Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216380 | GAU44414.1 | 91.084 | 415 | 33 | 1 | 1 | 415 | 1 | 411 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216380 | sp|F4IEM5|GCR2_ARATH | 68.193 | 415 | 127 | 1 | 1 | 415 | 1 | 410 | 0.0 | 591 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216380 | A0A2Z6NIX7 | 91.084 | 415 | 33 | 1 | 1 | 415 | 1 | 411 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0216380 | Msa0334290 | 0.886141 | 4.426124e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216380 | MtrunA17_Chr2g0317911 | 85.132 | 417 | 24 | 2 | 1 | 415 | 1 | 381 | 0.0 | 700 |
| Msa0216380 | MtrunA17_Chr4g0021701 | 65.707 | 417 | 141 | 2 | 1 | 415 | 25 | 441 | 0.0 | 587 |
| Msa0216380 | MtrunA17_Chr3g0123781 | 49.231 | 390 | 177 | 7 | 41 | 415 | 32 | 415 | 1.63e-118 | 351 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216380 | AT1G52920.1 | 68.193 | 415 | 127 | 1 | 1 | 415 | 1 | 410 | 0.0 | 591 |
| Msa0216380 | AT2G20770.1 | 63.702 | 416 | 139 | 3 | 1 | 415 | 1 | 405 | 0.0 | 552 |
| Msa0216380 | AT5G65280.1 | 45.592 | 397 | 189 | 9 | 41 | 415 | 42 | 433 | 2.20e-113 | 339 |
| Msa0216380 | AT5G65280.2 | 47.573 | 309 | 147 | 5 | 121 | 415 | 4 | 311 | 7.84e-97 | 292 |
Find 123 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAAGATCATCCACATTCT+TGG | 0.288609 | 2_1:-62168411 | None:intergenic |
| ATACCTCTTTGAATTGTCTA+AGG | 0.293167 | 2_1:-62169322 | None:intergenic |
| AGACCTTCGAATAAGGAATA+AGG | 0.296203 | 2_1:-62170467 | None:intergenic |
| CATCCACATTCTTGGTTACT+TGG | 0.297066 | 2_1:-62168403 | None:intergenic |
| ATGGCAGAACAGGTTACTTA+TGG | 0.303883 | 2_1:+62169488 | Msa0216380:CDS |
| TCCTCCAAGACCTTCGAATA+AGG | 0.318685 | 2_1:-62170474 | None:intergenic |
| GGTGCTGCTCATGGACTTGC+AGG | 0.320322 | 2_1:+62169767 | Msa0216380:CDS |
| CGTGCCGGTGTTTGTGCTCT+TGG | 0.351585 | 2_1:+62169251 | Msa0216380:CDS |
| CTCCTCCATGCATCTTTCCT+TGG | 0.360360 | 2_1:-62170439 | None:intergenic |
| TTGACATCTTCCACCTCATC+TGG | 0.364253 | 2_1:-62169824 | None:intergenic |
| TCAAAACCACGCAATATATC+AGG | 0.370925 | 2_1:+62170616 | Msa0216380:three_prime_UTR |
| TATTCCTTATTCGAAGGTCT+TGG | 0.377583 | 2_1:+62170470 | Msa0216380:CDS |
| CATTGGTGTCACGGTGCTCC+TGG | 0.378975 | 2_1:+62169932 | Msa0216380:CDS |
| AATGGCATGGGAAGAAATAC+TGG | 0.383288 | 2_1:+62169744 | Msa0216380:CDS |
| GAGTTATTGTATGGCAGAAC+AGG | 0.390773 | 2_1:+62169478 | Msa0216380:CDS |
| CCACAAGTGGCTAGGTTCCC+TGG | 0.391353 | 2_1:+62170527 | Msa0216380:CDS |
| GGTTCTTGGAACGGCATACT+TGG | 0.395964 | 2_1:+62168367 | Msa0216380:CDS |
| TGTTCTTCAAGTGTTGTCTC+TGG | 0.397728 | 2_1:-62167738 | None:intergenic |
| AGCACTTCACTTCAAACAAT+TGG | 0.406303 | 2_1:+62167860 | Msa0216380:CDS |
| GTTATAACTTCATCCACAAT+TGG | 0.424250 | 2_1:-62169674 | None:intergenic |
| GTCAGATTCACTTCCTTCAC+TGG | 0.425272 | 2_1:-62169900 | None:intergenic |
| CTTTCTCTGTACAGATTGAC+AGG | 0.431846 | 2_1:+62170344 | Msa0216380:CDS |
| TGGCAGAACAGGTTACTTAT+GGG | 0.432303 | 2_1:+62169489 | Msa0216380:CDS |
| TCATTCTTAAACAAGCATAT+CGG | 0.434369 | 2_1:+62169517 | Msa0216380:CDS |
| CTGGAGAAGTAGTGTGGAAG+AGG | 0.439642 | 2_1:+62170264 | Msa0216380:CDS |
| TATACCTTTCTAGACATGAT+TGG | 0.445743 | 2_1:+62170503 | Msa0216380:CDS |
| CAAAATTTATTACATCTCCT+TGG | 0.456306 | 2_1:-62170642 | None:intergenic |
| ATTCTGCTTCAGCAAATTCA+AGG | 0.460631 | 2_1:+62168462 | Msa0216380:CDS |
| GACCTTCGAATAAGGAATAA+GGG | 0.464630 | 2_1:-62170466 | None:intergenic |
| TCTGCCATACAATAACTCAT+AGG | 0.466009 | 2_1:-62169473 | None:intergenic |
| GTGTTTGGTAAGGTAGAGAA+AGG | 0.471162 | 2_1:-62167815 | None:intergenic |
| TCCTTATTCGAAGGTCTTGG+AGG | 0.474374 | 2_1:+62170473 | Msa0216380:CDS |
| AAATACTGGGGTGCTGCTCA+TGG | 0.483810 | 2_1:+62169758 | Msa0216380:CDS |
| CGCCCTTATTCCTTATTCGA+AGG | 0.485112 | 2_1:+62170464 | Msa0216380:CDS |
| TTTATGCTTGAAGATTGTTA+AGG | 0.488334 | 2_1:+62168433 | Msa0216380:CDS |
| ATGCCTTACCGTGTAGGTAG+TGG | 0.491158 | 2_1:-62169554 | None:intergenic |
| AGGGGTCTTCTTAAGCGAGT+TGG | 0.504459 | 2_1:+62170284 | Msa0216380:CDS |
| GAGTACTTGTACAGGGCTAA+AGG | 0.505457 | 2_1:+62170374 | Msa0216380:CDS |
| AGTGTTGTCTCTGGCATGAA+TGG | 0.507407 | 2_1:-62167729 | None:intergenic |
| TTGCCCTATGAGTTATTGTA+TGG | 0.507703 | 2_1:+62169469 | Msa0216380:CDS |
| GTGACTCAAAGTTCATAGCC+AGG | 0.511069 | 2_1:-62170545 | None:intergenic |
| TTTGAGGTGAGTGTTTGGTA+AGG | 0.514421 | 2_1:-62167825 | None:intergenic |
| CAAGAGCACAAACACCGGCA+CGG | 0.514774 | 2_1:-62169250 | None:intergenic |
| TCGCAAGCAGCAGAAGATGC+TGG | 0.517377 | 2_1:+62170245 | Msa0216380:CDS |
| GAAACAAGGAGTACTTGTAC+AGG | 0.518932 | 2_1:+62170366 | Msa0216380:CDS |
| ACGTTCATCTGTGGCCGTGC+CGG | 0.520688 | 2_1:+62169236 | Msa0216380:CDS |
| CGTCTTGTGCATTGGTGTCA+CGG | 0.521333 | 2_1:+62169923 | Msa0216380:CDS |
| TGGACCAATCATGTCTAGAA+AGG | 0.522222 | 2_1:-62170507 | None:intergenic |
| ATGAATGGTGGCAAGTTGTT+CGG | 0.523714 | 2_1:-62167714 | None:intergenic |
| GTGGATGAAGTTATAACAGC+TGG | 0.524603 | 2_1:+62169680 | Msa0216380:CDS |
| AGGAGTGTGGTGAGAGAATG+TGG | 0.527873 | 2_1:-62167795 | None:intergenic |
| CTGCCATACAATAACTCATA+GGG | 0.530788 | 2_1:-62169472 | None:intergenic |
| ATTCGAAGGTCTTGGAGGAA+TGG | 0.532742 | 2_1:+62170478 | Msa0216380:CDS |
| GGAATTTGCCACGGCATCAG+TGG | 0.534765 | 2_1:+62170305 | Msa0216380:CDS |
| GTGGTGAGAGAATGTGGTGT+TGG | 0.535315 | 2_1:-62167789 | None:intergenic |
| GGCAATTATCCCTCCAGTGA+AGG | 0.536493 | 2_1:+62169887 | Msa0216380:CDS |
| GATGTCCTTTGATGTATGAA+TGG | 0.539425 | 2_1:+62169726 | Msa0216380:CDS |
| AGCACCAAGAGCACAAACAC+CGG | 0.540687 | 2_1:-62169255 | None:intergenic |
| AGATGAGGTGGAAGATGTCA+AGG | 0.556890 | 2_1:+62169826 | Msa0216380:CDS |
| AGTGAGACATGGGGTTCTAG+TGG | 0.556968 | 2_1:+62168311 | Msa0216380:CDS |
| ATACATTTGTAATATACATA+CGG | 0.563477 | 2_1:-62170583 | None:intergenic |
| TTAAGGTGGTGAGTGAGACA+TGG | 0.563607 | 2_1:+62168300 | Msa0216380:intron |
| TAAGGTGGTGAGTGAGACAT+GGG | 0.563863 | 2_1:+62168301 | Msa0216380:intron |
| TGGTGTTGGTGTTTGAGAAG+AGG | 0.569749 | 2_1:-62167775 | None:intergenic |
| AACTCATAGGGCAAATCAGT+GGG | 0.573329 | 2_1:-62169460 | None:intergenic |
| TGGTAGAAAATTAGCTCACA+AGG | 0.574909 | 2_1:+62169700 | Msa0216380:CDS |
| GAAGGACTATACGCTTTACA+CGG | 0.574930 | 2_1:+62168343 | Msa0216380:CDS |
| CGCAATATATCAGGTTGCCA+AGG | 0.580060 | 2_1:+62170625 | Msa0216380:three_prime_UTR |
| GAATTTGCCACGGCATCAGT+GGG | 0.580597 | 2_1:+62170306 | Msa0216380:CDS |
| TGCCTTACCGTGTAGGTAGT+GGG | 0.583545 | 2_1:-62169553 | None:intergenic |
| GTACAGAGAAAGAAAGACAT+AGG | 0.584385 | 2_1:-62170333 | None:intergenic |
| ATCAGCCAAGGAAAGATGCA+TGG | 0.587677 | 2_1:+62170434 | Msa0216380:CDS |
| AGATTCACTTCCTTCACTGG+AGG | 0.588226 | 2_1:-62169897 | None:intergenic |
| TGATTGGTCCACAAGTGGCT+AGG | 0.590458 | 2_1:+62170519 | Msa0216380:CDS |
| CCAGGGAACCTAGCCACTTG+TGG | 0.590886 | 2_1:-62170527 | None:intergenic |
| CACAATACCCACTACCTACA+CGG | 0.590900 | 2_1:+62169546 | Msa0216380:CDS |
| GGAACTTAAGCCAGATGAGG+TGG | 0.592388 | 2_1:+62169814 | Msa0216380:CDS |
| GGTAACTGTCTGTCTTTAGC+CGG | 0.594474 | 2_1:+62167671 | Msa0216380:five_prime_UTR |
| GCGCAAGAATTGATCAGCCA+AGG | 0.594615 | 2_1:+62170422 | Msa0216380:CDS |
| GTACAGATTGACAGGAAACA+AGG | 0.596022 | 2_1:+62170352 | Msa0216380:CDS |
| ACAAGCGTAAGAGTTACTCC+AGG | 0.600044 | 2_1:-62169950 | None:intergenic |
| ATGGCATGGGAAGAAATACT+GGG | 0.602526 | 2_1:+62169745 | Msa0216380:CDS |
| CCATGCCATTCATACATCAA+AGG | 0.604422 | 2_1:-62169731 | None:intergenic |
| TGGAGAAGTAGTGTGGAAGA+GGG | 0.604928 | 2_1:+62170265 | Msa0216380:CDS |
| CTACCAAGTAACCAAGAATG+TGG | 0.605333 | 2_1:+62168400 | Msa0216380:CDS |
| AATCTGACCGTCTTGTGCAT+TGG | 0.606132 | 2_1:+62169915 | Msa0216380:CDS |
| AAGGACTATACGCTTTACAC+GGG | 0.607848 | 2_1:+62168344 | Msa0216380:CDS |
| AAGCGAGTTGGAATTTGCCA+CGG | 0.608188 | 2_1:+62170296 | Msa0216380:CDS |
| GCTGTTATAGCTAAGCAAGC+TGG | 0.609160 | 2_1:+62169275 | Msa0216380:CDS |
| GAACATATGCCTTACCGTGT+AGG | 0.609489 | 2_1:-62169560 | None:intergenic |
| GATTCACTTCCTTCACTGGA+GGG | 0.611653 | 2_1:-62169896 | None:intergenic |
| TGGCAACCTGATATATTGCG+TGG | 0.612006 | 2_1:-62170622 | None:intergenic |
| AGGTGTTCCCACTGATGCCG+TGG | 0.612064 | 2_1:-62170313 | None:intergenic |
| TTTAGCCGGAGATGTCTGAT+CGG | 0.613413 | 2_1:+62167685 | Msa0216380:exon |
| TTCTAGTGGGAACCGTGTGA+AGG | 0.618170 | 2_1:+62168325 | Msa0216380:CDS |
| GTGAGACATGGGGTTCTAGT+GGG | 0.619681 | 2_1:+62168312 | Msa0216380:CDS |
| CAGACAGTTACCGTCTAGAG+AGG | 0.620683 | 2_1:-62167660 | None:intergenic |
| TGTTTATCGACCTCTCTAGA+CGG | 0.620955 | 2_1:+62167650 | Msa0216380:five_prime_UTR |
| TTACCTTAGACAATTCAAAG+AGG | 0.627912 | 2_1:+62169319 | Msa0216380:CDS |
| AAAGAGTAAACTGTGATGCA+CGG | 0.628743 | 2_1:+62170728 | Msa0216380:three_prime_UTR |
| TAACTCATAGGGCAAATCAG+TGG | 0.629793 | 2_1:-62169461 | None:intergenic |
| CTTTGATGTATGAATGGCAT+GGG | 0.630619 | 2_1:+62169732 | Msa0216380:CDS |
| TGACTCAAAGTTCATAGCCA+GGG | 0.635792 | 2_1:-62170544 | None:intergenic |
| AGGACTATACGCTTTACACG+GGG | 0.636276 | 2_1:+62168345 | Msa0216380:CDS |
| AAGATGCTGGAGAAGTAGTG+TGG | 0.637341 | 2_1:+62170258 | Msa0216380:CDS |
| AGACATGATTGGTCCACAAG+TGG | 0.638089 | 2_1:+62170514 | Msa0216380:CDS |
| GGCCACAGATGAACGTCACA+CGG | 0.640066 | 2_1:-62169229 | None:intergenic |
| TACGCTTGTAAAAGCAGCCG+AGG | 0.641247 | 2_1:+62169964 | Msa0216380:CDS |
| GGAGAAGTAGTGTGGAAGAG+GGG | 0.654016 | 2_1:+62170266 | Msa0216380:CDS |
| GTAAGGTAGAGAAAGGAGTG+TGG | 0.664236 | 2_1:-62167808 | None:intergenic |
| CGTGACACCAATGCACAAGA+CGG | 0.665767 | 2_1:-62169922 | None:intergenic |
| CATGGAACTTAAGCCAGATG+AGG | 0.673066 | 2_1:+62169811 | Msa0216380:CDS |
| GTTGTCTCTGGCATGAATGG+TGG | 0.674768 | 2_1:-62167726 | None:intergenic |
| AGCCGTGTGACGTTCATCTG+TGG | 0.685914 | 2_1:+62169227 | Msa0216380:intron |
| CCTTTGATGTATGAATGGCA+TGG | 0.688871 | 2_1:+62169731 | Msa0216380:CDS |
| GATGAGGTGGAAGATGTCAA+GGG | 0.689281 | 2_1:+62169827 | Msa0216380:CDS |
| AAACAAGGAGTACTTGTACA+GGG | 0.691885 | 2_1:+62170367 | Msa0216380:CDS |
| GGTAGAAAATTAGCTCACAA+GGG | 0.710711 | 2_1:+62169701 | Msa0216380:CDS |
| GGACTATACGCTTTACACGG+GGG | 0.714635 | 2_1:+62168346 | Msa0216380:CDS |
| AGCCAAGGAAAGATGCATGG+AGG | 0.724314 | 2_1:+62170437 | Msa0216380:CDS |
| AAGGTGGTGAGTGAGACATG+GGG | 0.727439 | 2_1:+62168302 | Msa0216380:intron |
| AAAGCGTATAGTCCTTCACA+CGG | 0.761639 | 2_1:-62168337 | None:intergenic |
| TGGCATGGGAAGAAATACTG+GGG | 0.762911 | 2_1:+62169746 | Msa0216380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTCATTATAAAAAAAATAAA+GGG | - | chr2_1:62169998-62170017 | None:intergenic | 10.0% |
| !!! | AGAAAAAATGAAAATTTTTG+TGG | - | chr2_1:62167890-62167909 | None:intergenic | 15.0% |
| !!! | AAATTTTCATTTTTTCTTTG+TGG | + | chr2_1:62167893-62167912 | Msa0216380:intron | 15.0% |
| !!! | AATTTTCATTTTTTCTTTGT+GGG | + | chr2_1:62167894-62167913 | Msa0216380:intron | 15.0% |
| !!! | TTGTTTATGTATTACTTTTA+AGG | + | chr2_1:62168283-62168302 | Msa0216380:intron | 15.0% |
| !! | CCTCATTATAAAAAAAATAA+AGG | - | chr2_1:62169999-62170018 | None:intergenic | 15.0% |
| !!! | CCTTTATTTTTTTTATAATG+AGG | + | chr2_1:62169996-62170015 | Msa0216380:intron | 15.0% |
| !! | ATACATTTGTAATATACATA+CGG | - | chr2_1:62170586-62170605 | None:intergenic | 15.0% |
| !!! | CAATTTCTGTTTTTTCATTT+TGG | + | chr2_1:62167924-62167943 | Msa0216380:intron | 20.0% |
| !!! | TTTATGTATTACTTTTAAGG+TGG | + | chr2_1:62168286-62168305 | Msa0216380:intron | 20.0% |
| !! | TTCATCATAAACCATAAATT+TGG | - | chr2_1:62168772-62168791 | None:intergenic | 20.0% |
| !!! | TTATGATGAATTTTGAAACA+TGG | + | chr2_1:62168782-62168801 | Msa0216380:intron | 20.0% |
| !! | TATTAATTACGTTAAACAGA+TGG | - | chr2_1:62168820-62168839 | None:intergenic | 20.0% |
| !!! | TGTTAATATATTTTGTTGTC+TGG | + | chr2_1:62169024-62169043 | Msa0216380:intron | 20.0% |
| !! | AAACTTTGATTGTTCAATTT+AGG | - | chr2_1:62169142-62169161 | None:intergenic | 20.0% |
| !!! | AAATTAAAAGCCAATTTTCA+TGG | - | chr2_1:62169639-62169658 | None:intergenic | 20.0% |
| !! | CTAATTTCTTTACCATAATT+AGG | + | chr2_1:62170202-62170221 | Msa0216380:intron | 20.0% |
| !!! | TTTACCATAATTAGGTTTTT+GGG | + | chr2_1:62170210-62170229 | Msa0216380:intron | 20.0% |
| !!! | TCTGTTTTTTCATTTTGGTT+AGG | + | chr2_1:62167929-62167948 | Msa0216380:intron | 25.0% |
| !! | TGTGTTTTCTAATTCTTCTT+AGG | + | chr2_1:62168021-62168040 | Msa0216380:intron | 25.0% |
| ! | TGCAAAAATGCAATTCAATT+AGG | - | chr2_1:62168047-62168066 | None:intergenic | 25.0% |
| ! | TCACATAAATGCTTATGTAT+AGG | - | chr2_1:62168232-62168251 | None:intergenic | 25.0% |
| ! | TTTATGCTTGAAGATTGTTA+AGG | + | chr2_1:62168433-62168452 | Msa0216380:CDS | 25.0% |
| ! | GATTTCTGTACAATTAAATG+TGG | + | chr2_1:62168554-62168573 | Msa0216380:intron | 25.0% |
| ! | AATGCAATTTAGATGGTTTA+TGG | + | chr2_1:62168607-62168626 | Msa0216380:intron | 25.0% |
| ! | TAATGAAGTTACATTGGTAT+TGG | - | chr2_1:62168662-62168681 | None:intergenic | 25.0% |
| ! | AGTTGAACATCTGAAAATAA+TGG | - | chr2_1:62168708-62168727 | None:intergenic | 25.0% |
| ! | TTTATCCTTAGGATTAAGTT+AGG | + | chr2_1:62169074-62169093 | Msa0216380:intron | 25.0% |
| ! | TCCAATTTACACATGAATTT+CGG | + | chr2_1:62169383-62169402 | Msa0216380:intron | 25.0% |
| !!! | GTTAAACTTCTTTTTCGTAT+TGG | + | chr2_1:62169408-62169427 | Msa0216380:intron | 25.0% |
| ! | TCATTCTTAAACAAGCATAT+CGG | + | chr2_1:62169517-62169536 | Msa0216380:CDS | 25.0% |
| ! | AATAAAGGGAAATATTACCT+CGG | - | chr2_1:62169984-62170003 | None:intergenic | 25.0% |
| !! | CTTTACCATAATTAGGTTTT+TGG | + | chr2_1:62170209-62170228 | Msa0216380:intron | 25.0% |
| !! | TTACCATAATTAGGTTTTTG+GGG | + | chr2_1:62170211-62170230 | Msa0216380:intron | 25.0% |
| ! | CAAAATTTATTACATCTCCT+TGG | - | chr2_1:62170645-62170664 | None:intergenic | 25.0% |
| CTTAAAGACATGTCATAAGT+TGG | - | chr2_1:62168100-62168119 | None:intergenic | 30.0% | |
| ! | TTTAAAACTACGCCTTACAA+CGG | - | chr2_1:62168526-62168545 | None:intergenic | 30.0% |
| AGTGGTTAATGCAATTTAGA+TGG | + | chr2_1:62168600-62168619 | Msa0216380:intron | 30.0% | |
| AGATGGTTTATGGATATATC+AGG | + | chr2_1:62168617-62168636 | Msa0216380:intron | 30.0% | |
| TGTGGTTAATGAAGTTACAT+TGG | - | chr2_1:62168668-62168687 | None:intergenic | 30.0% | |
| ATTAACCACAAATTTGAACG+TGG | + | chr2_1:62168678-62168697 | Msa0216380:intron | 30.0% | |
| ATTTGAACACCTGGAAATTA+TGG | + | chr2_1:62168736-62168755 | Msa0216380:intron | 30.0% | |
| TACGTTAAACAGATGGTTTA+TGG | - | chr2_1:62168813-62168832 | None:intergenic | 30.0% | |
| CATTTCCTAACTTAATCCTA+AGG | - | chr2_1:62169082-62169101 | None:intergenic | 30.0% | |
| CTTAGGATTAAGTTAGGAAA+TGG | + | chr2_1:62169080-62169099 | Msa0216380:intron | 30.0% | |
| TTACCTTAGACAATTCAAAG+AGG | + | chr2_1:62169319-62169338 | Msa0216380:CDS | 30.0% | |
| ATACCTCTTTGAATTGTCTA+AGG | - | chr2_1:62169325-62169344 | None:intergenic | 30.0% | |
| CCAATTTACACATGAATTTC+GGG | + | chr2_1:62169384-62169403 | Msa0216380:intron | 30.0% | |
| !!! | CGTATTGGTGCTTTTATTTT+TGG | + | chr2_1:62169423-62169442 | Msa0216380:intron | 30.0% |
| ! | TTTTTGACAGAAACCAATTG+TGG | + | chr2_1:62169661-62169680 | Msa0216380:intron | 30.0% |
| GTTATAACTTCATCCACAAT+TGG | - | chr2_1:62169677-62169696 | None:intergenic | 30.0% | |
| ! | AGGAATTATGAACGTTTTGA+TGG | + | chr2_1:62169787-62169806 | Msa0216380:CDS | 30.0% |
| ATTAAAAATCGTTTCTCGAG+TGG | + | chr2_1:62169866-62169885 | Msa0216380:CDS | 30.0% | |
| CTGAAGCTTGTATTTGAATA+TGG | - | chr2_1:62170040-62170059 | None:intergenic | 30.0% | |
| CATATTCAAATACAAGCTTC+AGG | + | chr2_1:62170038-62170057 | Msa0216380:intron | 30.0% | |
| TCAGGTTTGTGCAAATTTAT+CGG | - | chr2_1:62170088-62170107 | None:intergenic | 30.0% | |
| ! | ATTTTGCAGTGTTCATTGTA+TGG | + | chr2_1:62170117-62170136 | Msa0216380:intron | 30.0% |
| TATCCCCAAAAACCTAATTA+TGG | - | chr2_1:62170217-62170236 | None:intergenic | 30.0% | |
| !! | ATAATTAGGTTTTTGGGGAT+AGG | + | chr2_1:62170216-62170235 | Msa0216380:intron | 30.0% |
| !! | TAATTAGGTTTTTGGGGATA+GGG | + | chr2_1:62170217-62170236 | Msa0216380:intron | 30.0% |
| TATACCTTTCTAGACATGAT+TGG | + | chr2_1:62170503-62170522 | Msa0216380:CDS | 30.0% | |
| ! | AAACTGCAAATTTTGAACTG+TGG | + | chr2_1:62170680-62170699 | Msa0216380:three_prime_UTR | 30.0% |
| AGCACTTCACTTCAAACAAT+TGG | + | chr2_1:62167860-62167879 | Msa0216380:CDS | 35.0% | |
| CAAGTTAGAAACTTTCACGT+TGG | + | chr2_1:62167954-62167973 | Msa0216380:intron | 35.0% | |
| TTTCACGTTGGTGCAATAAT+GGG | + | chr2_1:62167966-62167985 | Msa0216380:intron | 35.0% | |
| !! | AACGGCATACTTGGTTTTTA+AGG | + | chr2_1:62168376-62168395 | Msa0216380:CDS | 35.0% |
| ACTAAGATCATCCACATTCT+TGG | - | chr2_1:62168414-62168433 | None:intergenic | 35.0% | |
| ATTCTGCTTCAGCAAATTCA+AGG | + | chr2_1:62168462-62168481 | Msa0216380:CDS | 35.0% | |
| TACTCTCTATTTCATGCATC+TGG | + | chr2_1:62168485-62168504 | Msa0216380:intron | 35.0% | |
| TTAAATGTGGACAACTTTCG+CGG | + | chr2_1:62168567-62168586 | Msa0216380:intron | 35.0% | |
| !! | TTTCGCGGTAACTTTTTAAG+TGG | + | chr2_1:62168582-62168601 | Msa0216380:intron | 35.0% |
| ! | TGAAGTTACATTGGTATTGG+TGG | - | chr2_1:62168659-62168678 | None:intergenic | 35.0% |
| GTTAACCACGTTCAAATTTG+TGG | - | chr2_1:62168686-62168705 | None:intergenic | 35.0% | |
| GTCGATGACATCCAAATTTA+TGG | + | chr2_1:62168758-62168777 | Msa0216380:intron | 35.0% | |
| TTGGCTACAACTTCTATAAG+TGG | - | chr2_1:62168862-62168881 | None:intergenic | 35.0% | |
| CAACGAAATTTAGACAGCTT+TGG | - | chr2_1:62168881-62168900 | None:intergenic | 35.0% | |
| ATTTGCTCGTGTTTATCCTT+AGG | + | chr2_1:62169063-62169082 | Msa0216380:intron | 35.0% | |
| ATCAAAGTTTCAGCCTGAAA+TGG | + | chr2_1:62169152-62169171 | Msa0216380:intron | 35.0% | |
| TCAAAGTTTCAGCCTGAAAT+GGG | + | chr2_1:62169153-62169172 | Msa0216380:intron | 35.0% | |
| CCCGAAATTCATGTGTAAAT+TGG | - | chr2_1:62169387-62169406 | None:intergenic | 35.0% | |
| TTGCCCTATGAGTTATTGTA+TGG | + | chr2_1:62169469-62169488 | Msa0216380:CDS | 35.0% | |
| CTGCCATACAATAACTCATA+GGG | - | chr2_1:62169475-62169494 | None:intergenic | 35.0% | |
| TCTGCCATACAATAACTCAT+AGG | - | chr2_1:62169476-62169495 | None:intergenic | 35.0% | |
| AAGGCATATGTTCTTCATCA+TGG | + | chr2_1:62169570-62169589 | Msa0216380:intron | 35.0% | |
| TGGTAGAAAATTAGCTCACA+AGG | + | chr2_1:62169700-62169719 | Msa0216380:CDS | 35.0% | |
| GGTAGAAAATTAGCTCACAA+GGG | + | chr2_1:62169701-62169720 | Msa0216380:CDS | 35.0% | |
| GATGTCCTTTGATGTATGAA+TGG | + | chr2_1:62169726-62169745 | Msa0216380:CDS | 35.0% | |
| CTTTGATGTATGAATGGCAT+GGG | + | chr2_1:62169732-62169751 | Msa0216380:CDS | 35.0% | |
| !! | TATGAACGTTTTGATGGACA+TGG | + | chr2_1:62169793-62169812 | Msa0216380:CDS | 35.0% |
| !! | TCCTTTACATCGTATTGACT+CGG | - | chr2_1:62170064-62170083 | None:intergenic | 35.0% |
| GTACAGAGAAAGAAAGACAT+AGG | - | chr2_1:62170336-62170355 | None:intergenic | 35.0% | |
| !! | AAACAAGGAGTACTTGTACA+GGG | + | chr2_1:62170367-62170386 | Msa0216380:CDS | 35.0% |
| GACCTTCGAATAAGGAATAA+GGG | - | chr2_1:62170469-62170488 | None:intergenic | 35.0% | |
| AGACCTTCGAATAAGGAATA+AGG | - | chr2_1:62170470-62170489 | None:intergenic | 35.0% | |
| TATTCCTTATTCGAAGGTCT+TGG | + | chr2_1:62170470-62170489 | Msa0216380:CDS | 35.0% | |
| !! | TGATATATTGCGTGGTTTTG+AGG | - | chr2_1:62170617-62170636 | None:intergenic | 35.0% |
| TCAAAACCACGCAATATATC+AGG | + | chr2_1:62170616-62170635 | Msa0216380:three_prime_UTR | 35.0% | |
| AAAGAGTAAACTGTGATGCA+CGG | + | chr2_1:62170728-62170747 | Msa0216380:three_prime_UTR | 35.0% | |
| TGTTTATCGACCTCTCTAGA+CGG | + | chr2_1:62167650-62167669 | Msa0216380:five_prime_UTR | 40.0% | |
| AAAAACCGATCAGACATCTC+CGG | - | chr2_1:62167693-62167712 | None:intergenic | 40.0% | |
| ATGAATGGTGGCAAGTTGTT+CGG | - | chr2_1:62167717-62167736 | None:intergenic | 40.0% | |
| ! | TGTTCTTCAAGTGTTGTCTC+TGG | - | chr2_1:62167741-62167760 | None:intergenic | 40.0% |
| GTGTTTGGTAAGGTAGAGAA+AGG | - | chr2_1:62167818-62167837 | None:intergenic | 40.0% | |
| ! | TTTGAGGTGAGTGTTTGGTA+AGG | - | chr2_1:62167828-62167847 | None:intergenic | 40.0% |
| !!! | GTAGTTTTGAGGTGAGTGTT+TGG | - | chr2_1:62167833-62167852 | None:intergenic | 40.0% |
| !! | TGCTGTAGCTTGTAGTTTTG+AGG | - | chr2_1:62167844-62167863 | None:intergenic | 40.0% |
| CTTTCACGTTGGTGCAATAA+TGG | + | chr2_1:62167965-62167984 | Msa0216380:intron | 40.0% | |
| AAAGCGTATAGTCCTTCACA+CGG | - | chr2_1:62168340-62168359 | None:intergenic | 40.0% | |
| GAAGGACTATACGCTTTACA+CGG | + | chr2_1:62168343-62168362 | Msa0216380:CDS | 40.0% | |
| AAGGACTATACGCTTTACAC+GGG | + | chr2_1:62168344-62168363 | Msa0216380:CDS | 40.0% | |
| CTACCAAGTAACCAAGAATG+TGG | + | chr2_1:62168400-62168419 | Msa0216380:CDS | 40.0% | |
| CATCCACATTCTTGGTTACT+TGG | - | chr2_1:62168406-62168425 | None:intergenic | 40.0% | |
| GACTTAACTTAGCCGTTGTA+AGG | + | chr2_1:62168511-62168530 | Msa0216380:intron | 40.0% | |
| TCCATGTAGATTTGAACACC+TGG | + | chr2_1:62168727-62168746 | Msa0216380:intron | 40.0% | |
| TCCAGGTGTTCAAATCTACA+TGG | - | chr2_1:62168731-62168750 | None:intergenic | 40.0% | |
| TGTCATCGACCATAATTTCC+AGG | - | chr2_1:62168748-62168767 | None:intergenic | 40.0% | |
| GTGGTTAATGCACTTCGAAT+AGG | - | chr2_1:62168843-62168862 | None:intergenic | 40.0% | |
| AACTCATAGGGCAAATCAGT+GGG | - | chr2_1:62169463-62169482 | None:intergenic | 40.0% | |
| TAACTCATAGGGCAAATCAG+TGG | - | chr2_1:62169464-62169483 | None:intergenic | 40.0% | |
| GAGTTATTGTATGGCAGAAC+AGG | + | chr2_1:62169478-62169497 | Msa0216380:CDS | 40.0% | |
| ATGGCAGAACAGGTTACTTA+TGG | + | chr2_1:62169488-62169507 | Msa0216380:CDS | 40.0% | |
| TGGCAGAACAGGTTACTTAT+GGG | + | chr2_1:62169489-62169508 | Msa0216380:CDS | 40.0% | |
| !! | TGTCGACTTGCCATGAAAAT+TGG | + | chr2_1:62169626-62169645 | Msa0216380:intron | 40.0% |
| GTGGATGAAGTTATAACAGC+TGG | + | chr2_1:62169680-62169699 | Msa0216380:CDS | 40.0% | |
| CCATGCCATTCATACATCAA+AGG | - | chr2_1:62169734-62169753 | None:intergenic | 40.0% | |
| CCTTTGATGTATGAATGGCA+TGG | + | chr2_1:62169731-62169750 | Msa0216380:CDS | 40.0% | |
| AATGGCATGGGAAGAAATAC+TGG | + | chr2_1:62169744-62169763 | Msa0216380:CDS | 40.0% | |
| ATGGCATGGGAAGAAATACT+GGG | + | chr2_1:62169745-62169764 | Msa0216380:CDS | 40.0% | |
| TTGCACAAACCTGATTGCAA+TGG | + | chr2_1:62170094-62170113 | Msa0216380:intron | 40.0% | |
| CTGCAAAATCCATTGCAATC+AGG | - | chr2_1:62170106-62170125 | None:intergenic | 40.0% | |
| CTTTCTCTGTACAGATTGAC+AGG | + | chr2_1:62170344-62170363 | Msa0216380:CDS | 40.0% | |
| GTACAGATTGACAGGAAACA+AGG | + | chr2_1:62170352-62170371 | Msa0216380:CDS | 40.0% | |
| !! | GAAACAAGGAGTACTTGTAC+AGG | + | chr2_1:62170366-62170385 | Msa0216380:CDS | 40.0% |
| TGGACCAATCATGTCTAGAA+AGG | - | chr2_1:62170510-62170529 | None:intergenic | 40.0% | |
| TGACTCAAAGTTCATAGCCA+GGG | - | chr2_1:62170547-62170566 | None:intergenic | 40.0% | |
| GGTAACTGTCTGTCTTTAGC+CGG | + | chr2_1:62167671-62167690 | Msa0216380:five_prime_UTR | 45.0% | |
| TTTAGCCGGAGATGTCTGAT+CGG | + | chr2_1:62167685-62167704 | Msa0216380:exon | 45.0% | |
| AGTGTTGTCTCTGGCATGAA+TGG | - | chr2_1:62167732-62167751 | None:intergenic | 45.0% | |
| !! | TGGTGTTGGTGTTTGAGAAG+AGG | - | chr2_1:62167778-62167797 | None:intergenic | 45.0% |
| GTAAGGTAGAGAAAGGAGTG+TGG | - | chr2_1:62167811-62167830 | None:intergenic | 45.0% | |
| !! | ACGTTGGTGCAATAATGGGT+CGG | + | chr2_1:62167970-62167989 | Msa0216380:intron | 45.0% |
| TTAAGGTGGTGAGTGAGACA+TGG | + | chr2_1:62168300-62168319 | Msa0216380:intron | 45.0% | |
| TAAGGTGGTGAGTGAGACAT+GGG | + | chr2_1:62168301-62168320 | Msa0216380:intron | 45.0% | |
| AGGACTATACGCTTTACACG+GGG | + | chr2_1:62168345-62168364 | Msa0216380:CDS | 45.0% | |
| AAGTTTCAGCCTGAAATGGG+AGG | + | chr2_1:62169156-62169175 | Msa0216380:intron | 45.0% | |
| AAATGGGAGGATGGGAAGTA+AGG | + | chr2_1:62169169-62169188 | Msa0216380:intron | 45.0% | |
| GCTGTTATAGCTAAGCAAGC+TGG | + | chr2_1:62169275-62169294 | Msa0216380:CDS | 45.0% | |
| CACAATACCCACTACCTACA+CGG | + | chr2_1:62169546-62169565 | Msa0216380:CDS | 45.0% | |
| GAACATATGCCTTACCGTGT+AGG | - | chr2_1:62169563-62169582 | None:intergenic | 45.0% | |
| TGGCATGGGAAGAAATACTG+GGG | + | chr2_1:62169746-62169765 | Msa0216380:CDS | 45.0% | |
| CATGGAACTTAAGCCAGATG+AGG | + | chr2_1:62169811-62169830 | Msa0216380:CDS | 45.0% | |
| TTGACATCTTCCACCTCATC+TGG | - | chr2_1:62169827-62169846 | None:intergenic | 45.0% | |
| AGATGAGGTGGAAGATGTCA+AGG | + | chr2_1:62169826-62169845 | Msa0216380:CDS | 45.0% | |
| GATGAGGTGGAAGATGTCAA+GGG | + | chr2_1:62169827-62169846 | Msa0216380:CDS | 45.0% | |
| GATTCACTTCCTTCACTGGA+GGG | - | chr2_1:62169899-62169918 | None:intergenic | 45.0% | |
| AGATTCACTTCCTTCACTGG+AGG | - | chr2_1:62169900-62169919 | None:intergenic | 45.0% | |
| GTCAGATTCACTTCCTTCAC+TGG | - | chr2_1:62169903-62169922 | None:intergenic | 45.0% | |
| AATCTGACCGTCTTGTGCAT+TGG | + | chr2_1:62169915-62169934 | Msa0216380:CDS | 45.0% | |
| ACAAGCGTAAGAGTTACTCC+AGG | - | chr2_1:62169953-62169972 | None:intergenic | 45.0% | |
| GCCGAGTCAATACGATGTAA+AGG | + | chr2_1:62170060-62170079 | Msa0216380:intron | 45.0% | |
| AAGATGCTGGAGAAGTAGTG+TGG | + | chr2_1:62170258-62170277 | Msa0216380:CDS | 45.0% | |
| TGGAGAAGTAGTGTGGAAGA+GGG | + | chr2_1:62170265-62170284 | Msa0216380:CDS | 45.0% | |
| ! | AAGCGAGTTGGAATTTGCCA+CGG | + | chr2_1:62170296-62170315 | Msa0216380:CDS | 45.0% |
| GAGTACTTGTACAGGGCTAA+AGG | + | chr2_1:62170374-62170393 | Msa0216380:CDS | 45.0% | |
| ATCAGCCAAGGAAAGATGCA+TGG | + | chr2_1:62170434-62170453 | Msa0216380:CDS | 45.0% | |
| CGCCCTTATTCCTTATTCGA+AGG | + | chr2_1:62170464-62170483 | Msa0216380:CDS | 45.0% | |
| TCCTTATTCGAAGGTCTTGG+AGG | + | chr2_1:62170473-62170492 | Msa0216380:CDS | 45.0% | |
| TCCTCCAAGACCTTCGAATA+AGG | - | chr2_1:62170477-62170496 | None:intergenic | 45.0% | |
| ATTCGAAGGTCTTGGAGGAA+TGG | + | chr2_1:62170478-62170497 | Msa0216380:CDS | 45.0% | |
| ! | AGACATGATTGGTCCACAAG+TGG | + | chr2_1:62170514-62170533 | Msa0216380:CDS | 45.0% |
| GTGACTCAAAGTTCATAGCC+AGG | - | chr2_1:62170548-62170567 | None:intergenic | 45.0% | |
| TGGCAACCTGATATATTGCG+TGG | - | chr2_1:62170625-62170644 | None:intergenic | 45.0% | |
| ! | CGCAATATATCAGGTTGCCA+AGG | + | chr2_1:62170625-62170644 | Msa0216380:three_prime_UTR | 45.0% |
| CAGACAGTTACCGTCTAGAG+AGG | - | chr2_1:62167663-62167682 | None:intergenic | 50.0% | |
| GTTGTCTCTGGCATGAATGG+TGG | - | chr2_1:62167729-62167748 | None:intergenic | 50.0% | |
| GTGGTGAGAGAATGTGGTGT+TGG | - | chr2_1:62167792-62167811 | None:intergenic | 50.0% | |
| ! | AGGAGTGTGGTGAGAGAATG+TGG | - | chr2_1:62167798-62167817 | None:intergenic | 50.0% |
| AAGGTGGTGAGTGAGACATG+GGG | + | chr2_1:62168302-62168321 | Msa0216380:intron | 50.0% | |
| ! | AGTGAGACATGGGGTTCTAG+TGG | + | chr2_1:62168311-62168330 | Msa0216380:CDS | 50.0% |
| ! | GTGAGACATGGGGTTCTAGT+GGG | + | chr2_1:62168312-62168331 | Msa0216380:CDS | 50.0% |
| TTCTAGTGGGAACCGTGTGA+AGG | + | chr2_1:62168325-62168344 | Msa0216380:CDS | 50.0% | |
| GGACTATACGCTTTACACGG+GGG | + | chr2_1:62168346-62168365 | Msa0216380:CDS | 50.0% | |
| TTACACGGGGGTTCTTGGAA+CGG | + | chr2_1:62168358-62168377 | Msa0216380:CDS | 50.0% | |
| GGTTCTTGGAACGGCATACT+TGG | + | chr2_1:62168367-62168386 | Msa0216380:CDS | 50.0% | |
| TTCAGCCTGAAATGGGAGGA+TGG | + | chr2_1:62169160-62169179 | Msa0216380:intron | 50.0% | |
| TCAGCCTGAAATGGGAGGAT+GGG | + | chr2_1:62169161-62169180 | Msa0216380:intron | 50.0% | |
| ACTTCCCATCCTCCCATTTC+AGG | - | chr2_1:62169168-62169187 | None:intergenic | 50.0% | |
| ! | AGCACCAAGAGCACAAACAC+CGG | - | chr2_1:62169258-62169277 | None:intergenic | 50.0% |
| TACCCACTACCTACACGGTA+AGG | + | chr2_1:62169551-62169570 | Msa0216380:intron | 50.0% | |
| TGCCTTACCGTGTAGGTAGT+GGG | - | chr2_1:62169556-62169575 | None:intergenic | 50.0% | |
| ATGCCTTACCGTGTAGGTAG+TGG | - | chr2_1:62169557-62169576 | None:intergenic | 50.0% | |
| !! | AAATACTGGGGTGCTGCTCA+TGG | + | chr2_1:62169758-62169777 | Msa0216380:CDS | 50.0% |
| GGAACTTAAGCCAGATGAGG+TGG | + | chr2_1:62169814-62169833 | Msa0216380:CDS | 50.0% | |
| GGCAATTATCCCTCCAGTGA+AGG | + | chr2_1:62169887-62169906 | Msa0216380:CDS | 50.0% | |
| CGTGACACCAATGCACAAGA+CGG | - | chr2_1:62169925-62169944 | None:intergenic | 50.0% | |
| !! | CGTCTTGTGCATTGGTGTCA+CGG | + | chr2_1:62169923-62169942 | Msa0216380:CDS | 50.0% |
| TACGCTTGTAAAAGCAGCCG+AGG | + | chr2_1:62169964-62169983 | Msa0216380:CDS | 50.0% | |
| CTGGAGAAGTAGTGTGGAAG+AGG | + | chr2_1:62170264-62170283 | Msa0216380:CDS | 50.0% | |
| GGAGAAGTAGTGTGGAAGAG+GGG | + | chr2_1:62170266-62170285 | Msa0216380:CDS | 50.0% | |
| AGGGGTCTTCTTAAGCGAGT+TGG | + | chr2_1:62170284-62170303 | Msa0216380:CDS | 50.0% | |
| GAATTTGCCACGGCATCAGT+GGG | + | chr2_1:62170306-62170325 | Msa0216380:CDS | 50.0% | |
| GCGCAAGAATTGATCAGCCA+AGG | + | chr2_1:62170422-62170441 | Msa0216380:CDS | 50.0% | |
| AGCCAAGGAAAGATGCATGG+AGG | + | chr2_1:62170437-62170456 | Msa0216380:CDS | 50.0% | |
| CTCCTCCATGCATCTTTCCT+TGG | - | chr2_1:62170442-62170461 | None:intergenic | 50.0% | |
| ! | TGATTGGTCCACAAGTGGCT+AGG | + | chr2_1:62170519-62170538 | Msa0216380:CDS | 50.0% |
| ACGCTTTACACGGGGGTTCT+TGG | + | chr2_1:62168353-62168372 | Msa0216380:CDS | 55.0% | |
| TGGGAGGATGGGAAGTAAGG+TGG | + | chr2_1:62169172-62169191 | Msa0216380:intron | 55.0% | |
| AGCCGTGTGACGTTCATCTG+TGG | + | chr2_1:62169227-62169246 | Msa0216380:intron | 55.0% | |
| GGCCACAGATGAACGTCACA+CGG | - | chr2_1:62169232-62169251 | None:intergenic | 55.0% | |
| ! | CAAGAGCACAAACACCGGCA+CGG | - | chr2_1:62169253-62169272 | None:intergenic | 55.0% |
| TCGCAAGCAGCAGAAGATGC+TGG | + | chr2_1:62170245-62170264 | Msa0216380:CDS | 55.0% | |
| GGAATTTGCCACGGCATCAG+TGG | + | chr2_1:62170305-62170324 | Msa0216380:CDS | 55.0% | |
| ACGTTCATCTGTGGCCGTGC+CGG | + | chr2_1:62169236-62169255 | Msa0216380:CDS | 60.0% | |
| ! | CGTGCCGGTGTTTGTGCTCT+TGG | + | chr2_1:62169251-62169270 | Msa0216380:CDS | 60.0% |
| !! | GGTGCTGCTCATGGACTTGC+AGG | + | chr2_1:62169767-62169786 | Msa0216380:CDS | 60.0% |
| !! | CATTGGTGTCACGGTGCTCC+TGG | + | chr2_1:62169932-62169951 | Msa0216380:CDS | 60.0% |
| AGGTGTTCCCACTGATGCCG+TGG | - | chr2_1:62170316-62170335 | None:intergenic | 60.0% | |
| CCAGGGAACCTAGCCACTTG+TGG | - | chr2_1:62170530-62170549 | None:intergenic | 60.0% | |
| CCACAAGTGGCTAGGTTCCC+TGG | + | chr2_1:62170527-62170546 | Msa0216380:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 62167636 | 62170757 | 62167636 | ID=Msa0216380;Name=Msa0216380 |
| chr2_1 | mRNA | 62167636 | 62170757 | 62167636 | ID=Msa0216380-mRNA-1;Parent=Msa0216380;Name=Msa0216380-mRNA-1;_AED=0.11;_eAED=0.11;_QI=60|1|1|1|1|1|6|195|415 |
| chr2_1 | exon | 62167636 | 62167881 | 62167636 | ID=Msa0216380-mRNA-1:exon:17207;Parent=Msa0216380-mRNA-1 |
| chr2_1 | exon | 62168305 | 62168483 | 62168305 | ID=Msa0216380-mRNA-1:exon:17208;Parent=Msa0216380-mRNA-1 |
| chr2_1 | exon | 62169229 | 62169340 | 62169229 | ID=Msa0216380-mRNA-1:exon:17209;Parent=Msa0216380-mRNA-1 |
| chr2_1 | exon | 62169451 | 62169567 | 62169451 | ID=Msa0216380-mRNA-1:exon:17210;Parent=Msa0216380-mRNA-1 |
| chr2_1 | exon | 62169671 | 62169985 | 62169671 | ID=Msa0216380-mRNA-1:exon:17211;Parent=Msa0216380-mRNA-1 |
| chr2_1 | exon | 62170224 | 62170757 | 62170224 | ID=Msa0216380-mRNA-1:exon:17212;Parent=Msa0216380-mRNA-1 |
| chr2_1 | five_prime_UTR | 62167636 | 62167695 | 62167636 | ID=Msa0216380-mRNA-1:five_prime_utr;Parent=Msa0216380-mRNA-1 |
| chr2_1 | CDS | 62167696 | 62167881 | 62167696 | ID=Msa0216380-mRNA-1:cds;Parent=Msa0216380-mRNA-1 |
| chr2_1 | CDS | 62168305 | 62168483 | 62168305 | ID=Msa0216380-mRNA-1:cds;Parent=Msa0216380-mRNA-1 |
| chr2_1 | CDS | 62169229 | 62169340 | 62169229 | ID=Msa0216380-mRNA-1:cds;Parent=Msa0216380-mRNA-1 |
| chr2_1 | CDS | 62169451 | 62169567 | 62169451 | ID=Msa0216380-mRNA-1:cds;Parent=Msa0216380-mRNA-1 |
| chr2_1 | CDS | 62169671 | 62169985 | 62169671 | ID=Msa0216380-mRNA-1:cds;Parent=Msa0216380-mRNA-1 |
| chr2_1 | CDS | 62170224 | 62170562 | 62170224 | ID=Msa0216380-mRNA-1:cds;Parent=Msa0216380-mRNA-1 |
| chr2_1 | three_prime_UTR | 62170563 | 62170757 | 62170563 | ID=Msa0216380-mRNA-1:three_prime_utr;Parent=Msa0216380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
