCCAAAGAACTTGGCTT+AGG 0.468530 2_1:+50239769 Msa0210190:CDS
ATGGAGCTAGGTTTAAGCTT+AGG 0.480018 2_1:+50239697 Msa0210190:CDS
CGTGGTTCCACCGGCGACGG+TGG 0.481596 2_1:+50240203 Msa0210190:CDS
TCTTTCTCTACTTCTGCATA+GGG 0.482605 2_1:-50239670 None:intergenic
GAGGAATGTAAGTGGGGAAA+GGG 0.483038 2_1:-50239593 None:intergenic
TTCCTCAACTCTCATTCCCA+TGG 0.491801 2_1:+50239953 Msa0210190:CDS
TTTGGAACCAGACTTCTACT+TGG 0.497117 2_1:-50241093 None:intergenic
AATACTAGTGCCACAATCAA+TGG 0.499863 2_1:+50241491 Msa0210190:CDS
GCTGGTAATTGCATGTTGAA+TGG 0.500603 2_1:-50241398 None:intergenic
AGTATTAGTGACTGAGGAAG+TGG 0.500829 2_1:-50241474 None:intergenic
TTCTTTCTCTACTTCTGCAT+AGG 0.501212 2_1:-50239671 None:intergenic
GCCCTCGCCAAGTAGAAGTC+TGG 0.501753 2_1:+50241086 Msa0210190:CDS
CCAACTCCCAATGGAACATA+GGG 0.503643 2_1:-50241676 None:intergenic
CCGAGTTTGGAGGTTCTTCG+AGG 0.505267 2_1:+50240166 Msa0210190:CDS
TGAGGAATGTAAGTGGGGAA+AGG 0.507637 2_1:-50239594 None:intergenic
AGAAGTAGAGAAAGAAATCA+TGG 0.509922 2_1:+50239678 Msa0210190:exon
CGAGTTTGGAGGTTCTTCGA+GGG 0.513702 2_1:+50240167 Msa0210190:CDS
GTAACACAAGGAAGAAACTT+AGG 0.517327 2_1:+50240445 Msa0210190:CDS
AGAAGAAGAAAAGACTCAAA+GGG 0.521032 2_1:+50239867 Msa0210190:CDS
TGGAATCCTCCTTCTCAAAA+CGG 0.522286 2_1:+50239973 Msa0210190:CDS
GAGAAAGAAATCATGGAGCT+AGG 0.525164 2_1:+50239685 Msa0210190:exon
AATTGGACCAATTGATAAAG+TGG 0.530240 2_1:-50239800 None:intergenic
AAGAAGAAGAAAAGACTCAA+AGG 0.532446 2_1:+50239866 Msa0210190:CDS
GATAACTGTGGTGTTGGTAA+TGG 0.532740 2_1:+50240423 Msa0210190:CDS
GGATGTGAACGTGGTTCCAC+CGG 0.533881 2_1:+50240194 Msa0210190:CDS
GTTGCAACACGTTCACAAGA+AGG 0.536936 2_1:-50241440 None:intergenic
ACCAACTCCCAATGGAACAT+AGG 0.537837 2_1:-50241677 None:intergenic
AAGGAATGAGGAATGTAAGT+GGG 0.542669 2_1:-50239600 None:intergenic
CCTCGAAGAACCTCCAAACT+CGG 0.543733 2_1:-50240166 None:intergenic
TTATTATCAACCGAGTTTGG+AGG 0.547939 2_1:+50240156 Msa0210190:CDS
GCCATAACAACCACCGTCGC+CGG 0.549269 2_1:-50240213 None:intergenic
AGGAGTTTGAGTGGTTCAGG+AGG 0.550877 2_1:+50240330 Msa0210190:CDS
AAAGGAATGAGGAATGTAAG+TGG 0.551841 2_1:-50239601 None:intergenic
TTGCAACACGTTCACAAGAA+GGG 0.553307 2_1:-50241439 None:intergenic
ATGTACAGTCGAGGAGGAAG+TGG 0.554028 2_1:+50240303 Msa0210190:CDS
AGTGGTGGTAGGAGTTTGAG+TGG 0.555829 2_1:+50240321 Msa0210190:CDS
AGAGAGAGAGAAAAGGAATG+AGG 0.561801 2_1:-50239612 None:intergenic
GAAGATGATAACTGTGGTGT+TGG 0.570473 2_1:+50240417 Msa0210190:CDS
ATGGTGAAGGGTATGATCAA+AGG 0.575898 2_1:+50240373 Msa0210190:CDS
TTTGAGAAGGAGGATTCCAT+GGG 0.580464 2_1:-50239969 None:intergenic
AGGAATGAGGAATGTAAGTG+GGG 0.586510 2_1:-50239599 None:intergenic
GGAAGAAGAAACACACAAAG+TGG 0.587547 2_1:-50239649 None:intergenic
AACCAGACTTCTACTTGGCG+AGG 0.590253 2_1:-50241088 None:intergenic
AATTCTATACCAACTCCCAA+TGG 0.591829 2_1:-50241685 None:intergenic
ATAACAACCACCGTCGCCGG+TGG 0.592195 2_1:-50240210 None:intergenic
GAACGTGGTTCCACCGGCGA+CGG 0.601039 2_1:+50240200 Msa0210190:CDS
AGTTCTTTGGAAGCTTGATG+AGG 0.611059 2_1:-50239760 None:intergenic
TACAGTCGAGGAGGAAGTGG+TGG 0.618589 2_1:+50240306 Msa0210190:CDS
ATTGTTATTACCATTGATTG+TGG 0.625260 2_1:-50241501 None:intergenic
TTCCATGGGAATGAGAGTTG+AGG 0.625263 2_1:-50239955 None:intergenic
ACCAGACTTCTACTTGGCGA+GGG 0.626726 2_1:-50241087 None:intergenic
GAGGGGATTGGATGTGAACG+TGG 0.631637 2_1:+50240185 Msa0210190:CDS
TGTTATGGCGAACGATGAGA+TGG 0.634044 2_1:+50240227 Msa0210190:CDS
GTCGAGGAGGAAGTGGTGGT+AGG 0.639483 2_1:+50240310 Msa0210190:CDS
GGAGTTTGAGTGGTTCAGGA+GGG 0.643496 2_1:+50240331 Msa0210190:CDS
GGTTCCAAAATAGAAGAGCA+AGG 0.645595 2_1:+50241107 Msa0210190:CDS
GAGTTTGGAGGTTCTTCGAG+GGG 0.648065 2_1:+50240168 Msa0210190:CDS
AAGAAACACACAAAGTGGAG+AGG 0.650616 2_1:-50239644 None:intergenic
AGAAGATGCTGCACTATTCG+GGG 0.651031 2_1:-50240262 None:intergenic
GGCACTAGTATTAGTGACTG+AGG 0.651032 2_1:-50241480 None:intergenic
GATCTATGCATGTACAGTCG+AGG 0.663378 2_1:+50240294 Msa0210190:CDS
AGAGAATAGAAGGCTACACA+AGG 0.673785 2_1:+50241340 Msa0210190:CDS
CTATGCATGTACAGTCGAGG+AGG 0.685551 2_1:+50240297 Msa0210190:CDS
AGTGATGAAGATGATAACTG+TGG 0.745381 2_1:+50240411 Msa0210190:CDS
GTGTTGGTAATGGTAACACA+AGG 0.792389 2_1:+50240433 Msa0210190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATAGATTTTTTTTTG+TGG - chr2_1:50240650-50240669 None:intergenic 10.0%
!! CTATATATTAAAGATATATT+TGG - chr2_1:50240802-50240821 None:intergenic 10.0%
!! ATATCTTTAATATATAGTAT+TGG + chr2_1:50240805-50240824 Msa0210190:intron 10.0%
!! ACAAAATAAAACAAATAAAT+GGG - chr2_1:50240979-50240998 None:intergenic 10.0%
!! AACAAAATAAAACAAATAAA+TGG - chr2_1:50240980-50240999 None:intergenic 10.0%
!!! TTTTTTGTTTAAAATACTAA+TGG + chr2_1:50241005-50241024 Msa0210190:intron 10.0%
!!! ATTGATTTAATTTTGTATAT+AGG + chr2_1:50241596-50241615 Msa0210190:three_prime_UTR 10.0%
!!! TTGATTTAATTTTGTATATA+GGG + chr2_1:50241597-50241616 Msa0210190:three_prime_UTR 10.0%
!!! TTTTTATAGATTTTTTTTTG+TGG - chr2_1:50240650-50240669 None:intergenic 10.0%
!! CTATATATTAAAGATATATT+TGG - chr2_1:50240802-50240821 None:intergenic 10.0%
!! ATATCTTTAATATATAGTAT+TGG + chr2_1:50240805-50240824 Msa0210190:intron 10.0%
!! ACAAAATAAAACAAATAAAT+GGG - chr2_1:50240979-50240998 None:intergenic 10.0%
!! AACAAAATAAAACAAATAAA+TGG - chr2_1:50240980-50240999 None:intergenic 10.0%
!!! TTTTTTGTTTAAAATACTAA+TGG + chr2_1:50241005-50241024 Msa0210190:intron 10.0%
!!! ATTGATTTAATTTTGTATAT+AGG + chr2_1:50241596-50241615 Msa0210190:three_prime_UTR 10.0%
!!! TTGATTTAATTTTGTATATA+GGG + chr2_1:50241597-50241616 Msa0210190:three_prime_UTR 10.0%
!!! TAAAATATTGGTAACTTTTT+AGG - chr2_1:50240012-50240031 None:intergenic 15.0%
!! AAGAGTAAAAGATAAAATAT+TGG - chr2_1:50240024-50240043 None:intergenic 15.0%
!!! ATTATTGTTTTTGCAATATT+AGG + chr2_1:50240129-50240148 Msa0210190:intron 15.0%
!!! ATAGAATATTTTCTTTTGAA+AGG - chr2_1:50240752-50240771 None:intergenic 15.0%
!! AATATTCTATGTAATGTTAT+TGG + chr2_1:50240762-50240781 Msa0210190:intron 15.0%
!!! CAACTTTATTTTTTAAACTT+TGG + chr2_1:50241204-50241223 Msa0210190:intron 15.0%
!!! TAAAATATTGGTAACTTTTT+AGG - chr2_1:50240012-50240031 None:intergenic 15.0%
!! AAGAGTAAAAGATAAAATAT+TGG - chr2_1:50240024-50240043 None:intergenic 15.0%
!!! ATTATTGTTTTTGCAATATT+AGG + chr2_1:50240129-50240148 Msa0210190:intron 15.0%
!!! ATAGAATATTTTCTTTTGAA+AGG - chr2_1:50240752-50240771 None:intergenic 15.0%
!! AATATTCTATGTAATGTTAT+TGG + chr2_1:50240762-50240781 Msa0210190:intron 15.0%
!!! CAACTTTATTTTTTAAACTT+TGG + chr2_1:50241204-50241223 Msa0210190:intron 15.0%
!!! TAATCCTATTTTAAAAACAC+TGG - chr2_1:50240091-50240110 None:intergenic 20.0%
!! TGCATAAAAATATGTAAAGT+CGG + chr2_1:50240611-50240630 Msa0210190:intron 20.0%
!!! TATAGATTTTTTTTTGTGGT+CGG - chr2_1:50240646-50240665 None:intergenic 20.0%
!!! TTGTTTAAAATACTAATGGT+TGG + chr2_1:50241009-50241028 Msa0210190:intron 20.0%
!! TTGATTATATAGTGAGTTAT+TGG + chr2_1:50241571-50241590 Msa0210190:three_prime_UTR 20.0%
!!! TAATCCTATTTTAAAAACAC+TGG - chr2_1:50240091-50240110 None:intergenic 20.0%
!! TGCATAAAAATATGTAAAGT+CGG + chr2_1:50240611-50240630 Msa0210190:intron 20.0%
!!! TATAGATTTTTTTTTGTGGT+CGG - chr2_1:50240646-50240665 None:intergenic 20.0%
!!! TTGTTTAAAATACTAATGGT+TGG + chr2_1:50241009-50241028 Msa0210190:intron 20.0%
!! TTGATTATATAGTGAGTTAT+TGG + chr2_1:50241571-50241590 Msa0210190:three_prime_UTR 20.0%
!! TTTTCCATTAATCCAATTAG+AGG - chr2_1:50239736-50239755 None:intergenic 25.0%
!!! GAAACCAGTGTTTTTAAAAT+AGG + chr2_1:50240084-50240103 Msa0210190:intron 25.0%
! AATTTATTATCAACCGAGTT+TGG + chr2_1:50240153-50240172 Msa0210190:CDS 25.0%
! GCATAAAAATATGTAAAGTC+GGG + chr2_1:50240612-50240631 Msa0210190:intron 25.0%
! CATAAAAATATGTAAAGTCG+GGG + chr2_1:50240613-50240632 Msa0210190:intron 25.0%
!!! ATAGATTTTTTTTTGTGGTC+GGG - chr2_1:50240645-50240664 None:intergenic 25.0%
!! ATTTTATGACAATTCTTCCT+TGG + chr2_1:50240952-50240971 Msa0210190:intron 25.0%
! AAAATTATAGTCAAATGCAG+TGG + chr2_1:50241178-50241197 Msa0210190:intron 25.0%
! ATAAATTTATGTTCTGATGC+AGG + chr2_1:50241252-50241271 Msa0210190:intron 25.0%
!! ATTGTTATTACCATTGATTG+TGG - chr2_1:50241504-50241523 None:intergenic 25.0%
! TATATAATCAATTCCAATGC+TGG - chr2_1:50241562-50241581 None:intergenic 25.0%
!! TATATAGGGAATTTTATGAG+AGG + chr2_1:50241611-50241630 Msa0210190:three_prime_UTR 25.0%
!! TTTTCCATTAATCCAATTAG+AGG - chr2_1:50239736-50239755 None:intergenic 25.0%
!!! GAAACCAGTGTTTTTAAAAT+AGG + chr2_1:50240084-50240103 Msa0210190:intron 25.0%
! AATTTATTATCAACCGAGTT+TGG + chr2_1:50240153-50240172 Msa0210190:CDS 25.0%
! GCATAAAAATATGTAAAGTC+GGG + chr2_1:50240612-50240631 Msa0210190:intron 25.0%
! CATAAAAATATGTAAAGTCG+GGG + chr2_1:50240613-50240632 Msa0210190:intron 25.0%
!!! ATAGATTTTTTTTTGTGGTC+GGG - chr2_1:50240645-50240664 None:intergenic 25.0%
!! ATTTTATGACAATTCTTCCT+TGG + chr2_1:50240952-50240971 Msa0210190:intron 25.0%
! AAAATTATAGTCAAATGCAG+TGG + chr2_1:50241178-50241197 Msa0210190:intron 25.0%
! ATAAATTTATGTTCTGATGC+AGG + chr2_1:50241252-50241271 Msa0210190:intron 25.0%
!! ATTGTTATTACCATTGATTG+TGG - chr2_1:50241504-50241523 None:intergenic 25.0%
! TATATAATCAATTCCAATGC+TGG - chr2_1:50241562-50241581 None:intergenic 25.0%
!! TATATAGGGAATTTTATGAG+AGG + chr2_1:50241611-50241630 Msa0210190:three_prime_UTR 25.0%
AGAAGTAGAGAAAGAAATCA+TGG + chr2_1:50239678-50239697 Msa0210190:exon 30.0%
AAAGCCTCTAATTGGATTAA+TGG + chr2_1:50239729-50239748 Msa0210190:CDS 30.0%
TTCAACACCACTTTATCAAT+TGG + chr2_1:50239793-50239812 Msa0210190:CDS 30.0%
AATTGGACCAATTGATAAAG+TGG - chr2_1:50239803-50239822 None:intergenic 30.0%
CTTTGTGTAGTACTAGTAAT+TGG - chr2_1:50239820-50239839 None:intergenic 30.0%
AAGAAGAAGAAAAGACTCAA+AGG + chr2_1:50239866-50239885 Msa0210190:CDS 30.0%
AGAAGAAGAAAAGACTCAAA+GGG + chr2_1:50239867-50239886 Msa0210190:CDS 30.0%
!! TTGGTAACTTTTTAGGAAGT+GGG - chr2_1:50240005-50240024 None:intergenic 30.0%
!! ATTGGTAACTTTTTAGGAAG+TGG - chr2_1:50240006-50240025 None:intergenic 30.0%
GAGAGAAAAAAAACACATAC+AGG - chr2_1:50240531-50240550 None:intergenic 30.0%
AAAACAAATAAATGGGTCCA+AGG - chr2_1:50240972-50240991 None:intergenic 30.0%
AGAAGTAGAGAAAGAAATCA+TGG + chr2_1:50239678-50239697 Msa0210190:exon 30.0%
AAAGCCTCTAATTGGATTAA+TGG + chr2_1:50239729-50239748 Msa0210190:CDS 30.0%
TTCAACACCACTTTATCAAT+TGG + chr2_1:50239793-50239812 Msa0210190:CDS 30.0%
AATTGGACCAATTGATAAAG+TGG - chr2_1:50239803-50239822 None:intergenic 30.0%
CTTTGTGTAGTACTAGTAAT+TGG - chr2_1:50239820-50239839 None:intergenic 30.0%
AAGAAGAAGAAAAGACTCAA+AGG + chr2_1:50239866-50239885 Msa0210190:CDS 30.0%
AGAAGAAGAAAAGACTCAAA+GGG + chr2_1:50239867-50239886 Msa0210190:CDS 30.0%
!! TTGGTAACTTTTTAGGAAGT+GGG - chr2_1:50240005-50240024 None:intergenic 30.0%
!! ATTGGTAACTTTTTAGGAAG+TGG - chr2_1:50240006-50240025 None:intergenic 30.0%
GAGAGAAAAAAAACACATAC+AGG - chr2_1:50240531-50240550 None:intergenic 30.0%
AAAACAAATAAATGGGTCCA+AGG - chr2_1:50240972-50240991 None:intergenic 30.0%
AAGGAATGAGGAATGTAAGT+GGG - chr2_1:50239603-50239622 None:intergenic 35.0%
AAAGGAATGAGGAATGTAAG+TGG - chr2_1:50239604-50239623 None:intergenic 35.0%
TATAGAGAGAGAGAGAGAAA+AGG - chr2_1:50239622-50239641 None:intergenic 35.0%
TCTTTCTCTACTTCTGCATA+GGG - chr2_1:50239673-50239692 None:intergenic 35.0%
TTCTTTCTCTACTTCTGCAT+AGG - chr2_1:50239674-50239693 None:intergenic 35.0%
! AGTTGATGCAATACAGGATT+AGG - chr2_1:50239925-50239944 None:intergenic 35.0%
!! AGATCAAGTTGATGCAATAC+AGG - chr2_1:50239931-50239950 None:intergenic 35.0%
TTATTATCAACCGAGTTTGG+AGG + chr2_1:50240156-50240175 Msa0210190:CDS 35.0%
AAAGAAGATGCTGCACTATT+CGG - chr2_1:50240267-50240286 None:intergenic 35.0%
! AACAAGAGAGAGTTTTCTGA+TGG + chr2_1:50240354-50240373 Msa0210190:CDS 35.0%
AGTGATGAAGATGATAACTG+TGG + chr2_1:50240411-50240430 Msa0210190:CDS 35.0%
GTAACACAAGGAAGAAACTT+AGG + chr2_1:50240445-50240464 Msa0210190:CDS 35.0%
TAAACTGAGTTATGCTCAAG+AGG - chr2_1:50240584-50240603 None:intergenic 35.0%
CTTGAGCATAACTCAGTTTA+TGG + chr2_1:50240584-50240603 Msa0210190:intron 35.0%
TAGTATGTGTGGTATGAATC+TGG - chr2_1:50240679-50240698 None:intergenic 35.0%
TATCGACATGTTAGTATGTG+TGG - chr2_1:50240690-50240709 None:intergenic 35.0%
TGTGGTGTAGAAACAAAAAC+TGG + chr2_1:50241039-50241058 Msa0210190:intron 35.0%
! GTTACCTTGCTCTTCTATTT+TGG - chr2_1:50241114-50241133 None:intergenic 35.0%
CACTAACAGAAGAGAATAGA+AGG + chr2_1:50241330-50241349 Msa0210190:CDS 35.0%
CACATAGTTAAAGTAGTTGC+TGG - chr2_1:50241419-50241438 None:intergenic 35.0%
AATACTAGTGCCACAATCAA+TGG + chr2_1:50241491-50241510 Msa0210190:CDS 35.0%
!!! AATTCCAATGCTGGTTTTTG+AGG - chr2_1:50241553-50241572 None:intergenic 35.0%
AATTCTATACCAACTCCCAA+TGG - chr2_1:50241688-50241707 None:intergenic 35.0%
AAGGAATGAGGAATGTAAGT+GGG - chr2_1:50239603-50239622 None:intergenic 35.0%
AAAGGAATGAGGAATGTAAG+TGG - chr2_1:50239604-50239623 None:intergenic 35.0%
TATAGAGAGAGAGAGAGAAA+AGG - chr2_1:50239622-50239641 None:intergenic 35.0%
TCTTTCTCTACTTCTGCATA+GGG - chr2_1:50239673-50239692 None:intergenic 35.0%
TTCTTTCTCTACTTCTGCAT+AGG - chr2_1:50239674-50239693 None:intergenic 35.0%
! AGTTGATGCAATACAGGATT+AGG - chr2_1:50239925-50239944 None:intergenic 35.0%
!! AGATCAAGTTGATGCAATAC+AGG - chr2_1:50239931-50239950 None:intergenic 35.0%
TTATTATCAACCGAGTTTGG+AGG + chr2_1:50240156-50240175 Msa0210190:CDS 35.0%
AAAGAAGATGCTGCACTATT+CGG - chr2_1:50240267-50240286 None:intergenic 35.0%
! AACAAGAGAGAGTTTTCTGA+TGG + chr2_1:50240354-50240373 Msa0210190:CDS 35.0%
AGTGATGAAGATGATAACTG+TGG + chr2_1:50240411-50240430 Msa0210190:CDS 35.0%
GTAACACAAGGAAGAAACTT+AGG + chr2_1:50240445-50240464 Msa0210190:CDS 35.0%
TAAACTGAGTTATGCTCAAG+AGG - chr2_1:50240584-50240603 None:intergenic 35.0%
CTTGAGCATAACTCAGTTTA+TGG + chr2_1:50240584-50240603 Msa0210190:intron 35.0%
TAGTATGTGTGGTATGAATC+TGG - chr2_1:50240679-50240698 None:intergenic 35.0%
TATCGACATGTTAGTATGTG+TGG - chr2_1:50240690-50240709 None:intergenic 35.0%
TGTGGTGTAGAAACAAAAAC+TGG + chr2_1:50241039-50241058 Msa0210190:intron 35.0%
! GTTACCTTGCTCTTCTATTT+TGG - chr2_1:50241114-50241133 None:intergenic 35.0%
CACTAACAGAAGAGAATAGA+AGG + chr2_1:50241330-50241349 Msa0210190:CDS 35.0%
CACATAGTTAAAGTAGTTGC+TGG - chr2_1:50241419-50241438 None:intergenic 35.0%
AATACTAGTGCCACAATCAA+TGG + chr2_1:50241491-50241510 Msa0210190:CDS 35.0%
!!! AATTCCAATGCTGGTTTTTG+AGG - chr2_1:50241553-50241572 None:intergenic 35.0%
AATTCTATACCAACTCCCAA+TGG - chr2_1:50241688-50241707 None:intergenic 35.0%
AGGAATGAGGAATGTAAGTG+GGG - chr2_1:50239602-50239621 None:intergenic 40.0%
AGAGAGAGAGAAAAGGAATG+AGG - chr2_1:50239615-50239634 None:intergenic 40.0%
AAGAAACACACAAAGTGGAG+AGG - chr2_1:50239647-50239666 None:intergenic 40.0%
GGAAGAAGAAACACACAAAG+TGG - chr2_1:50239652-50239671 None:intergenic 40.0%
GAGAAAGAAATCATGGAGCT+AGG + chr2_1:50239685-50239704 Msa0210190:exon 40.0%
ATGGAGCTAGGTTTAAGCTT+AGG + chr2_1:50239697-50239716 Msa0210190:CDS 40.0%
GACTCTTCAAAGCCTCTAAT+TGG + chr2_1:50239721-50239740 Msa0210190:CDS 40.0%
! AGTTCTTTGGAAGCTTGATG+AGG - chr2_1:50239763-50239782 None:intergenic 40.0%
CATCAAGCTTCCAAAGAACT+TGG + chr2_1:50239763-50239782 Msa0210190:CDS 40.0%
TTTGAGAAGGAGGATTCCAT+GGG - chr2_1:50239972-50239991 None:intergenic 40.0%
!! TTTTGAGAAGGAGGATTCCA+TGG - chr2_1:50239973-50239992 None:intergenic 40.0%
TGGAATCCTCCTTCTCAAAA+CGG + chr2_1:50239973-50239992 Msa0210190:CDS 40.0%
!!! TTGTTACCGTTTTGAGAAGG+AGG - chr2_1:50239982-50240001 None:intergenic 40.0%
AAGAAGATGCTGCACTATTC+GGG - chr2_1:50240266-50240285 None:intergenic 40.0%
! TGCAGCATCTTCTTTTCAGA+TGG + chr2_1:50240272-50240291 Msa0210190:CDS 40.0%
!! AGAGAGTTTTCTGATGGTGA+AGG + chr2_1:50240360-50240379 Msa0210190:CDS 40.0%
!! GAGAGTTTTCTGATGGTGAA+GGG + chr2_1:50240361-50240380 Msa0210190:CDS 40.0%
! ATGGTGAAGGGTATGATCAA+AGG + chr2_1:50240373-50240392 Msa0210190:CDS 40.0%
GAAGATGATAACTGTGGTGT+TGG + chr2_1:50240417-50240436 Msa0210190:CDS 40.0%
!! GATAACTGTGGTGTTGGTAA+TGG + chr2_1:50240423-50240442 Msa0210190:CDS 40.0%
!! GTGTTGGTAATGGTAACACA+AGG + chr2_1:50240433-50240452 Msa0210190:CDS 40.0%
GAAGAAACTTAGGCTCTCTA+AGG + chr2_1:50240455-50240474 Msa0210190:CDS 40.0%
CTAATGGTTGGACACAATTG+TGG + chr2_1:50241021-50241040 Msa0210190:intron 40.0%
! TTTGGAACCAGACTTCTACT+TGG - chr2_1:50241096-50241115 None:intergenic 40.0%
GGTTCCAAAATAGAAGAGCA+AGG + chr2_1:50241107-50241126 Msa0210190:CDS 40.0%
AGAGAATAGAAGGCTACACA+AGG + chr2_1:50241340-50241359 Msa0210190:CDS 40.0%
GCTGGTAATTGCATGTTGAA+TGG - chr2_1:50241401-50241420 None:intergenic 40.0%
TTGCAACACGTTCACAAGAA+GGG - chr2_1:50241442-50241461 None:intergenic 40.0%
AGTATTAGTGACTGAGGAAG+TGG - chr2_1:50241477-50241496 None:intergenic 40.0%
!!! TTTTGAGGTGGAATCATCAC+TGG - chr2_1:50241538-50241557 None:intergenic 40.0%
! TTTTGCTCCCTATGTTCCAT+TGG + chr2_1:50241669-50241688 Msa0210190:three_prime_UTR 40.0%
TTTGCTCCCTATGTTCCATT+GGG + chr2_1:50241670-50241689 Msa0210190:three_prime_UTR 40.0%
AGGAATGAGGAATGTAAGTG+GGG - chr2_1:50239602-50239621 None:intergenic 40.0%
AGAGAGAGAGAAAAGGAATG+AGG - chr2_1:50239615-50239634 None:intergenic 40.0%
AAGAAACACACAAAGTGGAG+AGG - chr2_1:50239647-50239666 None:intergenic 40.0%
GGAAGAAGAAACACACAAAG+TGG - chr2_1:50239652-50239671 None:intergenic 40.0%
GAGAAAGAAATCATGGAGCT+AGG + chr2_1:50239685-50239704 Msa0210190:exon 40.0%
ATGGAGCTAGGTTTAAGCTT+AGG + chr2_1:50239697-50239716 Msa0210190:CDS 40.0%
GACTCTTCAAAGCCTCTAAT+TGG + chr2_1:50239721-50239740 Msa0210190:CDS 40.0%
! AGTTCTTTGGAAGCTTGATG+AGG - chr2_1:50239763-50239782 None:intergenic 40.0%
CATCAAGCTTCCAAAGAACT+TGG + chr2_1:50239763-50239782 Msa0210190:CDS 40.0%
TTTGAGAAGGAGGATTCCAT+GGG - chr2_1:50239972-50239991 None:intergenic 40.0%
!! TTTTGAGAAGGAGGATTCCA+TGG - chr2_1:50239973-50239992 None:intergenic 40.0%
TGGAATCCTCCTTCTCAAAA+CGG + chr2_1:50239973-50239992 Msa0210190:CDS 40.0%
!!! TTGTTACCGTTTTGAGAAGG+AGG - chr2_1:50239982-50240001 None:intergenic 40.0%
AAGAAGATGCTGCACTATTC+GGG - chr2_1:50240266-50240285 None:intergenic 40.0%
! TGCAGCATCTTCTTTTCAGA+TGG + chr2_1:50240272-50240291 Msa0210190:CDS 40.0%
!! AGAGAGTTTTCTGATGGTGA+AGG + chr2_1:50240360-50240379 Msa0210190:CDS 40.0%
!! GAGAGTTTTCTGATGGTGAA+GGG + chr2_1:50240361-50240380 Msa0210190:CDS 40.0%
! ATGGTGAAGGGTATGATCAA+AGG + chr2_1:50240373-50240392 Msa0210190:CDS 40.0%
GAAGATGATAACTGTGGTGT+TGG + chr2_1:50240417-50240436 Msa0210190:CDS 40.0%
!! GATAACTGTGGTGTTGGTAA+TGG + chr2_1:50240423-50240442 Msa0210190:CDS 40.0%
!! GTGTTGGTAATGGTAACACA+AGG + chr2_1:50240433-50240452 Msa0210190:CDS 40.0%
GAAGAAACTTAGGCTCTCTA+AGG + chr2_1:50240455-50240474 Msa0210190:CDS 40.0%
CTAATGGTTGGACACAATTG+TGG + chr2_1:50241021-50241040 Msa0210190:intron 40.0%
! TTTGGAACCAGACTTCTACT+TGG - chr2_1:50241096-50241115 None:intergenic 40.0%
GGTTCCAAAATAGAAGAGCA+AGG + chr2_1:50241107-50241126 Msa0210190:CDS 40.0%
AGAGAATAGAAGGCTACACA+AGG + chr2_1:50241340-50241359 Msa0210190:CDS 40.0%
GCTGGTAATTGCATGTTGAA+TGG - chr2_1:50241401-50241420 None:intergenic 40.0%
TTGCAACACGTTCACAAGAA+GGG - chr2_1:50241442-50241461 None:intergenic 40.0%
AGTATTAGTGACTGAGGAAG+TGG - chr2_1:50241477-50241496 None:intergenic 40.0%
!!! TTTTGAGGTGGAATCATCAC+TGG - chr2_1:50241538-50241557 None:intergenic 40.0%
! TTTTGCTCCCTATGTTCCAT+TGG + chr2_1:50241669-50241688 Msa0210190:three_prime_UTR 40.0%
TTTGCTCCCTATGTTCCATT+GGG + chr2_1:50241670-50241689 Msa0210190:three_prime_UTR 40.0%
GAGGAATGTAAGTGGGGAAA+GGG - chr2_1:50239596-50239615 None:intergenic 45.0%
TGAGGAATGTAAGTGGGGAA+AGG - chr2_1:50239597-50239616 None:intergenic 45.0%
GCTTCCAAAGAACTTGGCTT+AGG + chr2_1:50239769-50239788 Msa0210190:CDS 45.0%
GAAGCCTAAGCCAAGTTCTT+TGG - chr2_1:50239776-50239795 None:intergenic 45.0%
TTCCTCAACTCTCATTCCCA+TGG + chr2_1:50239953-50239972 Msa0210190:CDS 45.0%
TTCCATGGGAATGAGAGTTG+AGG - chr2_1:50239958-50239977 None:intergenic 45.0%
!!! GGGTTGTTACCGTTTTGAGA+AGG - chr2_1:50239985-50240004 None:intergenic 45.0%
TGTTATGGCGAACGATGAGA+TGG + chr2_1:50240227-50240246 Msa0210190:CDS 45.0%
AGAAGATGCTGCACTATTCG+GGG - chr2_1:50240265-50240284 None:intergenic 45.0%
GATCTATGCATGTACAGTCG+AGG + chr2_1:50240294-50240313 Msa0210190:CDS 45.0%
GTTGCAACACGTTCACAAGA+AGG - chr2_1:50241443-50241462 None:intergenic 45.0%
GGCACTAGTATTAGTGACTG+AGG - chr2_1:50241483-50241502 None:intergenic 45.0%
TCCACCTCAAAAACCAGCAT+TGG + chr2_1:50241546-50241565 Msa0210190:three_prime_UTR 45.0%
!!! TCCAATGCTGGTTTTTGAGG+TGG - chr2_1:50241550-50241569 None:intergenic 45.0%
CCAACTCCCAATGGAACATA+GGG - chr2_1:50241679-50241698 None:intergenic 45.0%
ACCAACTCCCAATGGAACAT+AGG - chr2_1:50241680-50241699 None:intergenic 45.0%
GAGGAATGTAAGTGGGGAAA+GGG - chr2_1:50239596-50239615 None:intergenic 45.0%
TGAGGAATGTAAGTGGGGAA+AGG - chr2_1:50239597-50239616 None:intergenic 45.0%
GCTTCCAAAGAACTTGGCTT+AGG + chr2_1:50239769-50239788 Msa0210190:CDS 45.0%
GAAGCCTAAGCCAAGTTCTT+TGG - chr2_1:50239776-50239795 None:intergenic 45.0%
TTCCTCAACTCTCATTCCCA+TGG + chr2_1:50239953-50239972 Msa0210190:CDS 45.0%
TTCCATGGGAATGAGAGTTG+AGG - chr2_1:50239958-50239977 None:intergenic 45.0%
!!! GGGTTGTTACCGTTTTGAGA+AGG - chr2_1:50239985-50240004 None:intergenic 45.0%
TGTTATGGCGAACGATGAGA+TGG + chr2_1:50240227-50240246 Msa0210190:CDS 45.0%
AGAAGATGCTGCACTATTCG+GGG - chr2_1:50240265-50240284 None:intergenic 45.0%
GATCTATGCATGTACAGTCG+AGG + chr2_1:50240294-50240313 Msa0210190:CDS 45.0%
GTTGCAACACGTTCACAAGA+AGG - chr2_1:50241443-50241462 None:intergenic 45.0%
GGCACTAGTATTAGTGACTG+AGG - chr2_1:50241483-50241502 None:intergenic 45.0%
TCCACCTCAAAAACCAGCAT+TGG + chr2_1:50241546-50241565 Msa0210190:three_prime_UTR 45.0%
!!! TCCAATGCTGGTTTTTGAGG+TGG - chr2_1:50241550-50241569 None:intergenic 45.0%
CCAACTCCCAATGGAACATA+GGG - chr2_1:50241679-50241698 None:intergenic 45.0%
ACCAACTCCCAATGGAACAT+AGG - chr2_1:50241680-50241699 None:intergenic 45.0%
CCTCGAAGAACCTCCAAACT+CGG - chr2_1:50240169-50240188 None:intergenic 50.0%
CGAGTTTGGAGGTTCTTCGA+GGG + chr2_1:50240167-50240186 Msa0210190:CDS 50.0%
GAGTTTGGAGGTTCTTCGAG+GGG + chr2_1:50240168-50240187 Msa0210190:CDS 50.0%
CTATGCATGTACAGTCGAGG+AGG + chr2_1:50240297-50240316 Msa0210190:CDS 50.0%
ATGTACAGTCGAGGAGGAAG+TGG + chr2_1:50240303-50240322 Msa0210190:CDS 50.0%
AGTGGTGGTAGGAGTTTGAG+TGG + chr2_1:50240321-50240340 Msa0210190:CDS 50.0%
GGTAGGAGTTTGAGTGGTTC+AGG + chr2_1:50240327-50240346 Msa0210190:CDS 50.0%
AGGAGTTTGAGTGGTTCAGG+AGG + chr2_1:50240330-50240349 Msa0210190:CDS 50.0%
GGAGTTTGAGTGGTTCAGGA+GGG + chr2_1:50240331-50240350 Msa0210190:CDS 50.0%
ACCAGACTTCTACTTGGCGA+GGG - chr2_1:50241090-50241109 None:intergenic 50.0%
AACCAGACTTCTACTTGGCG+AGG - chr2_1:50241091-50241110 None:intergenic 50.0%
CCCTATGTTCCATTGGGAGT+TGG + chr2_1:50241676-50241695 Msa0210190:three_prime_UTR 50.0%
CCTCGAAGAACCTCCAAACT+CGG - chr2_1:50240169-50240188 None:intergenic 50.0%
CGAGTTTGGAGGTTCTTCGA+GGG + chr2_1:50240167-50240186 Msa0210190:CDS 50.0%
GAGTTTGGAGGTTCTTCGAG+GGG + chr2_1:50240168-50240187 Msa0210190:CDS 50.0%
CTATGCATGTACAGTCGAGG+AGG + chr2_1:50240297-50240316 Msa0210190:CDS 50.0%
ATGTACAGTCGAGGAGGAAG+TGG + chr2_1:50240303-50240322 Msa0210190:CDS 50.0%
AGTGGTGGTAGGAGTTTGAG+TGG + chr2_1:50240321-50240340 Msa0210190:CDS 50.0%
GGTAGGAGTTTGAGTGGTTC+AGG + chr2_1:50240327-50240346 Msa0210190:CDS 50.0%
AGGAGTTTGAGTGGTTCAGG+AGG + chr2_1:50240330-50240349 Msa0210190:CDS 50.0%
GGAGTTTGAGTGGTTCAGGA+GGG + chr2_1:50240331-50240350 Msa0210190:CDS 50.0%
ACCAGACTTCTACTTGGCGA+GGG - chr2_1:50241090-50241109 None:intergenic 50.0%
AACCAGACTTCTACTTGGCG+AGG - chr2_1:50241091-50241110 None:intergenic 50.0%
CCCTATGTTCCATTGGGAGT+TGG + chr2_1:50241676-50241695 Msa0210190:three_prime_UTR 50.0%
CCGAGTTTGGAGGTTCTTCG+AGG + chr2_1:50240166-50240185 Msa0210190:CDS 55.0%
TGGAGGTTCTTCGAGGGGAT+TGG + chr2_1:50240173-50240192 Msa0210190:CDS 55.0%
GAGGGGATTGGATGTGAACG+TGG + chr2_1:50240185-50240204 Msa0210190:CDS 55.0%
GGATGTGAACGTGGTTCCAC+CGG + chr2_1:50240194-50240213 Msa0210190:CDS 55.0%
TACAGTCGAGGAGGAAGTGG+TGG + chr2_1:50240306-50240325 Msa0210190:CDS 55.0%
CCGAGTTTGGAGGTTCTTCG+AGG + chr2_1:50240166-50240185 Msa0210190:CDS 55.0%
TGGAGGTTCTTCGAGGGGAT+TGG + chr2_1:50240173-50240192 Msa0210190:CDS 55.0%
GAGGGGATTGGATGTGAACG+TGG + chr2_1:50240185-50240204 Msa0210190:CDS 55.0%
GGATGTGAACGTGGTTCCAC+CGG + chr2_1:50240194-50240213 Msa0210190:CDS 55.0%
TACAGTCGAGGAGGAAGTGG+TGG + chr2_1:50240306-50240325 Msa0210190:CDS 55.0%
ATAACAACCACCGTCGCCGG+TGG - chr2_1:50240213-50240232 None:intergenic 60.0%
ACCGGCGACGGTGGTTGTTA+TGG + chr2_1:50240212-50240231 Msa0210190:CDS 60.0%
GCCATAACAACCACCGTCGC+CGG - chr2_1:50240216-50240235 None:intergenic 60.0%
GTCGAGGAGGAAGTGGTGGT+AGG + chr2_1:50240310-50240329 Msa0210190:CDS 60.0%
GCCCTCGCCAAGTAGAAGTC+TGG + chr2_1:50241086-50241105 Msa0210190:CDS 60.0%
ATAACAACCACCGTCGCCGG+TGG - chr2_1:50240213-50240232 None:intergenic 60.0%
ACCGGCGACGGTGGTTGTTA+TGG + chr2_1:50240212-50240231 Msa0210190:CDS 60.0%
GCCATAACAACCACCGTCGC+CGG - chr2_1:50240216-50240235 None:intergenic 60.0%
GTCGAGGAGGAAGTGGTGGT+AGG + chr2_1:50240310-50240329 Msa0210190:CDS 60.0%
GCCCTCGCCAAGTAGAAGTC+TGG + chr2_1:50241086-50241105 Msa0210190:CDS 60.0%
GAACGTGGTTCCACCGGCGA+CGG + chr2_1:50240200-50240219 Msa0210190:CDS 65.0%
GAACGTGGTTCCACCGGCGA+CGG + chr2_1:50240200-50240219 Msa0210190:CDS 65.0%
CGTGGTTCCACCGGCGACGG+TGG + chr2_1:50240203-50240222 Msa0210190:CDS 75.0%
CGTGGTTCCACCGGCGACGG+TGG + chr2_1:50240203-50240222 Msa0210190:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 50239586 50241711 50239586 ID=Msa0210190;Name=Msa0210190
chr2_1 mRNA 50239586 50241711 50239586 ID=Msa0210190-mRNA-1;Parent=Msa0210190;Name=Msa0210190-mRNA-1;_AED=0.07;_eAED=0.07;_QI=111|1|1|1|1|1|4|170|341
chr2_1 exon 50239586 50239994 50239586 ID=Msa0210190-mRNA-1:exon:13842;Parent=Msa0210190-mRNA-1
chr2_1 exon 50240151 50240530 50240151 ID=Msa0210190-mRNA-1:exon:13843;Parent=Msa0210190-mRNA-1
chr2_1 exon 50241049 50241128 50241049 ID=Msa0210190-mRNA-1:exon:13844;Parent=Msa0210190-mRNA-1
chr2_1 exon 50241274 50241711 50241274 ID=Msa0210190-mRNA-1:exon:13845;Parent=Msa0210190-mRNA-1
chr2_1 five_prime_UTR 50239586 50239696 50239586 ID=Msa0210190-mRNA-1:five_prime_utr;Parent=Msa0210190-mRNA-1
chr2_1 CDS 50239697 50239994 50239697 ID=Msa0210190-mRNA-1:cds;Parent=Msa0210190-mRNA-1
chr2_1 CDS 50240151 50240530 50240151 ID=Msa0210190-mRNA-1:cds;Parent=Msa0210190-mRNA-1
chr2_1 CDS 50241049 50241128 50241049 ID=Msa0210190-mRNA-1:cds;Parent=Msa0210190-mRNA-1
chr2_1 CDS 50241274 50241541 50241274 ID=Msa0210190-mRNA-1:cds;Parent=Msa0210190-mRNA-1
chr2_1 three_prime_UTR 50241542 50241711 50241542 ID=Msa0210190-mRNA-1:three_prime_utr;Parent=Msa0210190-mRNA-1
Gene Sequence

>Msa0210190

ATGGAGCTAGGTTTAAGCTTAGGAGACTCTTCAAAGCCTCTAATTGGATTAATGGAAAAGCATCCTCATCAAGCTTCCAAAGAACTTGGCTTAGGCTTCAACACCACTTTATCAATTGGTCCAATTACTAGTACTACACAAAGAGATCAACTTCAACAACAACAACAACAAGAAGAAGAAAAGACTCAAAGGGACATCAACAACAACAGTAATAGAACTGAAAATCCTAATCCTGTATTGCATCAACTTGATCTTCTTCCTCAACTCTCATTCCCATGGAATCCTCCTTCTCAAAACGGTAATTTATTATCAACCGAGTTTGGAGGTTCTTCGAGGGGATTGGATGTGAACGTGGTTCCACCGGCGACGGTGGTTGTTATGGCGAACGATGAGATGGCGCTTTCGTCGTCCCCGAATAGTGCAGCATCTTCTTTTCAGATGGATCTATGCATGTACAGTCGAGGAGGAAGTGGTGGTAGGAGTTTGAGTGGTTCAGGAGGGAACAAGAGAGAGTTTTCTGATGGTGAAGGGTATGATCAAAGGAATTCTTCAAGAGTTAGTGATGAAGATGATAACTGTGGTGTTGGTAATGGTAACACAAGGAAGAAACTTAGGCTCTCTAAGGATCAATCTGCTTTTCTTGAAGAAAGCTTCAAAGAACATCACACTCTTAATCCTAAACAAAAACTGGCTCTTGCAAAACAACTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAATAGAAGAGCAAGGACTAAGTTGAAACAAACAGAAGTAGATTGTGAATACTTAAAGAGATGCTGTGAAACACTAACAGAAGAGAATAGAAGGCTACACAAGGAACTTCAAGAATTAAGAGCTTTAAAAACTTCAAATCCATTCAACATGCAATTACCAGCAACTACTTTAACTATGTGCCCTTCTTGTGAACGTGTTGCAACAAATTCTTCAGCCACTTCCTCAGTCACTAATACTAGTGCCACAATCAATGGTAATAACAATAACAAAATTAACCAGTGA
Protein sequence

>Msa0210190

MELGLSLGDSSKPLIGLMEKHPHQASKELGLGFNTTLSIGPITSTTQRDQLQQQQQQEEEKTQRDINNNSNRTENPNPVLHQLDLLPQLSFPWNPPSQNGNLLSTEFGGSSRGLDVNVVPPATVVVMANDEMALSSSPNSAASSFQMDLCMYSRGGSGGRSLSGSGGNKREFSDGEGYDQRNSSRVSDEDDNCGVGNGNTRKKLRLSKDQSAFLEESFKEHHTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFNMQLPATTLTMCPSCERVATNSSATSSVTNTSATINGNNNNKINQ*