Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220120 | XP_013465014.1 | 68.966 | 87 | 2 | 1 | 2 | 63 | 5 | 91 | 1.98e-29 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220120 | A0A072VAI4 | 68.966 | 87 | 2 | 1 | 2 | 63 | 5 | 91 | 9.44e-30 | 109 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0220120 | Msa0227790 | 0.817976 | 2.494013e-52 | -8.615850e-47 |
| Msa0220120 | Msa0261460 | 0.824323 | 8.589814e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220120 | MtrunA17_Chr2g0323631 | 68.966 | 87 | 2 | 1 | 2 | 63 | 5 | 91 | 1.82e-33 | 109 |
| Msa0220120 | MtrunA17_Chr2g0323671 | 67.816 | 87 | 3 | 1 | 2 | 63 | 5 | 91 | 1.78e-32 | 107 |
| Msa0220120 | MtrunA17_Chr2g0323571 | 67.816 | 87 | 3 | 1 | 2 | 63 | 5 | 91 | 1.84e-32 | 107 |
| Msa0220120 | MtrunA17_Chr2g0323701 | 49.412 | 85 | 15 | 3 | 6 | 63 | 6 | 89 | 1.68e-17 | 69.3 |
| Msa0220120 | MtrunA17_Chr2g0323611 | 50.000 | 76 | 17 | 2 | 8 | 63 | 10 | 84 | 1.43e-16 | 66.6 |
| Msa0220120 | MtrunA17_Chr2g0323661 | 52.632 | 76 | 15 | 3 | 8 | 63 | 10 | 84 | 1.82e-16 | 66.6 |
| Msa0220120 | MtrunA17_Chr2g0323721 | 47.059 | 85 | 17 | 3 | 6 | 63 | 6 | 89 | 1.96e-16 | 66.6 |
| Msa0220120 | MtrunA17_Chr4g0022611 | 47.059 | 85 | 17 | 3 | 6 | 63 | 6 | 89 | 4.35e-16 | 65.5 |
| Msa0220120 | MtrunA17_Chr2g0323651 | 41.111 | 90 | 25 | 2 | 2 | 63 | 2 | 91 | 3.61e-14 | 60.8 |
| Msa0220120 | MtrunA17_Chr2g0323711 | 41.111 | 90 | 25 | 2 | 2 | 63 | 2 | 91 | 3.61e-14 | 60.8 |
| Msa0220120 | MtrunA17_Chr2g0323601 | 41.758 | 91 | 24 | 3 | 2 | 63 | 2 | 92 | 3.74e-14 | 60.8 |
| Msa0220120 | MtrunA17_Chr2g0323681 | 40.000 | 95 | 24 | 2 | 2 | 63 | 2 | 96 | 4.58e-13 | 58.2 |
| Msa0220120 | MtrunA17_Chr2g0323551 | 44.828 | 87 | 21 | 3 | 3 | 63 | 3 | 88 | 7.72e-13 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220120 | AT4G10265.1 | 48.837 | 86 | 14 | 2 | 2 | 62 | 2 | 82 | 2.62e-16 | 66.2 |
| Msa0220120 | AT4G10270.1 | 43.820 | 89 | 23 | 2 | 2 | 63 | 2 | 90 | 2.90e-15 | 63.9 |
Find 19 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCTTTCTACCAAATTTA+AGG | 0.083061 | 2_1:+68316210 | Msa0220120:CDS |
| CTTCTTCTCATCCTTAAATT+TGG | 0.217937 | 2_1:-68316221 | None:intergenic |
| CAAAGACTCCTCTGCCTGTT+TGG | 0.289223 | 2_1:-68316245 | None:intergenic |
| CTATGTACAAATTAATCAAT+TGG | 0.386618 | 2_1:-68316299 | None:intergenic |
| TGTCATGTACTTGAGTTGTT+GGG | 0.390564 | 2_1:+68316273 | Msa0220120:CDS |
| GGATGAGAAGAAGGCCAAAC+AGG | 0.421065 | 2_1:+68316231 | Msa0220120:CDS |
| CTGTCATGTACTTGAGTTGT+TGG | 0.433953 | 2_1:+68316272 | Msa0220120:CDS |
| AACAGGCAGAGGAGTCTTTG+AGG | 0.455186 | 2_1:+68316248 | Msa0220120:CDS |
| GGCTGCAAGTGTTGGAGTTG+TGG | 0.471925 | 2_1:+68313128 | Msa0220120:CDS |
| TATGTACAAATTAATCAATT+GGG | 0.486617 | 2_1:-68316298 | None:intergenic |
| CAAATTTAAGGATGAGAAGA+AGG | 0.489333 | 2_1:+68316222 | Msa0220120:CDS |
| GAAGAAGGCCAAACAGGCAG+AGG | 0.519704 | 2_1:+68316237 | Msa0220120:CDS |
| AGCAACAAGCAAAGCATGGA+TGG | 0.545771 | 2_1:+68313104 | Msa0220120:CDS |
| GTCATGTACTTGAGTTGTTG+GGG | 0.568395 | 2_1:+68316274 | Msa0220120:CDS |
| TGGATGGTGGCTGCAAGTGT+TGG | 0.573709 | 2_1:+68313120 | Msa0220120:CDS |
| TGCAAGTGTTGGAGTTGTGG+AGG | 0.587512 | 2_1:+68313131 | Msa0220120:CDS |
| GCACAGCAACAAGCAAAGCA+TGG | 0.597578 | 2_1:+68313100 | Msa0220120:CDS |
| AACAAGCAAAGCATGGATGG+TGG | 0.650577 | 2_1:+68313107 | Msa0220120:CDS |
| GAGGCTTTGAAAGATCAAGC+CGG | 0.680929 | 2_1:+68313150 | Msa0220120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACTTTTACTATAAATAT+AGG | + | chr2_1:68313350-68313369 | Msa0220120:intron | 10.0% |
| !!! | AAAACTTTTACTATAAATAT+AGG | + | chr2_1:68313350-68313369 | Msa0220120:intron | 10.0% |
| !!! | TAAAAGTTTTGCTTAAAATT+TGG | - | chr2_1:68313340-68313359 | None:intergenic | 15.0% |
| !!! | TAAAAGTTTTGCTTAAAATT+TGG | - | chr2_1:68313340-68313359 | None:intergenic | 15.0% |
| !! | ATTTCTTTCTACCAAATTTA+AGG | + | chr2_1:68316210-68316229 | Msa0220120:CDS | 20.0% |
| ! | TTAAGTTAACTCTTACATAC+CGG | - | chr2_1:68313172-68313191 | None:intergenic | 25.0% |
| ! | GTAAGAGTTAACTTAAAATC+AGG | + | chr2_1:68313176-68313195 | Msa0220120:intron | 25.0% |
| ! | TCTTAAAATAGTCTGATACA+AGG | - | chr2_1:68313376-68313395 | None:intergenic | 25.0% |
| !!! | ACTATTTTAAGAGAGATAGA+GGG | + | chr2_1:68313384-68313403 | Msa0220120:intron | 25.0% |
| ! | TTTGTATATGACAAAGTCTT+TGG | + | chr2_1:68314148-68314167 | Msa0220120:intron | 25.0% |
| ! | TTAAACGATTCAAAAGATCT+AGG | - | chr2_1:68314338-68314357 | None:intergenic | 25.0% |
| ! | GTAAGAGTTAACTTAAAATC+AGG | + | chr2_1:68313176-68313195 | Msa0220120:intron | 25.0% |
| ! | TCTTAAAATAGTCTGATACA+AGG | - | chr2_1:68313376-68313395 | None:intergenic | 25.0% |
| !!! | ACTATTTTAAGAGAGATAGA+GGG | + | chr2_1:68313384-68313403 | Msa0220120:intron | 25.0% |
| TAAAATCAGGTTCAGAAATC+AGG | + | chr2_1:68313189-68313208 | Msa0220120:intron | 30.0% | |
| !! | GACTATTTTAAGAGAGATAG+AGG | + | chr2_1:68313383-68313402 | Msa0220120:intron | 30.0% |
| !! | CTATTTTAAGAGAGATAGAG+GGG | + | chr2_1:68313385-68313404 | Msa0220120:intron | 30.0% |
| TTTGTATAGAGTTTGTCTCT+TGG | + | chr2_1:68313447-68313466 | Msa0220120:intron | 30.0% | |
| !! | TGTTCCATACACTTTGATTT+TGG | + | chr2_1:68313744-68313763 | Msa0220120:intron | 30.0% |
| AAAGGATAATCAAGTACCAT+GGG | + | chr2_1:68313864-68313883 | Msa0220120:intron | 30.0% | |
| TTTAAAGATACCATGCTCTA+TGG | + | chr2_1:68314353-68314372 | Msa0220120:intron | 30.0% | |
| ! | ATGCTTTAAGTGTAACAAGA+TGG | + | chr2_1:68314547-68314566 | Msa0220120:intron | 30.0% |
| ! | TGCTTTAAGTGTAACAAGAT+GGG | + | chr2_1:68314548-68314567 | Msa0220120:intron | 30.0% |
| ACGAAATTACCATTAATCTC+CGG | - | chr2_1:68314593-68314612 | None:intergenic | 30.0% | |
| TAAGAATACTCATGATCTAC+CGG | + | chr2_1:68314769-68314788 | Msa0220120:intron | 30.0% | |
| ! | CAAACTACTCAAGGAATTTT+AGG | - | chr2_1:68315202-68315221 | None:intergenic | 30.0% |
| CTAAAATTCCTTGAGTAGTT+TGG | + | chr2_1:68315200-68315219 | Msa0220120:intron | 30.0% | |
| TAAAATCAGGTTCAGAAATC+AGG | + | chr2_1:68313189-68313208 | Msa0220120:intron | 30.0% | |
| !! | GACTATTTTAAGAGAGATAG+AGG | + | chr2_1:68313383-68313402 | Msa0220120:intron | 30.0% |
| !! | CTATTTTAAGAGAGATAGAG+GGG | + | chr2_1:68313385-68313404 | Msa0220120:intron | 30.0% |
| TTTGTATAGAGTTTGTCTCT+TGG | + | chr2_1:68313447-68313466 | Msa0220120:intron | 30.0% | |
| !! | TGTTCCATACACTTTGATTT+TGG | + | chr2_1:68313744-68313763 | Msa0220120:intron | 30.0% |
| ! | TTGATCTAACACGGTTTTTA+AGG | - | chr2_1:68316159-68316178 | None:intergenic | 30.0% |
| CTTCTTCTCATCCTTAAATT+TGG | - | chr2_1:68316224-68316243 | None:intergenic | 30.0% | |
| CAAATTTAAGGATGAGAAGA+AGG | + | chr2_1:68316222-68316241 | Msa0220120:CDS | 30.0% | |
| AGAAAGGCAACAACAAAACT+AGG | + | chr2_1:68313423-68313442 | Msa0220120:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | + | chr2_1:68313424-68313443 | Msa0220120:intron | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | - | chr2_1:68313503-68313522 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr2_1:68313511-68313530 | Msa0220120:intron | 35.0% | |
| TAACGCTACTCATCATATAG+TGG | + | chr2_1:68313601-68313620 | Msa0220120:intron | 35.0% | |
| ! | CTACTCATCATATAGTGGAA+CGG | + | chr2_1:68313606-68313625 | Msa0220120:intron | 35.0% |
| !! | AAGAATTTGTTGACCCAGTT+CGG | - | chr2_1:68313668-68313687 | None:intergenic | 35.0% |
| GAAAACAACAGCGAAAGAAA+AGG | - | chr2_1:68313704-68313723 | None:intergenic | 35.0% | |
| !!! | TCGCTGTTGTTTTCTACTTT+TGG | + | chr2_1:68313710-68313729 | Msa0220120:intron | 35.0% |
| GCAACCAAAATCAAAGTGTA+TGG | - | chr2_1:68313751-68313770 | None:intergenic | 35.0% | |
| ! | TCCACACATCAAGTTGTTAT+TGG | + | chr2_1:68313786-68313805 | Msa0220120:intron | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | - | chr2_1:68313790-68313809 | None:intergenic | 35.0% | |
| CAAAGGATAATCAAGTACCA+TGG | + | chr2_1:68313863-68313882 | Msa0220120:intron | 35.0% | |
| TGGGATATTGAGAAGTTTAC+CGG | + | chr2_1:68313894-68313913 | Msa0220120:intron | 35.0% | |
| ! | TTTACCGGAGATAACGATTT+TGG | + | chr2_1:68313909-68313928 | Msa0220120:intron | 35.0% |
| ! | TTACCGGAGATAACGATTTT+GGG | + | chr2_1:68313910-68313929 | Msa0220120:intron | 35.0% |
| TAACCCAAAATCGTTATCTC+CGG | - | chr2_1:68313916-68313935 | None:intergenic | 35.0% | |
| !!! | GAGATAACGATTTTGGGTTA+TGG | + | chr2_1:68313916-68313935 | Msa0220120:intron | 35.0% |
| !!! | TAACGATTTTGGGTTATGGA+AGG | + | chr2_1:68313920-68313939 | Msa0220120:intron | 35.0% |
| ! | AAAGTGTGAGAAAGCTTTGA+AGG | + | chr2_1:68313971-68313990 | Msa0220120:intron | 35.0% |
| !! | AAGTGTGAGAAAGCTTTGAA+GGG | + | chr2_1:68313972-68313991 | Msa0220120:intron | 35.0% |
| !!! | AGTTTTGAGAGAAGTAGCAA+AGG | + | chr2_1:68314088-68314107 | Msa0220120:intron | 35.0% |
| !! | ATGAGTAGAGTTGTTGCTTT+AGG | - | chr2_1:68314187-68314206 | None:intergenic | 35.0% |
| ACAACTCTACTCATTCAAGA+TGG | + | chr2_1:68314193-68314212 | Msa0220120:intron | 35.0% | |
| ! | CAACAAAATCCTTGATGACT+TGG | + | chr2_1:68314253-68314272 | Msa0220120:intron | 35.0% |
| CAATATTCTCCAAGTCATCA+AGG | - | chr2_1:68314265-68314284 | None:intergenic | 35.0% | |
| ! | TGATGACTTGGAGAATATTG+AGG | + | chr2_1:68314265-68314284 | Msa0220120:intron | 35.0% |
| GAATATTGAGGTGAATCTTG+AGG | + | chr2_1:68314277-68314296 | Msa0220120:intron | 35.0% | |
| !! | GACTTGAGAGTTGATGAAAA+CGG | + | chr2_1:68314446-68314465 | Msa0220120:intron | 35.0% |
| !! | ACTTGAGAGTTGATGAAAAC+GGG | + | chr2_1:68314447-68314466 | Msa0220120:intron | 35.0% |
| TTTCGTACAAATTGTCTCTG+AGG | + | chr2_1:68314607-68314626 | Msa0220120:intron | 35.0% | |
| TTCGTACAAATTGTCTCTGA+GGG | + | chr2_1:68314608-68314627 | Msa0220120:intron | 35.0% | |
| TTCAAGGTTGAAGACATAGT+GGG | + | chr2_1:68314804-68314823 | Msa0220120:intron | 35.0% | |
| AAGGGATTTCTTCATGAAGA+CGG | + | chr2_1:68314938-68314957 | Msa0220120:intron | 35.0% | |
| GAATTACCCTAAAAGTCCAA+GGG | + | chr2_1:68315002-68315021 | Msa0220120:intron | 35.0% | |
| CAAACTACACTAGGAATTTC+AGG | - | chr2_1:68315106-68315125 | None:intergenic | 35.0% | |
| CTGAAATTCCTAGTGTAGTT+TGG | + | chr2_1:68315104-68315123 | Msa0220120:intron | 35.0% | |
| TTCCGATGATTGAAGAAGTT+AGG | + | chr2_1:68315254-68315273 | Msa0220120:intron | 35.0% | |
| TCCGATGATTGAAGAAGTTA+GGG | + | chr2_1:68315255-68315274 | Msa0220120:intron | 35.0% | |
| ACCCTAACTTCTTCAATCAT+CGG | - | chr2_1:68315259-68315278 | None:intergenic | 35.0% | |
| !! | TCATCACTGATTTGAAGTCA+AGG | + | chr2_1:68315349-68315368 | Msa0220120:intron | 35.0% |
| AGAAAGGCAACAACAAAACT+AGG | + | chr2_1:68313423-68313442 | Msa0220120:intron | 35.0% | |
| GAAAGGCAACAACAAAACTA+GGG | + | chr2_1:68313424-68313443 | Msa0220120:intron | 35.0% | |
| AATCCTAATAGTGTTTCCCA+AGG | - | chr2_1:68313503-68313522 | None:intergenic | 35.0% | |
| ACTATTAGGATTGAGTCTCT+TGG | + | chr2_1:68313511-68313530 | Msa0220120:intron | 35.0% | |
| TAACGCTACTCATCATATAG+TGG | + | chr2_1:68313601-68313620 | Msa0220120:intron | 35.0% | |
| ! | CTACTCATCATATAGTGGAA+CGG | + | chr2_1:68313606-68313625 | Msa0220120:intron | 35.0% |
| !! | AAGAATTTGTTGACCCAGTT+CGG | - | chr2_1:68313668-68313687 | None:intergenic | 35.0% |
| GAAAACAACAGCGAAAGAAA+AGG | - | chr2_1:68313704-68313723 | None:intergenic | 35.0% | |
| !!! | TCGCTGTTGTTTTCTACTTT+TGG | + | chr2_1:68313710-68313729 | Msa0220120:intron | 35.0% |
| GCAACCAAAATCAAAGTGTA+TGG | - | chr2_1:68313751-68313770 | None:intergenic | 35.0% | |
| ! | TCCACACATCAAGTTGTTAT+TGG | + | chr2_1:68313786-68313805 | Msa0220120:intron | 35.0% |
| ACCAATAACAACTTGATGTG+TGG | - | chr2_1:68313790-68313809 | None:intergenic | 35.0% | |
| CTTGAGACATTGATCTAACA+CGG | - | chr2_1:68316168-68316187 | None:intergenic | 35.0% | |
| ! | TGTCATGTACTTGAGTTGTT+GGG | + | chr2_1:68316273-68316292 | Msa0220120:CDS | 35.0% |
| GCTGAAACAAGGGTTTAGAA+AGG | + | chr2_1:68313407-68313426 | Msa0220120:intron | 40.0% | |
| TGTCTCTTGGCAACAAAACT+AGG | + | chr2_1:68313460-68313479 | Msa0220120:intron | 40.0% | |
| GTCTCTTGGCAACAAAACTA+GGG | + | chr2_1:68313461-68313480 | Msa0220120:intron | 40.0% | |
| GCAACAAAACTAGGGTTTGT+GGG | + | chr2_1:68313469-68313488 | Msa0220120:intron | 40.0% | |
| !! | TTTGTGGGTTGATTCACCTT+GGG | + | chr2_1:68313484-68313503 | Msa0220120:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | + | chr2_1:68313497-68313516 | Msa0220120:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | + | chr2_1:68313517-68313536 | Msa0220120:intron | 40.0% | |
| TGAGTAGCGTTACAAAGAGA+TGG | - | chr2_1:68313593-68313612 | None:intergenic | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | + | chr2_1:68313610-68313629 | Msa0220120:intron | 40.0% |
| CTCATCGAATCCTCAACAAT+TGG | + | chr2_1:68313819-68313838 | Msa0220120:intron | 40.0% | |
| TGGGTTATGGAAGGTAAAGA+TGG | + | chr2_1:68313929-68313948 | Msa0220120:intron | 40.0% | |
| ATGGAAGGTAAAGATGGAAG+CGG | + | chr2_1:68313935-68313954 | Msa0220120:intron | 40.0% | |
| CTCTCAAAACTTTATCACCG+AGG | - | chr2_1:68314079-68314098 | None:intergenic | 40.0% | |
| ! | TGACAAAGTCTTTGGCTCAT+CGG | + | chr2_1:68314156-68314175 | Msa0220120:intron | 40.0% |
| ACTCTACTCATTCAAGATGG+TGG | + | chr2_1:68314196-68314215 | Msa0220120:intron | 40.0% | |
| !! | ATTCAAGATGGTGGAGTCAA+AGG | + | chr2_1:68314205-68314224 | Msa0220120:intron | 40.0% |
| ACCATGCTCTATGGAAAAGA+AGG | + | chr2_1:68314362-68314381 | Msa0220120:intron | 40.0% | |
| !! | AAAAGAAGGCACTGTTACCT+TGG | + | chr2_1:68314376-68314395 | Msa0220120:intron | 40.0% |
| !! | CTTGAGAGTTGATGAAAACG+GGG | + | chr2_1:68314448-68314467 | Msa0220120:intron | 40.0% |
| AAGGCCTAAGTGTTTCAAGA+GGG | + | chr2_1:68314471-68314490 | Msa0220120:intron | 40.0% | |
| CATTCCCTCTTGAAACACTT+AGG | - | chr2_1:68314478-68314497 | None:intergenic | 40.0% | |
| CTAAGTGTTTCAAGAGGGAA+TGG | + | chr2_1:68314476-68314495 | Msa0220120:intron | 40.0% | |
| TCTTGTTACTACTCTTTCCC+CGG | - | chr2_1:68314517-68314536 | None:intergenic | 40.0% | |
| TCACTTCAAGAAGGATTGTC+CGG | + | chr2_1:68314571-68314590 | Msa0220120:intron | 40.0% | |
| AAGGATTGTCCGGAGATTAA+TGG | + | chr2_1:68314581-68314600 | Msa0220120:intron | 40.0% | |
| ! | AATTGTCTCTGAGGGTTATG+AGG | + | chr2_1:68314616-68314635 | Msa0220120:intron | 40.0% |
| AAGGTGATGTTTCTCACCTT+GGG | + | chr2_1:68314675-68314694 | Msa0220120:intron | 40.0% | |
| TTAAACACTCAACATCAGCC+TGG | + | chr2_1:68314735-68314754 | Msa0220120:intron | 40.0% | |
| GTTCAAGGTTGAAGACATAG+TGG | + | chr2_1:68314803-68314822 | Msa0220120:intron | 40.0% | |
| ! | GTACTCATTTGCTAGTTGAG+AGG | + | chr2_1:68314829-68314848 | Msa0220120:intron | 40.0% |
| ! | TCATTTGCTAGTTGAGAGGT+TGG | + | chr2_1:68314833-68314852 | Msa0220120:intron | 40.0% |
| ! | TTAGGTGGATTTGAACACAC+CGG | + | chr2_1:68314866-68314885 | Msa0220120:intron | 40.0% |
| GATTTCTTCATGAAGACGGA+AGG | + | chr2_1:68314942-68314961 | Msa0220120:intron | 40.0% | |
| GGAATTACCCTAAAAGTCCA+AGG | + | chr2_1:68315001-68315020 | Msa0220120:intron | 40.0% | |
| ! | CAATCACCCTTGGACTTTTA+GGG | - | chr2_1:68315011-68315030 | None:intergenic | 40.0% |
| TGTCTCGTATTGAAGAGGTA+TGG | + | chr2_1:68315062-68315081 | Msa0220120:intron | 40.0% | |
| CCTTGTATCCAAACTACACT+AGG | - | chr2_1:68315115-68315134 | None:intergenic | 40.0% | |
| CCTAGTGTAGTTTGGATACA+AGG | + | chr2_1:68315112-68315131 | Msa0220120:intron | 40.0% | |
| GAAGTTAGGGTGTAAACTTG+TGG | + | chr2_1:68315268-68315287 | Msa0220120:intron | 40.0% | |
| TGTAAACTTGTGGAGCTACT+TGG | + | chr2_1:68315278-68315297 | Msa0220120:intron | 40.0% | |
| !! | TCACTGATTTGAAGTCAAGG+TGG | + | chr2_1:68315352-68315371 | Msa0220120:intron | 40.0% |
| ! | ATTTTTCCAGTGCTTGCATC+AGG | - | chr2_1:68315511-68315530 | None:intergenic | 40.0% |
| GCTGAAACAAGGGTTTAGAA+AGG | + | chr2_1:68313407-68313426 | Msa0220120:intron | 40.0% | |
| TGTCTCTTGGCAACAAAACT+AGG | + | chr2_1:68313460-68313479 | Msa0220120:intron | 40.0% | |
| GTCTCTTGGCAACAAAACTA+GGG | + | chr2_1:68313461-68313480 | Msa0220120:intron | 40.0% | |
| GCAACAAAACTAGGGTTTGT+GGG | + | chr2_1:68313469-68313488 | Msa0220120:intron | 40.0% | |
| !! | TTTGTGGGTTGATTCACCTT+GGG | + | chr2_1:68313484-68313503 | Msa0220120:intron | 40.0% |
| TCACCTTGGGAAACACTATT+AGG | + | chr2_1:68313497-68313516 | Msa0220120:intron | 40.0% | |
| AGGATTGAGTCTCTTGGTTA+CGG | + | chr2_1:68313517-68313536 | Msa0220120:intron | 40.0% | |
| TGAGTAGCGTTACAAAGAGA+TGG | - | chr2_1:68313593-68313612 | None:intergenic | 40.0% | |
| ! | TCATCATATAGTGGAACGGA+GGG | + | chr2_1:68313610-68313629 | Msa0220120:intron | 40.0% |
| TTCTCATCGAATCCTCAACA+CGG | + | chr2_1:68316091-68316110 | Msa0220120:intron | 40.0% | |
| ! | CTGTCATGTACTTGAGTTGT+TGG | + | chr2_1:68316272-68316291 | Msa0220120:CDS | 40.0% |
| ! | GTCATGTACTTGAGTTGTTG+GGG | + | chr2_1:68316274-68316293 | Msa0220120:CDS | 40.0% |
| AGCAACAAGCAAAGCATGGA+TGG | + | chr2_1:68313104-68313123 | Msa0220120:CDS | 45.0% | |
| AACAAGCAAAGCATGGATGG+TGG | + | chr2_1:68313107-68313126 | Msa0220120:CDS | 45.0% | |
| !! | GAGGCTTTGAAAGATCAAGC+CGG | + | chr2_1:68313150-68313169 | Msa0220120:CDS | 45.0% |
| AGATAGAGGGGCTGAAACAA+GGG | + | chr2_1:68313397-68313416 | Msa0220120:intron | 45.0% | |
| GGCAACAAAACTAGGGTTTG+TGG | + | chr2_1:68313468-68313487 | Msa0220120:intron | 45.0% | |
| !! | GTTTGTGGGTTGATTCACCT+TGG | + | chr2_1:68313483-68313502 | Msa0220120:intron | 45.0% |
| GGATTGAGTCTCTTGGTTAC+GGG | + | chr2_1:68313518-68313537 | Msa0220120:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | + | chr2_1:68313546-68313565 | Msa0220120:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | + | chr2_1:68313549-68313568 | Msa0220120:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | + | chr2_1:68313550-68313569 | Msa0220120:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | + | chr2_1:68313609-68313628 | Msa0220120:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | - | chr2_1:68313645-68313664 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | - | chr2_1:68313646-68313665 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | - | chr2_1:68313647-68313666 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | chr2_1:68313651-68313670 | Msa0220120:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | + | chr2_1:68313652-68313671 | Msa0220120:intron | 45.0% | |
| AAGTACCATGGGTTCGAAGT+GGG | + | chr2_1:68313875-68313894 | Msa0220120:intron | 45.0% | |
| AATATCCCACTTCGAACCCA+TGG | - | chr2_1:68313883-68313902 | None:intergenic | 45.0% | |
| !! | GAGAAAGCTTTGAAGGGTGA+AGG | + | chr2_1:68313978-68313997 | Msa0220120:intron | 45.0% |
| AGTACCATTGTCTTGTGCCT+CGG | + | chr2_1:68314059-68314078 | Msa0220120:intron | 45.0% | |
| ! | GCCTTCTTTTCCATAGAGCA+TGG | - | chr2_1:68314366-68314385 | None:intergenic | 45.0% |
| AGCTGCTTGAACTTCTTCCA+AGG | - | chr2_1:68314396-68314415 | None:intergenic | 45.0% | |
| !! | TCAAGCAGCTTTGAGAACCA+AGG | + | chr2_1:68314406-68314425 | Msa0220120:intron | 45.0% |
| CTTCGACTTAGTCAACTCCT+TGG | - | chr2_1:68314426-68314445 | None:intergenic | 45.0% | |
| CAAGGAGTTGACTAAGTCGA+AGG | + | chr2_1:68314424-68314443 | Msa0220120:intron | 45.0% | |
| !! | AGAGTTGATGAAAACGGGGA+AGG | + | chr2_1:68314452-68314471 | Msa0220120:intron | 45.0% |
| GAAGGCCTAAGTGTTTCAAG+AGG | + | chr2_1:68314470-68314489 | Msa0220120:intron | 45.0% | |
| AGTGTTTCAAGAGGGAATGG+TGG | + | chr2_1:68314479-68314498 | Msa0220120:intron | 45.0% | |
| CAAGATGGGTCACTTCAAGA+AGG | + | chr2_1:68314562-68314581 | Msa0220120:intron | 45.0% | |
| !! | TGCTTTGATGGTGTGCTGTT+TGG | + | chr2_1:68314646-68314665 | Msa0220120:intron | 45.0% |
| !! | TTTGATGGTGTGCTGTTTGG+AGG | + | chr2_1:68314649-68314668 | Msa0220120:intron | 45.0% |
| GAAGGTGATGTTTCTCACCT+TGG | + | chr2_1:68314674-68314693 | Msa0220120:intron | 45.0% | |
| AGGTGATGTTTCTCACCTTG+GGG | + | chr2_1:68314676-68314695 | Msa0220120:intron | 45.0% | |
| ! | TACTCATGATCTACCGGTTG+AGG | + | chr2_1:68314775-68314794 | Msa0220120:intron | 45.0% |
| ! | TAGGTGGATTTGAACACACC+GGG | + | chr2_1:68314867-68314886 | Msa0220120:intron | 45.0% |
| TATGCTCTAGTGGTGAGCAA+GGG | + | chr2_1:68314920-68314939 | Msa0220120:intron | 45.0% | |
| TCCGGAGGTTGAAGAATGTA+TGG | + | chr2_1:68314968-68314987 | Msa0220120:intron | 45.0% | |
| GCCATACATTCTTCAACCTC+CGG | - | chr2_1:68314972-68314991 | None:intergenic | 45.0% | |
| AGAATGTATGGCACGACTTG+TGG | + | chr2_1:68314980-68314999 | Msa0220120:intron | 45.0% | |
| ! | CCAATCACCCTTGGACTTTT+AGG | - | chr2_1:68315012-68315031 | None:intergenic | 45.0% |
| CCTAAAAGTCCAAGGGTGAT+TGG | + | chr2_1:68315009-68315028 | Msa0220120:intron | 45.0% | |
| TGGATGCAAGGTGATCTTCA+AGG | + | chr2_1:68315029-68315048 | Msa0220120:intron | 45.0% | |
| CAAGGTGATCTTCAAGGAAG+CGG | + | chr2_1:68315035-68315054 | Msa0220120:intron | 45.0% | |
| AAGGTGATCTTCAAGGAAGC+GGG | + | chr2_1:68315036-68315055 | Msa0220120:intron | 45.0% | |
| GGAGATGTCTCGTATTGAAG+AGG | + | chr2_1:68315057-68315076 | Msa0220120:intron | 45.0% | |
| GGATACAAGGATCTTCGAGA+AGG | + | chr2_1:68315125-68315144 | Msa0220120:intron | 45.0% | |
| TACAAGGATCTTCGAGAAGG+CGG | + | chr2_1:68315128-68315147 | Msa0220120:intron | 45.0% | |
| ACCTTAACCTCTTCAGCCAT+CGG | - | chr2_1:68315162-68315181 | None:intergenic | 45.0% | |
| GAGGTTAAGGTGTGTACTTG+TGG | + | chr2_1:68315171-68315190 | Msa0220120:intron | 45.0% | |
| TCCTTGAGTAGTTTGGACAC+AGG | + | chr2_1:68315207-68315226 | Msa0220120:intron | 45.0% | |
| CCTTGAGTAGTTTGGACACA+GGG | + | chr2_1:68315208-68315227 | Msa0220120:intron | 45.0% | |
| TTGGACACAGGGATCTTCAA+AGG | + | chr2_1:68315219-68315238 | Msa0220120:intron | 45.0% | |
| TGGACACAGGGATCTTCAAA+GGG | + | chr2_1:68315220-68315239 | Msa0220120:intron | 45.0% | |
| !! | TACTTGGTGTAGTGGGAACA+AGG | + | chr2_1:68315294-68315313 | Msa0220120:intron | 45.0% |
| !! | ACTTGGTGTAGTGGGAACAA+GGG | + | chr2_1:68315295-68315314 | Msa0220120:intron | 45.0% |
| AGATAGAGGGGCTGAAACAA+GGG | + | chr2_1:68313397-68313416 | Msa0220120:intron | 45.0% | |
| GGCAACAAAACTAGGGTTTG+TGG | + | chr2_1:68313468-68313487 | Msa0220120:intron | 45.0% | |
| !! | GTTTGTGGGTTGATTCACCT+TGG | + | chr2_1:68313483-68313502 | Msa0220120:intron | 45.0% |
| GGATTGAGTCTCTTGGTTAC+GGG | + | chr2_1:68313518-68313537 | Msa0220120:intron | 45.0% | |
| GCTGGGATTTGGGTAGAATT+AGG | + | chr2_1:68313546-68313565 | Msa0220120:intron | 45.0% | |
| GGGATTTGGGTAGAATTAGG+CGG | + | chr2_1:68313549-68313568 | Msa0220120:intron | 45.0% | |
| GGATTTGGGTAGAATTAGGC+GGG | + | chr2_1:68313550-68313569 | Msa0220120:intron | 45.0% | |
| ! | CTCATCATATAGTGGAACGG+AGG | + | chr2_1:68313609-68313628 | Msa0220120:intron | 45.0% |
| TCCAAATTGACCTAGTCTGG+GGG | - | chr2_1:68313645-68313664 | None:intergenic | 45.0% | |
| GTCCAAATTGACCTAGTCTG+GGG | - | chr2_1:68313646-68313665 | None:intergenic | 45.0% | |
| GGTCCAAATTGACCTAGTCT+GGG | - | chr2_1:68313647-68313666 | None:intergenic | 45.0% | |
| TAGGTCAATTTGGACCGAAC+TGG | + | chr2_1:68313651-68313670 | Msa0220120:intron | 45.0% | |
| AGGTCAATTTGGACCGAACT+GGG | + | chr2_1:68313652-68313671 | Msa0220120:intron | 45.0% | |
| ATCCTCAACACGGTATCTGT+AGG | + | chr2_1:68316101-68316120 | Msa0220120:intron | 45.0% | |
| GCACAGCAACAAGCAAAGCA+TGG | + | chr2_1:68313100-68313119 | Msa0220120:CDS | 50.0% | |
| !! | TGCAAGTGTTGGAGTTGTGG+AGG | + | chr2_1:68313131-68313150 | Msa0220120:CDS | 50.0% |
| GAGATAGAGGGGCTGAAACA+AGG | + | chr2_1:68313396-68313415 | Msa0220120:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | + | chr2_1:68313524-68313543 | Msa0220120:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | + | chr2_1:68313641-68313660 | Msa0220120:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | - | chr2_1:68313648-68313667 | None:intergenic | 50.0% | |
| CAAGTACCATGGGTTCGAAG+TGG | + | chr2_1:68313874-68313893 | Msa0220120:intron | 50.0% | |
| GAAGGGTGAAGGTTCGTTAC+CGG | + | chr2_1:68313989-68314008 | Msa0220120:intron | 50.0% | |
| GCACAAGACAATGGTACTCC+TGG | - | chr2_1:68314057-68314076 | None:intergenic | 50.0% | |
| ATCACCGAGGCACAAGACAA+TGG | - | chr2_1:68314066-68314085 | None:intergenic | 50.0% | |
| AGTAGCAAAGGAACCAACCG+CGG | + | chr2_1:68314100-68314119 | Msa0220120:intron | 50.0% | |
| GGCCATCATGGAGCAACTTA+CGG | + | chr2_1:68314226-68314245 | Msa0220120:intron | 50.0% | |
| CTCCGTAAGTTGCTCCATGA+TGG | - | chr2_1:68314231-68314250 | None:intergenic | 50.0% | |
| GTTTCAAGAGGGAATGGTGG+AGG | + | chr2_1:68314482-68314501 | Msa0220120:intron | 50.0% | |
| ! | ATGGTGGAGGTAGAGGTAAC+CGG | + | chr2_1:68314495-68314514 | Msa0220120:intron | 50.0% |
| TCTGAGGGTTATGAGGATGC+AGG | + | chr2_1:68314623-68314642 | Msa0220120:intron | 50.0% | |
| TGAGGATGCAGGTGCTTTGA+TGG | + | chr2_1:68314634-68314653 | Msa0220120:intron | 50.0% | |
| !! | GTGTGCTGTTTGGAGGATGA+AGG | + | chr2_1:68314656-68314675 | Msa0220120:intron | 50.0% |
| GGTGATGTTTCTCACCTTGG+GGG | + | chr2_1:68314677-68314696 | Msa0220120:intron | 50.0% | |
| ATTCTTACCACCACCTCTCC+AGG | - | chr2_1:68314756-68314775 | None:intergenic | 50.0% | |
| ! | TCATGATCTACCGGTTGAGG+TGG | + | chr2_1:68314778-68314797 | Msa0220120:intron | 50.0% |
| GAGGTTGGAAGCTCAGCTTT+AGG | + | chr2_1:68314848-68314867 | Msa0220120:intron | 50.0% | |
| !! | GTTGGAAGCTCAGCTTTAGG+TGG | + | chr2_1:68314851-68314870 | Msa0220120:intron | 50.0% |
| GTACGACTATGGAGGACCTT+GGG | + | chr2_1:68314894-68314913 | Msa0220120:intron | 50.0% | |
| CTATGCTCTAGTGGTGAGCA+AGG | + | chr2_1:68314919-68314938 | Msa0220120:intron | 50.0% | |
| !! | CATGAAGACGGAAGGCATTC+CGG | + | chr2_1:68314950-68314969 | Msa0220120:intron | 50.0% |
| TCCAAGGGTGATTGGATGCA+AGG | + | chr2_1:68315017-68315036 | Msa0220120:intron | 50.0% | |
| ACCTTGCATCCAATCACCCT+TGG | - | chr2_1:68315021-68315040 | None:intergenic | 50.0% | |
| AGACATTCCGATGGCTGAAG+AGG | + | chr2_1:68315152-68315171 | Msa0220120:intron | 50.0% | |
| TCCGATGGCTGAAGAGGTTA+AGG | + | chr2_1:68315158-68315177 | Msa0220120:intron | 50.0% | |
| CCCTGTGTCCAAACTACTCA+AGG | - | chr2_1:68315211-68315230 | None:intergenic | 50.0% | |
| GGACACAGGGATCTTCAAAG+GGG | + | chr2_1:68315221-68315240 | Msa0220120:intron | 50.0% | |
| GACACAGGGATCTTCAAAGG+GGG | + | chr2_1:68315222-68315241 | Msa0220120:intron | 50.0% | |
| !! | TGTGGAGCTACTTGGTGTAG+TGG | + | chr2_1:68315286-68315305 | Msa0220120:intron | 50.0% |
| !! | GTGGAGCTACTTGGTGTAGT+GGG | + | chr2_1:68315287-68315306 | Msa0220120:intron | 50.0% |
| GAACAAGGGAAAGAGCAGCA+AGG | + | chr2_1:68315309-68315328 | Msa0220120:intron | 50.0% | |
| AAGAGCAGCAAGGTGGTTGA+TGG | + | chr2_1:68315319-68315338 | Msa0220120:intron | 50.0% | |
| !! | CAGCAAGGTGGTTGATGGTT+TGG | + | chr2_1:68315324-68315343 | Msa0220120:intron | 50.0% |
| TGGCACGTTGCTATCCATAG+TGG | - | chr2_1:68315469-68315488 | None:intergenic | 50.0% | |
| GATCTGCTTTCTACCCATCG+TGG | - | chr2_1:68315489-68315508 | None:intergenic | 50.0% | |
| CTGGAAAAATCGTGCCACGA+TGG | + | chr2_1:68315521-68315540 | Msa0220120:intron | 50.0% | |
| GAGATAGAGGGGCTGAAACA+AGG | + | chr2_1:68313396-68313415 | Msa0220120:intron | 50.0% | |
| AGTCTCTTGGTTACGGGAAG+AGG | + | chr2_1:68313524-68313543 | Msa0220120:intron | 50.0% | |
| TCCCCCAGACTAGGTCAATT+TGG | + | chr2_1:68313641-68313660 | Msa0220120:intron | 50.0% | |
| CGGTCCAAATTGACCTAGTC+TGG | - | chr2_1:68313648-68313667 | None:intergenic | 50.0% | |
| CACCTACAGATACCGTGTTG+AGG | - | chr2_1:68316106-68316125 | None:intergenic | 50.0% | |
| CTCAACACGGTATCTGTAGG+TGG | + | chr2_1:68316104-68316123 | Msa0220120:intron | 50.0% | |
| GGATGAGAAGAAGGCCAAAC+AGG | + | chr2_1:68316231-68316250 | Msa0220120:CDS | 50.0% | |
| CAAAGACTCCTCTGCCTGTT+TGG | - | chr2_1:68316248-68316267 | None:intergenic | 50.0% | |
| AACAGGCAGAGGAGTCTTTG+AGG | + | chr2_1:68316248-68316267 | Msa0220120:CDS | 50.0% | |
| ! | TGGATGGTGGCTGCAAGTGT+TGG | + | chr2_1:68313120-68313139 | Msa0220120:CDS | 55.0% |
| !! | GGCTGCAAGTGTTGGAGTTG+TGG | + | chr2_1:68313128-68313147 | Msa0220120:CDS | 55.0% |
| TGGCACGTTGCTTCTGATCG+TGG | - | chr2_1:68313224-68313243 | None:intergenic | 55.0% | |
| TCAGAAGCAACGTGCCACGA+TGG | + | chr2_1:68313227-68313246 | Msa0220120:intron | 55.0% | |
| GCCACGATGGAATCGTAACG+TGG | + | chr2_1:68313260-68313279 | Msa0220120:intron | 55.0% | |
| GCCACGTTACGATTCCATCG+TGG | - | chr2_1:68313264-68313283 | None:intergenic | 55.0% | |
| GGAATCGTAACGTGGCACGA+TGG | + | chr2_1:68313268-68313287 | Msa0220120:intron | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | + | chr2_1:68313528-68313547 | Msa0220120:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | + | chr2_1:68313529-68313548 | Msa0220120:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | + | chr2_1:68313535-68313554 | Msa0220120:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | + | chr2_1:68313536-68313555 | Msa0220120:intron | 55.0% | |
| ACAGTGGGCGCCAATTGTTG+AGG | - | chr2_1:68313832-68313851 | None:intergenic | 55.0% | |
| TCAACAATTGGCGCCCACTG+TGG | + | chr2_1:68313831-68313850 | Msa0220120:intron | 55.0% | |
| CAACAATTGGCGCCCACTGT+GGG | + | chr2_1:68313832-68313851 | Msa0220120:intron | 55.0% | |
| AACAATTGGCGCCCACTGTG+GGG | + | chr2_1:68313833-68313852 | Msa0220120:intron | 55.0% | |
| TTTGACCCTTGCCCCACAGT+GGG | - | chr2_1:68313847-68313866 | None:intergenic | 55.0% | |
| !! | GAAGACCGAGATGGTGGACA+AGG | + | chr2_1:68314031-68314050 | Msa0220120:intron | 55.0% |
| !! | GGCATCGATGTGGGCAAAGT+TGG | + | chr2_1:68314121-68314140 | Msa0220120:intron | 55.0% |
| GGTGGAGTCAAAGGCCATCA+TGG | + | chr2_1:68314214-68314233 | Msa0220120:intron | 55.0% | |
| ! | AGAGGGAATGGTGGAGGTAG+AGG | + | chr2_1:68314488-68314507 | Msa0220120:intron | 55.0% |
| TGGTGGAGGTAGAGGTAACC+GGG | + | chr2_1:68314496-68314515 | Msa0220120:intron | 55.0% | |
| CACTCAACATCAGCCTGGAG+AGG | + | chr2_1:68314740-68314759 | Msa0220120:intron | 55.0% | |
| TCAACATCAGCCTGGAGAGG+TGG | + | chr2_1:68314743-68314762 | Msa0220120:intron | 55.0% | |
| ! | TGATCTACCGGTTGAGGTGG+AGG | + | chr2_1:68314781-68314800 | Msa0220120:intron | 55.0% |
| CCTTGAACCTCCACCTCAAC+CGG | - | chr2_1:68314791-68314810 | None:intergenic | 55.0% | |
| GGATTTGAACACACCGGGAG+TGG | + | chr2_1:68314872-68314891 | Msa0220120:intron | 55.0% | |
| CTCCATAGTCGTACCACTCC+CGG | - | chr2_1:68314888-68314907 | None:intergenic | 55.0% | |
| GGTACGACTATGGAGGACCT+TGG | + | chr2_1:68314893-68314912 | Msa0220120:intron | 55.0% | |
| CCACTAGAGCATAGCACCCA+AGG | - | chr2_1:68314913-68314932 | None:intergenic | 55.0% | |
| ! | CCTTGGGTGCTATGCTCTAG+TGG | + | chr2_1:68314910-68314929 | Msa0220120:intron | 55.0% |
| GAAGGCGGAAGACATTCCGA+TGG | + | chr2_1:68315143-68315162 | Msa0220120:intron | 55.0% | |
| ACAGGGATCTTCAAAGGGGG+CGG | + | chr2_1:68315225-68315244 | Msa0220120:intron | 55.0% | |
| CAAGGGAAAGAGCAGCAAGG+TGG | + | chr2_1:68315312-68315331 | Msa0220120:intron | 55.0% | |
| TGGCACGTTGCTTCTGATCG+TGG | - | chr2_1:68313224-68313243 | None:intergenic | 55.0% | |
| TCAGAAGCAACGTGCCACGA+TGG | + | chr2_1:68313227-68313246 | Msa0220120:intron | 55.0% | |
| ! | TGGAGAGCAACGTGCCACTA+TGG | + | chr2_1:68315452-68315471 | Msa0220120:intron | 55.0% |
| TGGATAGCAACGTGCCACGA+TGG | + | chr2_1:68315472-68315491 | Msa0220120:intron | 55.0% | |
| GGATAGCAACGTGCCACGAT+GGG | + | chr2_1:68315473-68315492 | Msa0220120:intron | 55.0% | |
| GCAGATCCTGATGCAAGCAC+TGG | + | chr2_1:68315502-68315521 | Msa0220120:intron | 55.0% | |
| GCCACGATGGAATCGTAACG+TGG | + | chr2_1:68313260-68313279 | Msa0220120:intron | 55.0% | |
| GCCACGTTACGATTCCATCG+TGG | - | chr2_1:68313264-68313283 | None:intergenic | 55.0% | |
| GGAATCGTAACGTGGCACGA+TGG | + | chr2_1:68313268-68313287 | Msa0220120:intron | 55.0% | |
| TCTTGGTTACGGGAAGAGGC+TGG | + | chr2_1:68313528-68313547 | Msa0220120:intron | 55.0% | |
| CTTGGTTACGGGAAGAGGCT+GGG | + | chr2_1:68313529-68313548 | Msa0220120:intron | 55.0% | |
| TACGGGAAGAGGCTGGGATT+TGG | + | chr2_1:68313535-68313554 | Msa0220120:intron | 55.0% | |
| ACGGGAAGAGGCTGGGATTT+GGG | + | chr2_1:68313536-68313555 | Msa0220120:intron | 55.0% | |
| GAAGAAGGCCAAACAGGCAG+AGG | + | chr2_1:68316237-68316256 | Msa0220120:CDS | 55.0% | |
| TGGCACGTTGCTCTCCATCG+TGG | - | chr2_1:68313244-68313263 | None:intergenic | 60.0% | |
| TGGAGAGCAACGTGCCACGA+TGG | + | chr2_1:68313247-68313266 | Msa0220120:intron | 60.0% | |
| GTGGCACGATGGTACGCTGA+AGG | + | chr2_1:68313279-68313298 | Msa0220120:intron | 60.0% | |
| CTTTGACCCTTGCCCCACAG+TGG | - | chr2_1:68313848-68313867 | None:intergenic | 60.0% | |
| CACTGTGGGGCAAGGGTCAA+AGG | + | chr2_1:68313846-68313865 | Msa0220120:intron | 60.0% | |
| ACCGGTCACCATGACACGAG+CGG | + | chr2_1:68314007-68314026 | Msa0220120:intron | 60.0% | |
| TCCGCTCGTGTCATGGTGAC+CGG | - | chr2_1:68314011-68314030 | None:intergenic | 60.0% | |
| GGTCTTCTCCGCTCGTGTCA+TGG | - | chr2_1:68314018-68314037 | None:intergenic | 60.0% | |
| ACGAGCGGAGAAGACCGAGA+TGG | + | chr2_1:68314022-68314041 | Msa0220120:intron | 60.0% | |
| AGCGGAGAAGACCGAGATGG+TGG | + | chr2_1:68314025-68314044 | Msa0220120:intron | 60.0% | |
| !! | CCTGGCCTTGTCCACCATCT+CGG | - | chr2_1:68314039-68314058 | None:intergenic | 60.0% |
| !! | AACCAACCGCGGCATCGATG+TGG | + | chr2_1:68314111-68314130 | Msa0220120:intron | 60.0% |
| !! | ACCAACCGCGGCATCGATGT+GGG | + | chr2_1:68314112-68314131 | Msa0220120:intron | 60.0% |
| CTTTGCCCACATCGATGCCG+CGG | - | chr2_1:68314120-68314139 | None:intergenic | 60.0% | |
| GGTGGAGGTAGAGGTAACCG+GGG | + | chr2_1:68314497-68314516 | Msa0220120:intron | 60.0% | |
| CTCTACAGGCATCACCCCCA+AGG | - | chr2_1:68314694-68314713 | None:intergenic | 60.0% | |
| TGGGGGTGATGCCTGTAGAG+CGG | + | chr2_1:68314694-68314713 | Msa0220120:intron | 60.0% | |
| ACATCAGCCTGGAGAGGTGG+TGG | + | chr2_1:68314746-68314765 | Msa0220120:intron | 60.0% | |
| CCGGTTGAGGTGGAGGTTCA+AGG | + | chr2_1:68314788-68314807 | Msa0220120:intron | 60.0% | |
| CACCGGGAGTGGTACGACTA+TGG | + | chr2_1:68314883-68314902 | Msa0220120:intron | 60.0% | |
| CGGGAGTGGTACGACTATGG+AGG | + | chr2_1:68314886-68314905 | Msa0220120:intron | 60.0% | |
| !! | GAAGACGGAAGGCATTCCGG+AGG | + | chr2_1:68314953-68314972 | Msa0220120:intron | 60.0% |
| GGATCTTCAAAGGGGGCGGA+AGG | + | chr2_1:68315229-68315248 | Msa0220120:intron | 60.0% | |
| TGGCACGTTGCTCTCCATCG+TGG | - | chr2_1:68313244-68313263 | None:intergenic | 60.0% | |
| GTGGCACGATGGTACGCTGA+AGG | + | chr2_1:68313279-68313298 | Msa0220120:intron | 60.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | + | chr2_1:68313632-68313651 | Msa0220120:intron | 65.0% | |
| !! | CCGAGATGGTGGACAAGGCC+AGG | + | chr2_1:68314036-68314055 | Msa0220120:intron | 65.0% |
| GGGTGATGCCTGTAGAGCGG+TGG | + | chr2_1:68314697-68314716 | Msa0220120:intron | 65.0% | |
| CCAGACGACCACCGCTCTAC+AGG | - | chr2_1:68314708-68314727 | None:intergenic | 65.0% | |
| CCTGTAGAGCGGTGGTCGTC+TGG | + | chr2_1:68314705-68314724 | Msa0220120:intron | 65.0% | |
| GCTGCTCTCTCCCCCAGACT+AGG | + | chr2_1:68313632-68313651 | Msa0220120:intron | 65.0% | |
| TTGGCGCCCACTGTGGGGCA+AGG | + | chr2_1:68313838-68313857 | Msa0220120:intron | 70.0% | |
| TGGCGCCCACTGTGGGGCAA+GGG | + | chr2_1:68313839-68313858 | Msa0220120:intron | 70.0% | |
| GCCCACATCGATGCCGCGGT+TGG | - | chr2_1:68314116-68314135 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 68313099 | 68316306 | 68313099 | ID=Msa0220120;Name=Msa0220120 |
| chr2_1 | mRNA | 68313099 | 68316306 | 68313099 | ID=Msa0220120-mRNA-1;Parent=Msa0220120;Name=Msa0220120-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|1|0|0|2|0|63 |
| chr2_1 | exon | 68313099 | 68313171 | 68313099 | ID=Msa0220120-mRNA-1:exon:19348;Parent=Msa0220120-mRNA-1 |
| chr2_1 | exon | 68316188 | 68316306 | 68316188 | ID=Msa0220120-mRNA-1:exon:19349;Parent=Msa0220120-mRNA-1 |
| chr2_1 | CDS | 68313099 | 68313171 | 68313099 | ID=Msa0220120-mRNA-1:cds;Parent=Msa0220120-mRNA-1 |
| chr2_1 | CDS | 68316188 | 68316306 | 68316188 | ID=Msa0220120-mRNA-1:cds;Parent=Msa0220120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
