AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0216970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216970 MtrunA17_Chr2g0318671 95.761 802 11 2 1 779 1 802 0.0 1588
Msa0216970 MtrunA17_Chr4g0039481 58.036 112 38 3 355 461 101 208 5.85e-29 115
Msa0216970 MtrunA17_Chr4g0039491 63.636 66 24 0 714 779 64 129 1.68e-23 96.7
Msa0216970 MtrunA17_Chr4g0039491 70.000 60 17 1 523 582 1 59 6.05e-19 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216970 AT3G20630.1 73.756 804 178 6 1 779 1 796 0.0 1234

Find 218 sgRNAs with CRISPR-Local

Find 643 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTCAAAATTGGTATTT+TGG 0.154188 2_1:+63181023 None:intergenic
TGCAGAAAGCTTCGAGATTT+TGG 0.154399 2_1:+63185761 None:intergenic
AGAAAGCTCACCGCAGATTT+AGG 0.157334 2_1:+63180154 None:intergenic
CCACTTCCTGCCCACTTTCT+TGG 0.161699 2_1:+63180993 None:intergenic
TAGACGCGATTGGTGGGTTC+TGG 0.186615 2_1:+63185682 None:intergenic
TGTTTCACAGCTGGTTTCTA+TGG 0.210475 2_1:-63177152 Msa0216970:CDS
TCTTTCTTTCAGTTGTTATT+TGG 0.220648 2_1:-63180843 Msa0216970:intron
GATTCTATTCCATTCAAAAT+TGG 0.229016 2_1:+63181015 None:intergenic
ATTGCAATTTCGTTATTAAT+AGG 0.229786 2_1:-63175973 Msa0216970:three_prime_UTR
CAATTAGTGTTTCGTATCTT+TGG 0.241053 2_1:+63185834 None:intergenic
CACATTCTCAGTTCCTAAAA+TGG 0.264456 2_1:+63176018 None:intergenic
GGCTGGTCTGACATCATTTC+CGG 0.268886 2_1:-63177930 Msa0216970:CDS
TTGAGAAATTTCAGAAGAAT+TGG 0.277779 2_1:-63178846 Msa0216970:intron
CAGCACGATCTTTCTCTTCA+AGG 0.285617 2_1:-63180796 Msa0216970:intron
GTCTTGGTCGCTTGTTAAAC+TGG 0.286123 2_1:-63176090 Msa0216970:three_prime_UTR
TTCCACAGGATATCGACTTA+TGG 0.286341 2_1:-63176359 Msa0216970:intron
GAAAGCTCACCGCAGATTTA+GGG 0.309690 2_1:+63180155 None:intergenic
TTCTTCAAAGGCCTGTCTTC+CGG 0.312227 2_1:+63185367 None:intergenic
TCCACAGGATATCGACTTAT+GGG 0.329168 2_1:-63176358 Msa0216970:intron
ATATCCTTCTGTGGAATTAC+CGG 0.332484 2_1:-63184416 Msa0216970:CDS
GTTGATATGCTACTTTCATT+TGG 0.336414 2_1:-63176883 Msa0216970:CDS
CATGTCCTTGGGAGGATTAA+TGG 0.341823 2_1:+63176231 None:intergenic
GTGACAAGACAGACAATCTT+TGG 0.355394 2_1:-63184093 Msa0216970:CDS
GACATCATTTCCGGATTATC+TGG 0.361596 2_1:-63177921 Msa0216970:CDS
ACATCTTGAAAGATGGTAGA+TGG 0.364517 2_1:-63176285 Msa0216970:CDS
CTTTGAAAAGACTGGAAATC+CGG 0.366390 2_1:-63185425 Msa0216970:CDS
GGGAGCATTTCCACCCAGTT+GGG 0.379352 2_1:+63184119 None:intergenic
GAAAAGTTGCATACAATAGA+AGG 0.386707 2_1:-63178996 Msa0216970:CDS
CGGAACTATTACTGCTGATC+TGG 0.387196 2_1:-63183954 Msa0216970:CDS
CAAATGCCTTCTTTAGACTT+TGG 0.387309 2_1:+63180682 None:intergenic
CTTGCACATGGTTTACTGTC+TGG 0.392484 2_1:-63180312 Msa0216970:CDS
CCAAACTTGAAACTCCTTGC+GGG 0.398914 2_1:+63179048 None:intergenic
CTTGTTAAACTGGCCCTCAT+TGG 0.399682 2_1:-63176080 Msa0216970:three_prime_UTR
AAACCTACCCTATTGGCTAT+AGG 0.404548 2_1:-63185346 Msa0216970:intron
TTTGAAGAAACCTACCCTAT+TGG 0.404950 2_1:-63185353 Msa0216970:CDS
CCCGCAAGGAGTTTCAAGTT+TGG 0.407324 2_1:-63179048 Msa0216970:CDS
TGACTGATATCAATGATATC+AGG 0.409150 2_1:+63177745 None:intergenic
GCACATGCGCAAATTTGTTA+TGG 0.413937 2_1:-63177894 Msa0216970:CDS
AACATTTCAACTTTGTAAAG+AGG 0.415872 2_1:-63176141 Msa0216970:three_prime_UTR
GAAGACGAAGAAGCCGGTTC+CGG 0.419600 2_1:-63185386 Msa0216970:CDS
AGAGCCACGCCCTCTCGAAA+TGG 0.421013 2_1:+63176927 None:intergenic
TCGGATAAATCAGCATCATT+TGG 0.421423 2_1:+63176610 None:intergenic
AGACGCGATTGGTGGGTTCT+GGG 0.423164 2_1:+63185683 None:intergenic
GTAAAGATAGCCCATGTCCT+TGG 0.425428 2_1:+63176219 None:intergenic
TGATTTCTCATCACTACAAA+AGG 0.427517 2_1:-63181931 Msa0216970:intron
AAAGGCCTGTCTTCCGGAAC+CGG 0.427653 2_1:+63185373 None:intergenic
TGGAATAGAATCCAAGAAAG+TGG 0.428006 2_1:-63181004 Msa0216970:CDS
ACTGATGGAGTGATCCTTTG+TGG 0.429861 2_1:-63184061 Msa0216970:CDS
TTCTTCACATGCAAATAAAC+CGG 0.433166 2_1:+63185406 None:intergenic
AACGAAGTCACCAGTTGGTT+GGG 0.436215 2_1:-63175890 Msa0216970:three_prime_UTR
AACACAAACCTATAGCCAAT+AGG 0.436243 2_1:+63185338 None:intergenic
GAAACACTAATTGATCGGTT+AGG 0.441153 2_1:-63185824 Msa0216970:five_prime_UTR
TGCATTTGGGAAGGATTATG+TGG 0.443375 2_1:-63185455 Msa0216970:CDS
TGTTAGTTGCTTCATGCAAT+GGG 0.443599 2_1:+63178947 None:intergenic
TGTCGCATAGTAGAAAATTC+CGG 0.445319 2_1:+63179609 None:intergenic
GTTTCACAGCTGGTTTCTAT+GGG 0.445621 2_1:-63177151 Msa0216970:CDS
GATTGGTCAATCTAGGAAAC+AGG 0.446646 2_1:-63180943 Msa0216970:intron
CGTAGCAAAGGTCATCAACC+TGG 0.446947 2_1:-63177718 Msa0216970:CDS
TATGCATCTGTAGGTATTGA+TGG 0.447383 2_1:-63184514 Msa0216970:intron
AAACACTAATTGATCGGTTA+GGG 0.453238 2_1:-63185823 Msa0216970:five_prime_UTR
TTGTTAGTTGCTTCATGCAA+TGG 0.453282 2_1:+63178946 None:intergenic
TTGCACATGGTTTACTGTCT+GGG 0.459136 2_1:-63180311 Msa0216970:CDS
GAGCCACGCCCTCTCGAAAT+GGG 0.459446 2_1:+63176928 None:intergenic
TAAAATTGCTCCCTTTGTCT+TGG 0.460236 2_1:-63176106 Msa0216970:three_prime_UTR
ACACAAACCTATAGCCAATA+GGG 0.461237 2_1:+63185339 None:intergenic
AGTGTATTCTCCCAACCAAC+TGG 0.464041 2_1:+63175880 None:intergenic
CAAGTGGAGCGTGCTAATGC+TGG 0.464682 2_1:-63179087 Msa0216970:intron
CTGTGAAACAATGTCTTCAT+TGG 0.465041 2_1:+63177165 None:intergenic
CTTTGGTTAAATTTGACTGA+TGG 0.465186 2_1:-63184076 Msa0216970:CDS
ATTGTCTGTCTTGTCACATT+GGG 0.467678 2_1:+63184099 None:intergenic
GATCGTATCTTGTGTTCATC+GGG 0.468245 2_1:-63179018 Msa0216970:CDS
TTGCTTGTAGACGCGATTGG+TGG 0.470730 2_1:+63185675 None:intergenic
TAAAGATAGCCCATGTCCTT+GGG 0.473415 2_1:+63176220 None:intergenic
ACTGCATCAAACACTACATC+TGG 0.478137 2_1:-63176634 Msa0216970:CDS
TGAAGACATTGTTTCACAGC+TGG 0.478207 2_1:-63177161 Msa0216970:CDS
CAAGCTTCTAAAGGCACCCT+TGG 0.478820 2_1:+63178668 None:intergenic
CTAGCTCACATGGAGGATCC+AGG 0.478997 2_1:-63177052 Msa0216970:intron
CTAAAATGGTGTATTACTAC+TGG 0.480201 2_1:+63176032 None:intergenic
TGCTTGTAGACGCGATTGGT+GGG 0.481175 2_1:+63185676 None:intergenic
AGGTCCACAGTTGGATCAGC+AGG 0.481485 2_1:+63180651 None:intergenic
CCAAGAAAGTGGGCAGGAAG+TGG 0.484253 2_1:-63180993 Msa0216970:CDS
ATGTGCAACACCAGATAATC+CGG 0.485168 2_1:+63177911 None:intergenic
AAGTCTAAAGAAGGCATTTG+AGG 0.485504 2_1:-63180679 Msa0216970:CDS
CGCAAATTTGTTATGGAGGA+GGG 0.487406 2_1:-63177887 Msa0216970:CDS
CATTAATCCTCCCAAGGACA+TGG 0.488021 2_1:-63176230 Msa0216970:CDS
TTTAGTTGCTGCTAGCCATC+CGG 0.489423 2_1:-63179628 Msa0216970:CDS
AGAAGCCGGTTCCGGAAGAC+AGG 0.492278 2_1:-63185378 Msa0216970:CDS
CTGATGGAGTGATCCTTTGT+GGG 0.494763 2_1:-63184060 Msa0216970:CDS
TTGACCAATCCTGTGTATCC+AGG 0.496798 2_1:+63180956 None:intergenic
ATTTGTTATGGAGGAGGGAT+GGG 0.498587 2_1:-63177882 Msa0216970:CDS
GGTTGGAACTTTGAAAAGAC+TGG 0.503883 2_1:-63185433 Msa0216970:CDS
TGGGAGCATTTCCACCCAGT+TGG 0.505198 2_1:+63184118 None:intergenic
TCAAGATGACGTTGCTCGAA+AGG 0.505759 2_1:-63176857 Msa0216970:CDS
CTTGCAAGGCAAGCTTCTAA+AGG 0.506121 2_1:+63178659 None:intergenic
ATGGGAATTGTTAGCCACAT+TGG 0.506553 2_1:-63176340 Msa0216970:CDS
TATGAAAGTGAAACATAGTC+AGG 0.507916 2_1:+63184436 None:intergenic
TCTATAACCTGCAGGTCGGC+TGG 0.508364 2_1:-63177947 Msa0216970:intron
GCGCAAATTTGTTATGGAGG+AGG 0.509069 2_1:-63177888 Msa0216970:CDS
TTGGGAAGGATTATGTGGGT+TGG 0.509534 2_1:-63185450 Msa0216970:CDS
AGATCGTATCTTGTGTTCAT+CGG 0.510145 2_1:-63179019 Msa0216970:CDS
TATAGCGTTATGATGTGGTT+TGG 0.512354 2_1:-63175939 Msa0216970:three_prime_UTR
CGATGCATCCGTTTCCAACA+TGG 0.513394 2_1:-63176662 Msa0216970:CDS
GCTCCCATTTCGAGAGGGCG+TGG 0.514907 2_1:-63176931 Msa0216970:CDS
GGGGAAGAGCTTCTACCAGA+TGG 0.515204 2_1:-63177697 Msa0216970:CDS
CGGGAGCTGAGAAGCTTGCA+AGG 0.515232 2_1:+63178645 None:intergenic
TTCAAATACTAGGAGCAAGA+AGG 0.522847 2_1:-63179675 Msa0216970:intron
TGCTAGATGCGGGTGCTGAA+CGG 0.523169 2_1:-63184234 Msa0216970:CDS
CATGTTGGAAACGGATGCAT+CGG 0.524637 2_1:+63176663 None:intergenic
GCTATAAATACATCAAATGC+TGG 0.525024 2_1:-63177100 Msa0216970:CDS
GATACGAAACACTAATTGAT+CGG 0.526071 2_1:-63185829 Msa0216970:five_prime_UTR
TATAAACCAAAGTCTAAAGA+AGG 0.526780 2_1:-63180688 Msa0216970:CDS
TCCAACACATTATCATCCTC+CGG 0.529571 2_1:+63181990 None:intergenic
TACACAGGATTGGTCAATCT+AGG 0.531009 2_1:-63180950 Msa0216970:CDS
TTCTGTGGAATTACCGGAGA+AGG 0.533894 2_1:-63184410 Msa0216970:intron
TTCTTGCTTGTAGACGCGAT+TGG 0.533981 2_1:+63185672 None:intergenic
AATTTGTTATGGAGGAGGGA+TGG 0.534308 2_1:-63177883 Msa0216970:CDS
GATTGTCTGTCTTGTCACAT+TGG 0.534886 2_1:+63184098 None:intergenic
GTTGTGTAGGTCTGGTGATG+AGG 0.535555 2_1:-63178699 Msa0216970:intron
AGTAGCATCCATGTTGGAAA+CGG 0.535832 2_1:+63176654 None:intergenic
TGGGCAACAAATACCTTCTC+CGG 0.537224 2_1:+63184397 None:intergenic
ACAATGTCTTCATTGGCTAA+AGG 0.540872 2_1:+63177172 None:intergenic
ACTGCTGATCTGGAGGCAGC+AGG 0.541599 2_1:-63183944 Msa0216970:intron
GCTAGATGTTGTGCTAAAAG+TGG 0.543937 2_1:+63181966 None:intergenic
TTCACTTTCATATCCTTCTG+TGG 0.545000 2_1:-63184425 Msa0216970:CDS
GGGAAGAGCTTCTACCAGAT+GGG 0.548105 2_1:-63177696 Msa0216970:CDS
AAACGAAGTCACCAGTTGGT+TGG 0.549747 2_1:-63175891 Msa0216970:three_prime_UTR
CTAGCACATACCTCAACTTG+TGG 0.550069 2_1:+63180276 None:intergenic
GTGATGAGGTTGTACGTCCA+AGG 0.550600 2_1:-63178685 Msa0216970:CDS
TCAAATACTAGGAGCAAGAA+GGG 0.551715 2_1:-63179674 Msa0216970:intron
TAATGCTGGGAAAACTGAAC+TGG 0.553010 2_1:-63179073 Msa0216970:CDS
AAGTGGAGCGTGCTAATGCT+GGG 0.554489 2_1:-63179086 Msa0216970:intron
TACCCACTCGCTGTAAAGCT+CGG 0.555270 2_1:-63183974 Msa0216970:CDS
TGGACCTGGATACACAGGAT+TGG 0.555748 2_1:-63180960 Msa0216970:CDS
ATCAAATGCTGGAGTAGAAG+AGG 0.558286 2_1:-63177089 Msa0216970:CDS
TAACAAGCGACCAAGACAAA+GGG 0.558612 2_1:+63176096 None:intergenic
ATCAGTCACATGCGTAGCAA+AGG 0.558895 2_1:-63177730 Msa0216970:CDS
AATAGGGTAGGTTTCTTCAA+AGG 0.559609 2_1:+63185355 None:intergenic
GTTGCACACATCTTGAAAGA+TGG 0.559694 2_1:-63176292 Msa0216970:CDS
ATGTTGGAAACGGATGCATC+GGG 0.562262 2_1:+63176664 None:intergenic
ATATTCCGTTCCACAAGTTG+AGG 0.563078 2_1:-63180286 Msa0216970:intron
GGAATAGAATCCAAGAAAGT+GGG 0.563834 2_1:-63181003 Msa0216970:CDS
AACTATTACTGCTGATCTGG+AGG 0.565893 2_1:-63183951 Msa0216970:CDS
GGAGCATTTCCACCCAGTTG+GGG 0.566321 2_1:+63184120 None:intergenic
TCCGGAGGATGATAATGTGT+TGG 0.568706 2_1:-63181991 Msa0216970:CDS
GATGCTATATTGCTAGATGC+GGG 0.569791 2_1:-63184244 Msa0216970:CDS
AATGATGCTGATTTATCCGA+TGG 0.571407 2_1:-63176607 Msa0216970:CDS
TATGATATAGCGTTATGATG+TGG 0.571578 2_1:-63175944 Msa0216970:three_prime_UTR
TCTGGTAGAAGCTCTTCCCC+AGG 0.573187 2_1:+63177700 None:intergenic
CATCTTGAAAGATGGTAGAT+GGG 0.575725 2_1:-63176284 Msa0216970:CDS
AGTGTTTCGTATCTTTGGAG+TGG 0.577895 2_1:+63185839 None:intergenic
TTTCTTACAACTGCATGTTG+AGG 0.582850 2_1:+63180631 None:intergenic
GACTTGGTTACTAGCTCACA+TGG 0.583662 2_1:-63177062 Msa0216970:CDS
AAAGCTCACCGCAGATTTAG+GGG 0.584213 2_1:+63180156 None:intergenic
TGTGAAGAAGACGAAGAAGC+CGG 0.585540 2_1:-63185392 Msa0216970:CDS
ATTTCTGAATCATCCTCGAC+GGG 0.585699 2_1:+63177196 None:intergenic
GCTGATTTATCCGATGGAGG+AGG 0.586042 2_1:-63176601 Msa0216970:CDS
CAACTCACTTCCTCCTCCAT+CGG 0.586340 2_1:+63176591 None:intergenic
GAAAGCAAAGAAACTTTCTG+AGG 0.587608 2_1:-63178807 Msa0216970:CDS
TAGAATCCAAGAAAGTGGGC+AGG 0.591771 2_1:-63180999 Msa0216970:CDS
GTAGCAAAGGTCATCAACCT+GGG 0.592394 2_1:-63177717 Msa0216970:CDS
TGATGCTATATTGCTAGATG+CGG 0.593007 2_1:-63184245 Msa0216970:CDS
ACATTGAGAAAGCAACAGAC+TGG 0.594075 2_1:-63176699 Msa0216970:CDS
AGATGCGGGTGCTGAACGGA+AGG 0.595022 2_1:-63184230 Msa0216970:CDS
AAATGTTGAGACAGCCAATG+AGG 0.596000 2_1:+63176066 None:intergenic
CATGCGCAAATTTGTTATGG+AGG 0.598160 2_1:-63177891 Msa0216970:CDS
ATGCATCTGTAGGTATTGAT+GGG 0.598292 2_1:-63184513 Msa0216970:intron
TGCATGTTGAGGTCCACAGT+TGG 0.598934 2_1:+63180642 None:intergenic
ATTTGATCGGAGCAAATCCA+TGG 0.599005 2_1:+63185723 None:intergenic
TTCTCCGGTAATTCCACAGA+AGG 0.599224 2_1:+63184412 None:intergenic
GTAGCATATCAACTTTCGAC+TGG 0.599715 2_1:+63176893 None:intergenic
GCATTTGGGAAGGATTATGT+GGG 0.605030 2_1:-63185454 Msa0216970:CDS
AATGTTGAGACAGCCAATGA+GGG 0.607874 2_1:+63176067 None:intergenic
GTTCCGAGCTTTACAGCGAG+TGG 0.609506 2_1:+63183971 None:intergenic
ACCAAACTTGAAACTCCTTG+CGG 0.609907 2_1:+63179047 None:intergenic
TTCCGAGCTTTACAGCGAGT+GGG 0.610350 2_1:+63183972 None:intergenic
GGCTTCCATTAATCCTCCCA+AGG 0.611522 2_1:-63176236 Msa0216970:CDS
TAATCAGACTGAAATGACTA+CGG 0.613034 2_1:-63181062 Msa0216970:intron
TATTTCTGAATCATCCTCGA+CGG 0.613856 2_1:+63177195 None:intergenic
GAGTAGAAGAGGCAATGACT+TGG 0.614884 2_1:-63177078 Msa0216970:CDS
GGAAGGAGCAAGTTGCAGCA+TGG 0.618325 2_1:-63184213 Msa0216970:CDS
TTAACAAGCGACCAAGACAA+AGG 0.619107 2_1:+63176095 None:intergenic
AAAGCAAAGAAACTTTCTGA+GGG 0.623063 2_1:-63178806 Msa0216970:CDS
ACATACCTCAACTTGTGGAA+CGG 0.629268 2_1:+63180281 None:intergenic
ATTAATCCTCCCAAGGACAT+GGG 0.630490 2_1:-63176229 Msa0216970:CDS
TGCAAGCTTCTCAGCTCCCG+AGG 0.630850 2_1:-63178642 Msa0216970:CDS
CAACTGCTTCAACACCACCA+TGG 0.632006 2_1:-63185740 Msa0216970:exon
AAACTGAACTGGATCCCGCA+AGG 0.633426 2_1:-63179062 Msa0216970:CDS
AATTTACAGCAAATTGACAA+TGG 0.637927 2_1:-63184154 Msa0216970:intron
GAACTCGAGAGAGATTTGAT+CGG 0.641844 2_1:+63185710 None:intergenic
TCGAAAGGCACTGATAGCAT+CGG 0.644009 2_1:-63176842 Msa0216970:intron
GGAAGAGCTTCTACCAGATG+GGG 0.644506 2_1:-63177695 Msa0216970:CDS
GAGCATTTCCACCCAGTTGG+GGG 0.645122 2_1:+63184121 None:intergenic
TTGCATGAAGCAACTAACAA+AGG 0.649182 2_1:-63178943 Msa0216970:intron
TATAAAACGAAGTCACCAGT+TGG 0.653247 2_1:-63175895 Msa0216970:three_prime_UTR
ATTGATGCTCCCATTTCGAG+AGG 0.654004 2_1:-63176937 Msa0216970:CDS
TGCATCTGTAGGTATTGATG+GGG 0.655166 2_1:-63184512 Msa0216970:intron
AGATAGCCCATGTCCTTGGG+AGG 0.656852 2_1:+63176223 None:intergenic
GATGCTGATTTATCCGATGG+AGG 0.658748 2_1:-63176604 Msa0216970:CDS
GGCTCCTGCTGATCCAACTG+TGG 0.659783 2_1:-63180655 Msa0216970:CDS
TGAAAATACAGCTTGCATAG+TGG 0.660206 2_1:+63180817 None:intergenic
AAACCTATAGCCAATAGGGT+AGG 0.661932 2_1:+63185343 None:intergenic
TCTAAAGAAGGCATTTGAGG+AGG 0.662919 2_1:-63180676 Msa0216970:CDS
TGCAAGCACCCCTAAATCTG+CGG 0.664901 2_1:-63180164 Msa0216970:intron
TTGATGCTCCCATTTCGAGA+GGG 0.665706 2_1:-63176936 Msa0216970:CDS
ATAGTGACCGCAGTGTGTTG+AGG 0.668427 2_1:+63176315 None:intergenic
TGATGAGGTTGTACGTCCAA+GGG 0.669779 2_1:-63178684 Msa0216970:CDS
TGATGCAGTAGCATCCATGT+TGG 0.673342 2_1:+63176648 None:intergenic
TCTAGGACGAAACTTGCACA+TGG 0.681126 2_1:-63180324 Msa0216970:intron
GAAGAGCTTCTACCAGATGG+GGG 0.686244 2_1:-63177694 Msa0216970:intron
GCATAGTAGAAAATTCCGGA+TGG 0.692803 2_1:+63179613 None:intergenic
TAGCAAAGGTCATCAACCTG+GGG 0.714337 2_1:-63177716 Msa0216970:CDS
GTGTTGCACAGTACCCGTCG+AGG 0.715656 2_1:-63177209 Msa0216970:intron
GCATCTGTAGGTATTGATGG+GGG 0.718341 2_1:-63184511 Msa0216970:intron
ATGGAGTGATCCTTTGTGGG+AGG 0.719607 2_1:-63184057 Msa0216970:CDS
TGATCGGAGCAAATCCATGG+TGG 0.722570 2_1:+63185726 None:intergenic
ATTGGAACCTCAACACACTG+CGG 0.742727 2_1:-63176322 Msa0216970:CDS
AGTGTGTTGAGGTTCCAATG+TGG 0.787141 2_1:+63176326 None:intergenic
TTGGTTACTAGCTCACATGG+AGG 0.794926 2_1:-63177059 Msa0216970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATGAAGAAAAAAAA+AGG + chr2_1:63176130-63176149 None:intergenic 10.0%
!! TGCAAAATAAATAAATAAAT+TGG + chr2_1:63179675-63179694 None:intergenic 10.0%
!!! TATGCATTTTTTTTTTATTA+AGG - chr2_1:63180531-63180550 Msa0216970:intron 10.0%
!!! TAAATTTAAGTTACATTTTT+TGG - chr2_1:63181686-63181705 Msa0216970:intron 10.0%
!!! ATTTTTTTTTAGATTCAATT+TGG - chr2_1:63184078-63184097 Msa0216970:CDS 10.0%
!!! TTTTTTTTTAGATTCAATTT+GGG - chr2_1:63184079-63184098 Msa0216970:CDS 10.0%
!!! ATATTTTATTTGAACTTATA+GGG - chr2_1:63185269-63185288 Msa0216970:intron 10.0%
!!! TTCATTTTATCTTTTGTTAA+TGG + chr2_1:63176906-63176925 None:intergenic 15.0%
!! ATTAACAAAAGATAAAATGA+AGG - chr2_1:63176905-63176924 Msa0216970:CDS 15.0%
!!! TTTAAAGCTTTATTTTATGA+TGG - chr2_1:63178049-63178068 Msa0216970:intron 15.0%
!!! AAATTAATTTGATTTTATGC+CGG - chr2_1:63178391-63178410 Msa0216970:intron 15.0%
!! ATTCTAATAATTGAAGATAA+AGG - chr2_1:63179099-63179118 Msa0216970:intron 15.0%
!! TTCTAATAATTGAAGATAAA+GGG - chr2_1:63179100-63179119 Msa0216970:intron 15.0%
!!! TTAAATTGATATTTTGTAGA+TGG - chr2_1:63179845-63179864 Msa0216970:intron 15.0%
!!! TTTATTAAGGAAGTTTTAAA+TGG - chr2_1:63180544-63180563 Msa0216970:intron 15.0%
!! ATATAACTACTTTATAGATA+TGG + chr2_1:63181236-63181255 None:intergenic 15.0%
!! AGAAATGTTTATTAATAATG+AGG - chr2_1:63181285-63181304 Msa0216970:intron 15.0%
!!! TAGAATTTTTTTTGACAAAA+TGG - chr2_1:63181334-63181353 Msa0216970:intron 15.0%
!!! TGTTATACTTATGTTTTTTT+TGG - chr2_1:63181811-63181830 Msa0216970:intron 15.0%
!!! GTTATACTTATGTTTTTTTT+GGG - chr2_1:63181812-63181831 Msa0216970:intron 15.0%
!!! TTATACTTATGTTTTTTTTG+GGG - chr2_1:63181813-63181832 Msa0216970:intron 15.0%
!!! TTTAGGAAATGAATTTTTTT+AGG - chr2_1:63181855-63181874 Msa0216970:intron 15.0%
!! AAAGAAAAGTAAATATTAGA+AGG + chr2_1:63182406-63182425 None:intergenic 15.0%
!! NNNNNNNNNNTGCAATCAAA+CGG + chr2_1:63182498-63182517 None:intergenic 15.0%
!! NNNNNNNNNNACTTGATGTT+AGG - chr2_1:63182598-63182617 Msa0216970:intron 15.0%
!!! TATAATTTAACACAATTTTC+AGG + chr2_1:63183187-63183206 None:intergenic 15.0%
!! AACAAAAGTTCTTAATAATA+AGG + chr2_1:63183951-63183970 None:intergenic 15.0%
!!! TAATAACATTTTTCATATGT+CGG - chr2_1:63184131-63184150 Msa0216970:CDS 15.0%
!!! GATATTTTATTTGAACTTAT+AGG - chr2_1:63185268-63185287 Msa0216970:intron 15.0%
!! ATATGAAGAAAAAAAAAGGA+AGG + chr2_1:63176126-63176145 None:intergenic 20.0%
!! ATATAAGCCAATCAAAATTA+TGG - chr2_1:63177077-63177096 Msa0216970:CDS 20.0%
!! TATAAGCCAATCAAAATTAT+GGG - chr2_1:63177078-63177097 Msa0216970:CDS 20.0%
!! AATTTATTTCGGTTATTTGT+TGG - chr2_1:63177446-63177465 Msa0216970:intron 20.0%
!!! TATTTGTTGGAAAAAAATTC+AGG - chr2_1:63177459-63177478 Msa0216970:intron 20.0%
!!! TTTCAAGCTTTATTTTATCA+TGG - chr2_1:63177945-63177964 Msa0216970:intron 20.0%
!!! AAATTAATTTTTTGAAGTGC+GGG + chr2_1:63178381-63178400 None:intergenic 20.0%
!!! CAAATTAATTTTTTGAAGTG+CGG + chr2_1:63178382-63178401 None:intergenic 20.0%
!! ATTTACAAATGACATATGAT+GGG - chr2_1:63178469-63178488 Msa0216970:intron 20.0%
!! TACATAGATAAATATCAATC+AGG - chr2_1:63178941-63178960 Msa0216970:intron 20.0%
!! TAAGGTTTGTATTTAAATGA+TGG - chr2_1:63179155-63179174 Msa0216970:intron 20.0%
!!! TCATTTGAATTTTTAGTGAA+TGG - chr2_1:63179404-63179423 Msa0216970:intron 20.0%
!! ATATTCCTAATAATCTTGTT+TGG - chr2_1:63180256-63180275 Msa0216970:intron 20.0%
!! GTGGTAATATTAAAAATATG+AGG + chr2_1:63180420-63180439 None:intergenic 20.0%
!! AAAGAAAGAAAGAAAAAATG+AGG + chr2_1:63180886-63180905 None:intergenic 20.0%
!! TTCTAGATAAAAACTTGAAA+AGG - chr2_1:63181366-63181385 Msa0216970:intron 20.0%
!! TCTAGATAAAAACTTGAAAA+GGG - chr2_1:63181367-63181386 Msa0216970:intron 20.0%
!!! AATTGTTCCTATTTTATTCT+AGG - chr2_1:63181399-63181418 Msa0216970:intron 20.0%
!!! TATACTTATGTTTTTTTTGG+GGG - chr2_1:63181814-63181833 Msa0216970:intron 20.0%
!! AAAAAATTCATTTCCTAAAC+TGG + chr2_1:63181854-63181873 None:intergenic 20.0%
!! AATTGAATTCACAAAAACTA+TGG + chr2_1:63182247-63182266 None:intergenic 20.0%
!!! ATAGTTTTTGTGAATTCAAT+TGG - chr2_1:63182246-63182265 Msa0216970:intron 20.0%
!!! ATTTACTTTTCTTTTCTAGT+AGG - chr2_1:63182412-63182431 Msa0216970:intron 20.0%
!!! ATTGTATTTATTTGTTGTGT+AGG - chr2_1:63183028-63183047 Msa0216970:intron 20.0%
!! TTTCAATAAAATTGTCATCT+TGG - chr2_1:63183529-63183548 Msa0216970:intron 20.0%
!!! TTGTTTTCAATGTTTTGTAT+TGG - chr2_1:63183624-63183643 Msa0216970:intron 20.0%
!!! TGTTTTCAATGTTTTGTATT+GGG - chr2_1:63183625-63183644 Msa0216970:intron 20.0%
!!! TGGTAATTTAACTTAATAGA+AGG + chr2_1:63183758-63183777 None:intergenic 20.0%
!!! AACAATTCAATATTTTTAGC+TGG - chr2_1:63184470-63184489 Msa0216970:CDS 20.0%
!!! GAAGTTTTAATTTTTTGTGT+TGG - chr2_1:63184496-63184515 Msa0216970:CDS 20.0%
!! CAAATATACATCATTATTTC+CGG + chr2_1:63184773-63184792 None:intergenic 20.0%
!!! CTTTAAGTTGACTATTTTAA+TGG - chr2_1:63184995-63185014 Msa0216970:intron 20.0%
!! ATTGCAATTTCGTTATTAAT+AGG - chr2_1:63185767-63185786 Msa0216970:five_prime_UTR 20.0%
!! AAAAAAGGAAGGATTTTTAC+AGG + chr2_1:63176115-63176134 None:intergenic 25.0%
!!! GTTGTGATTTTGAAAGATTA+TGG - chr2_1:63176199-63176218 Msa0216970:exon 25.0%
!!! ATTTTGAAAGATTATGGTTG+CGG - chr2_1:63176205-63176224 Msa0216970:CDS 25.0%
!! ATGTTCAATTTTCTTGCATT+TGG - chr2_1:63176271-63176290 Msa0216970:CDS 25.0%
!! TGTTCAATTTTCTTGCATTT+GGG - chr2_1:63176272-63176291 Msa0216970:CDS 25.0%
! AATAAGCGTTTGTAGTATAA+AGG - chr2_1:63176530-63176549 Msa0216970:intron 25.0%
! TTTGGTTATTTATCGAAACA+GGG + chr2_1:63176680-63176699 None:intergenic 25.0%
! ATTTGGTTATTTATCGAAAC+AGG + chr2_1:63176681-63176700 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr2_1:63176756-63176775 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr2_1:63176757-63176776 None:intergenic 25.0%
! TTAAGTGCTTATAGCATAAA+TGG - chr2_1:63176850-63176869 Msa0216970:CDS 25.0%
! CTGTTTACATATATGCTATA+AGG - chr2_1:63176932-63176951 Msa0216970:CDS 25.0%
!! TTGTTATTGTTGCATGTAAT+TGG - chr2_1:63177108-63177127 Msa0216970:CDS 25.0%
!! AACAACTGATGATTCTTTTA+TGG - chr2_1:63177184-63177203 Msa0216970:CDS 25.0%
! AAGAAAAAACCAAAAACAGT+GGG + chr2_1:63177365-63177384 None:intergenic 25.0%
! AAAGAAAAAACCAAAAACAG+TGG + chr2_1:63177366-63177385 None:intergenic 25.0%
! GAAATAAATTAAAATCTCCC+CGG + chr2_1:63177436-63177455 None:intergenic 25.0%
!!! GGGGAGATTTTAATTTATTT+CGG - chr2_1:63177435-63177454 Msa0216970:intron 25.0%
! AATTTACAGCAAATTGACAA+TGG - chr2_1:63177586-63177605 Msa0216970:intron 25.0%
! ATTTAATGTACCATCATGAA+AGG - chr2_1:63177872-63177891 Msa0216970:CDS 25.0%
! ATAATAGTAACCTTTCATGA+TGG + chr2_1:63177885-63177904 None:intergenic 25.0%
! AAAAGCTGTGTTATAAAACA+AGG - chr2_1:63178150-63178169 Msa0216970:intron 25.0%
! GATTTACAAATGACATATGA+TGG - chr2_1:63178468-63178487 Msa0216970:intron 25.0%
! TTTACAAATGACATATGATG+GGG - chr2_1:63178470-63178489 Msa0216970:intron 25.0%
!!! TATTTTTGAGCAATCAAAGA+TGG - chr2_1:63178545-63178564 Msa0216970:intron 25.0%
!!! ATTTTTGAGCAATCAAAGAT+GGG - chr2_1:63178546-63178565 Msa0216970:intron 25.0%
!! GTAGATGATATAGTCTTAAT+TGG - chr2_1:63178665-63178684 Msa0216970:CDS 25.0%
!!! TTAGAGTTGTCTCTTTTTTT+GGG - chr2_1:63178724-63178743 Msa0216970:intron 25.0%
!! TTCTGATTTACTCTTTTTAC+CGG + chr2_1:63179072-63179091 None:intergenic 25.0%
! AAAAAGAGTAAATCAGAAGA+AGG - chr2_1:63179074-63179093 Msa0216970:CDS 25.0%
! TATGTGCTAAACAGTTAATA+AGG - chr2_1:63179137-63179156 Msa0216970:intron 25.0%
!! GTTTAGTTTCAAAATTAGCA+AGG - chr2_1:63179327-63179346 Msa0216970:intron 25.0%
!! TTTAGACAATGATAGTGTTA+TGG - chr2_1:63179375-63179394 Msa0216970:intron 25.0%
! TATTAGAAGTAGAACAGAAT+GGG + chr2_1:63179497-63179516 None:intergenic 25.0%
! ATATTAGAAGTAGAACAGAA+TGG + chr2_1:63179498-63179517 None:intergenic 25.0%
! TAATTATGGACAACATATTG+TGG - chr2_1:63179705-63179724 Msa0216970:intron 25.0%
! TTGATTATACTTTCCGTATT+TGG - chr2_1:63179879-63179898 Msa0216970:intron 25.0%
! TAGCTAAAATGGTATGTAAT+AGG - chr2_1:63180057-63180076 Msa0216970:intron 25.0%
! TTTGACCAAACAAGATTATT+AGG + chr2_1:63180264-63180283 None:intergenic 25.0%
! AAATACACCTAGTAATCTTT+GGG - chr2_1:63180281-63180300 Msa0216970:intron 25.0%
! TGCATATTATAGAGTAATAC+AGG + chr2_1:63180517-63180536 None:intergenic 25.0%
!! GATGTTTAAGCAATAACTTT+TGG - chr2_1:63180566-63180585 Msa0216970:intron 25.0%
!! ACCAAAATACCAATTTTGAA+TGG - chr2_1:63180716-63180735 Msa0216970:intron 25.0%
!! TCCATTCAAAATTGGTATTT+TGG + chr2_1:63180720-63180739 None:intergenic 25.0%
! GATTCTATTCCATTCAAAAT+TGG + chr2_1:63180728-63180747 None:intergenic 25.0%
!! TCTTTCTTTCAGTTGTTATT+TGG - chr2_1:63180897-63180916 Msa0216970:intron 25.0%
! ACAGTTCAGATAAAAATTAG+AGG + chr2_1:63180980-63180999 None:intergenic 25.0%
! CAAATAAGTAACTTCAAACA+GGG + chr2_1:63181009-63181028 None:intergenic 25.0%
! ACAAATAAGTAACTTCAAAC+AGG + chr2_1:63181010-63181029 None:intergenic 25.0%
!!! ATTTGTTATGATTGCTTCTT+AGG - chr2_1:63181024-63181043 Msa0216970:CDS 25.0%
! TATAAACCAAAGTCTAAAGA+AGG - chr2_1:63181052-63181071 Msa0216970:CDS 25.0%
! CTAGATAAAAACTTGAAAAG+GGG - chr2_1:63181368-63181387 Msa0216970:intron 25.0%
!!! ATACTTATGTTTTTTTTGGG+GGG - chr2_1:63181815-63181834 Msa0216970:intron 25.0%
! TGAAACATAGATATATGAGA+AGG + chr2_1:63181991-63182010 None:intergenic 25.0%
! GCACAAATTAAAACAAGAAA+CGG + chr2_1:63182019-63182038 None:intergenic 25.0%
! ATTTCCTCAACATGAATTAA+AGG - chr2_1:63182177-63182196 Msa0216970:intron 25.0%
! TTGAGAAATTTCAGAAGAAT+TGG - chr2_1:63182894-63182913 Msa0216970:intron 25.0%
! AAGTGTAAGTTCAAATATCT+AGG - chr2_1:63182962-63182981 Msa0216970:intron 25.0%
! TAAATACAATAAGCAAAGCT+TGG + chr2_1:63183018-63183037 None:intergenic 25.0%
!! ATTGGAAATAGGTCAATTTT+TGG - chr2_1:63183433-63183452 Msa0216970:intron 25.0%
!! TAATAGAAGGTTTTCAGTAA+AGG + chr2_1:63183745-63183764 None:intergenic 25.0%
!!! ATAGAGTTTTAGCATCAAAA+TGG + chr2_1:63183778-63183797 None:intergenic 25.0%
!!! TAACAAGTACCAAGTTTTTT+GGG + chr2_1:63183886-63183905 None:intergenic 25.0%
!!! ATAACAAGTACCAAGTTTTT+TGG + chr2_1:63183887-63183906 None:intergenic 25.0%
! TTACATACATATGTCTGTTA+AGG + chr2_1:63184114-63184133 None:intergenic 25.0%
!!! ATCAAGAGACCAATTTTTTA+AGG - chr2_1:63184194-63184213 Msa0216970:intron 25.0%
! AAAATACCCTTTACATCAAA+AGG + chr2_1:63184370-63184389 None:intergenic 25.0%
! TCTTATTATCCTATGTTATG+TGG - chr2_1:63184428-63184447 Msa0216970:CDS 25.0%
! CTTATTATCCTATGTTATGT+GGG - chr2_1:63184429-63184448 Msa0216970:CDS 25.0%
! ATTGAATTGTTAAGCTGAAA+AGG + chr2_1:63184461-63184480 None:intergenic 25.0%
!! CAAAATAGTTCTGTATATCT+AGG - chr2_1:63184735-63184754 Msa0216970:intron 25.0%
! AGTCAACTTAAAGACATTTA+TGG + chr2_1:63184988-63185007 None:intergenic 25.0%
! AACTTTATTACTTCGACAAA+TGG - chr2_1:63185334-63185353 Msa0216970:intron 25.0%
! AACATTTCAACTTTGTAAAG+AGG - chr2_1:63185599-63185618 Msa0216970:intron 25.0%
CAATTAGTGTTTCGTATCTT+TGG + chr2_1:63175909-63175928 None:intergenic 30.0%
GATACGAAACACTAATTGAT+CGG - chr2_1:63175911-63175930 Msa0216970:three_prime_UTR 30.0%
AAACACTAATTGATCGGTTA+GGG - chr2_1:63175917-63175936 Msa0216970:three_prime_UTR 30.0%
!! TTTTGAAAGATTATGGTTGC+GGG - chr2_1:63176206-63176225 Msa0216970:CDS 30.0%
!! TTGATTTTTCAGATGTCAGA+AGG - chr2_1:63176232-63176251 Msa0216970:CDS 30.0%
TTCTTCACATGCAAATAAAC+CGG + chr2_1:63176337-63176356 None:intergenic 30.0%
!! TCAGTTGTTGTTTCATTACT+AGG - chr2_1:63176486-63176505 Msa0216970:intron 30.0%
! TTAAGTTGTTGTTACAGACA+GGG + chr2_1:63176602-63176621 None:intergenic 30.0%
! ATTAAGTTGTTGTTACAGAC+AGG + chr2_1:63176603-63176622 None:intergenic 30.0%
! CTTATTTCTCTAAGCTCTAT+AGG + chr2_1:63176974-63176993 None:intergenic 30.0%
TAGAGCTTAGAGAAATAAGT+TGG - chr2_1:63176975-63176994 Msa0216970:intron 30.0%
!! GACAAACCCATAATTTTGAT+TGG + chr2_1:63177087-63177106 None:intergenic 30.0%
!! TTGTTGCATGTAATTGGTTT+TGG - chr2_1:63177114-63177133 Msa0216970:CDS 30.0%
!!! GTAATTGGTTTTGGTCAATT+TGG - chr2_1:63177123-63177142 Msa0216970:CDS 30.0%
TATGAAAGTGAAACATAGTC+AGG + chr2_1:63177307-63177326 None:intergenic 30.0%
GTTGGAAAAAAATTCAGGTA+AGG - chr2_1:63177464-63177483 Msa0216970:intron 30.0%
GAAAAAAATTCAGGTAAGGT+TGG - chr2_1:63177468-63177487 Msa0216970:intron 30.0%
CTTTGGTTAAATTTGACTGA+TGG - chr2_1:63177664-63177683 Msa0216970:intron 30.0%
GTTGAACATTACAAAAAGAC+AGG - chr2_1:63177742-63177761 Msa0216970:CDS 30.0%
TTCATCAGTAAGAATGTGTT+TGG + chr2_1:63178016-63178035 None:intergenic 30.0%
ACAAAATTGCACAAAACCAT+AGG - chr2_1:63178285-63178304 Msa0216970:intron 30.0%
CAAAATTGCACAAAACCATA+GGG - chr2_1:63178286-63178305 Msa0216970:intron 30.0%
AAAATTGCACAAAACCATAG+GGG - chr2_1:63178287-63178306 Msa0216970:intron 30.0%
TCTTCAATAGCTTCACAATA+TGG + chr2_1:63178328-63178347 None:intergenic 30.0%
ATATTGTGAAGCTATTGAAG+AGG - chr2_1:63178327-63178346 Msa0216970:intron 30.0%
AGATAACAAAGGAATCTAAC+AGG - chr2_1:63178428-63178447 Msa0216970:intron 30.0%
GCTATCCAAAATAATTCTCA+GGG + chr2_1:63178498-63178517 None:intergenic 30.0%
AGCTATCCAAAATAATTCTC+AGG + chr2_1:63178499-63178518 None:intergenic 30.0%
!! TATTTTGGATAGCTTTTGAG+AGG - chr2_1:63178505-63178524 Msa0216970:intron 30.0%
ATCAGACAGATAAAAGACAA+GGG + chr2_1:63178605-63178624 None:intergenic 30.0%
GAGCCAAAAGAAGAAATAAA+TGG - chr2_1:63178689-63178708 Msa0216970:CDS 30.0%
!! TGGCCATTTATTTCTTCTTT+TGG + chr2_1:63178695-63178714 None:intergenic 30.0%
!!! CTTAGAGTTGTCTCTTTTTT+TGG - chr2_1:63178723-63178742 Msa0216970:intron 30.0%
GTTGTTAAATGAGAAAACAG+AGG - chr2_1:63178757-63178776 Msa0216970:intron 30.0%
TCAGCAATCTATACCATAAT+AGG + chr2_1:63179000-63179019 None:intergenic 30.0%
GATTAGACATGATGTATGAT+AGG - chr2_1:63179180-63179199 Msa0216970:intron 30.0%
TAGACAGATTGAAATAGACT+AGG + chr2_1:63179557-63179576 None:intergenic 30.0%
ATCAAAAATAAGCAACTCTG+AGG + chr2_1:63179597-63179616 None:intergenic 30.0%
GAGTTCATATGATATACGAA+GGG + chr2_1:63179634-63179653 None:intergenic 30.0%
AGAGTTCATATGATATACGA+AGG + chr2_1:63179635-63179654 None:intergenic 30.0%
TGATTTCTCATCACTACAAA+AGG - chr2_1:63179809-63179828 Msa0216970:intron 30.0%
! GATATTTTGTAGATGGTAAC+TGG - chr2_1:63179852-63179871 Msa0216970:intron 30.0%
ATATCGCATGAAACCAAATA+CGG + chr2_1:63179895-63179914 None:intergenic 30.0%
TAAATGAAGTGATTCGCAAA+AGG + chr2_1:63180155-63180174 None:intergenic 30.0%
CAAATACACCTAGTAATCTT+TGG - chr2_1:63180280-63180299 Msa0216970:intron 30.0%
AATACACCTAGTAATCTTTG+GGG - chr2_1:63180282-63180301 Msa0216970:intron 30.0%
CATTGGAGTATATTAAACAG+TGG + chr2_1:63180439-63180458 None:intergenic 30.0%
ATGCAAACATTTGCTTAGAA+GGG + chr2_1:63180486-63180505 None:intergenic 30.0%
TATGCAAACATTTGCTTAGA+AGG + chr2_1:63180487-63180506 None:intergenic 30.0%
TAATCAGACTGAAATGACTA+CGG - chr2_1:63180678-63180697 Msa0216970:CDS 30.0%
GTTTCGTCCTAGAATAAAAT+AGG + chr2_1:63181409-63181428 None:intergenic 30.0%
AAACTTTCAAGAGATAAGTG+AGG + chr2_1:63181493-63181512 None:intergenic 30.0%
GAGAAAACTTCTCTTAGATT+AGG - chr2_1:63181708-63181727 Msa0216970:intron 30.0%
TATTCAAATCCCTTGATCAT+AGG - chr2_1:63181756-63181775 Msa0216970:intron 30.0%
ATTCAAATCCCTTGATCATA+GGG - chr2_1:63181757-63181776 Msa0216970:intron 30.0%
ATTATATGCTGTACCAGTTT+AGG - chr2_1:63181838-63181857 Msa0216970:intron 30.0%
! TGCATATGTTGCAATTGTTT+TGG - chr2_1:63181900-63181919 Msa0216970:intron 30.0%
TGAGAAATGAGAATAGTTAG+TGG + chr2_1:63181968-63181987 None:intergenic 30.0%
!!! ACTAAAGTTTTGAACATACG+TGG + chr2_1:63182098-63182117 None:intergenic 30.0%
ATGTTGAGGAAATAAACAGT+TGG + chr2_1:63182170-63182189 None:intergenic 30.0%
TTCACCTTTAATTCATGTTG+AGG + chr2_1:63182184-63182203 None:intergenic 30.0%
TATTATCTCTGATCTTCTAC+CGG + chr2_1:63182310-63182329 None:intergenic 30.0%
GAGATAATATCAATTGAAGC+TGG - chr2_1:63182321-63182340 Msa0216970:intron 30.0%
!! ATGTCAGTCATTGATTCATT+TGG - chr2_1:63182348-63182367 Msa0216970:intron 30.0%
GAAAAGTTGCATACAATAGA+AGG - chr2_1:63182744-63182763 Msa0216970:intron 30.0%
TTGACAAACTGAGAAATCTT+AGG - chr2_1:63182840-63182859 Msa0216970:intron 30.0%
TGACAAACTGAGAAATCTTA+GGG - chr2_1:63182841-63182860 Msa0216970:intron 30.0%
AAAGCAAAGAAACTTTCTGA+GGG - chr2_1:63182934-63182953 Msa0216970:intron 30.0%
!! ATTTATTTGTTGTGTAGGTC+TGG - chr2_1:63183033-63183052 Msa0216970:intron 30.0%
TAAAAATCATGTATCTCCTC+GGG + chr2_1:63183117-63183136 None:intergenic 30.0%
GTAAAAATCATGTATCTCCT+CGG + chr2_1:63183118-63183137 None:intergenic 30.0%
TTAAATTATAATGCCGTGCA+CGG - chr2_1:63183197-63183216 Msa0216970:intron 30.0%
TTGGTTTCATGAGAAATGTA+TGG - chr2_1:63183452-63183471 Msa0216970:intron 30.0%
AATTGTCATCTTGGCTTATA+TGG - chr2_1:63183538-63183557 Msa0216970:intron 30.0%
TGACTGATATCAATGATATC+AGG + chr2_1:63183998-63184017 None:intergenic 30.0%
!!! AGAGACCAATTTTTTAAGGA+TGG - chr2_1:63184198-63184217 Msa0216970:CDS 30.0%
AGCAACCATCCTTAAAAAAT+TGG + chr2_1:63184206-63184225 None:intergenic 30.0%
!!! TTTTTTAAGGATGGTTGCTT+AGG - chr2_1:63184207-63184226 Msa0216970:CDS 30.0%
! GATGTCAAAAATCATTTTGC+TGG + chr2_1:63184273-63184292 None:intergenic 30.0%
TGTGTTCACTTCGTATATTA+AGG - chr2_1:63184312-63184331 Msa0216970:intron 30.0%
! TGTTGACCTTTTGATGTAAA+GGG - chr2_1:63184361-63184380 Msa0216970:intron 30.0%
GCTATAAATACATCAAATGC+TGG - chr2_1:63184640-63184659 Msa0216970:intron 30.0%
!! GTTGATATGCTACTTTCATT+TGG - chr2_1:63184857-63184876 Msa0216970:intron 30.0%
ACATTTATGGACAATGTATC+CGG + chr2_1:63184975-63184994 None:intergenic 30.0%
! GACAAGTGTCATCATATTTT+CGG + chr2_1:63185234-63185253 None:intergenic 30.0%
TGAACTTATAGGGTTGTTAA+TGG - chr2_1:63185279-63185298 Msa0216970:intron 30.0%
ATGAAAACTTGTCCATTCTT+CGG + chr2_1:63185311-63185330 None:intergenic 30.0%
!!! GGTTATTTTTAACGACAACA+AGG - chr2_1:63185477-63185496 Msa0216970:CDS 30.0%
! ATTTTTAACGACAACAAGGT+AGG - chr2_1:63185481-63185500 Msa0216970:CDS 30.0%
! TTTTTAACGACAACAAGGTA+GGG - chr2_1:63185482-63185501 Msa0216970:CDS 30.0%
CTAAAATGGTGTATTACTAC+TGG + chr2_1:63185711-63185730 None:intergenic 30.0%
! CAGTAGTAATACACCATTTT+AGG - chr2_1:63185709-63185728 Msa0216970:CDS 30.0%
TATGATATAGCGTTATGATG+TGG - chr2_1:63185796-63185815 Msa0216970:five_prime_UTR 30.0%
GAAACACTAATTGATCGGTT+AGG - chr2_1:63175916-63175935 Msa0216970:three_prime_UTR 35.0%
!! ATTTTTCAGATGTCAGAAGG+TGG - chr2_1:63176235-63176254 Msa0216970:CDS 35.0%
!! TTTTTCAGATGTCAGAAGGT+GGG - chr2_1:63176236-63176255 Msa0216970:CDS 35.0%
! CAATTTTCTTGCATTTGGGA+AGG - chr2_1:63176276-63176295 Msa0216970:CDS 35.0%
! CTTTGAAAAGACTGGAAATC+CGG - chr2_1:63176315-63176334 Msa0216970:CDS 35.0%
AATAGGGTAGGTTTCTTCAA+AGG + chr2_1:63176388-63176407 None:intergenic 35.0%
TTTGAAGAAACCTACCCTAT+TGG - chr2_1:63176387-63176406 Msa0216970:intron 35.0%
ACACAAACCTATAGCCAATA+GGG + chr2_1:63176404-63176423 None:intergenic 35.0%
AACACAAACCTATAGCCAAT+AGG + chr2_1:63176405-63176424 None:intergenic 35.0%
!!! ACACTTATCAGAAGTGCTTT+TGG - chr2_1:63176565-63176584 Msa0216970:intron 35.0%
TACGCTATAAGCGCATAATT+TGG + chr2_1:63176698-63176717 None:intergenic 35.0%
ATACTCACAAGTGCTTATGT+TGG - chr2_1:63177043-63177062 Msa0216970:intron 35.0%
! CAATTTGGTTGTTGAGTTGT+TGG - chr2_1:63177138-63177157 Msa0216970:CDS 35.0%
TATCCATTGTATGCATCTGT+AGG - chr2_1:63177217-63177236 Msa0216970:intron 35.0%
ATACCTACAGATGCATACAA+TGG + chr2_1:63177223-63177242 None:intergenic 35.0%
!! TATGCATCTGTAGGTATTGA+TGG - chr2_1:63177226-63177245 Msa0216970:intron 35.0%
!! ATGCATCTGTAGGTATTGAT+GGG - chr2_1:63177227-63177246 Msa0216970:intron 35.0%
TTCACTTTCATATCCTTCTG+TGG - chr2_1:63177315-63177334 Msa0216970:intron 35.0%
ATATCCTTCTGTGGAATTAC+CGG - chr2_1:63177324-63177343 Msa0216970:intron 35.0%
!! TATTTGTTGCCCACTGTTTT+TGG - chr2_1:63177353-63177372 Msa0216970:intron 35.0%
! TTCATAGAGAAGTCTTATGC+CGG - chr2_1:63177414-63177433 Msa0216970:intron 35.0%
AAAAATTCAGGTAAGGTTGG+CGG - chr2_1:63177471-63177490 Msa0216970:intron 35.0%
TGATGCTATATTGCTAGATG+CGG - chr2_1:63177495-63177514 Msa0216970:intron 35.0%
ATTGTCTGTCTTGTCACATT+GGG + chr2_1:63177644-63177663 None:intergenic 35.0%
TATGCATGCATGATTCTTAG+TGG - chr2_1:63177990-63178009 Msa0216970:intron 35.0%
ATCATGCATGCATAATCGAT+TGG + chr2_1:63178088-63178107 None:intergenic 35.0%
TATGCATGCATGATTCTTAG+TGG - chr2_1:63177990-63178009 Msa0216970:intron 35.0%
TTAGTGGTTGAACACAAACA+TGG - chr2_1:63178110-63178129 Msa0216970:intron 35.0%
GAACACAAACATGGAACTTA+AGG - chr2_1:63178119-63178138 Msa0216970:intron 35.0%
GTGTAAACATGCTGAAAAAG+TGG - chr2_1:63178178-63178197 Msa0216970:intron 35.0%
TGTTGTTATAGATAGGGTCA+AGG + chr2_1:63178255-63178274 None:intergenic 35.0%
TGACCCTATCTATAACAACA+TGG - chr2_1:63178255-63178274 Msa0216970:intron 35.0%
GACCCTATCTATAACAACAT+GGG - chr2_1:63178256-63178275 Msa0216970:intron 35.0%
CACCCATGTTGTTATAGATA+GGG + chr2_1:63178261-63178280 None:intergenic 35.0%
TCACCCATGTTGTTATAGAT+AGG + chr2_1:63178262-63178281 None:intergenic 35.0%
AAATTGCACAAAACCATAGG+GGG - chr2_1:63178288-63178307 Msa0216970:intron 35.0%
!! AATTTGATTTTATGCCGGAG+AGG - chr2_1:63178396-63178415 Msa0216970:intron 35.0%
GGTTGACATGAAGATAACAA+AGG - chr2_1:63178417-63178436 Msa0216970:intron 35.0%
GTCCACAAAAGATGCTTTAA+GGG - chr2_1:63178568-63178587 Msa0216970:intron 35.0%
!! ATGCTTTAAGGGTCAACTTT+GGG - chr2_1:63178579-63178598 Msa0216970:intron 35.0%
CATCAGACAGATAAAAGACA+AGG + chr2_1:63178606-63178625 None:intergenic 35.0%
!! GACAACTCTAAGACTATAAC+TGG + chr2_1:63178715-63178734 None:intergenic 35.0%
ATGGTGTAGTTTAAACACAC+TGG + chr2_1:63178797-63178816 None:intergenic 35.0%
CCTATCTAAAAGAGTCTCTA+TGG + chr2_1:63178816-63178835 None:intergenic 35.0%
! CCATAGAGACTCTTTTAGAT+AGG - chr2_1:63178813-63178832 Msa0216970:CDS 35.0%
! AAAGCATTAGCGAGAAAGTT+GGG - chr2_1:63178969-63178988 Msa0216970:CDS 35.0%
TCCATAAAGTCAGTAATACC+TGG - chr2_1:63179220-63179239 Msa0216970:intron 35.0%
!! ACCAGGTATTACTGACTTTA+TGG + chr2_1:63179224-63179243 None:intergenic 35.0%
ATAAAGTCAGTAATACCTGG+TGG - chr2_1:63179223-63179242 Msa0216970:intron 35.0%
TAAAGTCAGTAATACCTGGT+GGG - chr2_1:63179224-63179243 Msa0216970:intron 35.0%
!! TTGTGCTGTTATGCTCTTTT+TGG - chr2_1:63179433-63179452 Msa0216970:intron 35.0%
!! TTTGGTTCTGTCATTTCTAG+TGG - chr2_1:63179451-63179470 Msa0216970:intron 35.0%
ATATGATATACGAAGGGTGA+AGG + chr2_1:63179628-63179647 None:intergenic 35.0%
TGCATTGTGTGTGCTAATTA+TGG - chr2_1:63179691-63179710 Msa0216970:intron 35.0%
! CTCAGATGTTTTCTCTTATC+CGG - chr2_1:63179731-63179750 Msa0216970:intron 35.0%
!!! GCACAACATCTAGCATTTTT+TGG - chr2_1:63179783-63179802 Msa0216970:intron 35.0%
TCACCAGATTAGAAGGAAAA+AGG + chr2_1:63180024-63180043 None:intergenic 35.0%
! AAAGCATTCACCAGATTAGA+AGG + chr2_1:63180031-63180050 None:intergenic 35.0%
!! AGCTTGTTGCTCTTTGAAAT+TGG - chr2_1:63180213-63180232 Msa0216970:intron 35.0%
!! GCTTGTTGCTCTTTGAAATT+GGG - chr2_1:63180214-63180233 Msa0216970:intron 35.0%
AAATTGGGAATGCACTTGTT+TGG - chr2_1:63180229-63180248 Msa0216970:intron 35.0%
! AGATGATGCTACTTACTGTT+TGG + chr2_1:63180379-63180398 None:intergenic 35.0%
TACTCCAATGTCCAATTACT+TGG - chr2_1:63180449-63180468 Msa0216970:intron 35.0%
GAAAAAACTGGCCAAGTAAT+TGG + chr2_1:63180463-63180482 None:intergenic 35.0%
TGCAAACATTTGCTTAGAAG+GGG + chr2_1:63180485-63180504 None:intergenic 35.0%
TGGAATAGAATCCAAGAAAG+TGG - chr2_1:63180736-63180755 Msa0216970:intron 35.0%
GGAATAGAATCCAAGAAAGT+GGG - chr2_1:63180737-63180756 Msa0216970:intron 35.0%
TGAAAATACAGCTTGCATAG+TGG + chr2_1:63180926-63180945 None:intergenic 35.0%
CAAATGCCTTCTTTAGACTT+TGG + chr2_1:63181061-63181080 None:intergenic 35.0%
!! AAGTCTAAAGAAGGCATTTG+AGG - chr2_1:63181061-63181080 Msa0216970:intron 35.0%
TTTCTTACAACTGCATGTTG+AGG + chr2_1:63181112-63181131 None:intergenic 35.0%
!! CATTTTTGTTGTCGTCATTC+TGG + chr2_1:63181555-63181574 None:intergenic 35.0%
TTCGTTATCCCTATGATCAA+GGG + chr2_1:63181768-63181787 None:intergenic 35.0%
TTTCGTTATCCCTATGATCA+AGG + chr2_1:63181769-63181788 None:intergenic 35.0%
TGAAGATGGGAGACAAAAAA+TGG + chr2_1:63182049-63182068 None:intergenic 35.0%
TGCTCCTAGTATTTGAAGAT+GGG + chr2_1:63182062-63182081 None:intergenic 35.0%
TTGCTCCTAGTATTTGAAGA+TGG + chr2_1:63182063-63182082 None:intergenic 35.0%
TTCAAATACTAGGAGCAAGA+AGG - chr2_1:63182065-63182084 Msa0216970:intron 35.0%
TCAAATACTAGGAGCAAGAA+GGG - chr2_1:63182066-63182085 Msa0216970:intron 35.0%
!!! AAAGTTTTGAACATACGTGG+TGG + chr2_1:63182095-63182114 None:intergenic 35.0%
TGTCGCATAGTAGAAAATTC+CGG + chr2_1:63182134-63182153 None:intergenic 35.0%
! ATTTTCTACTATGCGACAAC+AGG - chr2_1:63182136-63182155 Msa0216970:intron 35.0%
AGATCGTATCTTGTGTTCAT+CGG - chr2_1:63182721-63182740 Msa0216970:intron 35.0%
TGTTAGTTGCTTCATGCAAT+GGG + chr2_1:63182796-63182815 None:intergenic 35.0%
TTGTTAGTTGCTTCATGCAA+TGG + chr2_1:63182797-63182816 None:intergenic 35.0%
TTGCATGAAGCAACTAACAA+AGG - chr2_1:63182797-63182816 Msa0216970:intron 35.0%
ATGAAGCAACTAACAAAGGT+CGG - chr2_1:63182801-63182820 Msa0216970:intron 35.0%
GAAAGCAAAGAAACTTTCTG+AGG - chr2_1:63182933-63182952 Msa0216970:intron 35.0%
ACAATAAGCAAAGCTTGGAT+GGG + chr2_1:63183013-63183032 None:intergenic 35.0%
TACAATAAGCAAAGCTTGGA+TGG + chr2_1:63183014-63183033 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr2_1:63183318-63183337 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr2_1:63183317-63183336 Msa0216970:intron 35.0%
TTCCAATATGAACTACCGTA+AGG + chr2_1:63183420-63183439 None:intergenic 35.0%
CGGTAGTTCATATTGGAAAT+AGG - chr2_1:63183422-63183441 Msa0216970:intron 35.0%
! ACAGTTTTCTCAAACCAAAG+AGG - chr2_1:63183663-63183682 Msa0216970:intron 35.0%
TTTGAAGGACAAAACCTCTT+TGG + chr2_1:63183680-63183699 None:intergenic 35.0%
AACACAGTTCAGTTGCAAAA+AGG + chr2_1:63184298-63184317 None:intergenic 35.0%
! CTGTTGACCTTTTGATGTAA+AGG - chr2_1:63184360-63184379 Msa0216970:intron 35.0%
! TATTTCTGAATCATCCTCGA+CGG + chr2_1:63184548-63184567 None:intergenic 35.0%
! ACAATGTCTTCATTGGCTAA+AGG + chr2_1:63184571-63184590 None:intergenic 35.0%
CTGTGAAACAATGTCTTCAT+TGG + chr2_1:63184578-63184597 None:intergenic 35.0%
AAAGAAAACAACGAGAAACC+TGG + chr2_1:63184709-63184728 None:intergenic 35.0%
TCATTATTTCCGGCATATAC+AGG + chr2_1:63184763-63184782 None:intergenic 35.0%
ACATTTCTCTCAAGTATGTC+CGG - chr2_1:63184944-63184963 Msa0216970:intron 35.0%
TAATGGAATATTTGCTCTGC+AGG - chr2_1:63185012-63185031 Msa0216970:intron 35.0%
AATGGAATATTTGCTCTGCA+GGG - chr2_1:63185013-63185032 Msa0216970:intron 35.0%
TCGGATAAATCAGCATCATT+TGG + chr2_1:63185133-63185152 None:intergenic 35.0%
!! AATGATGCTGATTTATCCGA+TGG - chr2_1:63185133-63185152 Msa0216970:intron 35.0%
TAATGGTTATTCCCGAAGAA+TGG - chr2_1:63185296-63185315 Msa0216970:intron 35.0%
TGAAAACTTGTCCATTCTTC+GGG + chr2_1:63185310-63185329 None:intergenic 35.0%
GTCGTAATGAATTTCTCTCT+TGG - chr2_1:63185356-63185375 Msa0216970:CDS 35.0%
ACATCTTGAAAGATGGTAGA+TGG - chr2_1:63185455-63185474 Msa0216970:CDS 35.0%
CATCTTGAAAGATGGTAGAT+GGG - chr2_1:63185456-63185475 Msa0216970:CDS 35.0%
! TTTTAACGACAACAAGGTAG+GGG - chr2_1:63185483-63185502 Msa0216970:CDS 35.0%
!!! GCTATCTTTACTTTTTCGAG+AGG - chr2_1:63185533-63185552 Msa0216970:intron 35.0%
!!! AAGGGAGCAATTTTAGAACA+CGG + chr2_1:63185629-63185648 None:intergenic 35.0%
TAAAATTGCTCCCTTTGTCT+TGG - chr2_1:63185634-63185653 Msa0216970:intron 35.0%
!!! TGGCTGTCTCAACATTTTTT+TGG - chr2_1:63185680-63185699 Msa0216970:CDS 35.0%
!!! GGCTGTCTCAACATTTTTTT+GGG - chr2_1:63185681-63185700 Msa0216970:CDS 35.0%
CACATTCTCAGTTCCTAAAA+TGG + chr2_1:63185725-63185744 None:intergenic 35.0%
TATAGCGTTATGATGTGGTT+TGG - chr2_1:63185801-63185820 Msa0216970:five_prime_UTR 35.0%
! GTGACTTCGTTTTATAGATG+AGG + chr2_1:63185841-63185860 None:intergenic 35.0%
TATAAAACGAAGTCACCAGT+TGG - chr2_1:63185845-63185864 Msa0216970:five_prime_UTR 35.0%
! AGTGTTTCGTATCTTTGGAG+TGG + chr2_1:63175904-63175923 None:intergenic 40.0%
TAGAGAGAGAGAGAGAATCA+GGG + chr2_1:63175947-63175966 None:intergenic 40.0%
TTAGAGAGAGAGAGAGAATC+AGG + chr2_1:63175948-63175967 None:intergenic 40.0%
!!! CTTCGAGATTTTGGAACGAA+GGG + chr2_1:63175973-63175992 None:intergenic 40.0%
! TGCAGAAAGCTTCGAGATTT+TGG + chr2_1:63175982-63176001 None:intergenic 40.0%
ATTTGATCGGAGCAAATCCA+TGG + chr2_1:63176020-63176039 None:intergenic 40.0%
GAACTCGAGAGAGATTTGAT+CGG + chr2_1:63176033-63176052 None:intergenic 40.0%
TGCATTTGGGAAGGATTATG+TGG - chr2_1:63176285-63176304 Msa0216970:CDS 40.0%
GCATTTGGGAAGGATTATGT+GGG - chr2_1:63176286-63176305 Msa0216970:CDS 40.0%
! GGTTGGAACTTTGAAAAGAC+TGG - chr2_1:63176307-63176326 Msa0216970:CDS 40.0%
! AAACCTACCCTATTGGCTAT+AGG - chr2_1:63176394-63176413 Msa0216970:intron 40.0%
AAACCTATAGCCAATAGGGT+AGG + chr2_1:63176400-63176419 None:intergenic 40.0%
TGTTTATCCAAACAGGGTCA+TGG + chr2_1:63176750-63176769 None:intergenic 40.0%
!! TGCATCTGTAGGTATTGATG+GGG - chr2_1:63177228-63177247 Msa0216970:intron 40.0%
! TGGGGGATTTGATAACAATG+AGG - chr2_1:63177246-63177265 Msa0216970:intron 40.0%
! TCATAGAGAAGTCTTATGCC+GGG - chr2_1:63177415-63177434 Msa0216970:intron 40.0%
GATGCTATATTGCTAGATGC+GGG - chr2_1:63177496-63177515 Msa0216970:intron 40.0%
GATTGTCTGTCTTGTCACAT+TGG + chr2_1:63177645-63177664 None:intergenic 40.0%
GTGACAAGACAGACAATCTT+TGG - chr2_1:63177647-63177666 Msa0216970:intron 40.0%
AACTATTACTGCTGATCTGG+AGG - chr2_1:63177789-63177808 Msa0216970:intron 40.0%
! CACATACTTTTCCACTCGTT+CGG + chr2_1:63178231-63178250 None:intergenic 40.0%
TATCTTCATGTCAACCTCTC+CGG + chr2_1:63178413-63178432 None:intergenic 40.0%
! GGGTTCCCTGAGAATTATTT+TGG - chr2_1:63178490-63178509 Msa0216970:intron 40.0%
GGTCCACAAAAGATGCTTTA+AGG - chr2_1:63178567-63178586 Msa0216970:intron 40.0%
!! GACCCTTAAAGCATCTTTTG+TGG + chr2_1:63178573-63178592 None:intergenic 40.0%
!! GATGCTTTAAGGGTCAACTT+TGG - chr2_1:63178578-63178597 Msa0216970:intron 40.0%
!!! GAGTTGTCTCTTTTTTTGGG+CGG - chr2_1:63178727-63178746 Msa0216970:intron 40.0%
AGATCATAGACATGACAACG+TGG + chr2_1:63178884-63178903 None:intergenic 40.0%
!! GAAAGCATTAGCGAGAAAGT+TGG - chr2_1:63178968-63178987 Msa0216970:CDS 40.0%
AAGTTGGGTAGCACCTATTA+TGG - chr2_1:63178984-63179003 Msa0216970:CDS 40.0%
!!! AACAAAAGTGTTTTCCCACC+AGG + chr2_1:63179241-63179260 None:intergenic 40.0%
TAGAAGTAGAACAGAATGGG+AGG + chr2_1:63179494-63179513 None:intergenic 40.0%
!!! CTGAGGTAGCATTTGGTTTT+TGG + chr2_1:63179580-63179599 None:intergenic 40.0%
! AGATGTTTTCTCTTATCCGG+AGG - chr2_1:63179734-63179753 Msa0216970:intron 40.0%
TCCAACACATTATCATCCTC+CGG + chr2_1:63179753-63179772 None:intergenic 40.0%
GCTAGATGTTGTGCTAAAAG+TGG + chr2_1:63179777-63179796 None:intergenic 40.0%
! ACGCCTTTTTCCTTCTAATC+TGG - chr2_1:63180018-63180037 Msa0216970:intron 40.0%
AATCTGGTGAATGCTTTGTG+TGG - chr2_1:63180034-63180053 Msa0216970:intron 40.0%
GCTTTGTGTGGTAGCTAAAA+TGG - chr2_1:63180046-63180065 Msa0216970:intron 40.0%
GTGATTCGCAAAAGGACAAA+AGG + chr2_1:63180147-63180166 None:intergenic 40.0%
TGCTTAGAAGGGGAAAAAAC+TGG + chr2_1:63180475-63180494 None:intergenic 40.0%
! CAGGAAGTGGAACCAATTTT+TGG - chr2_1:63180760-63180779 Msa0216970:intron 40.0%
GTGTATCCAGGTCCAAAAAT+TGG + chr2_1:63180775-63180794 None:intergenic 40.0%
!! ATTTTTGGACCTGGATACAC+AGG - chr2_1:63180775-63180794 Msa0216970:intron 40.0%
!! TACACAGGATTGGTCAATCT+AGG - chr2_1:63180790-63180809 Msa0216970:intron 40.0%
! GATTGGTCAATCTAGGAAAC+AGG - chr2_1:63180797-63180816 Msa0216970:CDS 40.0%
ATCTAGGAAACAGGTAGAGT+TGG - chr2_1:63180806-63180825 Msa0216970:CDS 40.0%
!! TCTAAAGAAGGCATTTGAGG+AGG - chr2_1:63181064-63181083 Msa0216970:intron 40.0%
CAGAACATGACCAACAGAAA+AGG + chr2_1:63181172-63181191 None:intergenic 40.0%
TTGCACATGGTTTACTGTCT+GGG - chr2_1:63181429-63181448 Msa0216970:intron 40.0%
ATATTCCGTTCCACAAGTTG+AGG - chr2_1:63181454-63181473 Msa0216970:intron 40.0%
ACATACCTCAACTTGTGGAA+CGG + chr2_1:63181462-63181481 None:intergenic 40.0%
GTCTCCCATCTTCAAATACT+AGG - chr2_1:63182055-63182074 Msa0216970:intron 40.0%
GCATAGTAGAAAATTCCGGA+TGG + chr2_1:63182130-63182149 None:intergenic 40.0%
!! TGATCTTCTACCGGTTTATG+GGG + chr2_1:63182301-63182320 None:intergenic 40.0%
!! CTGATCTTCTACCGGTTTAT+GGG + chr2_1:63182302-63182321 None:intergenic 40.0%
!! TCTGATCTTCTACCGGTTTA+TGG + chr2_1:63182303-63182322 None:intergenic 40.0%
CCACTTGGTCAAGAAAATGA+AGG + chr2_1:63182640-63182659 None:intergenic 40.0%
! CCTTCATTTTCTTGACCAAG+TGG - chr2_1:63182637-63182656 Msa0216970:intron 40.0%
TAATGCTGGGAAAACTGAAC+TGG - chr2_1:63182667-63182686 Msa0216970:intron 40.0%
ACCAAACTTGAAACTCCTTG+CGG + chr2_1:63182696-63182715 None:intergenic 40.0%
GATCGTATCTTGTGTTCATC+GGG - chr2_1:63182722-63182741 Msa0216970:intron 40.0%
GGTAGTTCATATTGGGCAAA+GGG - chr2_1:63183218-63183237 Msa0216970:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr2_1:63183292-63183311 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr2_1:63183323-63183342 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr2_1:63183324-63183343 None:intergenic 40.0%
TATGAACTACCGTAAGGTCA+CGG + chr2_1:63183414-63183433 None:intergenic 40.0%
GACCTTACGGTAGTTCATAT+TGG - chr2_1:63183415-63183434 Msa0216970:intron 40.0%
CAGTAAAGGAATGCTACACT+TGG + chr2_1:63183731-63183750 None:intergenic 40.0%
GCTAAAACTCTATAACCTGC+AGG - chr2_1:63183785-63183804 Msa0216970:intron 40.0%
AAACTCTATAACCTGCAGGT+CGG - chr2_1:63183789-63183808 Msa0216970:intron 40.0%
GACATCATTTCCGGATTATC+TGG - chr2_1:63183819-63183838 Msa0216970:intron 40.0%
ATGTGCAACACCAGATAATC+CGG + chr2_1:63183832-63183851 None:intergenic 40.0%
!! GCACATGCGCAAATTTGTTA+TGG - chr2_1:63183846-63183865 Msa0216970:intron 40.0%
!! CATGCGCAAATTTGTTATGG+AGG - chr2_1:63183849-63183868 Msa0216970:intron 40.0%
!! CGCAAATTTGTTATGGAGGA+GGG - chr2_1:63183853-63183872 Msa0216970:intron 40.0%
!! AATTTGTTATGGAGGAGGGA+TGG - chr2_1:63183857-63183876 Msa0216970:intron 40.0%
!! ATTTGTTATGGAGGAGGGAT+GGG - chr2_1:63183858-63183877 Msa0216970:intron 40.0%
AGCAAACTGCATTTGTGAGA+CGG + chr2_1:63184164-63184183 None:intergenic 40.0%
! TGCTGGATTTGAAGCATATG+TGG + chr2_1:63184256-63184275 None:intergenic 40.0%
ACAGTTCAGTTGCAAAAAGG+AGG + chr2_1:63184295-63184314 None:intergenic 40.0%
ATTTCTGAATCATCCTCGAC+GGG + chr2_1:63184547-63184566 None:intergenic 40.0%
TGAAGACATTGTTTCACAGC+TGG - chr2_1:63184579-63184598 Msa0216970:intron 40.0%
! TGTTTCACAGCTGGTTTCTA+TGG - chr2_1:63184588-63184607 Msa0216970:intron 40.0%
! GTTTCACAGCTGGTTTCTAT+GGG - chr2_1:63184589-63184608 Msa0216970:intron 40.0%
! CAGCTTTTTGACAGTGAATC+TGG + chr2_1:63184621-63184640 None:intergenic 40.0%
ATCAAATGCTGGAGTAGAAG+AGG - chr2_1:63184651-63184670 Msa0216970:intron 40.0%
ATCTAGGTACCTGTATATGC+CGG - chr2_1:63184751-63184770 Msa0216970:intron 40.0%
GTAGCATATCAACTTTCGAC+TGG + chr2_1:63184850-63184869 None:intergenic 40.0%
ACATTGAGAAAGCAACAGAC+TGG - chr2_1:63185041-63185060 Msa0216970:intron 40.0%
AGTAGCATCCATGTTGGAAA+CGG + chr2_1:63185089-63185108 None:intergenic 40.0%
ACTGCATCAAACACTACATC+TGG - chr2_1:63185106-63185125 Msa0216970:intron 40.0%
!! TTTCTCTCTTGGTTTTCCAC+AGG - chr2_1:63185367-63185386 Msa0216970:CDS 40.0%
!! TTCCACAGGATATCGACTTA+TGG - chr2_1:63185381-63185400 Msa0216970:CDS 40.0%
!! TCCACAGGATATCGACTTAT+GGG - chr2_1:63185382-63185401 Msa0216970:CDS 40.0%
ATGGGAATTGTTAGCCACAT+TGG - chr2_1:63185400-63185419 Msa0216970:CDS 40.0%
GTTGCACACATCTTGAAAGA+TGG - chr2_1:63185448-63185467 Msa0216970:CDS 40.0%
ATTAATCCTCCCAAGGACAT+GGG - chr2_1:63185511-63185530 Msa0216970:intron 40.0%
TAAAGATAGCCCATGTCCTT+GGG + chr2_1:63185523-63185542 None:intergenic 40.0%
TAACAAGCGACCAAGACAAA+GGG + chr2_1:63185647-63185666 None:intergenic 40.0%
TTAACAAGCGACCAAGACAA+AGG + chr2_1:63185648-63185667 None:intergenic 40.0%
AATGTTGAGACAGCCAATGA+GGG + chr2_1:63185676-63185695 None:intergenic 40.0%
AAATGTTGAGACAGCCAATG+AGG + chr2_1:63185677-63185696 None:intergenic 40.0%
!!! GCTTCGAGATTTTGGAACGA+AGG + chr2_1:63175974-63175993 None:intergenic 45.0%
TTCTTGCTTGTAGACGCGAT+TGG + chr2_1:63176071-63176090 None:intergenic 45.0%
TTGGGAAGGATTATGTGGGT+TGG - chr2_1:63176290-63176309 Msa0216970:CDS 45.0%
TGTGAAGAAGACGAAGAAGC+CGG - chr2_1:63176348-63176367 Msa0216970:CDS 45.0%
TTCTTCAAAGGCCTGTCTTC+CGG + chr2_1:63176376-63176395 None:intergenic 45.0%
GTATAAGCCATGACCCTGTT+TGG - chr2_1:63176740-63176759 Msa0216970:intron 45.0%
! TGGTTGTTGAGTTGTTGGCT+TGG - chr2_1:63177143-63177162 Msa0216970:CDS 45.0%
!! GCATCTGTAGGTATTGATGG+GGG - chr2_1:63177229-63177248 Msa0216970:intron 45.0%
TTCTCCGGTAATTCCACAGA+AGG + chr2_1:63177331-63177350 None:intergenic 45.0%
TTCTGTGGAATTACCGGAGA+AGG - chr2_1:63177330-63177349 Msa0216970:intron 45.0%
TGGGCAACAAATACCTTCTC+CGG + chr2_1:63177346-63177365 None:intergenic 45.0%
! CATAGAGAAGTCTTATGCCG+GGG - chr2_1:63177416-63177435 Msa0216970:intron 45.0%
! GTGTTGTTATTCCCCCAACT+GGG - chr2_1:63177608-63177627 Msa0216970:intron 45.0%
ACTGATGGAGTGATCCTTTG+TGG - chr2_1:63177679-63177698 Msa0216970:intron 45.0%
CTGATGGAGTGATCCTTTGT+GGG - chr2_1:63177680-63177699 Msa0216970:intron 45.0%
TCCTTTGTGGGAGGAAAAAC+TGG - chr2_1:63177692-63177711 Msa0216970:intron 45.0%
CCTTTGTGGGAGGAAAAACT+GGG - chr2_1:63177693-63177712 Msa0216970:intron 45.0%
AGGAAAAACTGGGATGGAAG+TGG - chr2_1:63177703-63177722 Msa0216970:CDS 45.0%
AAAAACTGGGATGGAAGTGG+CGG - chr2_1:63177706-63177725 Msa0216970:CDS 45.0%
CGGAACTATTACTGCTGATC+TGG - chr2_1:63177786-63177805 Msa0216970:intron 45.0%
TCATGAGCTTAATCCCCCTA+TGG + chr2_1:63178304-63178323 None:intergenic 45.0%
ATGCCTAACCCACATAAGGT+GGG + chr2_1:63179025-63179044 None:intergenic 45.0%
ACACATGCCTAACCCACATA+AGG + chr2_1:63179029-63179048 None:intergenic 45.0%
! CAGAAGAACTGTAGAAGCAC+CGG - chr2_1:63179050-63179069 Msa0216970:CDS 45.0%
!! AGCAACTCTGAGGTAGCATT+TGG + chr2_1:63179587-63179606 None:intergenic 45.0%
! TCCGGAGGATGATAATGTGT+TGG - chr2_1:63179749-63179768 Msa0216970:intron 45.0%
! ACACCTAGTAATCTTTGGGG+TGG - chr2_1:63180285-63180304 Msa0216970:intron 45.0%
GAACCACCCCAAAGATTACT+AGG + chr2_1:63180291-63180310 None:intergenic 45.0%
!! AGTAATCTTTGGGGTGGTTC+TGG - chr2_1:63180291-63180310 Msa0216970:CDS 45.0%
!! GTAATCTTTGGGGTGGTTCT+GGG - chr2_1:63180292-63180311 Msa0216970:CDS 45.0%
CTGGCCAAGTAATTGGACAT+TGG + chr2_1:63180456-63180475 None:intergenic 45.0%
TAGAATCCAAGAAAGTGGGC+AGG - chr2_1:63180741-63180760 Msa0216970:intron 45.0%
!! GTGGAACCAATTTTTGGACC+TGG - chr2_1:63180766-63180785 Msa0216970:intron 45.0%
TTGACCAATCCTGTGTATCC+AGG + chr2_1:63180787-63180806 None:intergenic 45.0%
CAGCACGATCTTTCTCTTCA+AGG - chr2_1:63180944-63180963 Msa0216970:CDS 45.0%
! TCTAGGACGAAACTTGCACA+TGG - chr2_1:63181416-63181435 Msa0216970:intron 45.0%
CTTGCACATGGTTTACTGTC+TGG - chr2_1:63181428-63181447 Msa0216970:intron 45.0%
CTAGCACATACCTCAACTTG+TGG + chr2_1:63181467-63181486 None:intergenic 45.0%
AAAGCTCACCGCAGATTTAG+GGG + chr2_1:63181587-63181606 None:intergenic 45.0%
GAAAGCTCACCGCAGATTTA+GGG + chr2_1:63181588-63181607 None:intergenic 45.0%
AGAAAGCTCACCGCAGATTT+AGG + chr2_1:63181589-63181608 None:intergenic 45.0%
CATGATCGTACAAGTCAGCA+AGG + chr2_1:63181633-63181652 None:intergenic 45.0%
GGAGACAAAAAATGGTCACG+AGG + chr2_1:63182041-63182060 None:intergenic 45.0%
TTTAGTTGCTGCTAGCCATC+CGG - chr2_1:63182112-63182131 Msa0216970:intron 45.0%
GGTCAGGTGGCTATTTACTA+AGG + chr2_1:63182280-63182299 None:intergenic 45.0%
CCAAACTTGAAACTCCTTGC+GGG + chr2_1:63182695-63182714 None:intergenic 45.0%
TGATGAGGTTGTACGTCCAA+GGG - chr2_1:63183056-63183075 Msa0216970:intron 45.0%
CTTGCAAGGCAAGCTTCTAA+AGG + chr2_1:63183084-63183103 None:intergenic 45.0%
CCAATATGAACTACCGTGCA+CGG + chr2_1:63183213-63183232 None:intergenic 45.0%
CGTGCACGGTAGTTCATATT+GGG - chr2_1:63183211-63183230 Msa0216970:intron 45.0%
CGGTAGTTCATATTGGGCAA+AGG - chr2_1:63183217-63183236 Msa0216970:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr2_1:63183293-63183312 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr2_1:63183296-63183315 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr2_1:63183328-63183347 Msa0216970:intron 45.0%
GTTGTTGTCATGTGACCGTA+AGG + chr2_1:63183368-63183387 None:intergenic 45.0%
ATGAACTACCGTAAGGTCAC+GGG + chr2_1:63183413-63183432 None:intergenic 45.0%
!! GCTCAAGACAATGGCTTTGA+AGG + chr2_1:63183695-63183714 None:intergenic 45.0%
CATCTACTCGCTCAAGACAA+TGG + chr2_1:63183704-63183723 None:intergenic 45.0%
!! GCGCAAATTTGTTATGGAGG+AGG - chr2_1:63183852-63183871 Msa0216970:intron 45.0%
GGATGGGTACCCAAAAAACT+TGG - chr2_1:63183874-63183893 Msa0216970:intron 45.0%
ATCAGTCACATGCGTAGCAA+AGG - chr2_1:63184010-63184029 Msa0216970:CDS 45.0%
GTAGCAAAGGTCATCAACCT+GGG - chr2_1:63184023-63184042 Msa0216970:CDS 45.0%
TAGCAAAGGTCATCAACCTG+GGG - chr2_1:63184024-63184043 Msa0216970:CDS 45.0%
AATAACTACGTACCCCCATC+TGG + chr2_1:63184061-63184080 None:intergenic 45.0%
GGCATTAGCCCACATAACAT+AGG + chr2_1:63184440-63184459 None:intergenic 45.0%
GAGTAGAAGAGGCAATGACT+TGG - chr2_1:63184662-63184681 Msa0216970:intron 45.0%
! GACTTGGTTACTAGCTCACA+TGG - chr2_1:63184678-63184697 Msa0216970:intron 45.0%
TTGGTTACTAGCTCACATGG+AGG - chr2_1:63184681-63184700 Msa0216970:intron 45.0%
ATTGATGCTCCCATTTCGAG+AGG - chr2_1:63184803-63184822 Msa0216970:intron 45.0%
TTGATGCTCCCATTTCGAGA+GGG - chr2_1:63184804-63184823 Msa0216970:intron 45.0%
TCAAGATGACGTTGCTCGAA+AGG - chr2_1:63184883-63184902 Msa0216970:intron 45.0%
!! TCGAAAGGCACTGATAGCAT+CGG - chr2_1:63184898-63184917 Msa0216970:intron 45.0%
TCTCTCAAGTATGTCCGGTT+TGG - chr2_1:63184949-63184968 Msa0216970:intron 45.0%
ATGTTGGAAACGGATGCATC+GGG + chr2_1:63185079-63185098 None:intergenic 45.0%
CATGTTGGAAACGGATGCAT+CGG + chr2_1:63185080-63185099 None:intergenic 45.0%
TGATGCAGTAGCATCCATGT+TGG + chr2_1:63185095-63185114 None:intergenic 45.0%
!! GATGCTGATTTATCCGATGG+AGG - chr2_1:63185136-63185155 Msa0216970:intron 45.0%
TCCCATAAGTCGATATCCTG+TGG + chr2_1:63185386-63185405 None:intergenic 45.0%
AGTGTGTTGAGGTTCCAATG+TGG + chr2_1:63185417-63185436 None:intergenic 45.0%
ATTGGAACCTCAACACACTG+CGG - chr2_1:63185418-63185437 Msa0216970:CDS 45.0%
CATGTCCTTGGGAGGATTAA+TGG + chr2_1:63185512-63185531 None:intergenic 45.0%
CATTAATCCTCCCAAGGACA+TGG - chr2_1:63185510-63185529 Msa0216970:intron 45.0%
GTAAAGATAGCCCATGTCCT+TGG + chr2_1:63185524-63185543 None:intergenic 45.0%
! GTCTTGGTCGCTTGTTAAAC+TGG - chr2_1:63185650-63185669 Msa0216970:CDS 45.0%
CTTGTTAAACTGGCCCTCAT+TGG - chr2_1:63185660-63185679 Msa0216970:CDS 45.0%
AAACGAAGTCACCAGTTGGT+TGG - chr2_1:63185849-63185868 Msa0216970:five_prime_UTR 45.0%
AACGAAGTCACCAGTTGGTT+GGG - chr2_1:63185850-63185869 Msa0216970:five_prime_UTR 45.0%
AGTGTATTCTCCCAACCAAC+TGG + chr2_1:63185863-63185882 None:intergenic 45.0%
!!! AATTATTATCATAAAATTTT+TGG - chr2_1:63182380-63182399 Msa0216970:intron 5.0%
CAACTGCTTCAACACCACCA+TGG - chr2_1:63176000-63176019 Msa0216970:three_prime_UTR 50.0%
TGATCGGAGCAAATCCATGG+TGG + chr2_1:63176017-63176036 None:intergenic 50.0%
TGCTTGTAGACGCGATTGGT+GGG + chr2_1:63176067-63176086 None:intergenic 50.0%
TTGCTTGTAGACGCGATTGG+TGG + chr2_1:63176068-63176087 None:intergenic 50.0%
!! GGTGTTGTTATTCCCCCAAC+TGG - chr2_1:63177607-63177626 Msa0216970:intron 50.0%
! TTGTTATTCCCCCAACTGGG+TGG - chr2_1:63177611-63177630 Msa0216970:intron 50.0%
ATGGAGTGATCCTTTGTGGG+AGG - chr2_1:63177683-63177702 Msa0216970:intron 50.0%
! CCCAGTTTTTCCTCCCACAA+AGG + chr2_1:63177696-63177715 None:intergenic 50.0%
TGTGGGAGGAAAAACTGGGA+TGG - chr2_1:63177697-63177716 Msa0216970:CDS 50.0%
TACCCACTCGCTGTAAAGCT+CGG - chr2_1:63177766-63177785 Msa0216970:intron 50.0%
TTCCGAGCTTTACAGCGAGT+GGG + chr2_1:63177771-63177790 None:intergenic 50.0%
TGCCTAACCCACATAAGGTG+GGG + chr2_1:63179024-63179043 None:intergenic 50.0%
CATGCCTAACCCACATAAGG+TGG + chr2_1:63179026-63179045 None:intergenic 50.0%
TATGAGGTCTCGAGCTCAGA+AGG + chr2_1:63180404-63180423 None:intergenic 50.0%
TGGACCTGGATACACAGGAT+TGG - chr2_1:63180780-63180799 Msa0216970:intron 50.0%
TGCATGTTGAGGTCCACAGT+TGG + chr2_1:63181101-63181120 None:intergenic 50.0%
TGCAAGCACCCCTAAATCTG+CGG - chr2_1:63181576-63181595 Msa0216970:intron 50.0%
!! TTCTACCGGTTTATGGGGTC+AGG + chr2_1:63182296-63182315 None:intergenic 50.0%
AAGTGGAGCGTGCTAATGCT+GGG - chr2_1:63182654-63182673 Msa0216970:intron 50.0%
AAACTGAACTGGATCCCGCA+AGG - chr2_1:63182678-63182697 Msa0216970:intron 50.0%
!! CCCGCAAGGAGTTTCAAGTT+TGG - chr2_1:63182692-63182711 Msa0216970:intron 50.0%
! GTTGTGTAGGTCTGGTGATG+AGG - chr2_1:63183041-63183060 Msa0216970:intron 50.0%
GTGATGAGGTTGTACGTCCA+AGG - chr2_1:63183055-63183074 Msa0216970:intron 50.0%
!! CAAGCTTCTAAAGGCACCCT+TGG + chr2_1:63183075-63183094 None:intergenic 50.0%
CCGTGCACGGTAGTTCATAT+TGG - chr2_1:63183210-63183229 Msa0216970:intron 50.0%
ATATTGGGCAAAGGGCAACC+CGG - chr2_1:63183226-63183245 Msa0216970:intron 50.0%
GACTTGAACCCGTGACCTTA+CGG - chr2_1:63183350-63183369 Msa0216970:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG + chr2_1:63183361-63183380 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG + chr2_1:63183362-63183381 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr2_1:63183384-63183403 Msa0216970:intron 50.0%
CAAGGTTACCCGTGACCTTA+CGG - chr2_1:63183402-63183421 Msa0216970:intron 50.0%
!! GGCTGGTCTGACATCATTTC+CGG - chr2_1:63183810-63183829 Msa0216970:intron 50.0%
CGTAGCAAAGGTCATCAACC+TGG - chr2_1:63184022-63184041 Msa0216970:CDS 50.0%
GGGAAGAGCTTCTACCAGAT+GGG - chr2_1:63184044-63184063 Msa0216970:CDS 50.0%
GGAAGAGCTTCTACCAGATG+GGG - chr2_1:63184045-63184064 Msa0216970:CDS 50.0%
GAAGAGCTTCTACCAGATGG+GGG - chr2_1:63184046-63184065 Msa0216970:CDS 50.0%
!! TCAAGTATGTCCGGTTTGGC+CGG - chr2_1:63184953-63184972 Msa0216970:intron 50.0%
GACAATGTATCCGGCCAAAC+CGG + chr2_1:63184966-63184985 None:intergenic 50.0%
GGAATATTTGCTCTGCAGGG+TGG - chr2_1:63185016-63185035 Msa0216970:intron 50.0%
CGATGCATCCGTTTCCAACA+TGG - chr2_1:63185078-63185097 Msa0216970:intron 50.0%
! GCTGATTTATCCGATGGAGG+AGG - chr2_1:63185139-63185158 Msa0216970:intron 50.0%
CAACTCACTTCCTCCTCCAT+CGG + chr2_1:63185152-63185171 None:intergenic 50.0%
ATAGTGACCGCAGTGTGTTG+AGG + chr2_1:63185428-63185447 None:intergenic 50.0%
GGCTTCCATTAATCCTCCCA+AGG - chr2_1:63185504-63185523 Msa0216970:intron 50.0%
!! AGACGCGATTGGTGGGTTCT+GGG + chr2_1:63176060-63176079 None:intergenic 55.0%
!! TAGACGCGATTGGTGGGTTC+TGG + chr2_1:63176061-63176080 None:intergenic 55.0%
! GAAGACGAAGAAGCCGGTTC+CGG - chr2_1:63176354-63176373 Msa0216970:CDS 55.0%
AAAGGCCTGTCTTCCGGAAC+CGG + chr2_1:63176370-63176389 None:intergenic 55.0%
!! TGCTAGATGCGGGTGCTGAA+CGG - chr2_1:63177506-63177525 Msa0216970:intron 55.0%
GGAAGGAGCAAGTTGCAGCA+TGG - chr2_1:63177527-63177546 Msa0216970:intron 55.0%
GAGCATTTCCACCCAGTTGG+GGG + chr2_1:63177622-63177641 None:intergenic 55.0%
! GGAGCATTTCCACCCAGTTG+GGG + chr2_1:63177623-63177642 None:intergenic 55.0%
!! GGGAGCATTTCCACCCAGTT+GGG + chr2_1:63177624-63177643 None:intergenic 55.0%
!! TGGGAGCATTTCCACCCAGT+TGG + chr2_1:63177625-63177644 None:intergenic 55.0%
GTTCCGAGCTTTACAGCGAG+TGG + chr2_1:63177772-63177791 None:intergenic 55.0%
CCACTCGTTCGGCATACTCT+TGG + chr2_1:63178220-63178239 None:intergenic 55.0%
! CCAAGAGTATGCCGAACGAG+TGG - chr2_1:63178217-63178236 Msa0216970:intron 55.0%
TTGCTGAGCCCCACCTTATG+TGG - chr2_1:63179013-63179032 Msa0216970:CDS 55.0%
TGCTGAGCCCCACCTTATGT+GGG - chr2_1:63179014-63179033 Msa0216970:CDS 55.0%
AGCCCCACCTTATGTGGGTT+AGG - chr2_1:63179019-63179038 Msa0216970:CDS 55.0%
CCACTTCCTGCCCACTTTCT+TGG + chr2_1:63180750-63180769 None:intergenic 55.0%
CCAAGAAAGTGGGCAGGAAG+TGG - chr2_1:63180747-63180766 Msa0216970:intron 55.0%
AGGTCCACAGTTGGATCAGC+AGG + chr2_1:63181092-63181111 None:intergenic 55.0%
AGCCACCTGACCCCATAAAC+CGG - chr2_1:63182288-63182307 Msa0216970:intron 55.0%
!! TACCGGTTTATGGGGTCAGG+TGG + chr2_1:63182293-63182312 None:intergenic 55.0%
CAGCATTAGCACGCTCCACT+TGG + chr2_1:63182655-63182674 None:intergenic 55.0%
CAAGTGGAGCGTGCTAATGC+TGG - chr2_1:63182653-63182672 Msa0216970:intron 55.0%
ACTGAAGCTCCCGCATATGC+AGG - chr2_1:63183252-63183271 Msa0216970:intron 55.0%
CTGAAGCTCCCGCATATGCA+GGG - chr2_1:63183253-63183272 Msa0216970:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr2_1:63183349-63183368 None:intergenic 55.0%
CGTAAGGTCACGGGTAACCT+TGG + chr2_1:63183404-63183423 None:intergenic 55.0%
TCTATAACCTGCAGGTCGGC+TGG - chr2_1:63183793-63183812 Msa0216970:intron 55.0%
TCTGGTAGAAGCTCTTCCCC+AGG + chr2_1:63184043-63184062 None:intergenic 55.0%
GGGGAAGAGCTTCTACCAGA+TGG - chr2_1:63184043-63184062 Msa0216970:CDS 55.0%
CTAGCTCACATGGAGGATCC+AGG - chr2_1:63184688-63184707 Msa0216970:intron 55.0%
AGATAGCCCATGTCCTTGGG+AGG + chr2_1:63185520-63185539 None:intergenic 55.0%
! AGAAGCCGGTTCCGGAAGAC+AGG - chr2_1:63176362-63176381 Msa0216970:intron 60.0%
!! AGATGCGGGTGCTGAACGGA+AGG - chr2_1:63177510-63177529 Msa0216970:intron 60.0%
ACTGCTGATCTGGAGGCAGC+AGG - chr2_1:63177796-63177815 Msa0216970:intron 60.0%
GGCTCCTGCTGATCCAACTG+TGG - chr2_1:63181085-63181104 Msa0216970:intron 60.0%
CGGGAGCTGAGAAGCTTGCA+AGG + chr2_1:63183098-63183117 None:intergenic 60.0%
TGCAAGCTTCTCAGCTCCCG+AGG - chr2_1:63183098-63183117 Msa0216970:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr2_1:63183248-63183267 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr2_1:63183264-63183283 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr2_1:63183265-63183284 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr2_1:63183264-63183283 Msa0216970:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr2_1:63183265-63183284 Msa0216970:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr2_1:63183280-63183299 None:intergenic 60.0%
ACGGGTAACCTTGGCGCAAC+TGG + chr2_1:63183395-63183414 None:intergenic 60.0%
GTGTTGCACAGTACCCGTCG+AGG - chr2_1:63184531-63184550 Msa0216970:intron 60.0%
GAGCCACGCCCTCTCGAAAT+GGG + chr2_1:63184815-63184834 None:intergenic 60.0%
AGAGCCACGCCCTCTCGAAA+TGG + chr2_1:63184816-63184835 None:intergenic 60.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr2_1:63183247-63183266 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr2_1:63183258-63183277 Msa0216970:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr2_1:63183259-63183278 Msa0216970:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr2_1:63183263-63183282 Msa0216970:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr2_1:63183278-63183297 Msa0216970:intron 65.0%
TGTCAGACCAGCCGACCTGC+AGG + chr2_1:63183803-63183822 None:intergenic 65.0%
GCTCCCATTTCGAGAGGGCG+TGG - chr2_1:63184809-63184828 Msa0216970:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 63175869 63185893 63175869 ID=Msa0216970;Name=Msa0216970
chr2_1 mRNA 63175869 63185893 63175869 ID=Msa0216970-mRNA-1;Parent=Msa0216970;Name=Msa0216970-mRNA-1;_AED=0.12;_eAED=0.12;_QI=150|0.9|0.85|1|0.85|0.80|21|332|779
chr2_1 exon 63175869 63176373 63175869 ID=Msa0216970-mRNA-1:exon:17606;Parent=Msa0216970-mRNA-1
chr2_1 exon 63176599 63176728 63176599 ID=Msa0216970-mRNA-1:exon:17605;Parent=Msa0216970-mRNA-1
chr2_1 exon 63176843 63176961 63176843 ID=Msa0216970-mRNA-1:exon:17604;Parent=Msa0216970-mRNA-1
chr2_1 exon 63177053 63177220 63177053 ID=Msa0216970-mRNA-1:exon:17603;Parent=Msa0216970-mRNA-1
chr2_1 exon 63177695 63177784 63177695 ID=Msa0216970-mRNA-1:exon:17602;Parent=Msa0216970-mRNA-1
chr2_1 exon 63177867 63177955 63177867 ID=Msa0216970-mRNA-1:exon:17601;Parent=Msa0216970-mRNA-1
chr2_1 exon 63178590 63178712 63178590 ID=Msa0216970-mRNA-1:exon:17600;Parent=Msa0216970-mRNA-1
chr2_1 exon 63178797 63178854 63178797 ID=Msa0216970-mRNA-1:exon:17599;Parent=Msa0216970-mRNA-1
chr2_1 exon 63178944 63179100 63178944 ID=Msa0216970-mRNA-1:exon:17598;Parent=Msa0216970-mRNA-1
chr2_1 exon 63179605 63179685 63179605 ID=Msa0216970-mRNA-1:exon:17597;Parent=Msa0216970-mRNA-1
chr2_1 exon 63180165 63180206 63180165 ID=Msa0216970-mRNA-1:exon:17596;Parent=Msa0216970-mRNA-1
chr2_1 exon 63180287 63180341 63180287 ID=Msa0216970-mRNA-1:exon:17595;Parent=Msa0216970-mRNA-1
chr2_1 exon 63180639 63180716 63180639 ID=Msa0216970-mRNA-1:exon:17594;Parent=Msa0216970-mRNA-1
chr2_1 exon 63180797 63180853 63180797 ID=Msa0216970-mRNA-1:exon:17593;Parent=Msa0216970-mRNA-1
chr2_1 exon 63180944 63181077 63180944 ID=Msa0216970-mRNA-1:exon:17592;Parent=Msa0216970-mRNA-1
chr2_1 exon 63181932 63182026 63181932 ID=Msa0216970-mRNA-1:exon:17591;Parent=Msa0216970-mRNA-1
chr2_1 exon 63183945 63184167 63183945 ID=Msa0216970-mRNA-1:exon:17590;Parent=Msa0216970-mRNA-1
chr2_1 exon 63184195 63184281 63184195 ID=Msa0216970-mRNA-1:exon:17589;Parent=Msa0216970-mRNA-1
chr2_1 exon 63184411 63184523 63184411 ID=Msa0216970-mRNA-1:exon:17588;Parent=Msa0216970-mRNA-1
chr2_1 exon 63185347 63185518 63185347 ID=Msa0216970-mRNA-1:exon:17587;Parent=Msa0216970-mRNA-1
chr2_1 exon 63185648 63185893 63185648 ID=Msa0216970-mRNA-1:exon:17586;Parent=Msa0216970-mRNA-1
chr2_1 five_prime_UTR 63185744 63185893 63185744 ID=Msa0216970-mRNA-1:five_prime_utr;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63185648 63185743 63185648 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63185347 63185518 63185347 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63184411 63184523 63184411 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63184195 63184281 63184195 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63183945 63184167 63183945 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63181932 63182026 63181932 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63180944 63181077 63180944 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63180797 63180853 63180797 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63180639 63180716 63180639 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63180287 63180341 63180287 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63180165 63180206 63180165 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63179605 63179685 63179605 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63178944 63179100 63178944 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63178797 63178854 63178797 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63178590 63178712 63178590 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63177867 63177955 63177867 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63177695 63177784 63177695 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63177053 63177220 63177053 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63176843 63176961 63176843 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63176599 63176728 63176599 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 CDS 63176201 63176373 63176201 ID=Msa0216970-mRNA-1:cds;Parent=Msa0216970-mRNA-1
chr2_1 three_prime_UTR 63175869 63176200 63175869 ID=Msa0216970-mRNA-1:three_prime_utr;Parent=Msa0216970-mRNA-1
Gene Sequence

>Msa0216970

ATGGATTTGCTCCGATCAAATCTCTCTCGAGTTCGAATCCCAGAACCCACCAATCGCGTCTACAAGCAAGAATGCTGCTTATCGTTCGACACTCCTATGTCAGAAGGTGGGTTGTTCATCGACATGTTCAATTTTCTTGCATTTGGGAAGGATTATGTGGGTTGGAACTTTGAAAAGACTGGAAATCCGGTTTATTTGCATGTGAAGAAGACGAAGAAGCCGGTTCCGGAAGACAGGCCTTTGAAGAAACCTACCCTATTGGCTATAGGTATTGATGGGGGATTTGATAACAATGAGGCTGACTATGAAGAAACTCATAATATTGTTATATTACCTGACTATGTTTCACTTTCATATCCTTCTGTGGAATTACCGGAGAAGGTAAGGTTGGCGGCTGATGCTATATTGCTAGATGCGGGTGCTGAACGGAAGGAGCAAGTTGCAGCATGGACAGCTGATAAGAAACTACAAATTGACAATGGTGTTGTTATTCCCCCAACTGGGTGGAAATGCTCCCAATGTGACAAGACAGACAATCTTTGGTTAAATTTGACTGATGGAGTGATCCTTTGTGGGAGGAAAAACTGGGATGGAAGTGGCGGAAACAATCATGCAGTTGAACATTACAAAAAGACAGGCTACCCACTCGCTGTAAAGCTCGGAACTATTACTGCTGATCTGGAGGCAGCAGATGTTTTCTCTTATCCGGAGGATGATAATGTGTTGGATCCACTTTTAGCACAACATCTAGCATTTTTTGGCATTGATTTCTCATCACTACAAAAGACTGAAATGACTACGGCTGAAAAAGAACTCGACCAAAATACCAATTTTGAATGGAATAGAATCCAAGAAAGTGGGCAGGAAGTGGAACCAATTTTTGGACCTGGATACACAGGATTGGTCAATCTAGGAAACAGTTGTTATTTGGCAGCCACTATGCAAGCTGTATTTTCAGCACGATCTTTCTCTTCAAGGTACTATATAAACCAAAGTCTAAAGAAGGCATTTGAGGAGGCTCCTGCTGATCCAACTGTGGACCTCAACATGCAGTTGACGAAACTTGCACATGGTTTACTGTCTGGGAAATATTCCGTTCCACAAGTTGAGAATGACGACAACAAAAATGTTGCAAGCACCCCTAAATCTGCGGAGCAAGAAGGGATACCACCACGTATGTTCAAAACTTTAGTTGCTGCTAGCCATCCGGAATTTTCTACTATGCGACAACAGCGTGCTAATGCTGGGAAAACTGAACTGGATCCCGCAAGGAGTTTCAAGTTTGGTGTTGAAGATCGTATCTTGTGTTCATCGGGAAAAGTTGCATACAATAGAAGGAATGACTACATTCTTTCTCTGAATATCCCATTGCATGAAGCAACTAACAAAGAAGAATTGGAATTGTTTCACAAGATGAAAGCAAAGAAACTTTCTGAGGGAAAAGAAGTGTCTGGTGATGAGGTTGTACGTCCAAGGGTGCCTTTAGAAGCTTGCCTTGCAAGCTTCTCAGCTCCCGAGGAGATACATGATTTTTACAGCACTGCTCTGCAAACGAAGACAACAGCAGTAAAGTCGGCTGGTCTGACATCATTTCCGGATTATCTGGTGTTGCACATGCGCAAATTTGTTATGGAGGAGGGATGGGTACCCAAAAAACTTGATGTATATGTTGACGTTCCTGATATCATTGATATCAGTCACATGCGTAGCAAAGGTCATCAACCTGGGGAAGAGCTTCTACCAGATGGGGTACCCGTCGAGGATGATTCAGAAATACCTTTAGCCAATGAAGACATTGTTTCACAGCTGGTTTCTATGGGCTTTAACCAGATTCACTGTCAAAAAGCTGCTATAAATACATCAAATGCTGGAGTAGAAGAGGCAATGACTTGGTTACTAGCTCACATGGAGGATCCAGATATTGATGCTCCCATTTCGAGAGGGCGTGGCTCTGAAAGTGTTGACCAGTCGAAAGTTGATATGCTACTTTCATTTGGATTTCAAGATGACGTTGCTCGAAAGGCACTGATAGCATCGGGTGGTGACATTGAGAAAGCAACAGACTGGATCTTCAGCAATCCCGATGCATCCGTTTCCAACATGGATGCTACTGCATCAAACACTACATCTGGTCCAAATGATGCTGATTTATCCGATGGAGGAGGAAGATATCGACTTATGGGAATTGTTAGCCACATTGGAACCTCAACACACTGCGGTCACTATGTTGCACACATCTTGAAAGATGGTAGATGGGTTATTTTTAACGACAACAAGGTAGGGGCTTCCATTAATCCTCCCAAGGACATGGGCTATCTTTACTTTTTCGAGAGGCTTTGA

Protein sequence

>Msa0216970

MDLLRSNLSRVRIPEPTNRVYKQECCLSFDTPMSEGGLFIDMFNFLAFGKDYVGWNFEKTGNPVYLHVKKTKKPVPEDRPLKKPTLLAIGIDGGFDNNEADYEETHNIVILPDYVSLSYPSVELPEKVRLAADAILLDAGAERKEQVAAWTADKKLQIDNGVVIPPTGWKCSQCDKTDNLWLNLTDGVILCGRKNWDGSGGNNHAVEHYKKTGYPLAVKLGTITADLEAADVFSYPEDDNVLDPLLAQHLAFFGIDFSSLQKTEMTTAEKELDQNTNFEWNRIQESGQEVEPIFGPGYTGLVNLGNSCYLAATMQAVFSARSFSSRYYINQSLKKAFEEAPADPTVDLNMQLTKLAHGLLSGKYSVPQVENDDNKNVASTPKSAEQEGIPPRMFKTLVAASHPEFSTMRQQRANAGKTELDPARSFKFGVEDRILCSSGKVAYNRRNDYILSLNIPLHEATNKEELELFHKMKAKKLSEGKEVSGDEVVRPRVPLEACLASFSAPEEIHDFYSTALQTKTTAVKSAGLTSFPDYLVLHMRKFVMEEGWVPKKLDVYVDVPDIIDISHMRSKGHQPGEELLPDGVPVEDDSEIPLANEDIVSQLVSMGFNQIHCQKAAINTSNAGVEEAMTWLLAHMEDPDIDAPISRGRGSESVDQSKVDMLLSFGFQDDVARKALIASGGDIEKATDWIFSNPDASVSNMDATASNTTSGPNDADLSDGGGRYRLMGIVSHIGTSTHCGHYVAHILKDGRWVIFNDNKVGASINPPKDMGYLYFFERL*