Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0217280 | XP_003596568.1 | 99.136 | 579 | 5 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1195 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0217280 | sp|Q69VG1|CIGR1_ORYSJ | 57.966 | 590 | 218 | 11 | 1 | 579 | 1 | 571 | 0.0 | 643 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0217280 | G7ITP3 | 99.136 | 579 | 5 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1195 |
Gene ID | Type | Classification |
---|---|---|
Msa0217280 | TF | GRAS |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0217280 | Msa0296470 | 0.848621 | 5.454724e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0217280 | MtrunA17_Chr2g0319091 | 99.136 | 579 | 5 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1195 |
Msa0217280 | MtrunA17_Chr5g0447691 | 64.083 | 387 | 136 | 1 | 195 | 578 | 157 | 543 | 0.0 | 530 |
Msa0217280 | MtrunA17_Chr3g0101141 | 58.871 | 372 | 153 | 0 | 207 | 578 | 170 | 541 | 3.29e-169 | 491 |
Msa0217280 | MtrunA17_Chr5g0445331 | 49.505 | 505 | 209 | 6 | 79 | 578 | 68 | 531 | 3.16e-166 | 483 |
Msa0217280 | MtrunA17_Chr4g0076091 | 48.723 | 470 | 188 | 3 | 117 | 578 | 118 | 542 | 4.50e-158 | 463 |
Msa0217280 | MtrunA17_Chr1g0159461 | 53.316 | 377 | 175 | 1 | 202 | 578 | 216 | 591 | 4.56e-147 | 436 |
Msa0217280 | MtrunA17_Chr2g0290241 | 53.175 | 378 | 170 | 2 | 205 | 578 | 50 | 424 | 2.43e-143 | 421 |
Msa0217280 | MtrunA17_Chr3g0125811 | 53.243 | 370 | 173 | 0 | 210 | 579 | 201 | 570 | 3.25e-143 | 426 |
Msa0217280 | MtrunA17_Chr7g0224271 | 34.791 | 503 | 273 | 9 | 113 | 578 | 188 | 672 | 2.39e-80 | 266 |
Msa0217280 | MtrunA17_Chr4g0031711 | 33.511 | 376 | 245 | 3 | 208 | 578 | 357 | 732 | 3.65e-69 | 237 |
Msa0217280 | MtrunA17_Chr4g0031721 | 32.527 | 372 | 250 | 1 | 208 | 578 | 312 | 683 | 2.14e-67 | 231 |
Msa0217280 | MtrunA17_Chr2g0328391 | 33.511 | 376 | 243 | 4 | 208 | 578 | 295 | 668 | 3.64e-67 | 230 |
Msa0217280 | MtrunA17_Chr2g0306641 | 36.667 | 390 | 224 | 9 | 195 | 578 | 114 | 486 | 6.22e-67 | 226 |
Msa0217280 | MtrunA17_Chr7g0236851 | 36.533 | 375 | 222 | 6 | 210 | 578 | 292 | 656 | 1.36e-66 | 228 |
Msa0217280 | MtrunA17_Chr4g0031731 | 28.780 | 549 | 358 | 8 | 40 | 577 | 98 | 624 | 2.21e-65 | 224 |
Msa0217280 | MtrunA17_Chr4g0031701 | 29.401 | 551 | 352 | 10 | 40 | 577 | 98 | 624 | 2.52e-65 | 224 |
Msa0217280 | MtrunA17_Chr3g0110971 | 32.594 | 451 | 250 | 11 | 148 | 578 | 170 | 586 | 1.20e-63 | 219 |
Msa0217280 | MtrunA17_Chr6g0468561 | 36.623 | 385 | 214 | 10 | 210 | 579 | 293 | 662 | 2.74e-63 | 220 |
Msa0217280 | MtrunA17_Chr8g0357601 | 35.401 | 387 | 223 | 7 | 208 | 579 | 178 | 552 | 4.50e-63 | 217 |
Msa0217280 | MtrunA17_Chr8g0376381 | 36.170 | 376 | 206 | 12 | 213 | 578 | 170 | 521 | 6.45e-63 | 216 |
Msa0217280 | MtrunA17_Chr4g0057891 | 31.854 | 383 | 239 | 5 | 209 | 578 | 146 | 519 | 7.86e-62 | 213 |
Msa0217280 | MtrunA17_Chr7g0238891 | 31.720 | 372 | 253 | 1 | 208 | 578 | 368 | 739 | 1.35e-60 | 214 |
Msa0217280 | MtrunA17_Chr7g0245601 | 35.422 | 367 | 216 | 7 | 216 | 578 | 442 | 791 | 1.07e-59 | 212 |
Msa0217280 | MtrunA17_Chr4g0031741 | 32.440 | 373 | 247 | 4 | 208 | 578 | 280 | 649 | 1.88e-59 | 209 |
Msa0217280 | MtrunA17_Chr2g0328381 | 32.095 | 377 | 243 | 4 | 208 | 578 | 271 | 640 | 1.16e-58 | 207 |
Msa0217280 | MtrunA17_Chr2g0328341 | 31.016 | 374 | 251 | 3 | 208 | 578 | 268 | 637 | 3.58e-57 | 202 |
Msa0217280 | MtrunA17_Chr2g0328431 | 32.048 | 415 | 269 | 7 | 166 | 578 | 250 | 653 | 4.94e-56 | 200 |
Msa0217280 | MtrunA17_Chr3g0085681 | 30.935 | 417 | 230 | 7 | 213 | 578 | 26 | 435 | 5.11e-56 | 195 |
Msa0217280 | MtrunA17_Chr4g0038851 | 31.395 | 430 | 229 | 8 | 209 | 578 | 45 | 468 | 1.01e-55 | 195 |
Msa0217280 | MtrunA17_Chr2g0328411 | 31.948 | 385 | 258 | 3 | 195 | 578 | 272 | 653 | 1.71e-55 | 199 |
Msa0217280 | MtrunA17_Chr4g0039661 | 37.607 | 351 | 194 | 11 | 238 | 578 | 219 | 554 | 3.00e-53 | 190 |
Msa0217280 | MtrunA17_Chr5g0401131 | 31.937 | 382 | 239 | 8 | 212 | 578 | 114 | 489 | 1.55e-51 | 184 |
Msa0217280 | MtrunA17_Chr4g0038761 | 34.771 | 371 | 219 | 10 | 216 | 579 | 88 | 442 | 2.26e-51 | 182 |
Msa0217280 | MtrunA17_Chr4g0057291 | 31.959 | 388 | 233 | 11 | 208 | 578 | 288 | 661 | 1.16e-50 | 185 |
Msa0217280 | MtrunA17_Chr1g0183641 | 32.546 | 381 | 224 | 12 | 208 | 578 | 119 | 476 | 6.92e-48 | 174 |
Msa0217280 | MtrunA17_Chr2g0328401 | 30.250 | 400 | 270 | 5 | 163 | 561 | 245 | 636 | 1.34e-47 | 176 |
Msa0217280 | MtrunA17_Chr3g0085361 | 32.448 | 339 | 173 | 6 | 289 | 578 | 18 | 349 | 6.74e-47 | 168 |
Msa0217280 | MtrunA17_Chr2g0328361 | 30.053 | 376 | 227 | 8 | 208 | 578 | 270 | 614 | 2.87e-46 | 172 |
Msa0217280 | MtrunA17_Chr1g0200401 | 29.247 | 465 | 255 | 17 | 162 | 579 | 22 | 459 | 2.39e-42 | 158 |
Msa0217280 | MtrunA17_Chr3g0114841 | 31.566 | 396 | 232 | 12 | 209 | 578 | 117 | 499 | 2.41e-41 | 156 |
Msa0217280 | MtrunA17_Chr2g0329591 | 29.124 | 388 | 245 | 8 | 211 | 578 | 73 | 450 | 1.02e-40 | 153 |
Msa0217280 | MtrunA17_Chr5g0424131 | 30.928 | 388 | 243 | 11 | 209 | 578 | 118 | 498 | 3.48e-40 | 153 |
Msa0217280 | MtrunA17_Chr2g0328371 | 33.333 | 240 | 155 | 2 | 293 | 531 | 12 | 247 | 1.41e-38 | 142 |
Msa0217280 | MtrunA17_Chr5g0401421 | 25.761 | 427 | 247 | 11 | 209 | 578 | 32 | 445 | 1.54e-34 | 135 |
Msa0217280 | MtrunA17_Chr2g0294461 | 25.831 | 391 | 256 | 10 | 209 | 578 | 207 | 584 | 5.88e-32 | 130 |
Msa0217280 | MtrunA17_Chr4g0053901 | 24.411 | 467 | 298 | 9 | 166 | 578 | 2 | 467 | 1.45e-31 | 127 |
Msa0217280 | MtrunA17_Chr5g0396491 | 34.762 | 210 | 130 | 2 | 209 | 417 | 53 | 256 | 9.15e-31 | 125 |
Msa0217280 | MtrunA17_Chr5g0396491 | 42.282 | 149 | 85 | 1 | 431 | 578 | 329 | 477 | 9.91e-30 | 122 |
Msa0217280 | MtrunA17_Chr8g0383981 | 27.604 | 384 | 240 | 15 | 209 | 578 | 136 | 495 | 1.14e-27 | 117 |
Msa0217280 | MtrunA17_Chr2g0294471 | 25.131 | 382 | 267 | 9 | 209 | 578 | 201 | 575 | 1.90e-27 | 116 |
Msa0217280 | MtrunA17_Chr7g0270031 | 24.545 | 440 | 289 | 13 | 151 | 578 | 145 | 553 | 6.36e-27 | 115 |
Msa0217280 | MtrunA17_Chr7g0230771 | 26.042 | 384 | 268 | 8 | 197 | 578 | 361 | 730 | 1.71e-26 | 114 |
Msa0217280 | MtrunA17_Chr4g0012071 | 25.000 | 352 | 220 | 10 | 243 | 578 | 227 | 550 | 2.25e-25 | 110 |
Msa0217280 | MtrunA17_Chr7g0230731 | 25.260 | 384 | 271 | 7 | 197 | 578 | 358 | 727 | 2.64e-25 | 110 |
Msa0217280 | MtrunA17_Chr1g0194621 | 25.424 | 354 | 231 | 12 | 243 | 578 | 179 | 517 | 4.78e-24 | 105 |
Msa0217280 | MtrunA17_Chr2g0323111 | 25.862 | 174 | 127 | 2 | 406 | 578 | 133 | 305 | 5.30e-16 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0217280 | AT1G50600.3 | 63.061 | 379 | 140 | 0 | 200 | 578 | 147 | 525 | 5.34e-177 | 511 |
Msa0217280 | AT1G50600.1 | 63.061 | 379 | 140 | 0 | 200 | 578 | 218 | 596 | 2.06e-176 | 512 |
Msa0217280 | AT1G50600.2 | 63.061 | 379 | 140 | 0 | 200 | 578 | 222 | 600 | 2.95e-176 | 512 |
Msa0217280 | AT5G48150.1 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 9.71e-172 | 496 |
Msa0217280 | AT5G48150.4 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 9.71e-172 | 496 |
Msa0217280 | AT5G48150.2 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 9.71e-172 | 496 |
Msa0217280 | AT5G48150.3 | 62.205 | 381 | 143 | 1 | 199 | 578 | 109 | 489 | 9.71e-172 | 496 |
Msa0217280 | AT2G04890.1 | 60.317 | 378 | 143 | 1 | 201 | 578 | 42 | 412 | 3.46e-165 | 476 |
Msa0217280 | AT4G17230.1 | 54.278 | 374 | 171 | 0 | 205 | 578 | 151 | 524 | 6.22e-145 | 429 |
Msa0217280 | AT4G17230.2 | 54.278 | 374 | 171 | 0 | 205 | 578 | 151 | 524 | 6.22e-145 | 429 |
Msa0217280 | AT1G21450.1 | 46.039 | 467 | 227 | 7 | 114 | 579 | 151 | 593 | 3.81e-137 | 411 |
Msa0217280 | AT1G07530.1 | 33.600 | 375 | 247 | 2 | 206 | 578 | 390 | 764 | 7.81e-70 | 240 |
Msa0217280 | AT5G52510.1 | 35.844 | 385 | 222 | 6 | 210 | 579 | 266 | 640 | 3.01e-67 | 230 |
Msa0217280 | AT3G03450.1 | 35.294 | 374 | 229 | 7 | 209 | 578 | 180 | 544 | 3.34e-66 | 225 |
Msa0217280 | AT2G29060.2 | 33.867 | 375 | 244 | 3 | 208 | 578 | 280 | 654 | 1.57e-65 | 226 |
Msa0217280 | AT2G29060.1 | 33.867 | 375 | 244 | 3 | 208 | 578 | 317 | 691 | 2.48e-65 | 226 |
Msa0217280 | AT1G66350.1 | 34.933 | 375 | 218 | 9 | 209 | 578 | 152 | 505 | 5.21e-65 | 221 |
Msa0217280 | AT5G17490.1 | 34.225 | 374 | 227 | 8 | 209 | 578 | 157 | 515 | 1.38e-63 | 218 |
Msa0217280 | AT3G46600.2 | 34.140 | 372 | 241 | 4 | 209 | 578 | 1 | 370 | 9.28e-62 | 209 |
Msa0217280 | AT3G46600.1 | 34.316 | 373 | 241 | 4 | 208 | 578 | 208 | 578 | 1.87e-61 | 213 |
Msa0217280 | AT3G46600.3 | 34.316 | 373 | 241 | 4 | 208 | 578 | 176 | 546 | 2.11e-61 | 213 |
Msa0217280 | AT1G14920.1 | 35.544 | 377 | 219 | 10 | 209 | 578 | 169 | 528 | 7.08e-61 | 211 |
Msa0217280 | AT5G59450.1 | 32.626 | 377 | 246 | 4 | 208 | 578 | 223 | 597 | 1.33e-60 | 212 |
Msa0217280 | AT1G50420.1 | 31.944 | 432 | 225 | 6 | 209 | 578 | 54 | 478 | 1.60e-60 | 208 |
Msa0217280 | AT3G54220.1 | 34.383 | 413 | 250 | 9 | 172 | 578 | 252 | 649 | 2.85e-59 | 209 |
Msa0217280 | AT2G01570.1 | 34.127 | 378 | 223 | 9 | 209 | 578 | 221 | 580 | 9.73e-59 | 206 |
Msa0217280 | AT2G37650.2 | 31.720 | 372 | 251 | 2 | 208 | 578 | 331 | 700 | 5.99e-58 | 206 |
Msa0217280 | AT2G37650.1 | 31.720 | 372 | 251 | 2 | 208 | 578 | 343 | 712 | 6.20e-58 | 206 |
Msa0217280 | AT1G07520.2 | 31.316 | 380 | 251 | 6 | 208 | 578 | 150 | 528 | 1.53e-56 | 199 |
Msa0217280 | AT1G07520.4 | 31.316 | 380 | 251 | 6 | 208 | 578 | 150 | 528 | 1.53e-56 | 199 |
Msa0217280 | AT1G07520.1 | 31.316 | 380 | 251 | 6 | 208 | 578 | 314 | 692 | 4.49e-56 | 201 |
Msa0217280 | AT1G07520.3 | 30.871 | 379 | 254 | 4 | 208 | 578 | 315 | 693 | 4.88e-56 | 201 |
Msa0217280 | AT5G66770.1 | 34.908 | 381 | 225 | 10 | 209 | 579 | 217 | 584 | 1.50e-53 | 192 |
Msa0217280 | AT2G29065.1 | 31.234 | 381 | 251 | 6 | 208 | 578 | 248 | 627 | 9.77e-53 | 191 |
Msa0217280 | AT3G50650.1 | 34.726 | 383 | 225 | 10 | 208 | 578 | 172 | 541 | 2.18e-51 | 185 |
Msa0217280 | AT1G55580.1 | 34.304 | 309 | 179 | 6 | 285 | 578 | 145 | 444 | 1.74e-49 | 177 |
Msa0217280 | AT5G41920.1 | 31.738 | 397 | 245 | 8 | 191 | 578 | 20 | 399 | 1.66e-47 | 171 |
Msa0217280 | AT4G37650.1 | 30.102 | 392 | 240 | 10 | 212 | 578 | 146 | 528 | 2.41e-47 | 174 |
Msa0217280 | AT1G63100.1 | 31.877 | 389 | 239 | 8 | 208 | 578 | 248 | 628 | 1.10e-46 | 174 |
Msa0217280 | AT1G63100.2 | 31.877 | 389 | 239 | 8 | 208 | 578 | 273 | 653 | 1.16e-46 | 174 |
Msa0217280 | AT4G08250.1 | 28.460 | 383 | 251 | 10 | 209 | 578 | 104 | 476 | 1.02e-33 | 134 |
Msa0217280 | AT3G49950.1 | 24.289 | 387 | 270 | 9 | 209 | 578 | 27 | 407 | 7.10e-31 | 125 |
Msa0217280 | AT2G45160.1 | 26.171 | 363 | 218 | 12 | 237 | 578 | 305 | 638 | 9.42e-24 | 106 |
Msa0217280 | AT3G60630.1 | 27.723 | 303 | 188 | 8 | 291 | 578 | 335 | 621 | 6.73e-23 | 103 |
Msa0217280 | AT3G13840.1 | 24.945 | 457 | 303 | 15 | 135 | 578 | 80 | 509 | 1.23e-20 | 95.9 |
Msa0217280 | AT5G67411.1 | 34.821 | 112 | 71 | 2 | 405 | 516 | 89 | 198 | 1.85e-11 | 64.3 |
Find 153 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTGTCCCTACTTAAAATT+TGG | 0.130718 | 2_1:-64064978 | Msa0217280:CDS |
AAAGATGGGGCAATGCTCTT+AGG | 0.253125 | 2_1:-64064177 | Msa0217280:CDS |
CTTCAGGCTCTCTGCACTTA+AGG | 0.286477 | 2_1:+64065039 | None:intergenic |
CCAGAGGCTCGGTGCTTATA+TGG | 0.308533 | 2_1:-64065114 | Msa0217280:CDS |
TGAGAGGAAAACGGTGAATC+AGG | 0.311215 | 2_1:+64065731 | None:intergenic |
AGAATGATCTTTGCGTATAA+TGG | 0.338653 | 2_1:+64065600 | None:intergenic |
TACCACATCTAATTCTTCAT+TGG | 0.339637 | 2_1:-64065444 | Msa0217280:CDS |
TCCACAAGGGTAACCACTTT+AGG | 0.342806 | 2_1:+64064528 | None:intergenic |
GGCATCCCGGTTGAGTTTCA+TGG | 0.352118 | 2_1:-64064714 | Msa0217280:CDS |
GTGAGTAATTCTTCACCTTC+AGG | 0.364548 | 2_1:+64065023 | None:intergenic |
GCTTTGATGTCTAAGAAATT+CGG | 0.375367 | 2_1:-64064735 | Msa0217280:CDS |
CCATATAAGCACCGAGCCTC+TGG | 0.385440 | 2_1:+64065114 | None:intergenic |
GGATCCTTGAAGGTTGGCTT+TGG | 0.390820 | 2_1:-64065761 | Msa0217280:CDS |
TAATGTGGAGCAGCATTGTT+TGG | 0.392234 | 2_1:-64064385 | Msa0217280:CDS |
TTCTAGCCGTTTCTATCAAT+CGG | 0.394967 | 2_1:+64065165 | None:intergenic |
TGCTTCGGCAATGGCTCCAT+TGG | 0.397586 | 2_1:+64064944 | None:intergenic |
CTACTTAAAATTTGGTTACA+TGG | 0.400326 | 2_1:-64064970 | Msa0217280:CDS |
AGCATGTCTCTTGTCACATC+TGG | 0.401716 | 2_1:+64064675 | None:intergenic |
ACACAACACCTTTCTTCAAC+AGG | 0.402167 | 2_1:-64064488 | Msa0217280:CDS |
ACCACATCTAATTCTTCATT+GGG | 0.403891 | 2_1:-64065443 | Msa0217280:CDS |
TTCAGGCTCTCTGCACTTAA+GGG | 0.407636 | 2_1:+64065040 | None:intergenic |
AGAAATGCCGTGTCTATAAA+CGG | 0.414464 | 2_1:-64065146 | Msa0217280:CDS |
ATCCTCATTCCTGCATGCTT+CGG | 0.417086 | 2_1:+64064929 | None:intergenic |
GTTGCAAGGACGGAAGCATC+AGG | 0.425786 | 2_1:-64065080 | Msa0217280:CDS |
GAAATGCCGTGTCTATAAAC+GGG | 0.430156 | 2_1:-64065145 | Msa0217280:CDS |
TATCAGACACGGAGAAGCTT+TGG | 0.432770 | 2_1:-64064649 | Msa0217280:CDS |
TCCTAAAGTGGTTACCCTTG+TGG | 0.433600 | 2_1:-64064529 | Msa0217280:CDS |
GAAAATCCGACACGCCTTGT+TGG | 0.433986 | 2_1:-64065507 | Msa0217280:CDS |
ATTTGATTGCCTGCTACTGC+TGG | 0.442739 | 2_1:+64065322 | None:intergenic |
CTCCTTGCTATTTCTTGAGA+GGG | 0.443191 | 2_1:+64064413 | None:intergenic |
GTCACATCTGGACCGAAAAC+AGG | 0.445280 | 2_1:+64064687 | None:intergenic |
GTTTCCAAAGCCAACCTTCA+AGG | 0.447950 | 2_1:+64065757 | None:intergenic |
GGTATCCCATGAAACTCAAC+CGG | 0.448710 | 2_1:+64064708 | None:intergenic |
TTGCTTGGATCCTTGAAGGT+TGG | 0.448719 | 2_1:-64065767 | Msa0217280:CDS |
AGCAAACCATTTGGCAGTGA+TGG | 0.458184 | 2_1:+64065785 | None:intergenic |
TCAAGTGATGAGTTATAAGA+AGG | 0.460794 | 2_1:+64065629 | None:intergenic |
GTGGTAACTTCGTTATCATC+GGG | 0.461161 | 2_1:+64065461 | None:intergenic |
TCACTGCCAAATGGTTTGCT+TGG | 0.464474 | 2_1:-64065782 | Msa0217280:CDS |
AAGGATCCAAGCAAACCATT+TGG | 0.466262 | 2_1:+64065776 | None:intergenic |
AAGATGGGGCAATGCTCTTA+GGG | 0.467770 | 2_1:-64064176 | Msa0217280:CDS |
CGCACGTGGGGTGCCCCACC+AGG | 0.468298 | 2_1:+64064831 | None:intergenic |
CTCGGTGCTTATATGGTAGA+AGG | 0.468460 | 2_1:-64065107 | Msa0217280:CDS |
TGGTTTGCTTGGATCCTTGA+AGG | 0.471736 | 2_1:-64065771 | Msa0217280:CDS |
TGTAGAGAAACGGCGGAAGT+TGG | 0.473337 | 2_1:-64065288 | Msa0217280:CDS |
AAGTCTAGGTTGACAATGGC+TGG | 0.474170 | 2_1:-64064288 | Msa0217280:CDS |
TTACTCCATGATCTATATCT+CGG | 0.479005 | 2_1:+64065392 | None:intergenic |
TCTATGAACCTGTTGAAGAA+AGG | 0.480955 | 2_1:+64064480 | None:intergenic |
CAAGCTCTTGCCGCAAGACC+TGG | 0.482569 | 2_1:-64064849 | Msa0217280:CDS |
GCACCCCACGTGCGGATCAC+AGG | 0.488784 | 2_1:-64064822 | Msa0217280:CDS |
GTCGAGCGACACGAACTACT+TGG | 0.488828 | 2_1:-64064318 | Msa0217280:CDS |
TATACACTAGTTGAGAAAGA+TGG | 0.493554 | 2_1:-64064192 | Msa0217280:CDS |
CTCAAAATATGCCCGTGGCA+AGG | 0.495295 | 2_1:-64064784 | Msa0217280:CDS |
TCAAAATATGCCCGTGGCAA+GGG | 0.497303 | 2_1:-64064783 | Msa0217280:CDS |
TTTGAATATATTGTGACCCT+TGG | 0.497550 | 2_1:+64065363 | None:intergenic |
AGTTACAGTATGAGTAATGC+AGG | 0.503062 | 2_1:-64065830 | Msa0217280:CDS |
GAAGTCTCTTTCTCCTAAAG+TGG | 0.503964 | 2_1:-64064541 | Msa0217280:CDS |
GCATCCCGGTTGAGTTTCAT+GGG | 0.506071 | 2_1:-64064713 | Msa0217280:CDS |
TACTCCATGATCTATATCTC+GGG | 0.506632 | 2_1:+64065393 | None:intergenic |
TGTCATTGCATGCGAAGGTA+AGG | 0.508199 | 2_1:-64064346 | Msa0217280:CDS |
GGAGCAGCATTGTTTGGCTC+GGG | 0.508648 | 2_1:-64064379 | Msa0217280:CDS |
TGGAGCAGCATTGTTTGGCT+CGG | 0.508972 | 2_1:-64064380 | Msa0217280:CDS |
CGCATGTTACCAGCAGTAGC+AGG | 0.509183 | 2_1:-64065331 | Msa0217280:CDS |
ATACACTAGTTGAGAAAGAT+GGG | 0.509202 | 2_1:-64064191 | Msa0217280:CDS |
GTCTAAGAAATTCGGCATCC+CGG | 0.511547 | 2_1:-64064727 | Msa0217280:CDS |
ATTCCTGCATGCTTCGGCAA+TGG | 0.514666 | 2_1:+64064935 | None:intergenic |
GATGGAAAAGATGACATGTA+AGG | 0.515221 | 2_1:+64065803 | None:intergenic |
TCTCCTTGCTATTTCTTGAG+AGG | 0.515388 | 2_1:+64064412 | None:intergenic |
TGATCTTTGCGTATAATGGT+TGG | 0.518085 | 2_1:+64065604 | None:intergenic |
ATCTCTACAAGGGTTTCCAT+CGG | 0.519926 | 2_1:-64065255 | Msa0217280:CDS |
TGTGGTAACTTCGTTATCAT+CGG | 0.521741 | 2_1:+64065460 | None:intergenic |
TGTTTGATTCTTGCTCCACA+AGG | 0.522993 | 2_1:+64064514 | None:intergenic |
AACTCAGGAGAAATTCTCTC+TGG | 0.530415 | 2_1:-64065659 | Msa0217280:CDS |
TCTCTACAAGGGTTTCCATC+GGG | 0.532312 | 2_1:-64065254 | Msa0217280:CDS |
GCTCTTGCCGCAAGACCTGG+TGG | 0.533032 | 2_1:-64064846 | Msa0217280:CDS |
GGCAAGGGACTCGAAGTAGT+TGG | 0.533885 | 2_1:-64064768 | Msa0217280:CDS |
CCGGCCCGAGATATAGATCA+TGG | 0.535271 | 2_1:-64065397 | Msa0217280:CDS |
TCTTGCCGCAAGACCTGGTG+GGG | 0.535298 | 2_1:-64064844 | Msa0217280:CDS |
AGCATCAAGGAAACAGCATC+CGG | 0.536179 | 2_1:-64065416 | Msa0217280:CDS |
ATTTGATATCTGCTTCAGCT+TGG | 0.537926 | 2_1:-64064140 | Msa0217280:CDS |
CGATTCCTGTGATCCGCACG+TGG | 0.541378 | 2_1:+64064817 | None:intergenic |
TTTGGTTACATGGCTGCCAA+TGG | 0.544829 | 2_1:-64064960 | Msa0217280:CDS |
CTCCTGAGTTGTGTTGCTCG+TGG | 0.546744 | 2_1:+64065672 | None:intergenic |
AGAAGGTCTTGTTGCAAGGA+CGG | 0.548822 | 2_1:-64065090 | Msa0217280:CDS |
AGATTGCTCAAGGAACTCAA+TGG | 0.549437 | 2_1:-64064884 | Msa0217280:CDS |
ATAGACTTTCAGATTGCTCA+AGG | 0.550384 | 2_1:-64064894 | Msa0217280:CDS |
CCATGATCTATATCTCGGGC+CGG | 0.550538 | 2_1:+64065397 | None:intergenic |
AATCTCAAAAGTCCATCCCT+TGG | 0.551200 | 2_1:+64064567 | None:intergenic |
GAGAGGAAAACGGTGAATCA+GGG | 0.553220 | 2_1:+64065732 | None:intergenic |
ACTCTTTCTGCATTTAGTGA+CGG | 0.553761 | 2_1:-64065695 | Msa0217280:CDS |
TAAGCACCGAGCCTCTGGAT+TGG | 0.553967 | 2_1:+64065119 | None:intergenic |
GAGCCATTGCCGAAGCATGC+AGG | 0.556222 | 2_1:-64064938 | Msa0217280:CDS |
AGAAACTTTAGATTACTACT+TGG | 0.559206 | 2_1:-64064460 | Msa0217280:CDS |
CAGACACGGAGAAGCTTTGG+CGG | 0.563257 | 2_1:-64064646 | Msa0217280:CDS |
GGGTGCCCCACCAGGTCTTG+CGG | 0.563707 | 2_1:+64064839 | None:intergenic |
CTCTTGCCGCAAGACCTGGT+GGG | 0.564705 | 2_1:-64064845 | Msa0217280:CDS |
AAGCTGTGCATGTAGAGAAA+CGG | 0.566125 | 2_1:-64065298 | Msa0217280:CDS |
GAATCAAAATGAGAGGAAAA+CGG | 0.567251 | 2_1:+64065722 | None:intergenic |
TTCATTGGGTGAGAGCATCA+AGG | 0.568298 | 2_1:-64065429 | Msa0217280:CDS |
GAAGAGGATTCATCTCTACA+AGG | 0.568777 | 2_1:-64065266 | Msa0217280:CDS |
TACTTGGTAAGTGGAAGTCT+AGG | 0.570428 | 2_1:-64064302 | Msa0217280:CDS |
CAAGTGATGAGTTATAAGAA+GGG | 0.570861 | 2_1:+64065630 | None:intergenic |
TGCCGAAGCATGCAGGAATG+AGG | 0.572488 | 2_1:-64064931 | Msa0217280:CDS |
GGAACTAGAAACTGCTCTGA+TGG | 0.573852 | 2_1:-64065486 | Msa0217280:CDS |
GTCAATGTCATTGCATGCGA+AGG | 0.575792 | 2_1:-64064351 | Msa0217280:CDS |
GAAACGGCGGAAGTTGGAAG+AGG | 0.580531 | 2_1:-64065282 | Msa0217280:CDS |
TACTTCGAGTCCCTTGCCAC+GGG | 0.580965 | 2_1:+64064773 | None:intergenic |
GACACGAACTACTTGGTAAG+TGG | 0.581297 | 2_1:-64064311 | Msa0217280:CDS |
TCTTGAGAGGGTGACATCGA+TGG | 0.582838 | 2_1:+64064425 | None:intergenic |
ACTAAATGCAGAAAGAGTAT+CGG | 0.584728 | 2_1:+64065700 | None:intergenic |
TGGTAGAAGGTCTTGTTGCA+AGG | 0.589192 | 2_1:-64065094 | Msa0217280:CDS |
GGGGAGCCAATCCAGAGGCT+CGG | 0.590752 | 2_1:-64065125 | Msa0217280:CDS |
TGCATGCGAAGGTAAGGAAA+GGG | 0.591346 | 2_1:-64064340 | Msa0217280:CDS |
CTACTTCGAGTCCCTTGCCA+CGG | 0.591823 | 2_1:+64064772 | None:intergenic |
CACCCTCTCAAGAAATAGCA+AGG | 0.600143 | 2_1:-64064415 | Msa0217280:CDS |
TTGCATGCGAAGGTAAGGAA+AGG | 0.601660 | 2_1:-64064341 | Msa0217280:CDS |
CTAGTTCCAACAAGGCGTGT+CGG | 0.604341 | 2_1:+64065501 | None:intergenic |
GTGTTGATGTGAATAATCCA+AGG | 0.605633 | 2_1:-64064584 | Msa0217280:CDS |
GATTGCATGTGCCAAAGCCA+TGG | 0.610029 | 2_1:-64065213 | Msa0217280:CDS |
GGCCACGAGCAACACAACTC+AGG | 0.611900 | 2_1:-64065674 | Msa0217280:CDS |
CTGGTGGGGCACCCCACGTG+CGG | 0.613236 | 2_1:-64064830 | Msa0217280:CDS |
GATTCCTGTGATCCGCACGT+GGG | 0.614125 | 2_1:+64064818 | None:intergenic |
AAGAGGATTCATCTCTACAA+GGG | 0.614893 | 2_1:-64065265 | Msa0217280:CDS |
TGGCTCCCCGTTTATAGACA+CGG | 0.615860 | 2_1:+64065139 | None:intergenic |
ATTCCTGTGATCCGCACGTG+GGG | 0.622362 | 2_1:+64064819 | None:intergenic |
TAGCAAGGAGAGGATTAATG+TGG | 0.632293 | 2_1:-64064400 | Msa0217280:CDS |
GTTTGATTCTTGCTCCACAA+GGG | 0.635439 | 2_1:+64064515 | None:intergenic |
GCTCTGAATAGCATCTCAGA+AGG | 0.636572 | 2_1:+64064217 | None:intergenic |
TTGCAAGGACGGAAGCATCA+GGG | 0.638897 | 2_1:-64065079 | Msa0217280:CDS |
CATGGAGTAATGAGCACCAA+GGG | 0.639156 | 2_1:-64065379 | Msa0217280:CDS |
AGTATCGGAATCAAAATGAG+AGG | 0.640879 | 2_1:+64065715 | None:intergenic |
ATGGGGCAATGCTCTTAGGG+TGG | 0.644351 | 2_1:-64064173 | Msa0217280:CDS |
ACCCAATGAAGAATTAGATG+TGG | 0.646339 | 2_1:+64065442 | None:intergenic |
AGCAGTTTCTAGTTCCAACA+AGG | 0.652329 | 2_1:+64065493 | None:intergenic |
CTTAAGTGCAGAGAGCCTGA+AGG | 0.653965 | 2_1:-64065038 | Msa0217280:CDS |
CTACTGCTGGTAACATGCGA+CGG | 0.655149 | 2_1:+64065335 | None:intergenic |
TGGTAACTTCGTTATCATCG+GGG | 0.655578 | 2_1:+64065462 | None:intergenic |
AGAGGAAAACGGTGAATCAG+GGG | 0.656544 | 2_1:+64065733 | None:intergenic |
GATGTGAATAATCCAAGGGA+TGG | 0.658106 | 2_1:-64064579 | Msa0217280:CDS |
GTGGAAGTCTAGGTTGACAA+TGG | 0.658484 | 2_1:-64064292 | Msa0217280:CDS |
GCTGTGTGATGAAGTTGCAG+TGG | 0.663973 | 2_1:+64064615 | None:intergenic |
GAATTCACATAAGAACTCAA+AGG | 0.664196 | 2_1:+64064252 | None:intergenic |
TCTCAAGAAATAGCAAGGAG+AGG | 0.677996 | 2_1:-64064410 | Msa0217280:CDS |
CTGTGCATGTAGAGAAACGG+CGG | 0.685656 | 2_1:-64065295 | Msa0217280:CDS |
GACATGCTTGATATCAGACA+CGG | 0.687158 | 2_1:-64064660 | Msa0217280:CDS |
CCAGTCTCAAAATATGCCCG+TGG | 0.687941 | 2_1:-64064789 | Msa0217280:CDS |
GGTAACTTCGTTATCATCGG+GGG | 0.691927 | 2_1:+64065463 | None:intergenic |
AATTGCTTCAAATCTCCCGA+TGG | 0.703443 | 2_1:+64065239 | None:intergenic |
TGTTGATGTGAATAATCCAA+GGG | 0.710085 | 2_1:-64064583 | Msa0217280:CDS |
TAAACGGGGAGCCAATCCAG+AGG | 0.715570 | 2_1:-64065130 | Msa0217280:CDS |
TCATGGAGTAATGAGCACCA+AGG | 0.716608 | 2_1:-64065380 | Msa0217280:CDS |
TACACTAGTTGAGAAAGATG+GGG | 0.719725 | 2_1:-64064190 | Msa0217280:CDS |
AAATGCCGTGTCTATAAACG+GGG | 0.726282 | 2_1:-64065144 | Msa0217280:CDS |
GTATCCCATGAAACTCAACC+GGG | 0.730080 | 2_1:+64064709 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGTAACCAAATTTTAAGTA+GGG | + | chr2_1:64065016-64065035 | None:intergenic | 20.0% |
!!! | ATGTAACCAAATTTTAAGTA+GGG | + | chr2_1:64065016-64065035 | None:intergenic | 20.0% |
!!! | CATGTAACCAAATTTTAAGT+AGG | + | chr2_1:64065017-64065036 | None:intergenic | 25.0% |
! | CTACTTAAAATTTGGTTACA+TGG | - | chr2_1:64065015-64065034 | Msa0217280:CDS | 25.0% |
! | AGAAACTTTAGATTACTACT+TGG | - | chr2_1:64065525-64065544 | Msa0217280:CDS | 25.0% |
!!! | CATGTAACCAAATTTTAAGT+AGG | + | chr2_1:64065017-64065036 | None:intergenic | 25.0% |
! | CTACTTAAAATTTGGTTACA+TGG | - | chr2_1:64065015-64065034 | Msa0217280:CDS | 25.0% |
! | AGAAACTTTAGATTACTACT+TGG | - | chr2_1:64065525-64065544 | Msa0217280:CDS | 25.0% |
GAATCAAAATGAGAGGAAAA+CGG | + | chr2_1:64064266-64064285 | None:intergenic | 30.0% | |
! | ACTAAATGCAGAAAGAGTAT+CGG | + | chr2_1:64064288-64064307 | None:intergenic | 30.0% |
CAAGTGATGAGTTATAAGAA+GGG | + | chr2_1:64064358-64064377 | None:intergenic | 30.0% | |
TCAAGTGATGAGTTATAAGA+AGG | + | chr2_1:64064359-64064378 | None:intergenic | 30.0% | |
AGAATGATCTTTGCGTATAA+TGG | + | chr2_1:64064388-64064407 | None:intergenic | 30.0% | |
TACCACATCTAATTCTTCAT+TGG | - | chr2_1:64064541-64064560 | Msa0217280:CDS | 30.0% | |
ACCACATCTAATTCTTCATT+GGG | - | chr2_1:64064542-64064561 | Msa0217280:CDS | 30.0% | |
TTACTCCATGATCTATATCT+CGG | + | chr2_1:64064596-64064615 | None:intergenic | 30.0% | |
TTTGAATATATTGTGACCCT+TGG | + | chr2_1:64064625-64064644 | None:intergenic | 30.0% | |
! | TTTTGACCGATTGATAGAAA+CGG | - | chr2_1:64064814-64064833 | Msa0217280:CDS | 30.0% |
ATCTGTCCCTACTTAAAATT+TGG | - | chr2_1:64065007-64065026 | Msa0217280:CDS | 30.0% | |
GCTTTGATGTCTAAGAAATT+CGG | - | chr2_1:64065250-64065269 | Msa0217280:CDS | 30.0% | |
TGTTGATGTGAATAATCCAA+GGG | - | chr2_1:64065402-64065421 | Msa0217280:CDS | 30.0% | |
GAATTCACATAAGAACTCAA+AGG | + | chr2_1:64065736-64065755 | None:intergenic | 30.0% | |
TATACACTAGTTGAGAAAGA+TGG | - | chr2_1:64065793-64065812 | Msa0217280:CDS | 30.0% | |
ATACACTAGTTGAGAAAGAT+GGG | - | chr2_1:64065794-64065813 | Msa0217280:CDS | 30.0% | |
GAATCAAAATGAGAGGAAAA+CGG | + | chr2_1:64064266-64064285 | None:intergenic | 30.0% | |
! | ACTAAATGCAGAAAGAGTAT+CGG | + | chr2_1:64064288-64064307 | None:intergenic | 30.0% |
CAAGTGATGAGTTATAAGAA+GGG | + | chr2_1:64064358-64064377 | None:intergenic | 30.0% | |
TCAAGTGATGAGTTATAAGA+AGG | + | chr2_1:64064359-64064378 | None:intergenic | 30.0% | |
AGAATGATCTTTGCGTATAA+TGG | + | chr2_1:64064388-64064407 | None:intergenic | 30.0% | |
TACCACATCTAATTCTTCAT+TGG | - | chr2_1:64064541-64064560 | Msa0217280:CDS | 30.0% | |
ACCACATCTAATTCTTCATT+GGG | - | chr2_1:64064542-64064561 | Msa0217280:CDS | 30.0% | |
TTACTCCATGATCTATATCT+CGG | + | chr2_1:64064596-64064615 | None:intergenic | 30.0% | |
TTTGAATATATTGTGACCCT+TGG | + | chr2_1:64064625-64064644 | None:intergenic | 30.0% | |
! | TTTTGACCGATTGATAGAAA+CGG | - | chr2_1:64064814-64064833 | Msa0217280:CDS | 30.0% |
ATCTGTCCCTACTTAAAATT+TGG | - | chr2_1:64065007-64065026 | Msa0217280:CDS | 30.0% | |
GCTTTGATGTCTAAGAAATT+CGG | - | chr2_1:64065250-64065269 | Msa0217280:CDS | 30.0% | |
TGTTGATGTGAATAATCCAA+GGG | - | chr2_1:64065402-64065421 | Msa0217280:CDS | 30.0% | |
GAATTCACATAAGAACTCAA+AGG | + | chr2_1:64065736-64065755 | None:intergenic | 30.0% | |
TATACACTAGTTGAGAAAGA+TGG | - | chr2_1:64065793-64065812 | Msa0217280:CDS | 30.0% | |
ATACACTAGTTGAGAAAGAT+GGG | - | chr2_1:64065794-64065813 | Msa0217280:CDS | 30.0% | |
AGTTACAGTATGAGTAATGC+AGG | - | chr2_1:64064155-64064174 | Msa0217280:CDS | 35.0% | |
GATGGAAAAGATGACATGTA+AGG | + | chr2_1:64064185-64064204 | None:intergenic | 35.0% | |
! | AGTATCGGAATCAAAATGAG+AGG | + | chr2_1:64064273-64064292 | None:intergenic | 35.0% |
ACTCTTTCTGCATTTAGTGA+CGG | - | chr2_1:64064290-64064309 | Msa0217280:CDS | 35.0% | |
TGATCTTTGCGTATAATGGT+TGG | + | chr2_1:64064384-64064403 | None:intergenic | 35.0% | |
TGTGGTAACTTCGTTATCAT+CGG | + | chr2_1:64064528-64064547 | None:intergenic | 35.0% | |
ACCCAATGAAGAATTAGATG+TGG | + | chr2_1:64064546-64064565 | None:intergenic | 35.0% | |
TACTCCATGATCTATATCTC+GGG | + | chr2_1:64064595-64064614 | None:intergenic | 35.0% | |
AAGAGGATTCATCTCTACAA+GGG | - | chr2_1:64064720-64064739 | Msa0217280:CDS | 35.0% | |
!!! | TTCTGTGTTATTTTCAGCCA+TGG | + | chr2_1:64064792-64064811 | None:intergenic | 35.0% |
TTCTAGCCGTTTCTATCAAT+CGG | + | chr2_1:64064823-64064842 | None:intergenic | 35.0% | |
AGAAATGCCGTGTCTATAAA+CGG | - | chr2_1:64064839-64064858 | Msa0217280:CDS | 35.0% | |
ATAGACTTTCAGATTGCTCA+AGG | - | chr2_1:64065091-64065110 | Msa0217280:CDS | 35.0% | |
! | TTTCATGGGATACCTGTTTT+CGG | - | chr2_1:64065286-64065305 | Msa0217280:CDS | 35.0% |
! | GTGTTGATGTGAATAATCCA+AGG | - | chr2_1:64065401-64065420 | Msa0217280:CDS | 35.0% |
TCTATGAACCTGTTGAAGAA+AGG | + | chr2_1:64065508-64065527 | None:intergenic | 35.0% | |
TACACTAGTTGAGAAAGATG+GGG | - | chr2_1:64065795-64065814 | Msa0217280:CDS | 35.0% | |
ATTTGATATCTGCTTCAGCT+TGG | - | chr2_1:64065845-64065864 | Msa0217280:CDS | 35.0% | |
AGTTACAGTATGAGTAATGC+AGG | - | chr2_1:64064155-64064174 | Msa0217280:CDS | 35.0% | |
GATGGAAAAGATGACATGTA+AGG | + | chr2_1:64064185-64064204 | None:intergenic | 35.0% | |
! | AGTATCGGAATCAAAATGAG+AGG | + | chr2_1:64064273-64064292 | None:intergenic | 35.0% |
ACTCTTTCTGCATTTAGTGA+CGG | - | chr2_1:64064290-64064309 | Msa0217280:CDS | 35.0% | |
TGATCTTTGCGTATAATGGT+TGG | + | chr2_1:64064384-64064403 | None:intergenic | 35.0% | |
TGTGGTAACTTCGTTATCAT+CGG | + | chr2_1:64064528-64064547 | None:intergenic | 35.0% | |
ACCCAATGAAGAATTAGATG+TGG | + | chr2_1:64064546-64064565 | None:intergenic | 35.0% | |
TACTCCATGATCTATATCTC+GGG | + | chr2_1:64064595-64064614 | None:intergenic | 35.0% | |
AAGAGGATTCATCTCTACAA+GGG | - | chr2_1:64064720-64064739 | Msa0217280:CDS | 35.0% | |
!!! | TTCTGTGTTATTTTCAGCCA+TGG | + | chr2_1:64064792-64064811 | None:intergenic | 35.0% |
TTCTAGCCGTTTCTATCAAT+CGG | + | chr2_1:64064823-64064842 | None:intergenic | 35.0% | |
AGAAATGCCGTGTCTATAAA+CGG | - | chr2_1:64064839-64064858 | Msa0217280:CDS | 35.0% | |
ATAGACTTTCAGATTGCTCA+AGG | - | chr2_1:64065091-64065110 | Msa0217280:CDS | 35.0% | |
! | TTTCATGGGATACCTGTTTT+CGG | - | chr2_1:64065286-64065305 | Msa0217280:CDS | 35.0% |
! | GTGTTGATGTGAATAATCCA+AGG | - | chr2_1:64065401-64065420 | Msa0217280:CDS | 35.0% |
TCTATGAACCTGTTGAAGAA+AGG | + | chr2_1:64065508-64065527 | None:intergenic | 35.0% | |
TACACTAGTTGAGAAAGATG+GGG | - | chr2_1:64065795-64065814 | Msa0217280:CDS | 35.0% | |
ATTTGATATCTGCTTCAGCT+TGG | - | chr2_1:64065845-64065864 | Msa0217280:CDS | 35.0% | |
! | TCTTTTCCATCACTGCCAAA+TGG | - | chr2_1:64064194-64064213 | Msa0217280:CDS | 40.0% |
AAGGATCCAAGCAAACCATT+TGG | + | chr2_1:64064212-64064231 | None:intergenic | 40.0% | |
AACTCAGGAGAAATTCTCTC+TGG | - | chr2_1:64064326-64064345 | Msa0217280:CDS | 40.0% | |
!!! | TGTCGGATTTTCTGGTTACT+TGG | + | chr2_1:64064470-64064489 | None:intergenic | 40.0% |
!! | AGCAGTTTCTAGTTCCAACA+AGG | + | chr2_1:64064495-64064514 | None:intergenic | 40.0% |
TGGTAACTTCGTTATCATCG+GGG | + | chr2_1:64064526-64064545 | None:intergenic | 40.0% | |
GTGGTAACTTCGTTATCATC+GGG | + | chr2_1:64064527-64064546 | None:intergenic | 40.0% | |
AAGCTGTGCATGTAGAGAAA+CGG | - | chr2_1:64064687-64064706 | Msa0217280:CDS | 40.0% | |
GAAGAGGATTCATCTCTACA+AGG | - | chr2_1:64064719-64064738 | Msa0217280:CDS | 40.0% | |
ATCTCTACAAGGGTTTCCAT+CGG | - | chr2_1:64064730-64064749 | Msa0217280:CDS | 40.0% | |
AATTGCTTCAAATCTCCCGA+TGG | + | chr2_1:64064749-64064768 | None:intergenic | 40.0% | |
!! | GTTATTTTCAGCCATGGCTT+TGG | + | chr2_1:64064786-64064805 | None:intergenic | 40.0% |
GAAATGCCGTGTCTATAAAC+GGG | - | chr2_1:64064840-64064859 | Msa0217280:CDS | 40.0% | |
AAATGCCGTGTCTATAAACG+GGG | - | chr2_1:64064841-64064860 | Msa0217280:CDS | 40.0% | |
GTGAGTAATTCTTCACCTTC+AGG | + | chr2_1:64064965-64064984 | None:intergenic | 40.0% | |
AGATTGCTCAAGGAACTCAA+TGG | - | chr2_1:64065101-64065120 | Msa0217280:CDS | 40.0% | |
GACATGCTTGATATCAGACA+CGG | - | chr2_1:64065325-64065344 | Msa0217280:CDS | 40.0% | |
GATGTGAATAATCCAAGGGA+TGG | - | chr2_1:64065406-64065425 | Msa0217280:CDS | 40.0% | |
AATCTCAAAAGTCCATCCCT+TGG | + | chr2_1:64065421-64065440 | None:intergenic | 40.0% | |
!!! | AAGGGATGGACTTTTGAGAT+TGG | - | chr2_1:64065420-64065439 | Msa0217280:CDS | 40.0% |
GAAGTCTCTTTCTCCTAAAG+TGG | - | chr2_1:64065444-64065463 | Msa0217280:CDS | 40.0% | |
GTTTGATTCTTGCTCCACAA+GGG | + | chr2_1:64065473-64065492 | None:intergenic | 40.0% | |
TGTTTGATTCTTGCTCCACA+AGG | + | chr2_1:64065474-64065493 | None:intergenic | 40.0% | |
ACACAACACCTTTCTTCAAC+AGG | - | chr2_1:64065497-64065516 | Msa0217280:CDS | 40.0% | |
!! | CTCCTTGCTATTTCTTGAGA+GGG | + | chr2_1:64065575-64065594 | None:intergenic | 40.0% |
!! | TCTCCTTGCTATTTCTTGAG+AGG | + | chr2_1:64065576-64065595 | None:intergenic | 40.0% |
TCTCAAGAAATAGCAAGGAG+AGG | - | chr2_1:64065575-64065594 | Msa0217280:CDS | 40.0% | |
TAGCAAGGAGAGGATTAATG+TGG | - | chr2_1:64065585-64065604 | Msa0217280:CDS | 40.0% | |
TAATGTGGAGCAGCATTGTT+TGG | - | chr2_1:64065600-64065619 | Msa0217280:CDS | 40.0% | |
TACTTGGTAAGTGGAAGTCT+AGG | - | chr2_1:64065683-64065702 | Msa0217280:CDS | 40.0% | |
! | TCTTTTCCATCACTGCCAAA+TGG | - | chr2_1:64064194-64064213 | Msa0217280:CDS | 40.0% |
AAGGATCCAAGCAAACCATT+TGG | + | chr2_1:64064212-64064231 | None:intergenic | 40.0% | |
AACTCAGGAGAAATTCTCTC+TGG | - | chr2_1:64064326-64064345 | Msa0217280:CDS | 40.0% | |
!!! | TGTCGGATTTTCTGGTTACT+TGG | + | chr2_1:64064470-64064489 | None:intergenic | 40.0% |
!! | AGCAGTTTCTAGTTCCAACA+AGG | + | chr2_1:64064495-64064514 | None:intergenic | 40.0% |
TGGTAACTTCGTTATCATCG+GGG | + | chr2_1:64064526-64064545 | None:intergenic | 40.0% | |
GTGGTAACTTCGTTATCATC+GGG | + | chr2_1:64064527-64064546 | None:intergenic | 40.0% | |
AAGCTGTGCATGTAGAGAAA+CGG | - | chr2_1:64064687-64064706 | Msa0217280:CDS | 40.0% | |
GAAGAGGATTCATCTCTACA+AGG | - | chr2_1:64064719-64064738 | Msa0217280:CDS | 40.0% | |
ATCTCTACAAGGGTTTCCAT+CGG | - | chr2_1:64064730-64064749 | Msa0217280:CDS | 40.0% | |
AATTGCTTCAAATCTCCCGA+TGG | + | chr2_1:64064749-64064768 | None:intergenic | 40.0% | |
!! | GTTATTTTCAGCCATGGCTT+TGG | + | chr2_1:64064786-64064805 | None:intergenic | 40.0% |
GAAATGCCGTGTCTATAAAC+GGG | - | chr2_1:64064840-64064859 | Msa0217280:CDS | 40.0% | |
AAATGCCGTGTCTATAAACG+GGG | - | chr2_1:64064841-64064860 | Msa0217280:CDS | 40.0% | |
GTGAGTAATTCTTCACCTTC+AGG | + | chr2_1:64064965-64064984 | None:intergenic | 40.0% | |
AGATTGCTCAAGGAACTCAA+TGG | - | chr2_1:64065101-64065120 | Msa0217280:CDS | 40.0% | |
GACATGCTTGATATCAGACA+CGG | - | chr2_1:64065325-64065344 | Msa0217280:CDS | 40.0% | |
GATGTGAATAATCCAAGGGA+TGG | - | chr2_1:64065406-64065425 | Msa0217280:CDS | 40.0% | |
AATCTCAAAAGTCCATCCCT+TGG | + | chr2_1:64065421-64065440 | None:intergenic | 40.0% | |
!!! | AAGGGATGGACTTTTGAGAT+TGG | - | chr2_1:64065420-64065439 | Msa0217280:CDS | 40.0% |
GAAGTCTCTTTCTCCTAAAG+TGG | - | chr2_1:64065444-64065463 | Msa0217280:CDS | 40.0% | |
GTTTGATTCTTGCTCCACAA+GGG | + | chr2_1:64065473-64065492 | None:intergenic | 40.0% | |
TGTTTGATTCTTGCTCCACA+AGG | + | chr2_1:64065474-64065493 | None:intergenic | 40.0% | |
ACACAACACCTTTCTTCAAC+AGG | - | chr2_1:64065497-64065516 | Msa0217280:CDS | 40.0% | |
!! | CTCCTTGCTATTTCTTGAGA+GGG | + | chr2_1:64065575-64065594 | None:intergenic | 40.0% |
!! | TCTCCTTGCTATTTCTTGAG+AGG | + | chr2_1:64065576-64065595 | None:intergenic | 40.0% |
TCTCAAGAAATAGCAAGGAG+AGG | - | chr2_1:64065575-64065594 | Msa0217280:CDS | 40.0% | |
TAGCAAGGAGAGGATTAATG+TGG | - | chr2_1:64065585-64065604 | Msa0217280:CDS | 40.0% | |
TAATGTGGAGCAGCATTGTT+TGG | - | chr2_1:64065600-64065619 | Msa0217280:CDS | 40.0% | |
TACTTGGTAAGTGGAAGTCT+AGG | - | chr2_1:64065683-64065702 | Msa0217280:CDS | 40.0% | |
AGCAAACCATTTGGCAGTGA+TGG | + | chr2_1:64064203-64064222 | None:intergenic | 45.0% | |
!! | TCACTGCCAAATGGTTTGCT+TGG | - | chr2_1:64064203-64064222 | Msa0217280:CDS | 45.0% |
!! | TGGTTTGCTTGGATCCTTGA+AGG | - | chr2_1:64064214-64064233 | Msa0217280:CDS | 45.0% |
TTGCTTGGATCCTTGAAGGT+TGG | - | chr2_1:64064218-64064237 | Msa0217280:CDS | 45.0% | |
GTTTCCAAAGCCAACCTTCA+AGG | + | chr2_1:64064231-64064250 | None:intergenic | 45.0% | |
AGAGGAAAACGGTGAATCAG+GGG | + | chr2_1:64064255-64064274 | None:intergenic | 45.0% | |
GAGAGGAAAACGGTGAATCA+GGG | + | chr2_1:64064256-64064275 | None:intergenic | 45.0% | |
TGAGAGGAAAACGGTGAATC+AGG | + | chr2_1:64064257-64064276 | None:intergenic | 45.0% | |
GGAACTAGAAACTGCTCTGA+TGG | - | chr2_1:64064499-64064518 | Msa0217280:CDS | 45.0% | |
GGTAACTTCGTTATCATCGG+GGG | + | chr2_1:64064525-64064544 | None:intergenic | 45.0% | |
!! | TTCATTGGGTGAGAGCATCA+AGG | - | chr2_1:64064556-64064575 | Msa0217280:CDS | 45.0% |
AGCATCAAGGAAACAGCATC+CGG | - | chr2_1:64064569-64064588 | Msa0217280:CDS | 45.0% | |
TCATGGAGTAATGAGCACCA+AGG | - | chr2_1:64064605-64064624 | Msa0217280:CDS | 45.0% | |
CATGGAGTAATGAGCACCAA+GGG | - | chr2_1:64064606-64064625 | Msa0217280:CDS | 45.0% | |
ATTTGATTGCCTGCTACTGC+TGG | + | chr2_1:64064666-64064685 | None:intergenic | 45.0% | |
TCTCTACAAGGGTTTCCATC+GGG | - | chr2_1:64064731-64064750 | Msa0217280:CDS | 45.0% | |
!! | CTCGGTGCTTATATGGTAGA+AGG | - | chr2_1:64064878-64064897 | Msa0217280:CDS | 45.0% |
!! | TGGTAGAAGGTCTTGTTGCA+AGG | - | chr2_1:64064891-64064910 | Msa0217280:CDS | 45.0% |
!! | AGAAGGTCTTGTTGCAAGGA+CGG | - | chr2_1:64064895-64064914 | Msa0217280:CDS | 45.0% |
TTCAGGCTCTCTGCACTTAA+GGG | + | chr2_1:64064948-64064967 | None:intergenic | 45.0% | |
TTTGGTTACATGGCTGCCAA+TGG | - | chr2_1:64065025-64065044 | Msa0217280:CDS | 45.0% | |
ATCCTCATTCCTGCATGCTT+CGG | + | chr2_1:64065059-64065078 | None:intergenic | 45.0% | |
TCAAAATATGCCCGTGGCAA+GGG | - | chr2_1:64065202-64065221 | Msa0217280:CDS | 45.0% | |
GTCTAAGAAATTCGGCATCC+CGG | - | chr2_1:64065258-64065277 | Msa0217280:CDS | 45.0% | |
GTATCCCATGAAACTCAACC+GGG | + | chr2_1:64065279-64065298 | None:intergenic | 45.0% | |
GGTATCCCATGAAACTCAAC+CGG | + | chr2_1:64065280-64065299 | None:intergenic | 45.0% | |
AGCATGTCTCTTGTCACATC+TGG | + | chr2_1:64065313-64065332 | None:intergenic | 45.0% | |
TATCAGACACGGAGAAGCTT+TGG | - | chr2_1:64065336-64065355 | Msa0217280:CDS | 45.0% | |
TCCTAAAGTGGTTACCCTTG+TGG | - | chr2_1:64065456-64065475 | Msa0217280:CDS | 45.0% | |
TCCACAAGGGTAACCACTTT+AGG | + | chr2_1:64065460-64065479 | None:intergenic | 45.0% | |
CACCCTCTCAAGAAATAGCA+AGG | - | chr2_1:64065570-64065589 | Msa0217280:CDS | 45.0% | |
GTCAATGTCATTGCATGCGA+AGG | - | chr2_1:64065634-64065653 | Msa0217280:CDS | 45.0% | |
TGTCATTGCATGCGAAGGTA+AGG | - | chr2_1:64065639-64065658 | Msa0217280:CDS | 45.0% | |
TTGCATGCGAAGGTAAGGAA+AGG | - | chr2_1:64065644-64065663 | Msa0217280:CDS | 45.0% | |
TGCATGCGAAGGTAAGGAAA+GGG | - | chr2_1:64065645-64065664 | Msa0217280:CDS | 45.0% | |
GACACGAACTACTTGGTAAG+TGG | - | chr2_1:64065674-64065693 | Msa0217280:CDS | 45.0% | |
! | GTGGAAGTCTAGGTTGACAA+TGG | - | chr2_1:64065693-64065712 | Msa0217280:CDS | 45.0% |
! | AAGTCTAGGTTGACAATGGC+TGG | - | chr2_1:64065697-64065716 | Msa0217280:CDS | 45.0% |
! | GCTCTGAATAGCATCTCAGA+AGG | + | chr2_1:64065771-64065790 | None:intergenic | 45.0% |
AAAGATGGGGCAATGCTCTT+AGG | - | chr2_1:64065808-64065827 | Msa0217280:CDS | 45.0% | |
AAGATGGGGCAATGCTCTTA+GGG | - | chr2_1:64065809-64065828 | Msa0217280:CDS | 45.0% | |
AGCAAACCATTTGGCAGTGA+TGG | + | chr2_1:64064203-64064222 | None:intergenic | 45.0% | |
!! | TCACTGCCAAATGGTTTGCT+TGG | - | chr2_1:64064203-64064222 | Msa0217280:CDS | 45.0% |
!! | TGGTTTGCTTGGATCCTTGA+AGG | - | chr2_1:64064214-64064233 | Msa0217280:CDS | 45.0% |
TTGCTTGGATCCTTGAAGGT+TGG | - | chr2_1:64064218-64064237 | Msa0217280:CDS | 45.0% | |
GTTTCCAAAGCCAACCTTCA+AGG | + | chr2_1:64064231-64064250 | None:intergenic | 45.0% | |
AGAGGAAAACGGTGAATCAG+GGG | + | chr2_1:64064255-64064274 | None:intergenic | 45.0% | |
GAGAGGAAAACGGTGAATCA+GGG | + | chr2_1:64064256-64064275 | None:intergenic | 45.0% | |
TGAGAGGAAAACGGTGAATC+AGG | + | chr2_1:64064257-64064276 | None:intergenic | 45.0% | |
GGAACTAGAAACTGCTCTGA+TGG | - | chr2_1:64064499-64064518 | Msa0217280:CDS | 45.0% | |
GGTAACTTCGTTATCATCGG+GGG | + | chr2_1:64064525-64064544 | None:intergenic | 45.0% | |
!! | TTCATTGGGTGAGAGCATCA+AGG | - | chr2_1:64064556-64064575 | Msa0217280:CDS | 45.0% |
AGCATCAAGGAAACAGCATC+CGG | - | chr2_1:64064569-64064588 | Msa0217280:CDS | 45.0% | |
TCATGGAGTAATGAGCACCA+AGG | - | chr2_1:64064605-64064624 | Msa0217280:CDS | 45.0% | |
CATGGAGTAATGAGCACCAA+GGG | - | chr2_1:64064606-64064625 | Msa0217280:CDS | 45.0% | |
ATTTGATTGCCTGCTACTGC+TGG | + | chr2_1:64064666-64064685 | None:intergenic | 45.0% | |
TCTCTACAAGGGTTTCCATC+GGG | - | chr2_1:64064731-64064750 | Msa0217280:CDS | 45.0% | |
!! | CTCGGTGCTTATATGGTAGA+AGG | - | chr2_1:64064878-64064897 | Msa0217280:CDS | 45.0% |
!! | TGGTAGAAGGTCTTGTTGCA+AGG | - | chr2_1:64064891-64064910 | Msa0217280:CDS | 45.0% |
!! | AGAAGGTCTTGTTGCAAGGA+CGG | - | chr2_1:64064895-64064914 | Msa0217280:CDS | 45.0% |
TTCAGGCTCTCTGCACTTAA+GGG | + | chr2_1:64064948-64064967 | None:intergenic | 45.0% | |
TTTGGTTACATGGCTGCCAA+TGG | - | chr2_1:64065025-64065044 | Msa0217280:CDS | 45.0% | |
ATCCTCATTCCTGCATGCTT+CGG | + | chr2_1:64065059-64065078 | None:intergenic | 45.0% | |
TCAAAATATGCCCGTGGCAA+GGG | - | chr2_1:64065202-64065221 | Msa0217280:CDS | 45.0% | |
GTCTAAGAAATTCGGCATCC+CGG | - | chr2_1:64065258-64065277 | Msa0217280:CDS | 45.0% | |
GTATCCCATGAAACTCAACC+GGG | + | chr2_1:64065279-64065298 | None:intergenic | 45.0% | |
GGTATCCCATGAAACTCAAC+CGG | + | chr2_1:64065280-64065299 | None:intergenic | 45.0% | |
AGCATGTCTCTTGTCACATC+TGG | + | chr2_1:64065313-64065332 | None:intergenic | 45.0% | |
TATCAGACACGGAGAAGCTT+TGG | - | chr2_1:64065336-64065355 | Msa0217280:CDS | 45.0% | |
TCCTAAAGTGGTTACCCTTG+TGG | - | chr2_1:64065456-64065475 | Msa0217280:CDS | 45.0% | |
TCCACAAGGGTAACCACTTT+AGG | + | chr2_1:64065460-64065479 | None:intergenic | 45.0% | |
CACCCTCTCAAGAAATAGCA+AGG | - | chr2_1:64065570-64065589 | Msa0217280:CDS | 45.0% | |
GTCAATGTCATTGCATGCGA+AGG | - | chr2_1:64065634-64065653 | Msa0217280:CDS | 45.0% | |
TGTCATTGCATGCGAAGGTA+AGG | - | chr2_1:64065639-64065658 | Msa0217280:CDS | 45.0% | |
TTGCATGCGAAGGTAAGGAA+AGG | - | chr2_1:64065644-64065663 | Msa0217280:CDS | 45.0% | |
TGCATGCGAAGGTAAGGAAA+GGG | - | chr2_1:64065645-64065664 | Msa0217280:CDS | 45.0% | |
GACACGAACTACTTGGTAAG+TGG | - | chr2_1:64065674-64065693 | Msa0217280:CDS | 45.0% | |
! | GTGGAAGTCTAGGTTGACAA+TGG | - | chr2_1:64065693-64065712 | Msa0217280:CDS | 45.0% |
! | AAGTCTAGGTTGACAATGGC+TGG | - | chr2_1:64065697-64065716 | Msa0217280:CDS | 45.0% |
! | GCTCTGAATAGCATCTCAGA+AGG | + | chr2_1:64065771-64065790 | None:intergenic | 45.0% |
AAAGATGGGGCAATGCTCTT+AGG | - | chr2_1:64065808-64065827 | Msa0217280:CDS | 45.0% | |
AAGATGGGGCAATGCTCTTA+GGG | - | chr2_1:64065809-64065828 | Msa0217280:CDS | 45.0% | |
!! | GGATCCTTGAAGGTTGGCTT+TGG | - | chr2_1:64064224-64064243 | Msa0217280:CDS | 50.0% |
! | ACAAGGCGTGTCGGATTTTC+TGG | + | chr2_1:64064478-64064497 | None:intergenic | 50.0% |
GAAAATCCGACACGCCTTGT+TGG | - | chr2_1:64064478-64064497 | Msa0217280:CDS | 50.0% | |
CTAGTTCCAACAAGGCGTGT+CGG | + | chr2_1:64064487-64064506 | None:intergenic | 50.0% | |
CCATGATCTATATCTCGGGC+CGG | + | chr2_1:64064591-64064610 | None:intergenic | 50.0% | |
CTACTGCTGGTAACATGCGA+CGG | + | chr2_1:64064653-64064672 | None:intergenic | 50.0% | |
CTGTGCATGTAGAGAAACGG+CGG | - | chr2_1:64064690-64064709 | Msa0217280:CDS | 50.0% | |
TGTAGAGAAACGGCGGAAGT+TGG | - | chr2_1:64064697-64064716 | Msa0217280:CDS | 50.0% | |
GATTGCATGTGCCAAAGCCA+TGG | - | chr2_1:64064772-64064791 | Msa0217280:CDS | 50.0% | |
TGGCTCCCCGTTTATAGACA+CGG | + | chr2_1:64064849-64064868 | None:intergenic | 50.0% | |
!! | TTGCAAGGACGGAAGCATCA+GGG | - | chr2_1:64064906-64064925 | Msa0217280:CDS | 50.0% |
CTTCAGGCTCTCTGCACTTA+AGG | + | chr2_1:64064949-64064968 | None:intergenic | 50.0% | |
CTTAAGTGCAGAGAGCCTGA+AGG | - | chr2_1:64064947-64064966 | Msa0217280:CDS | 50.0% | |
ATTCCTGCATGCTTCGGCAA+TGG | + | chr2_1:64065053-64065072 | None:intergenic | 50.0% | |
!!! | CCACGGGCATATTTTGAGAC+TGG | + | chr2_1:64065199-64065218 | None:intergenic | 50.0% |
CCAGTCTCAAAATATGCCCG+TGG | - | chr2_1:64065196-64065215 | Msa0217280:CDS | 50.0% | |
CTCAAAATATGCCCGTGGCA+AGG | - | chr2_1:64065201-64065220 | Msa0217280:CDS | 50.0% | |
GCATCCCGGTTGAGTTTCAT+GGG | - | chr2_1:64065272-64065291 | Msa0217280:CDS | 50.0% | |
GTCACATCTGGACCGAAAAC+AGG | + | chr2_1:64065301-64065320 | None:intergenic | 50.0% | |
GCTGTGTGATGAAGTTGCAG+TGG | + | chr2_1:64065373-64065392 | None:intergenic | 50.0% | |
TCTTGAGAGGGTGACATCGA+TGG | + | chr2_1:64065563-64065582 | None:intergenic | 50.0% | |
TGGAGCAGCATTGTTTGGCT+CGG | - | chr2_1:64065605-64065624 | Msa0217280:CDS | 50.0% | |
!! | GGATCCTTGAAGGTTGGCTT+TGG | - | chr2_1:64064224-64064243 | Msa0217280:CDS | 50.0% |
! | ACAAGGCGTGTCGGATTTTC+TGG | + | chr2_1:64064478-64064497 | None:intergenic | 50.0% |
GAAAATCCGACACGCCTTGT+TGG | - | chr2_1:64064478-64064497 | Msa0217280:CDS | 50.0% | |
CTAGTTCCAACAAGGCGTGT+CGG | + | chr2_1:64064487-64064506 | None:intergenic | 50.0% | |
CCATGATCTATATCTCGGGC+CGG | + | chr2_1:64064591-64064610 | None:intergenic | 50.0% | |
CTACTGCTGGTAACATGCGA+CGG | + | chr2_1:64064653-64064672 | None:intergenic | 50.0% | |
CTGTGCATGTAGAGAAACGG+CGG | - | chr2_1:64064690-64064709 | Msa0217280:CDS | 50.0% | |
TGTAGAGAAACGGCGGAAGT+TGG | - | chr2_1:64064697-64064716 | Msa0217280:CDS | 50.0% | |
GATTGCATGTGCCAAAGCCA+TGG | - | chr2_1:64064772-64064791 | Msa0217280:CDS | 50.0% | |
TGGCTCCCCGTTTATAGACA+CGG | + | chr2_1:64064849-64064868 | None:intergenic | 50.0% | |
!! | TTGCAAGGACGGAAGCATCA+GGG | - | chr2_1:64064906-64064925 | Msa0217280:CDS | 50.0% |
CTTCAGGCTCTCTGCACTTA+AGG | + | chr2_1:64064949-64064968 | None:intergenic | 50.0% | |
CTTAAGTGCAGAGAGCCTGA+AGG | - | chr2_1:64064947-64064966 | Msa0217280:CDS | 50.0% | |
ATTCCTGCATGCTTCGGCAA+TGG | + | chr2_1:64065053-64065072 | None:intergenic | 50.0% | |
!!! | CCACGGGCATATTTTGAGAC+TGG | + | chr2_1:64065199-64065218 | None:intergenic | 50.0% |
CCAGTCTCAAAATATGCCCG+TGG | - | chr2_1:64065196-64065215 | Msa0217280:CDS | 50.0% | |
CTCAAAATATGCCCGTGGCA+AGG | - | chr2_1:64065201-64065220 | Msa0217280:CDS | 50.0% | |
GCATCCCGGTTGAGTTTCAT+GGG | - | chr2_1:64065272-64065291 | Msa0217280:CDS | 50.0% | |
GTCACATCTGGACCGAAAAC+AGG | + | chr2_1:64065301-64065320 | None:intergenic | 50.0% | |
GCTGTGTGATGAAGTTGCAG+TGG | + | chr2_1:64065373-64065392 | None:intergenic | 50.0% | |
TCTTGAGAGGGTGACATCGA+TGG | + | chr2_1:64065563-64065582 | None:intergenic | 50.0% | |
TGGAGCAGCATTGTTTGGCT+CGG | - | chr2_1:64065605-64065624 | Msa0217280:CDS | 50.0% | |
! | CTCCTGAGTTGTGTTGCTCG+TGG | + | chr2_1:64064316-64064335 | None:intergenic | 55.0% |
CCGGCCCGAGATATAGATCA+TGG | - | chr2_1:64064588-64064607 | Msa0217280:CDS | 55.0% | |
CGCATGTTACCAGCAGTAGC+AGG | - | chr2_1:64064654-64064673 | Msa0217280:CDS | 55.0% | |
GAAACGGCGGAAGTTGGAAG+AGG | - | chr2_1:64064703-64064722 | Msa0217280:CDS | 55.0% | |
TAAACGGGGAGCCAATCCAG+AGG | - | chr2_1:64064855-64064874 | Msa0217280:CDS | 55.0% | |
!! | TAAGCACCGAGCCTCTGGAT+TGG | + | chr2_1:64064869-64064888 | None:intergenic | 55.0% |
!! | CCATATAAGCACCGAGCCTC+TGG | + | chr2_1:64064874-64064893 | None:intergenic | 55.0% |
!! | CCAGAGGCTCGGTGCTTATA+TGG | - | chr2_1:64064871-64064890 | Msa0217280:CDS | 55.0% |
!! | GTTGCAAGGACGGAAGCATC+AGG | - | chr2_1:64064905-64064924 | Msa0217280:CDS | 55.0% |
TGCTTCGGCAATGGCTCCAT+TGG | + | chr2_1:64065044-64065063 | None:intergenic | 55.0% | |
TGCCGAAGCATGCAGGAATG+AGG | - | chr2_1:64065054-64065073 | Msa0217280:CDS | 55.0% | |
ATTCCTGTGATCCGCACGTG+GGG | + | chr2_1:64065169-64065188 | None:intergenic | 55.0% | |
GATTCCTGTGATCCGCACGT+GGG | + | chr2_1:64065170-64065189 | None:intergenic | 55.0% | |
TACTTCGAGTCCCTTGCCAC+GGG | + | chr2_1:64065215-64065234 | None:intergenic | 55.0% | |
CTACTTCGAGTCCCTTGCCA+CGG | + | chr2_1:64065216-64065235 | None:intergenic | 55.0% | |
GGCAAGGGACTCGAAGTAGT+TGG | - | chr2_1:64065217-64065236 | Msa0217280:CDS | 55.0% | |
GGCATCCCGGTTGAGTTTCA+TGG | - | chr2_1:64065271-64065290 | Msa0217280:CDS | 55.0% | |
! | CAGACACGGAGAAGCTTTGG+CGG | - | chr2_1:64065339-64065358 | Msa0217280:CDS | 55.0% |
! | GGAGCAGCATTGTTTGGCTC+GGG | - | chr2_1:64065606-64065625 | Msa0217280:CDS | 55.0% |
GTCGAGCGACACGAACTACT+TGG | - | chr2_1:64065667-64065686 | Msa0217280:CDS | 55.0% | |
ATGGGGCAATGCTCTTAGGG+TGG | - | chr2_1:64065812-64065831 | Msa0217280:CDS | 55.0% | |
! | CTCCTGAGTTGTGTTGCTCG+TGG | + | chr2_1:64064316-64064335 | None:intergenic | 55.0% |
CCGGCCCGAGATATAGATCA+TGG | - | chr2_1:64064588-64064607 | Msa0217280:CDS | 55.0% | |
CGCATGTTACCAGCAGTAGC+AGG | - | chr2_1:64064654-64064673 | Msa0217280:CDS | 55.0% | |
GAAACGGCGGAAGTTGGAAG+AGG | - | chr2_1:64064703-64064722 | Msa0217280:CDS | 55.0% | |
TAAACGGGGAGCCAATCCAG+AGG | - | chr2_1:64064855-64064874 | Msa0217280:CDS | 55.0% | |
!! | TAAGCACCGAGCCTCTGGAT+TGG | + | chr2_1:64064869-64064888 | None:intergenic | 55.0% |
!! | CCATATAAGCACCGAGCCTC+TGG | + | chr2_1:64064874-64064893 | None:intergenic | 55.0% |
!! | CCAGAGGCTCGGTGCTTATA+TGG | - | chr2_1:64064871-64064890 | Msa0217280:CDS | 55.0% |
!! | GTTGCAAGGACGGAAGCATC+AGG | - | chr2_1:64064905-64064924 | Msa0217280:CDS | 55.0% |
TGCTTCGGCAATGGCTCCAT+TGG | + | chr2_1:64065044-64065063 | None:intergenic | 55.0% | |
TGCCGAAGCATGCAGGAATG+AGG | - | chr2_1:64065054-64065073 | Msa0217280:CDS | 55.0% | |
ATTCCTGTGATCCGCACGTG+GGG | + | chr2_1:64065169-64065188 | None:intergenic | 55.0% | |
GATTCCTGTGATCCGCACGT+GGG | + | chr2_1:64065170-64065189 | None:intergenic | 55.0% | |
TACTTCGAGTCCCTTGCCAC+GGG | + | chr2_1:64065215-64065234 | None:intergenic | 55.0% | |
CTACTTCGAGTCCCTTGCCA+CGG | + | chr2_1:64065216-64065235 | None:intergenic | 55.0% | |
GGCAAGGGACTCGAAGTAGT+TGG | - | chr2_1:64065217-64065236 | Msa0217280:CDS | 55.0% | |
GGCATCCCGGTTGAGTTTCA+TGG | - | chr2_1:64065271-64065290 | Msa0217280:CDS | 55.0% | |
! | CAGACACGGAGAAGCTTTGG+CGG | - | chr2_1:64065339-64065358 | Msa0217280:CDS | 55.0% |
! | GGAGCAGCATTGTTTGGCTC+GGG | - | chr2_1:64065606-64065625 | Msa0217280:CDS | 55.0% |
GTCGAGCGACACGAACTACT+TGG | - | chr2_1:64065667-64065686 | Msa0217280:CDS | 55.0% | |
ATGGGGCAATGCTCTTAGGG+TGG | - | chr2_1:64065812-64065831 | Msa0217280:CDS | 55.0% | |
GGCCACGAGCAACACAACTC+AGG | - | chr2_1:64064311-64064330 | Msa0217280:CDS | 60.0% | |
GAGCCATTGCCGAAGCATGC+AGG | - | chr2_1:64065047-64065066 | Msa0217280:CDS | 60.0% | |
CAAGCTCTTGCCGCAAGACC+TGG | - | chr2_1:64065136-64065155 | Msa0217280:CDS | 60.0% | |
CTCTTGCCGCAAGACCTGGT+GGG | - | chr2_1:64065140-64065159 | Msa0217280:CDS | 60.0% | |
TCTTGCCGCAAGACCTGGTG+GGG | - | chr2_1:64065141-64065160 | Msa0217280:CDS | 60.0% | |
CGATTCCTGTGATCCGCACG+TGG | + | chr2_1:64065171-64065190 | None:intergenic | 60.0% | |
GGCCACGAGCAACACAACTC+AGG | - | chr2_1:64064311-64064330 | Msa0217280:CDS | 60.0% | |
GAGCCATTGCCGAAGCATGC+AGG | - | chr2_1:64065047-64065066 | Msa0217280:CDS | 60.0% | |
CAAGCTCTTGCCGCAAGACC+TGG | - | chr2_1:64065136-64065155 | Msa0217280:CDS | 60.0% | |
CTCTTGCCGCAAGACCTGGT+GGG | - | chr2_1:64065140-64065159 | Msa0217280:CDS | 60.0% | |
TCTTGCCGCAAGACCTGGTG+GGG | - | chr2_1:64065141-64065160 | Msa0217280:CDS | 60.0% | |
CGATTCCTGTGATCCGCACG+TGG | + | chr2_1:64065171-64065190 | None:intergenic | 60.0% | |
GGGGAGCCAATCCAGAGGCT+CGG | - | chr2_1:64064860-64064879 | Msa0217280:CDS | 65.0% | |
GCTCTTGCCGCAAGACCTGG+TGG | - | chr2_1:64065139-64065158 | Msa0217280:CDS | 65.0% | |
GGGGAGCCAATCCAGAGGCT+CGG | - | chr2_1:64064860-64064879 | Msa0217280:CDS | 65.0% | |
GCTCTTGCCGCAAGACCTGG+TGG | - | chr2_1:64065139-64065158 | Msa0217280:CDS | 65.0% | |
GGGTGCCCCACCAGGTCTTG+CGG | + | chr2_1:64065149-64065168 | None:intergenic | 70.0% | |
GCACCCCACGTGCGGATCAC+AGG | - | chr2_1:64065163-64065182 | Msa0217280:CDS | 70.0% | |
GGGTGCCCCACCAGGTCTTG+CGG | + | chr2_1:64065149-64065168 | None:intergenic | 70.0% | |
GCACCCCACGTGCGGATCAC+AGG | - | chr2_1:64065163-64065182 | Msa0217280:CDS | 70.0% | |
! | CTGGTGGGGCACCCCACGTG+CGG | - | chr2_1:64065155-64065174 | Msa0217280:CDS | 75.0% |
! | CTGGTGGGGCACCCCACGTG+CGG | - | chr2_1:64065155-64065174 | Msa0217280:CDS | 75.0% |
!! | CGCACGTGGGGTGCCCCACC+AGG | + | chr2_1:64065157-64065176 | None:intergenic | 80.0% |
!! | CGCACGTGGGGTGCCCCACC+AGG | + | chr2_1:64065157-64065176 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 64064134 | 64065873 | 64064134 | ID=Msa0217280;Name=Msa0217280 |
chr2_1 | mRNA | 64064134 | 64065873 | 64064134 | ID=Msa0217280-mRNA-1;Parent=Msa0217280;Name=Msa0217280-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|579 |
chr2_1 | exon | 64064134 | 64065873 | 64064134 | ID=Msa0217280-mRNA-1:exon:17729;Parent=Msa0217280-mRNA-1 |
chr2_1 | CDS | 64064134 | 64065873 | 64064134 | ID=Msa0217280-mRNA-1:cds;Parent=Msa0217280-mRNA-1 |
Gene Sequence |
Protein sequence |