AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0327210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0327210 MtrunA17_Chr2g0308611 94.864 331 12 3 1 329 1 328 0.0 571
Msa0327210 MtrunA17_Chr1g0175651 52.786 341 86 13 1 327 1 280 2.16e-85 259
Msa0327210 MtrunA17_Chr7g0258831 52.174 322 97 11 1 314 1 273 4.95e-83 253
Msa0327210 MtrunA17_Chr4g0055851 56.349 252 81 6 75 325 22 245 1.19e-75 234
Msa0327210 MtrunA17_Chr5g0399491 61.290 217 53 8 111 324 72 260 2.00e-70 221
Msa0327210 MtrunA17_Chr4g0054421 76.119 134 29 1 180 313 109 239 5.84e-67 211
Msa0327210 MtrunA17_Chr8g0335131 58.216 213 75 4 102 312 58 258 1.12e-62 201
Msa0327210 MtrunA17_Chr5g0400781 63.462 156 50 2 187 339 113 264 1.57e-61 197
Msa0327210 MtrunA17_Chr1g0151971 63.433 134 42 2 183 314 117 245 6.20e-53 176
Msa0327210 MtrunA17_Chr4g0044091 66.129 124 35 2 196 312 59 182 3.62e-49 163
Msa0327210 MtrunA17_Chr3g0135331 62.676 142 49 2 187 328 134 271 8.72e-45 155
Msa0327210 MtrunA17_Chr2g0299031 54.545 132 57 2 201 330 82 212 3.32e-38 135
Msa0327210 MtrunA17_Chr4g0071411 55.462 119 39 2 203 312 90 203 7.48e-34 124
Msa0327210 MtrunA17_Chr6g0453021 33.816 207 82 6 117 287 2 189 1.37e-18 84.3
Msa0327210 MtrunA17_Chr6g0450991 42.105 114 66 0 201 314 67 180 1.39e-18 84.7
Msa0327210 MtrunA17_Chr7g0217111 45.946 111 55 3 187 293 67 176 1.48e-18 84.3
Msa0327210 MtrunA17_Chr4g0060031 44.355 124 63 2 171 288 59 182 1.99e-18 84.7
Msa0327210 MtrunA17_Chr5g0416391 44.554 101 56 0 188 288 64 164 1.69e-17 81.6
Msa0327210 MtrunA17_Chr8g0362151 38.411 151 73 4 151 294 37 174 1.97e-17 81.3
Msa0327210 MtrunA17_Chr3g0119291 39.200 125 67 2 173 288 29 153 2.41e-17 80.5
Msa0327210 MtrunA17_Chr3g0123691 37.671 146 79 4 188 322 46 190 3.08e-17 80.9
Msa0327210 MtrunA17_Chr7g0265521 41.489 94 55 0 195 288 57 150 3.11e-17 79.7
Msa0327210 MtrunA17_Chr5g0415941 38.194 144 77 4 153 287 40 180 3.26e-17 81.3
Msa0327210 MtrunA17_Chr1g0179581 43.333 90 51 0 194 283 21 110 5.44e-17 75.9
Msa0327210 MtrunA17_Chr8g0381741 46.875 96 44 1 200 288 53 148 4.07e-16 77.8
Msa0327210 MtrunA17_Chr8g0362751 44.681 94 45 1 201 287 89 182 2.56e-15 75.1
Msa0327210 MtrunA17_Chr5g0403691 45.882 85 46 0 201 285 53 137 3.97e-11 62.0
Msa0327210 MtrunA17_Chr5g0403701 44.828 87 48 0 201 287 53 139 9.43e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0327210 AT5G06710.1 50.151 331 136 8 1 322 1 311 1.08e-86 265
Msa0327210 AT3G60390.1 59.709 206 71 4 111 312 77 274 4.11e-68 216
Msa0327210 AT2G44910.1 55.405 222 70 3 104 316 78 279 2.87e-67 214
Msa0327210 AT5G47370.1 51.852 270 95 11 72 331 17 261 6.49e-65 207
Msa0327210 AT4G37790.1 61.236 178 58 3 163 332 83 257 7.63e-65 206
Msa0327210 AT4G16780.1 64.198 162 49 3 175 332 108 264 7.69e-61 196
Msa0327210 AT4G17460.1 52.137 234 90 7 90 319 39 254 9.91e-61 196
Msa0327210 AT2G22800.1 75.862 116 28 0 198 313 110 225 2.37e-59 192
Msa0327210 AT2G01430.1 57.746 142 58 2 187 328 125 264 9.28e-48 162
Msa0327210 AT1G70920.2 55.479 146 49 3 185 330 26 155 2.81e-41 142
Msa0327210 AT1G70920.1 55.479 146 49 3 185 330 56 185 4.03e-41 143
Msa0327210 AT5G06710.4 41.762 261 123 8 1 252 1 241 3.79e-40 142
Msa0327210 AT2G01430.2 63.636 66 24 0 187 252 125 190 7.58e-21 89.7
Msa0327210 AT5G06710.2 36.325 234 120 9 1 225 1 214 2.60e-19 85.9
Msa0327210 AT5G06710.3 36.325 234 120 9 1 225 1 214 2.60e-19 85.9
Msa0327210 AT5G03790.1 44.681 94 52 0 196 289 72 165 6.18e-18 82.0
Msa0327210 AT1G69780.1 44.554 101 56 0 188 288 72 172 2.54e-17 81.6
Msa0327210 AT1G26960.1 36.242 149 72 3 189 333 63 192 8.06e-17 79.3
Msa0327210 AT1G27045.5 51.852 81 38 1 187 266 10 90 3.98e-16 75.9
Msa0327210 AT1G27045.3 51.852 81 38 1 187 266 10 90 3.98e-16 75.9
Msa0327210 AT1G27045.2 51.852 81 38 1 187 266 2 82 4.49e-16 75.5
Msa0327210 AT1G27045.1 51.852 81 38 1 187 266 53 133 6.98e-16 76.3
Msa0327210 AT2G36610.1 40.196 102 53 1 196 289 66 167 9.44e-16 75.1
Msa0327210 AT5G15150.1 40.909 110 54 2 185 287 103 208 1.02e-15 77.0
Msa0327210 AT1G27045.4 51.852 81 38 1 187 266 53 133 1.31e-15 75.9
Msa0327210 AT2G18550.1 37.671 146 84 2 179 324 40 178 1.70e-15 75.1
Msa0327210 AT3G01470.1 45.652 92 50 0 201 292 68 159 2.07e-15 75.9
Msa0327210 AT3G01220.1 42.453 106 55 2 189 290 77 180 2.23e-15 75.9
Msa0327210 AT5G03790.2 37.190 121 68 1 196 308 72 192 3.70e-15 73.6
Msa0327210 AT5G65310.2 40.909 110 55 2 189 288 39 148 4.17e-15 75.1
Msa0327210 AT5G65310.1 40.909 110 55 2 189 288 57 166 4.59e-15 75.1
Msa0327210 AT2G22430.1 45.455 99 50 1 197 291 58 156 9.46e-15 74.3
Msa0327210 AT4G40060.1 39.669 121 67 2 175 291 35 153 3.21e-14 72.4
Msa0327210 AT4G36740.2 43.011 93 52 1 195 287 51 142 1.26e-12 66.6
Msa0327210 AT4G36740.1 43.011 93 52 1 195 287 50 141 1.31e-12 66.6
Msa0327210 AT2G46680.2 40.659 91 54 0 196 286 27 117 2.84e-12 66.2
Msa0327210 AT2G46680.1 40.659 91 54 0 196 286 27 117 3.20e-12 66.2

Find 86 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTACCTTGCTCTTCTATTT+TGG 0.134685 2_4:+38858537 None:intergenic
AAAGCCTCTAATTGGATTAA+TGG 0.207556 2_4:-38859911 Msa0327210:CDS
GACTCTTCAAAGCCTCTAAT+TGG 0.231354 2_4:-38859919 Msa0327210:CDS
CTTTGTGTAGTACTAATAAT+TGG 0.238752 2_4:+38859823 None:intergenic
GGTAGGAGTTTGAGTGGTTC+AGG 0.247485 2_4:-38859316 Msa0327210:CDS
TTGATTATATAGTGAGTTAT+TGG 0.248916 2_4:-38858080 Msa0327210:three_prime_UTR
AGTTGATGCAATACAGGATT+AGG 0.292885 2_4:+38859721 None:intergenic
AAGAAGATGCTGCACTATTC+GGG 0.307898 2_4:+38859380 None:intergenic
AATTTATTATCAACCGAGTT+TGG 0.329723 2_4:-38859490 Msa0327210:CDS
GAAGCCTAAGCCAAGTTCTT+TGG 0.340212 2_4:+38859867 None:intergenic
AAAGAAGATGCTGCACTATT+CGG 0.346517 2_4:+38859379 None:intergenic
ACCGGCGACGGTGGTTGTTA+TGG 0.373808 2_4:-38859431 Msa0327210:CDS
TTCAACACCACTTTATCAAT+TGG 0.386708 2_4:-38859847 Msa0327210:CDS
GAAGAAACTTAGGCTCTCTA+AGG 0.396097 2_4:-38859188 Msa0327210:CDS
TTTGCTCCCTATGTTCCATT+GGG 0.404706 2_4:-38857983 Msa0327210:three_prime_UTR
CATCAAGCTTCCAAAGAACT+TGG 0.420365 2_4:-38859877 Msa0327210:CDS
TGGAGGTTCTTCGAGGGGAT+TGG 0.420743 2_4:-38859470 Msa0327210:CDS
AGATCAAGTTGATGCAATAC+AGG 0.427277 2_4:+38859715 None:intergenic
CACATAGTTAAAGTAGTTGC+TGG 0.454337 2_4:+38858235 None:intergenic
TATATAATCAATTCCAATGC+TGG 0.455649 2_4:+38858092 None:intergenic
GAAGTAGAGAAAAGAGATCA+TGG 0.457988 2_4:-38859962 Msa0327210:exon
CCCTATGTTCCATTGGGAGT+TGG 0.459096 2_4:-38857977 Msa0327210:three_prime_UTR
AAACACTAACAGAAGAGAAT+AGG 0.466193 2_4:-38858324 Msa0327210:CDS
GCTTCCAAAGAACTTGGCTT+AGG 0.468530 2_4:-38859871 Msa0327210:CDS
AATTGGACCAATTGATAAAG+TGG 0.476543 2_4:+38859840 None:intergenic
ATGGAGCTAGGTTTAAGCTT+AGG 0.480018 2_4:-38859943 Msa0327210:CDS
GAAGAATGTCAGTGGGGAAA+GGG 0.481044 2_4:+38860042 None:intergenic
CGTGGTTCCACCGGCGACGG+TGG 0.481596 2_4:-38859440 Msa0327210:CDS
GAGGAATATAGAGAGAGAAA+AGG 0.487674 2_4:+38860016 None:intergenic
TTCCTCAACTCTCATTCCCA+TGG 0.491801 2_4:-38859690 Msa0327210:CDS
TTTGGAACCAGACTTCTACT+TGG 0.497117 2_4:+38858555 None:intergenic
AATACTAGTGCCACAATCAA+TGG 0.499863 2_4:-38858160 Msa0327210:CDS
GCTGGTAATTGCATGTTGAA+TGG 0.500603 2_4:+38858253 None:intergenic
AGTATTAGTGACTGAGGAAG+TGG 0.500829 2_4:+38858177 None:intergenic
GCCCTCGCCAAGTAGAAGTC+TGG 0.501753 2_4:-38858562 Msa0327210:CDS
CCAACTCCCAATGGAACATA+GGG 0.503643 2_4:+38857977 None:intergenic
CCGAGTTTGGAGGTTCTTCG+AGG 0.505267 2_4:-38859477 Msa0327210:CDS
TGAAGAATGTCAGTGGGGAA+AGG 0.505627 2_4:+38860041 None:intergenic
CGAGTTTGGAGGTTCTTCGA+GGG 0.513702 2_4:-38859476 Msa0327210:CDS
GTAACACAAGGAAGAAACTT+AGG 0.517327 2_4:-38859198 Msa0327210:CDS
AGAAGAAGAAAAGACTCAAA+GGG 0.521032 2_4:-38859776 Msa0327210:CDS
TGGAATCCTCCTTCTCAAAA+CGG 0.522286 2_4:-38859670 Msa0327210:intron
AAGAAGAAGAAAAGACTCAA+AGG 0.532446 2_4:-38859777 Msa0327210:CDS
GATAACTGTGGTGTTGGTAA+TGG 0.532740 2_4:-38859220 Msa0327210:CDS
GGATGTGAACGTGGTTCCAC+CGG 0.533881 2_4:-38859449 Msa0327210:CDS
GTTGCAACACGTTCACAAGA+AGG 0.536936 2_4:+38858211 None:intergenic
ACCAACTCCCAATGGAACAT+AGG 0.537837 2_4:+38857976 None:intergenic
CCTCGAAGAACCTCCAAACT+CGG 0.543733 2_4:+38859477 None:intergenic
TTATTATCAACCGAGTTTGG+AGG 0.547939 2_4:-38859487 Msa0327210:CDS
GCCATAACAACCACCGTCGC+CGG 0.549269 2_4:+38859430 None:intergenic
AGGAGTTTGAGTGGTTCAGG+AGG 0.550877 2_4:-38859313 Msa0327210:CDS
TTGCAACACGTTCACAAGAA+GGG 0.553307 2_4:+38858212 None:intergenic
ATGTACAGTCGAGGAGGAAG+TGG 0.554028 2_4:-38859340 Msa0327210:CDS
AGTGGTGGTAGGAGTTTGAG+TGG 0.555829 2_4:-38859322 Msa0327210:CDS
AGAAAAGAGATCATGGAGCT+AGG 0.556425 2_4:-38859955 Msa0327210:exon
AAGGAATGAAGAATGTCAGT+GGG 0.565068 2_4:+38860035 None:intergenic
CACTAACAGAAGAGAATAGG+AGG 0.565496 2_4:-38858321 Msa0327210:CDS
GAAGATGATAACTGTGGTGT+TGG 0.570473 2_4:-38859226 Msa0327210:CDS
ATGGTGAAGGGTATGATCAA+AGG 0.575898 2_4:-38859270 Msa0327210:CDS
TTTGAGAAGGAGGATTCCAT+GGG 0.580464 2_4:+38859674 None:intergenic
GGAAGAAGAAACACACAAAG+TGG 0.587547 2_4:+38859992 None:intergenic
AACCAGACTTCTACTTGGCG+AGG 0.590253 2_4:+38858560 None:intergenic
AATTCTATACCAACTCCCAA+TGG 0.591829 2_4:+38857968 None:intergenic
ATAACAACCACCGTCGCCGG+TGG 0.592195 2_4:+38859433 None:intergenic
GAACGTGGTTCCACCGGCGA+CGG 0.601039 2_4:-38859443 Msa0327210:CDS
AGTTCTTTGGAAGCTTGATG+AGG 0.611059 2_4:+38859880 None:intergenic
TACAGTCGAGGAGGAAGTGG+TGG 0.618589 2_4:-38859337 Msa0327210:CDS
AAAGGAATGAAGAATGTCAG+TGG 0.623607 2_4:+38860034 None:intergenic
ATTGTTATTACCATTGATTG+TGG 0.625260 2_4:+38858150 None:intergenic
TTCCATGGGAATGAGAGTTG+AGG 0.625263 2_4:+38859688 None:intergenic
ACCAGACTTCTACTTGGCGA+GGG 0.626726 2_4:+38858561 None:intergenic
GAGGGGATTGGATGTGAACG+TGG 0.631637 2_4:-38859458 Msa0327210:CDS
TGTTATGGCGAACGATGAGA+TGG 0.634044 2_4:-38859416 Msa0327210:CDS
GTCGAGGAGGAAGTGGTGGT+AGG 0.639483 2_4:-38859333 Msa0327210:CDS
GGAGTTTGAGTGGTTCAGGA+GGG 0.643496 2_4:-38859312 Msa0327210:CDS
GGTTCCAAAATAGAAGAGCA+AGG 0.645595 2_4:-38858541 Msa0327210:intron
GAGTTTGGAGGTTCTTCGAG+GGG 0.648065 2_4:-38859475 Msa0327210:CDS
AAGAAACACACAAAGTGGAG+AGG 0.650616 2_4:+38859997 None:intergenic
AGAAGATGCTGCACTATTCG+GGG 0.651031 2_4:+38859381 None:intergenic
GGCACTAGTATTAGTGACTG+AGG 0.651032 2_4:+38858171 None:intergenic
GATCTATGCATGTACAGTCG+AGG 0.663378 2_4:-38859349 Msa0327210:CDS
AGAGAATAGGAGGCTACACA+AGG 0.664591 2_4:-38858311 Msa0327210:CDS
AGGAATGAAGAATGTCAGTG+GGG 0.678415 2_4:+38860036 None:intergenic
CTATGCATGTACAGTCGAGG+AGG 0.685551 2_4:-38859346 Msa0327210:CDS
AGTGATGAAGATGATAACTG+TGG 0.745381 2_4:-38859232 Msa0327210:CDS
GTGTTGGTAATGGTAACACA+AGG 0.792389 2_4:-38859210 Msa0327210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATAAAACAAATAAAT+GGG + chr2_4:38859344-38859363 None:intergenic 10.0%
!! AACAAAATAAAACAAATAAA+TGG + chr2_4:38859345-38859364 None:intergenic 10.0%
!!! TTTTTTGTTTAAAATACTAA+TGG - chr2_4:38859370-38859389 Msa0327210:CDS 10.0%
!!! ATTGATTTAATTTTGTATAT+AGG - chr2_4:38859958-38859977 Msa0327210:exon 10.0%
!!! TTGATTTAATTTTGTATATA+GGG - chr2_4:38859959-38859978 Msa0327210:exon 10.0%
!! ACAAAATAAAACAAATAAAT+GGG + chr2_4:38859344-38859363 None:intergenic 10.0%
!! AACAAAATAAAACAAATAAA+TGG + chr2_4:38859345-38859364 None:intergenic 10.0%
!!! TTTTTTGTTTAAAATACTAA+TGG - chr2_4:38859370-38859389 Msa0327210:CDS 10.0%
!!! ATTGATTTAATTTTGTATAT+AGG - chr2_4:38859958-38859977 Msa0327210:exon 10.0%
!!! TTGATTTAATTTTGTATATA+GGG - chr2_4:38859959-38859978 Msa0327210:exon 10.0%
!!! TAAAATATTGGTAACTTTTT+AGG + chr2_4:38858382-38858401 None:intergenic 15.0%
!! AAGAGTAAAAGATAAAATAT+TGG + chr2_4:38858394-38858413 None:intergenic 15.0%
!!! ATTATTGTTTTTGCAATATT+AGG - chr2_4:38858499-38858518 Msa0327210:intron 15.0%
!!! TTATAGATTTTTTTTTTGGT+CGG + chr2_4:38859016-38859035 None:intergenic 15.0%
!!! ATAGAATATTTTCTTTTGAA+AGG + chr2_4:38859117-38859136 None:intergenic 15.0%
!! AATATTCTATGTAATGTTAT+TGG - chr2_4:38859127-38859146 Msa0327210:intron 15.0%
!! CTATATATTAGAGATATATT+TGG + chr2_4:38859167-38859186 None:intergenic 15.0%
!! ATATCTCTAATATATAGTAT+TGG - chr2_4:38859170-38859189 Msa0327210:CDS 15.0%
!!! CAACTTTATTTTTTAAACTT+TGG - chr2_4:38859566-38859585 Msa0327210:intron 15.0%
!!! TAAAATATTGGTAACTTTTT+AGG + chr2_4:38858382-38858401 None:intergenic 15.0%
!! AAGAGTAAAAGATAAAATAT+TGG + chr2_4:38858394-38858413 None:intergenic 15.0%
!!! ATTATTGTTTTTGCAATATT+AGG - chr2_4:38858499-38858518 Msa0327210:intron 15.0%
!!! TTATAGATTTTTTTTTTGGT+CGG + chr2_4:38859016-38859035 None:intergenic 15.0%
!!! ATAGAATATTTTCTTTTGAA+AGG + chr2_4:38859117-38859136 None:intergenic 15.0%
!! AATATTCTATGTAATGTTAT+TGG - chr2_4:38859127-38859146 Msa0327210:intron 15.0%
!! CTATATATTAGAGATATATT+TGG + chr2_4:38859167-38859186 None:intergenic 15.0%
!! ATATCTCTAATATATAGTAT+TGG - chr2_4:38859170-38859189 Msa0327210:CDS 15.0%
!!! CAACTTTATTTTTTAAACTT+TGG - chr2_4:38859566-38859585 Msa0327210:intron 15.0%
!!! TAATCCTATTTTAAAAACAC+TGG + chr2_4:38858461-38858480 None:intergenic 20.0%
!!! TATAGATTTTTTTTTTGGTC+GGG + chr2_4:38859015-38859034 None:intergenic 20.0%
!!! TTGTTTAAAATACTAATGGT+TGG - chr2_4:38859374-38859393 Msa0327210:CDS 20.0%
!! TTGATTATATAGTGAGTTAT+TGG - chr2_4:38859933-38859952 Msa0327210:CDS 20.0%
!!! TAATCCTATTTTAAAAACAC+TGG + chr2_4:38858461-38858480 None:intergenic 20.0%
!!! TATAGATTTTTTTTTTGGTC+GGG + chr2_4:38859015-38859034 None:intergenic 20.0%
!!! TTGTTTAAAATACTAATGGT+TGG - chr2_4:38859374-38859393 Msa0327210:CDS 20.0%
!! TTGATTATATAGTGAGTTAT+TGG - chr2_4:38859933-38859952 Msa0327210:CDS 20.0%
!! TTTTCCATTAATCCAATTAG+AGG + chr2_4:38858109-38858128 None:intergenic 25.0%
! CTTTGTGTAGTACTAATAAT+TGG + chr2_4:38858193-38858212 None:intergenic 25.0%
!!! GAAACCAGTGTTTTTAAAAT+AGG - chr2_4:38858454-38858473 Msa0327210:intron 25.0%
! AATTTATTATCAACCGAGTT+TGG - chr2_4:38858523-38858542 Msa0327210:intron 25.0%
! TGCATAAAAATATGCAAAGT+CGG - chr2_4:38858981-38859000 Msa0327210:intron 25.0%
!! ATTTTATGACAATTCTTCCT+TGG - chr2_4:38859317-38859336 Msa0327210:CDS 25.0%
! AAAATTATAGTCAAATGCAG+TGG - chr2_4:38859540-38859559 Msa0327210:intron 25.0%
! ATAAATTTATGTTCTGATGC+AGG - chr2_4:38859614-38859633 Msa0327210:intron 25.0%
!! ATTGTTATTACCATTGATTG+TGG + chr2_4:38859866-38859885 None:intergenic 25.0%
! TATATAATCAATTCCAATGC+TGG + chr2_4:38859924-38859943 None:intergenic 25.0%
!! TATATAGGGAATTTTATGAG+AGG - chr2_4:38859973-38859992 Msa0327210:five_prime_UTR 25.0%
!! TTTTCCATTAATCCAATTAG+AGG + chr2_4:38858109-38858128 None:intergenic 25.0%
! CTTTGTGTAGTACTAATAAT+TGG + chr2_4:38858193-38858212 None:intergenic 25.0%
!!! GAAACCAGTGTTTTTAAAAT+AGG - chr2_4:38858454-38858473 Msa0327210:intron 25.0%
! AATTTATTATCAACCGAGTT+TGG - chr2_4:38858523-38858542 Msa0327210:intron 25.0%
! TGCATAAAAATATGCAAAGT+CGG - chr2_4:38858981-38859000 Msa0327210:intron 25.0%
!! ATTTTATGACAATTCTTCCT+TGG - chr2_4:38859317-38859336 Msa0327210:CDS 25.0%
! AAAATTATAGTCAAATGCAG+TGG - chr2_4:38859540-38859559 Msa0327210:intron 25.0%
! ATAAATTTATGTTCTGATGC+AGG - chr2_4:38859614-38859633 Msa0327210:intron 25.0%
!! ATTGTTATTACCATTGATTG+TGG + chr2_4:38859866-38859885 None:intergenic 25.0%
! TATATAATCAATTCCAATGC+TGG + chr2_4:38859924-38859943 None:intergenic 25.0%
!! TATATAGGGAATTTTATGAG+AGG - chr2_4:38859973-38859992 Msa0327210:five_prime_UTR 25.0%
AAAGCCTCTAATTGGATTAA+TGG - chr2_4:38858102-38858121 Msa0327210:three_prime_UTR 30.0%
TTCAACACCACTTTATCAAT+TGG - chr2_4:38858166-38858185 Msa0327210:CDS 30.0%
AATTGGACCAATTGATAAAG+TGG + chr2_4:38858176-38858195 None:intergenic 30.0%
AAGAAGAAGAAAAGACTCAA+AGG - chr2_4:38858236-38858255 Msa0327210:CDS 30.0%
AGAAGAAGAAAAGACTCAAA+GGG - chr2_4:38858237-38858256 Msa0327210:CDS 30.0%
!! TTGGTAACTTTTTAGGAAGT+GGG + chr2_4:38858375-38858394 None:intergenic 30.0%
!! ATTGGTAACTTTTTAGGAAG+TGG + chr2_4:38858376-38858395 None:intergenic 30.0%
GAGAGAAAAAAAACACATAC+AGG + chr2_4:38858901-38858920 None:intergenic 30.0%
GCATAAAAATATGCAAAGTC+GGG - chr2_4:38858982-38859001 Msa0327210:intron 30.0%
CATAAAAATATGCAAAGTCG+GGG - chr2_4:38858983-38859002 Msa0327210:intron 30.0%
ATGTTAGTATGTGATGAATC+TGG + chr2_4:38859048-38859067 None:intergenic 30.0%
AAAACAAATAAATGGGTCCA+AGG + chr2_4:38859337-38859356 None:intergenic 30.0%
AAACACTAACAGAAGAGAAT+AGG - chr2_4:38859689-38859708 Msa0327210:CDS 30.0%
AAAGCCTCTAATTGGATTAA+TGG - chr2_4:38858102-38858121 Msa0327210:three_prime_UTR 30.0%
TTCAACACCACTTTATCAAT+TGG - chr2_4:38858166-38858185 Msa0327210:CDS 30.0%
AATTGGACCAATTGATAAAG+TGG + chr2_4:38858176-38858195 None:intergenic 30.0%
AAGAAGAAGAAAAGACTCAA+AGG - chr2_4:38858236-38858255 Msa0327210:CDS 30.0%
AGAAGAAGAAAAGACTCAAA+GGG - chr2_4:38858237-38858256 Msa0327210:CDS 30.0%
!! TTGGTAACTTTTTAGGAAGT+GGG + chr2_4:38858375-38858394 None:intergenic 30.0%
!! ATTGGTAACTTTTTAGGAAG+TGG + chr2_4:38858376-38858395 None:intergenic 30.0%
GAGAGAAAAAAAACACATAC+AGG + chr2_4:38858901-38858920 None:intergenic 30.0%
GCATAAAAATATGCAAAGTC+GGG - chr2_4:38858982-38859001 Msa0327210:intron 30.0%
CATAAAAATATGCAAAGTCG+GGG - chr2_4:38858983-38859002 Msa0327210:intron 30.0%
ATGTTAGTATGTGATGAATC+TGG + chr2_4:38859048-38859067 None:intergenic 30.0%
AAAACAAATAAATGGGTCCA+AGG + chr2_4:38859337-38859356 None:intergenic 30.0%
AAACACTAACAGAAGAGAAT+AGG - chr2_4:38859689-38859708 Msa0327210:CDS 30.0%
AAGGAATGAAGAATGTCAGT+GGG + chr2_4:38857981-38858000 None:intergenic 35.0%
AAAGGAATGAAGAATGTCAG+TGG + chr2_4:38857982-38858001 None:intergenic 35.0%
GAGGAATATAGAGAGAGAAA+AGG + chr2_4:38858000-38858019 None:intergenic 35.0%
! CTTTTCTCTACTTCTGCATA+GGG + chr2_4:38858045-38858064 None:intergenic 35.0%
! TCTTTTCTCTACTTCTGCAT+AGG + chr2_4:38858046-38858065 None:intergenic 35.0%
GAAGTAGAGAAAAGAGATCA+TGG - chr2_4:38858051-38858070 Msa0327210:three_prime_UTR 35.0%
! AGTTGATGCAATACAGGATT+AGG + chr2_4:38858295-38858314 None:intergenic 35.0%
!! AGATCAAGTTGATGCAATAC+AGG + chr2_4:38858301-38858320 None:intergenic 35.0%
TTATTATCAACCGAGTTTGG+AGG - chr2_4:38858526-38858545 Msa0327210:intron 35.0%
AAAGAAGATGCTGCACTATT+CGG + chr2_4:38858637-38858656 None:intergenic 35.0%
! AACAAGAGAGAGTTTTCTGA+TGG - chr2_4:38858724-38858743 Msa0327210:intron 35.0%
AGTGATGAAGATGATAACTG+TGG - chr2_4:38858781-38858800 Msa0327210:intron 35.0%
GTAACACAAGGAAGAAACTT+AGG - chr2_4:38858815-38858834 Msa0327210:intron 35.0%
TAAACTGAGTTATGCTCAAG+AGG + chr2_4:38858954-38858973 None:intergenic 35.0%
CTTGAGCATAACTCAGTTTA+TGG - chr2_4:38858954-38858973 Msa0327210:intron 35.0%
TAATGGTTGGACACAATTGT+GGG - chr2_4:38859387-38859406 Msa0327210:CDS 35.0%
! TGTACCTTGCTCTTCTATTT+TGG + chr2_4:38859479-38859498 None:intergenic 35.0%
CACATAGTTAAAGTAGTTGC+TGG + chr2_4:38859781-38859800 None:intergenic 35.0%
AATACTAGTGCCACAATCAA+TGG - chr2_4:38859853-38859872 Msa0327210:CDS 35.0%
!!! AATTCCAATGCTGGTTTTTG+AGG + chr2_4:38859915-38859934 None:intergenic 35.0%
AATTCTATACCAACTCCCAA+TGG + chr2_4:38860048-38860067 None:intergenic 35.0%
AAGGAATGAAGAATGTCAGT+GGG + chr2_4:38857981-38858000 None:intergenic 35.0%
AAAGGAATGAAGAATGTCAG+TGG + chr2_4:38857982-38858001 None:intergenic 35.0%
GAGGAATATAGAGAGAGAAA+AGG + chr2_4:38858000-38858019 None:intergenic 35.0%
! CTTTTCTCTACTTCTGCATA+GGG + chr2_4:38858045-38858064 None:intergenic 35.0%
! TCTTTTCTCTACTTCTGCAT+AGG + chr2_4:38858046-38858065 None:intergenic 35.0%
GAAGTAGAGAAAAGAGATCA+TGG - chr2_4:38858051-38858070 Msa0327210:three_prime_UTR 35.0%
! AGTTGATGCAATACAGGATT+AGG + chr2_4:38858295-38858314 None:intergenic 35.0%
!! AGATCAAGTTGATGCAATAC+AGG + chr2_4:38858301-38858320 None:intergenic 35.0%
TTATTATCAACCGAGTTTGG+AGG - chr2_4:38858526-38858545 Msa0327210:intron 35.0%
AAAGAAGATGCTGCACTATT+CGG + chr2_4:38858637-38858656 None:intergenic 35.0%
! AACAAGAGAGAGTTTTCTGA+TGG - chr2_4:38858724-38858743 Msa0327210:intron 35.0%
AGTGATGAAGATGATAACTG+TGG - chr2_4:38858781-38858800 Msa0327210:intron 35.0%
GTAACACAAGGAAGAAACTT+AGG - chr2_4:38858815-38858834 Msa0327210:intron 35.0%
TAAACTGAGTTATGCTCAAG+AGG + chr2_4:38858954-38858973 None:intergenic 35.0%
CTTGAGCATAACTCAGTTTA+TGG - chr2_4:38858954-38858973 Msa0327210:intron 35.0%
TAATGGTTGGACACAATTGT+GGG - chr2_4:38859387-38859406 Msa0327210:CDS 35.0%
! TGTACCTTGCTCTTCTATTT+TGG + chr2_4:38859479-38859498 None:intergenic 35.0%
CACATAGTTAAAGTAGTTGC+TGG + chr2_4:38859781-38859800 None:intergenic 35.0%
AATACTAGTGCCACAATCAA+TGG - chr2_4:38859853-38859872 Msa0327210:CDS 35.0%
!!! AATTCCAATGCTGGTTTTTG+AGG + chr2_4:38859915-38859934 None:intergenic 35.0%
AATTCTATACCAACTCCCAA+TGG + chr2_4:38860048-38860067 None:intergenic 35.0%
AGGAATGAAGAATGTCAGTG+GGG + chr2_4:38857980-38857999 None:intergenic 40.0%
AAGAAACACACAAAGTGGAG+AGG + chr2_4:38858019-38858038 None:intergenic 40.0%
GGAAGAAGAAACACACAAAG+TGG + chr2_4:38858024-38858043 None:intergenic 40.0%
AGAAAAGAGATCATGGAGCT+AGG - chr2_4:38858058-38858077 Msa0327210:three_prime_UTR 40.0%
ATGGAGCTAGGTTTAAGCTT+AGG - chr2_4:38858070-38858089 Msa0327210:three_prime_UTR 40.0%
GACTCTTCAAAGCCTCTAAT+TGG - chr2_4:38858094-38858113 Msa0327210:three_prime_UTR 40.0%
! AGTTCTTTGGAAGCTTGATG+AGG + chr2_4:38858136-38858155 None:intergenic 40.0%
CATCAAGCTTCCAAAGAACT+TGG - chr2_4:38858136-38858155 Msa0327210:CDS 40.0%
TTTGAGAAGGAGGATTCCAT+GGG + chr2_4:38858342-38858361 None:intergenic 40.0%
!! TTTTGAGAAGGAGGATTCCA+TGG + chr2_4:38858343-38858362 None:intergenic 40.0%
TGGAATCCTCCTTCTCAAAA+CGG - chr2_4:38858343-38858362 Msa0327210:CDS 40.0%
!!! TTGTTACCGTTTTGAGAAGG+AGG + chr2_4:38858352-38858371 None:intergenic 40.0%
AAGAAGATGCTGCACTATTC+GGG + chr2_4:38858636-38858655 None:intergenic 40.0%
! TGCAGCATCTTCTTTTCAGA+TGG - chr2_4:38858642-38858661 Msa0327210:intron 40.0%
!! AGAGAGTTTTCTGATGGTGA+AGG - chr2_4:38858730-38858749 Msa0327210:intron 40.0%
!! GAGAGTTTTCTGATGGTGAA+GGG - chr2_4:38858731-38858750 Msa0327210:intron 40.0%
! ATGGTGAAGGGTATGATCAA+AGG - chr2_4:38858743-38858762 Msa0327210:intron 40.0%
GAAGATGATAACTGTGGTGT+TGG - chr2_4:38858787-38858806 Msa0327210:intron 40.0%
!! GATAACTGTGGTGTTGGTAA+TGG - chr2_4:38858793-38858812 Msa0327210:intron 40.0%
!! GTGTTGGTAATGGTAACACA+AGG - chr2_4:38858803-38858822 Msa0327210:intron 40.0%
GAAGAAACTTAGGCTCTCTA+AGG - chr2_4:38858825-38858844 Msa0327210:intron 40.0%
CTAATGGTTGGACACAATTG+TGG - chr2_4:38859386-38859405 Msa0327210:CDS 40.0%
AATGGTTGGACACAATTGTG+GGG - chr2_4:38859388-38859407 Msa0327210:CDS 40.0%
TGTGGGGTAGAAACAAAAAC+TGG - chr2_4:38859404-38859423 Msa0327210:CDS 40.0%
! TTTGGAACCAGACTTCTACT+TGG + chr2_4:38859461-38859480 None:intergenic 40.0%
GGTTCCAAAATAGAAGAGCA+AGG - chr2_4:38859472-38859491 Msa0327210:CDS 40.0%
CACTAACAGAAGAGAATAGG+AGG - chr2_4:38859692-38859711 Msa0327210:CDS 40.0%
GCTGGTAATTGCATGTTGAA+TGG + chr2_4:38859763-38859782 None:intergenic 40.0%
TTGCAACACGTTCACAAGAA+GGG + chr2_4:38859804-38859823 None:intergenic 40.0%
AGTATTAGTGACTGAGGAAG+TGG + chr2_4:38859839-38859858 None:intergenic 40.0%
!!! TTTTGAGGTGGAATCATCAC+TGG + chr2_4:38859900-38859919 None:intergenic 40.0%
! TTTTGCTCCCTATGTTCCAT+TGG - chr2_4:38860029-38860048 Msa0327210:five_prime_UTR 40.0%
TTTGCTCCCTATGTTCCATT+GGG - chr2_4:38860030-38860049 Msa0327210:five_prime_UTR 40.0%
AGGAATGAAGAATGTCAGTG+GGG + chr2_4:38857980-38857999 None:intergenic 40.0%
AAGAAACACACAAAGTGGAG+AGG + chr2_4:38858019-38858038 None:intergenic 40.0%
GGAAGAAGAAACACACAAAG+TGG + chr2_4:38858024-38858043 None:intergenic 40.0%
AGAAAAGAGATCATGGAGCT+AGG - chr2_4:38858058-38858077 Msa0327210:three_prime_UTR 40.0%
ATGGAGCTAGGTTTAAGCTT+AGG - chr2_4:38858070-38858089 Msa0327210:three_prime_UTR 40.0%
GACTCTTCAAAGCCTCTAAT+TGG - chr2_4:38858094-38858113 Msa0327210:three_prime_UTR 40.0%
! AGTTCTTTGGAAGCTTGATG+AGG + chr2_4:38858136-38858155 None:intergenic 40.0%
CATCAAGCTTCCAAAGAACT+TGG - chr2_4:38858136-38858155 Msa0327210:CDS 40.0%
TTTGAGAAGGAGGATTCCAT+GGG + chr2_4:38858342-38858361 None:intergenic 40.0%
!! TTTTGAGAAGGAGGATTCCA+TGG + chr2_4:38858343-38858362 None:intergenic 40.0%
TGGAATCCTCCTTCTCAAAA+CGG - chr2_4:38858343-38858362 Msa0327210:CDS 40.0%
!!! TTGTTACCGTTTTGAGAAGG+AGG + chr2_4:38858352-38858371 None:intergenic 40.0%
AAGAAGATGCTGCACTATTC+GGG + chr2_4:38858636-38858655 None:intergenic 40.0%
! TGCAGCATCTTCTTTTCAGA+TGG - chr2_4:38858642-38858661 Msa0327210:intron 40.0%
!! AGAGAGTTTTCTGATGGTGA+AGG - chr2_4:38858730-38858749 Msa0327210:intron 40.0%
!! GAGAGTTTTCTGATGGTGAA+GGG - chr2_4:38858731-38858750 Msa0327210:intron 40.0%
! ATGGTGAAGGGTATGATCAA+AGG - chr2_4:38858743-38858762 Msa0327210:intron 40.0%
GAAGATGATAACTGTGGTGT+TGG - chr2_4:38858787-38858806 Msa0327210:intron 40.0%
!! GATAACTGTGGTGTTGGTAA+TGG - chr2_4:38858793-38858812 Msa0327210:intron 40.0%
!! GTGTTGGTAATGGTAACACA+AGG - chr2_4:38858803-38858822 Msa0327210:intron 40.0%
GAAGAAACTTAGGCTCTCTA+AGG - chr2_4:38858825-38858844 Msa0327210:intron 40.0%
CTAATGGTTGGACACAATTG+TGG - chr2_4:38859386-38859405 Msa0327210:CDS 40.0%
AATGGTTGGACACAATTGTG+GGG - chr2_4:38859388-38859407 Msa0327210:CDS 40.0%
TGTGGGGTAGAAACAAAAAC+TGG - chr2_4:38859404-38859423 Msa0327210:CDS 40.0%
! TTTGGAACCAGACTTCTACT+TGG + chr2_4:38859461-38859480 None:intergenic 40.0%
GGTTCCAAAATAGAAGAGCA+AGG - chr2_4:38859472-38859491 Msa0327210:CDS 40.0%
CACTAACAGAAGAGAATAGG+AGG - chr2_4:38859692-38859711 Msa0327210:CDS 40.0%
GCTGGTAATTGCATGTTGAA+TGG + chr2_4:38859763-38859782 None:intergenic 40.0%
TTGCAACACGTTCACAAGAA+GGG + chr2_4:38859804-38859823 None:intergenic 40.0%
AGTATTAGTGACTGAGGAAG+TGG + chr2_4:38859839-38859858 None:intergenic 40.0%
!!! TTTTGAGGTGGAATCATCAC+TGG + chr2_4:38859900-38859919 None:intergenic 40.0%
! TTTTGCTCCCTATGTTCCAT+TGG - chr2_4:38860029-38860048 Msa0327210:five_prime_UTR 40.0%
TTTGCTCCCTATGTTCCATT+GGG - chr2_4:38860030-38860049 Msa0327210:five_prime_UTR 40.0%
GAAGAATGTCAGTGGGGAAA+GGG + chr2_4:38857974-38857993 None:intergenic 45.0%
TGAAGAATGTCAGTGGGGAA+AGG + chr2_4:38857975-38857994 None:intergenic 45.0%
GCTTCCAAAGAACTTGGCTT+AGG - chr2_4:38858142-38858161 Msa0327210:CDS 45.0%
GAAGCCTAAGCCAAGTTCTT+TGG + chr2_4:38858149-38858168 None:intergenic 45.0%
TTCCTCAACTCTCATTCCCA+TGG - chr2_4:38858323-38858342 Msa0327210:CDS 45.0%
TTCCATGGGAATGAGAGTTG+AGG + chr2_4:38858328-38858347 None:intergenic 45.0%
!!! GGGTTGTTACCGTTTTGAGA+AGG + chr2_4:38858355-38858374 None:intergenic 45.0%
TGTTATGGCGAACGATGAGA+TGG - chr2_4:38858597-38858616 Msa0327210:CDS 45.0%
AGAAGATGCTGCACTATTCG+GGG + chr2_4:38858635-38858654 None:intergenic 45.0%
GATCTATGCATGTACAGTCG+AGG - chr2_4:38858664-38858683 Msa0327210:intron 45.0%
AGAGAATAGGAGGCTACACA+AGG - chr2_4:38859702-38859721 Msa0327210:CDS 45.0%
GTTGCAACACGTTCACAAGA+AGG + chr2_4:38859805-38859824 None:intergenic 45.0%
GGCACTAGTATTAGTGACTG+AGG + chr2_4:38859845-38859864 None:intergenic 45.0%
TCCACCTCAAAAACCAGCAT+TGG - chr2_4:38859908-38859927 Msa0327210:CDS 45.0%
!!! TCCAATGCTGGTTTTTGAGG+TGG + chr2_4:38859912-38859931 None:intergenic 45.0%
CCAACTCCCAATGGAACATA+GGG + chr2_4:38860039-38860058 None:intergenic 45.0%
ACCAACTCCCAATGGAACAT+AGG + chr2_4:38860040-38860059 None:intergenic 45.0%
GAAGAATGTCAGTGGGGAAA+GGG + chr2_4:38857974-38857993 None:intergenic 45.0%
TGAAGAATGTCAGTGGGGAA+AGG + chr2_4:38857975-38857994 None:intergenic 45.0%
GCTTCCAAAGAACTTGGCTT+AGG - chr2_4:38858142-38858161 Msa0327210:CDS 45.0%
GAAGCCTAAGCCAAGTTCTT+TGG + chr2_4:38858149-38858168 None:intergenic 45.0%
TTCCTCAACTCTCATTCCCA+TGG - chr2_4:38858323-38858342 Msa0327210:CDS 45.0%
TTCCATGGGAATGAGAGTTG+AGG + chr2_4:38858328-38858347 None:intergenic 45.0%
!!! GGGTTGTTACCGTTTTGAGA+AGG + chr2_4:38858355-38858374 None:intergenic 45.0%
TGTTATGGCGAACGATGAGA+TGG - chr2_4:38858597-38858616 Msa0327210:CDS 45.0%
AGAAGATGCTGCACTATTCG+GGG + chr2_4:38858635-38858654 None:intergenic 45.0%
GATCTATGCATGTACAGTCG+AGG - chr2_4:38858664-38858683 Msa0327210:intron 45.0%
AGAGAATAGGAGGCTACACA+AGG - chr2_4:38859702-38859721 Msa0327210:CDS 45.0%
GTTGCAACACGTTCACAAGA+AGG + chr2_4:38859805-38859824 None:intergenic 45.0%
GGCACTAGTATTAGTGACTG+AGG + chr2_4:38859845-38859864 None:intergenic 45.0%
TCCACCTCAAAAACCAGCAT+TGG - chr2_4:38859908-38859927 Msa0327210:CDS 45.0%
!!! TCCAATGCTGGTTTTTGAGG+TGG + chr2_4:38859912-38859931 None:intergenic 45.0%
CCAACTCCCAATGGAACATA+GGG + chr2_4:38860039-38860058 None:intergenic 45.0%
ACCAACTCCCAATGGAACAT+AGG + chr2_4:38860040-38860059 None:intergenic 45.0%
!!! TTTTTTATAGATTTTTTTTT+TGG + chr2_4:38859020-38859039 None:intergenic 5.0%
!!! TTTTTTATAGATTTTTTTTT+TGG + chr2_4:38859020-38859039 None:intergenic 5.0%
CCTCGAAGAACCTCCAAACT+CGG + chr2_4:38858539-38858558 None:intergenic 50.0%
CGAGTTTGGAGGTTCTTCGA+GGG - chr2_4:38858537-38858556 Msa0327210:intron 50.0%
GAGTTTGGAGGTTCTTCGAG+GGG - chr2_4:38858538-38858557 Msa0327210:intron 50.0%
CTATGCATGTACAGTCGAGG+AGG - chr2_4:38858667-38858686 Msa0327210:intron 50.0%
ATGTACAGTCGAGGAGGAAG+TGG - chr2_4:38858673-38858692 Msa0327210:intron 50.0%
AGTGGTGGTAGGAGTTTGAG+TGG - chr2_4:38858691-38858710 Msa0327210:intron 50.0%
GGTAGGAGTTTGAGTGGTTC+AGG - chr2_4:38858697-38858716 Msa0327210:intron 50.0%
AGGAGTTTGAGTGGTTCAGG+AGG - chr2_4:38858700-38858719 Msa0327210:intron 50.0%
GGAGTTTGAGTGGTTCAGGA+GGG - chr2_4:38858701-38858720 Msa0327210:intron 50.0%
ACCAGACTTCTACTTGGCGA+GGG + chr2_4:38859455-38859474 None:intergenic 50.0%
AACCAGACTTCTACTTGGCG+AGG + chr2_4:38859456-38859475 None:intergenic 50.0%
CCCTATGTTCCATTGGGAGT+TGG - chr2_4:38860036-38860055 Msa0327210:five_prime_UTR 50.0%
CCTCGAAGAACCTCCAAACT+CGG + chr2_4:38858539-38858558 None:intergenic 50.0%
CGAGTTTGGAGGTTCTTCGA+GGG - chr2_4:38858537-38858556 Msa0327210:intron 50.0%
GAGTTTGGAGGTTCTTCGAG+GGG - chr2_4:38858538-38858557 Msa0327210:intron 50.0%
CTATGCATGTACAGTCGAGG+AGG - chr2_4:38858667-38858686 Msa0327210:intron 50.0%
ATGTACAGTCGAGGAGGAAG+TGG - chr2_4:38858673-38858692 Msa0327210:intron 50.0%
AGTGGTGGTAGGAGTTTGAG+TGG - chr2_4:38858691-38858710 Msa0327210:intron 50.0%
GGTAGGAGTTTGAGTGGTTC+AGG - chr2_4:38858697-38858716 Msa0327210:intron 50.0%
AGGAGTTTGAGTGGTTCAGG+AGG - chr2_4:38858700-38858719 Msa0327210:intron 50.0%
GGAGTTTGAGTGGTTCAGGA+GGG - chr2_4:38858701-38858720 Msa0327210:intron 50.0%
ACCAGACTTCTACTTGGCGA+GGG + chr2_4:38859455-38859474 None:intergenic 50.0%
AACCAGACTTCTACTTGGCG+AGG + chr2_4:38859456-38859475 None:intergenic 50.0%
CCCTATGTTCCATTGGGAGT+TGG - chr2_4:38860036-38860055 Msa0327210:five_prime_UTR 50.0%
CCGAGTTTGGAGGTTCTTCG+AGG - chr2_4:38858536-38858555 Msa0327210:intron 55.0%
TGGAGGTTCTTCGAGGGGAT+TGG - chr2_4:38858543-38858562 Msa0327210:CDS 55.0%
GAGGGGATTGGATGTGAACG+TGG - chr2_4:38858555-38858574 Msa0327210:CDS 55.0%
GGATGTGAACGTGGTTCCAC+CGG - chr2_4:38858564-38858583 Msa0327210:CDS 55.0%
TACAGTCGAGGAGGAAGTGG+TGG - chr2_4:38858676-38858695 Msa0327210:intron 55.0%
CCGAGTTTGGAGGTTCTTCG+AGG - chr2_4:38858536-38858555 Msa0327210:intron 55.0%
TGGAGGTTCTTCGAGGGGAT+TGG - chr2_4:38858543-38858562 Msa0327210:CDS 55.0%
GAGGGGATTGGATGTGAACG+TGG - chr2_4:38858555-38858574 Msa0327210:CDS 55.0%
GGATGTGAACGTGGTTCCAC+CGG - chr2_4:38858564-38858583 Msa0327210:CDS 55.0%
TACAGTCGAGGAGGAAGTGG+TGG - chr2_4:38858676-38858695 Msa0327210:intron 55.0%
ATAACAACCACCGTCGCCGG+TGG + chr2_4:38858583-38858602 None:intergenic 60.0%
ACCGGCGACGGTGGTTGTTA+TGG - chr2_4:38858582-38858601 Msa0327210:CDS 60.0%
GCCATAACAACCACCGTCGC+CGG + chr2_4:38858586-38858605 None:intergenic 60.0%
GTCGAGGAGGAAGTGGTGGT+AGG - chr2_4:38858680-38858699 Msa0327210:intron 60.0%
GCCCTCGCCAAGTAGAAGTC+TGG - chr2_4:38859451-38859470 Msa0327210:CDS 60.0%
ATAACAACCACCGTCGCCGG+TGG + chr2_4:38858583-38858602 None:intergenic 60.0%
ACCGGCGACGGTGGTTGTTA+TGG - chr2_4:38858582-38858601 Msa0327210:CDS 60.0%
GCCATAACAACCACCGTCGC+CGG + chr2_4:38858586-38858605 None:intergenic 60.0%
GTCGAGGAGGAAGTGGTGGT+AGG - chr2_4:38858680-38858699 Msa0327210:intron 60.0%
GCCCTCGCCAAGTAGAAGTC+TGG - chr2_4:38859451-38859470 Msa0327210:CDS 60.0%
GAACGTGGTTCCACCGGCGA+CGG - chr2_4:38858570-38858589 Msa0327210:CDS 65.0%
GAACGTGGTTCCACCGGCGA+CGG - chr2_4:38858570-38858589 Msa0327210:CDS 65.0%
CGTGGTTCCACCGGCGACGG+TGG - chr2_4:38858573-38858592 Msa0327210:CDS 75.0%
CGTGGTTCCACCGGCGACGG+TGG - chr2_4:38858573-38858592 Msa0327210:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 38857964 38860071 38857964 ID=Msa0327210;Name=Msa0327210
chr2_4 mRNA 38857964 38860071 38857964 ID=Msa0327210-mRNA-1;Parent=Msa0327210;Name=Msa0327210-mRNA-1;_AED=0.06;_eAED=0.06;_QI=106|1|1|1|1|1|4|168|340
chr2_4 exon 38857964 38858399 38857964 ID=Msa0327210-mRNA-1:exon:11637;Parent=Msa0327210-mRNA-1
chr2_4 exon 38858542 38858621 38858542 ID=Msa0327210-mRNA-1:exon:11636;Parent=Msa0327210-mRNA-1
chr2_4 exon 38859135 38859514 38859135 ID=Msa0327210-mRNA-1:exon:11635;Parent=Msa0327210-mRNA-1
chr2_4 exon 38859671 38860071 38859671 ID=Msa0327210-mRNA-1:exon:11634;Parent=Msa0327210-mRNA-1
chr2_4 five_prime_UTR 38859966 38860071 38859966 ID=Msa0327210-mRNA-1:five_prime_utr;Parent=Msa0327210-mRNA-1
chr2_4 CDS 38859671 38859965 38859671 ID=Msa0327210-mRNA-1:cds;Parent=Msa0327210-mRNA-1
chr2_4 CDS 38859135 38859514 38859135 ID=Msa0327210-mRNA-1:cds;Parent=Msa0327210-mRNA-1
chr2_4 CDS 38858542 38858621 38858542 ID=Msa0327210-mRNA-1:cds;Parent=Msa0327210-mRNA-1
chr2_4 CDS 38858132 38858399 38858132 ID=Msa0327210-mRNA-1:cds;Parent=Msa0327210-mRNA-1
chr2_4 three_prime_UTR 38857964 38858131 38857964 ID=Msa0327210-mRNA-1:three_prime_utr;Parent=Msa0327210-mRNA-1
Gene Sequence

>Msa0327210

ATGGAGCTAGGTTTAAGCTTAGGAGACTCTTCAAAGCCTCTAATTGGATTAATGGAAAAGCATCCTCATCAAGCTTCCAAAGAACTTGGCTTAGGCTTCAACACCACTTTATCAATTGGTCCAATTATTAGTACTACACAAAGAGATCAACTTCAACAACAACAACAAGAAGAAGAAAAGACTCAAAGGGACATCAACAACAACAGTAATAGAACTGAAAATCCTAATCCTGTATTGCATCAACTTGATCTTCTTCCTCAACTCTCATTCCCATGGAATCCTCCTTCTCAAAACGGTAATTTATTATCAACCGAGTTTGGAGGTTCTTCGAGGGGATTGGATGTGAACGTGGTTCCACCGGCGACGGTGGTTGTTATGGCGAACGATGAGATGGCGCTTTCGTCGTCCCCGAATAGTGCAGCATCTTCTTTTCAGATGGATCTATGCATGTACAGTCGAGGAGGAAGTGGTGGTAGGAGTTTGAGTGGTTCAGGAGGGAACAAGAGAGAGTTTTCTGATGGTGAAGGGTATGATCAAAGGAATTCTTCAAGAGTTAGTGATGAAGATGATAACTGTGGTGTTGGTAATGGTAACACAAGGAAGAAACTTAGGCTCTCTAAGGATCAATCTGCTTTTCTTGAAGAAAGCTTCAAAGAACATCACACTCTTAATCCTAAACAAAAACTGGCTCTTGCAAAACAACTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAATAGAAGAGCAAGGACTAAGTTGAAACAAACAGAAGTAGATTGTGAATACTTAAAGAGATGCTGTGAAACACTAACAGAAGAGAATAGGAGGCTACACAAGGAACTTCAAGAATTAAGAGCTTTAAAAACTTCAAATCCATTCAACATGCAATTACCAGCAACTACTTTAACTATGTGCCCTTCTTGTGAACGTGTTGCAACAAATTCTTCAGCCACTTCCTCAGTCACTAATACTAGTGCCACAATCAATGGTAATAACAATAACAAAATTAACCAGTGA
Protein sequence

>Msa0327210

MELGLSLGDSSKPLIGLMEKHPHQASKELGLGFNTTLSIGPIISTTQRDQLQQQQQEEEKTQRDINNNSNRTENPNPVLHQLDLLPQLSFPWNPPSQNGNLLSTEFGGSSRGLDVNVVPPATVVVMANDEMALSSSPNSAASSFQMDLCMYSRGGSGGRSLSGSGGNKREFSDGEGYDQRNSSRVSDEDDNCGVGNGNTRKKLRLSKDQSAFLEESFKEHHTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFNMQLPATTLTMCPSCERVATNSSATSSVTNTSATINGNNNNKINQ*